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Conserved domains on  [gi|896565488|ref|WP_049461853|]
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MULTISPECIES: TonB-dependent siderophore receptor [Stenotrophomonas]

Protein Classification

TonB-dependent receptor( domain architecture ID 11469157)

TonB-dependent receptor interacts with outer membrane receptor proteins that carry out high-affinity binding and energy-dependent uptake of specific substrates into the periplasmic space

CATH:  2.40.170.20
Gene Ontology:  GO:0015343|GO:0009279|GO:0038023
PubMed:  14665678|12409204|15993072|21455261
SCOP:  4003084
TCDB:  1.B.14

Graphical summary

 Zoom to residue level

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List of domain hits

 Name Accession Description Interval E-value
Fiu COG4774
Outer membrane receptor for monomeric catechols [Inorganic ion transport and metabolism];
69-727 4.20e-150

Outer membrane receptor for monomeric catechols [Inorganic ion transport and metabolism];


:

Pssm-ID: 443806 [Multi-domain]  Cd Length: 639  Bit Score: 451.25  E-value: 4.20e-150
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 896565488  69 KDTPASVNVLERNYLDRRQVRSLSELASNDASLGDAYAPVGYYQNIAIRGFalDAATGYRFNGLSIAGEQRLALENVQSV 148
Cdd:COG4774    7 LDTPQSVTVVTRELIEDQGATSLADALRNVPGVTFGAGEGGNGDSFSIRGF--SASGDIYVDGLRDPGQYRRDTFNLERV 84

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 896565488 149 EILKGEAGLAAGVMAPGGIINYIGKRP--AEVRTATLGTDSEGSRYVAVDVGHWITPRFGLRLNAAWDSSNSYVEHADGR 226
Cdd:COG4774   85 EVLKGPASVLYGRGSPGGVINLVTKRPtdEPFTEVTLTYGSDGQRRATLDVNGPLGDDLAYRLNGMYRDSDSYRDGVDND 164

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 896565488 227 RNFYSLAADWLIGERGKLEVDANYQTSSQRSVSGYQLLGARElPHGVDREFLLGyQPWQRpVDIASTNITALHTYDFNDT 306
Cdd:COG4774  165 RWGIAPSLTWRLGDRTRLTLDYEYQDDDRTPDYGVPAVANGR-PVDVDRSTFYG-QPDDY-SDSETDSATLRLEHDFNDN 241

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 896565488 307 WQSRVSVGHSRSVIDDNVAFAygcyyaaqcadgsvpgNYFAPNGDYDVYDYRSpDDTRRNQQARAELRGRFETGSVGHEL 386
Cdd:COG4774  242 WTLRNALRYSDYDRDYRNTYP----------------TGGNATGTVTRSAYRR-DQDNDTLSNQTDLTGKFDTGGVKHTL 304

                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 896565488 387 TIGADYFRRTVDKRP-SVNEYVGTSNIHDAQVPVFAPSPKMPGPSaRRLDSRQTAFFALDRMSFGDDWQWLAGGRFVRLD 465
Cdd:COG4774  305 LAGVEYSREDSDNARySGGGTAPTVNLYNPVYGAPVTGPTLGGAD-NDSRTDTTGLYLQDTISLTDRWSLLAGLRYDRFD 383

                        410       420       430       440       450       460       470       480
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 896565488 466 EHAYDKRGNPQRHSR-LSRFLPQTAVVWKATDQLNAYASYVRGISLGQEAPFWTSNADTFLPSvQSRQLEVGVKY-VPVE 543
Cdd:COG4774  384 TDYTDRTTGATTSSYdDSAFSPRAGLVYKPTPNLSLYASYSTSFNPGGGAPSLSNAGQALDPE-KSRQYEVGVKWdLLDG 462

                        490       500       510       520       530       540       550       560
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 896565488 544 ALTLGAAVFRISQPYQYAkPDSSDvGYTFVEEGTQTHTGLELTANGQLTDALQIVASASVLQARARDTGTPAYAGNQLVN 623
Cdd:COG4774  463 RLSLTAALFRIEKTNVRT-TDPAN-PGVYVQTGEQRSRGVELEATGELTPGWSVLAGYTYLDAEITKSANAANVGNRLPN 540

                        570       580       590       600       610       620       630       640
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 896565488 624 VPKVRASVHVAYALPfVQGLDVTGGWRYAGANVARADGGVRAPDYSVFDAGLRFQHRlheRAVTWNLSVDNVFNRFYWRd 703
Cdd:COG4774  541 VPRHSASLWTTYDLP-LPGLTLGGGVRYVGSRYADAANTVKLPSYTRFDAGASYRLN---KNLTLRLNVNNLTDKRYYA- 615

                        650       660
                 ....*....|....*....|....
gi 896565488 704 tgSSGGDYYLFPGAPRQARLSVTF 727
Cdd:COG4774  616 --SAYGSGYVTPGAPRTVLLSASY 637
 
Name Accession Description Interval E-value
Fiu COG4774
Outer membrane receptor for monomeric catechols [Inorganic ion transport and metabolism];
69-727 4.20e-150

Outer membrane receptor for monomeric catechols [Inorganic ion transport and metabolism];


Pssm-ID: 443806 [Multi-domain]  Cd Length: 639  Bit Score: 451.25  E-value: 4.20e-150
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 896565488  69 KDTPASVNVLERNYLDRRQVRSLSELASNDASLGDAYAPVGYYQNIAIRGFalDAATGYRFNGLSIAGEQRLALENVQSV 148
Cdd:COG4774    7 LDTPQSVTVVTRELIEDQGATSLADALRNVPGVTFGAGEGGNGDSFSIRGF--SASGDIYVDGLRDPGQYRRDTFNLERV 84

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 896565488 149 EILKGEAGLAAGVMAPGGIINYIGKRP--AEVRTATLGTDSEGSRYVAVDVGHWITPRFGLRLNAAWDSSNSYVEHADGR 226
Cdd:COG4774   85 EVLKGPASVLYGRGSPGGVINLVTKRPtdEPFTEVTLTYGSDGQRRATLDVNGPLGDDLAYRLNGMYRDSDSYRDGVDND 164

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 896565488 227 RNFYSLAADWLIGERGKLEVDANYQTSSQRSVSGYQLLGARElPHGVDREFLLGyQPWQRpVDIASTNITALHTYDFNDT 306
Cdd:COG4774  165 RWGIAPSLTWRLGDRTRLTLDYEYQDDDRTPDYGVPAVANGR-PVDVDRSTFYG-QPDDY-SDSETDSATLRLEHDFNDN 241

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 896565488 307 WQSRVSVGHSRSVIDDNVAFAygcyyaaqcadgsvpgNYFAPNGDYDVYDYRSpDDTRRNQQARAELRGRFETGSVGHEL 386
Cdd:COG4774  242 WTLRNALRYSDYDRDYRNTYP----------------TGGNATGTVTRSAYRR-DQDNDTLSNQTDLTGKFDTGGVKHTL 304

                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 896565488 387 TIGADYFRRTVDKRP-SVNEYVGTSNIHDAQVPVFAPSPKMPGPSaRRLDSRQTAFFALDRMSFGDDWQWLAGGRFVRLD 465
Cdd:COG4774  305 LAGVEYSREDSDNARySGGGTAPTVNLYNPVYGAPVTGPTLGGAD-NDSRTDTTGLYLQDTISLTDRWSLLAGLRYDRFD 383

                        410       420       430       440       450       460       470       480
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 896565488 466 EHAYDKRGNPQRHSR-LSRFLPQTAVVWKATDQLNAYASYVRGISLGQEAPFWTSNADTFLPSvQSRQLEVGVKY-VPVE 543
Cdd:COG4774  384 TDYTDRTTGATTSSYdDSAFSPRAGLVYKPTPNLSLYASYSTSFNPGGGAPSLSNAGQALDPE-KSRQYEVGVKWdLLDG 462

                        490       500       510       520       530       540       550       560
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 896565488 544 ALTLGAAVFRISQPYQYAkPDSSDvGYTFVEEGTQTHTGLELTANGQLTDALQIVASASVLQARARDTGTPAYAGNQLVN 623
Cdd:COG4774  463 RLSLTAALFRIEKTNVRT-TDPAN-PGVYVQTGEQRSRGVELEATGELTPGWSVLAGYTYLDAEITKSANAANVGNRLPN 540

                        570       580       590       600       610       620       630       640
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 896565488 624 VPKVRASVHVAYALPfVQGLDVTGGWRYAGANVARADGGVRAPDYSVFDAGLRFQHRlheRAVTWNLSVDNVFNRFYWRd 703
Cdd:COG4774  541 VPRHSASLWTTYDLP-LPGLTLGGGVRYVGSRYADAANTVKLPSYTRFDAGASYRLN---KNLTLRLNVNNLTDKRYYA- 615

                        650       660
                 ....*....|....*....|....
gi 896565488 704 tgSSGGDYYLFPGAPRQARLSVTF 727
Cdd:COG4774  616 --SAYGSGYVTPGAPRTVLLSASY 637
TonB-siderophor TIGR01783
TonB-dependent siderophore receptor; This subfamily model encompasses a wide variety of ...
 70-727 8.10e-105

TonB-dependent siderophore receptor; This subfamily model encompasses a wide variety of TonB-dependent outer membrane siderophore receptors. It has no overlap with TonB receptors known to transport other substances, but is likely incomplete due to lack of characterizations. It is likely that genuine siderophore receptors will be identified which score below the noise cutoff to this model at which point the model should be updated. [Transport and binding proteins, Cations and iron carrying compounds, Transport and binding proteins, Porins]


Pssm-ID: 273805 [Multi-domain]  Cd Length: 651  Bit Score: 334.38  E-value: 8.10e-105
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 896565488   70 DTPASVNVLERNYLDRRQVRSLSELASNDASLGDAYAP-VGYYQNIAIRGFAL-DAATGYRFNGLSIAGEQRLA---LEN 144
Cdd:TIGR01783   1 DIPQSVSVITRQELEDQQAGSLSEALQRVPGVVVGGSGgTTQFGNITIRGFGLeVDIDNVYLDGVPLLSRGNLAivdPAM 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 896565488  145 VQSVEILKGEAGLAAGVMAPGGIINYIGKRP--AEVRTATLGTDSEGSRYVAVDVGHWITP--RFGLRLNAAWDSSNSYV 220
Cdd:TIGR01783  81 VERVEVLRGPASLLYGGSAPGGVINIVTKRPqdEPKGSVTFGAGTRSGYRTAFDLGGPLGAdgTFRGRLNGARQDGDSFY 160

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 896565488  221 EHADGRRNFYSLAADWLIGERGKLEVDANYQTSSQRSVSGYQLLGARELPHGVDREFLLGYQPWQRPVDIASTNITALHT 300
Cdd:TIGR01783 161 DGAGEETRLGATATDWQLDDRTLLRLGAYYQKERDRGGYGGLPASGGTSGRDLSSDRYLGTSSNRNYDDREYLSYGLSLE 240

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 896565488  301 YDFNDTWQSRVSVGHSRSVIDDNVAFAYGCYyaaqcadgsvpgnyfAPNGDYDVYDYRSPDDTRRNQqARAELRGRFETG 380
Cdd:TIGR01783 241 YQFNDVWTGKQNLRYSYFDTDSNQVQASGYS---------------SDGGLFGRSLTVVNVKQDRVQ-IDAGLDGEFETG 304

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 896565488  381 SVGHELTIGADYFRRTVDKRPSVNEYVGTSNIHDAQVPVFAPSPKMPgpSARRLDSRQTAF--FALDRMSFGDDWQWLAG 458
Cdd:TIGR01783 305 PIEHDLLLGVSYGQRTTNRFNNTGYPSDNIYSLTATSSARTDIGDSP--KDRALSSTTKALngVALQRILLADKWTLTLG 382

                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 896565488  459 GRFVRLDEHAYDKRGNPQRHSRLSRFLPQTAVVWKATDQLNAYASYVRGISLGQEAPFWTSNADTFLPSVQSRQLEVGVK 538
Cdd:TIGR01783 383 GRYDSVDVKSNNGVAGSTGKRDDSQFTPSLGVAYKPTDDWSLYASYAESFKPGGYYPKGAGNSGDILEPEKGKNYELGVR 462

                         490       500       510       520       530       540       550       560
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 896565488  539 YVPVEALTLGAAVFRISQPYQYAKpdSSDVGYTFVEEGTQTHTGLELTANGQLTDALQIVASASVLQARARDTGTPAYAG 618
Cdd:TIGR01783 463 YDLGDSLLATAALFRITKDNQLVQ--DPVNGTFSVNAGKTRNRGVELEARGYLTPGLSLSAGYTYTDAEFTEDTNGDTQG 540

                         570       580       590       600       610       620       630       640
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 896565488  619 NQLVNVPKVRASVHVAYALPFVQ-GLDVTGGWRYAGANVARADGGVRAPDYSVFDAGLRFQHRLHERaVTWNLSVDNVFN 697
Cdd:TIGR01783 541 NTVPFVPKHTASLWASYAPPVGDnGLTLGGGVQYTGKAYVDGGNTGKVPSYTVVDLSVRYDLTKKKN-LTLALNVNNLFD 619

                         650       660       670
                  ....*....|....*....|....*....|
gi 896565488  698 RFYWRDTGSSGGDYYLFPGAPRQARLSVTF 727
Cdd:TIGR01783 620 RDYYTSGYRWGPSAYIYPGAPRTVGLSVSY 649
ligand_gated_channel cd01347
TonB dependent/Ligand-Gated channels are created by a monomeric 22 strand (22,24) ...
 74-727 3.28e-75

TonB dependent/Ligand-Gated channels are created by a monomeric 22 strand (22,24) anti-parallel beta-barrel. Ligands apparently bind to the large extracellular loops. The N-terminal 150-200 residues form a plug from the periplasmic end of barrel. Energy (proton-motive force) and TonB-dependent conformational alteration of channel (parts of plug, and loops 7 and 8) allow passage of ligand. FepA residues 12-18 form the TonB box, which mediates the interaction with the TonB-containing inner membrane complex. TonB preferentially interacts with ligand-bound receptors. Transport thru the channel may resemble passage thru an air lock. In this model, ligand binding leads to closure of the extracellular end of pore, then a TonB-mediated signal facillitates opening of the interior side of pore, deforming the N-terminal plug and allowing passage of the ligand to the periplasm. Such a mechanism would prevent the free diffusion of small molecules thru the pore.


Pssm-ID: 238657 [Multi-domain]  Cd Length: 635  Bit Score: 255.07  E-value: 3.28e-75
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 896565488  74 SVNVLERNYLDRRQVRSLSELASNDASLGDAYAPVGYYQNIAIRGFALDAaTGYRFNGLSIAGE--------QRLALENV 145
Cdd:cd01347    1 SVSVITAEDIEKQPATSLADLLRRIPGVSVTRGGGGGGSTISIRGFGPDR-TLVLVDGLPLASSnygrgvdlNTIPPELI 79

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 896565488 146 QSVEILKGEAGLAAGVMAPGGIINYIGKRPAEV----RTATLGTDSEGSRY-VAVDVG--HWITPRFGLRLNAAWDSSNS 218
Cdd:cd01347   80 ERVEVLKGPSSALYGSGAIGGVVNIITKRPTDEfggsVTAGYGSDNSGSSGgGGFDVSgaLADDGAFGARLYGAYRDGDG 159

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 896565488 219 YVEHADG------RRNFYSLAADWLIGERGKLEVDANYQTSSQRSVSGYQLLGARELPHGVD-REFLLGYQPWQRPvDIA 291
Cdd:cd01347  160 TIDGDGQaddsdeERYNVAGKLDWRPDDDTRLTLDAGYQDQDADGPGGTLPANGTGSSLGGGpSSNTNGDRDWDYR-DRY 238

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 896565488 292 STNITALHTYDFND-TWQSRVSVGHSRSVIDDNVAFAYGcyyaaqcadgsvpgNYFAPNGDYDVYDYRSPDDTRRNQqAR 370
Cdd:cd01347  239 RKRASLGLEHDLNDtGWTLRANLSYSYTDNDGDPLILNG--------------GNNAAGGDLGRSGYSSERDTTQLG-FD 303

                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 896565488 371 AELRGRFETGSVGHELTIGADYFRRtvdkrpsvneyvgtsnihdaqvpvfapspkmpgpsarRLDSRQTAFFALDRMSFG 450
Cdd:cd01347  304 AGLNAPFGTGPVAHTLTLGVEYRRE-------------------------------------ELDEKQTALYAQDTIELT 346

                        410       420       430       440       450       460       470       480
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 896565488 451 DDWQWLAGGRFVRLDEHAYD-KRGNPQRHSRLSRFLPQTAVVWKATDQLNAYASYVRGISLGQEAPFWTSNADTFLPSV- 528
Cdd:cd01347  347 DDLTLTLGLRYDHYDQDSKDtIAGGTTAKKSYSHWSPSLGLVYKLTDGLSLYASYSQGFRAPSLGELYGGGSHGGTAAVg 426

                        490       500       510       520       530       540       550       560
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 896565488 529 -------QSRQLEVGVKYVPVEALTLGAAVFRISQP-YQYAKPDSSDVG--YTFVEEGTQTHTGLELTANGQLTDALQIV 598
Cdd:cd01347  427 npnlkpeKSKQYELGLKYDPGDGLTLSAALFRIDIKnEIVSTPTNTGLGlvTVYVNGGKARIRGVELEASYDLTDGLGLT 506

                        570       580       590       600       610       620       630       640
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 896565488 599 ASASVLQARARDTGTpAYAGNQLVNVPKVRASVHVAYALPFvQGLDVTGGWRYAGA---NVARADGGVRAPDYSVFDAGL 675
Cdd:cd01347  507 GSYTYTDTEVKRTDG-ATTGNRLPGIPKHTANLGLDYELPD-EGLTAGGGVRYRGKqyaDTANGNNTVKVPGYTLVDLSA 584

                        650       660       670       680       690
                 ....*....|....*....|....*....|....*....|....*....|..
gi 896565488 676 RFQHRLHeraVTWNLSVDNVFNRFYWRDTGSSGGDYYLFPGAPRQARLSVTF 727
Cdd:cd01347  585 SYQFTKN---LTLRLGVNNLFDKDYYTSLSVRGSGLYGYYGPGRTYYLSVSY 633
TonB_dep_Rec pfam00593
TonB dependent receptor; This model now only covers the conserved part of the barrel structure.
 237-727 3.45e-39

TonB dependent receptor; This model now only covers the conserved part of the barrel structure.


Pssm-ID: 395474 [Multi-domain]  Cd Length: 475  Bit Score: 151.46  E-value: 3.45e-39
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 896565488  237 LIGERGKLEVDANYQTSSQRSVSGYQLLGARELPHGVDREFLLGYQPWQRpVDIASTNITALHTYDFNDTWQSRVSVGHs 316
Cdd:pfam00593   8 LLGDDTLLTLGYDYSRYTDGLDLGLTLDGYGNDGGYLGDRPLYYGRDYSD-TDRKRLSLGYDYDLGDGLSWLSTLRLGL- 85

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 896565488  317 rsviddnvafaygcYYAAQCADGSVPGNYFAPNGDYDVYD-YRSPDDTRRNQQARAELRGRFETGsvGHELTIGADYFRR 395
Cdd:pfam00593  86 --------------RYSSLDGDYTSNSSGLSGAGDYLSDDrLYGLYGLDGDLELSLDLSHDLLLG--VELRTAGLDYRRL 149

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 896565488  396 TVDKRPSVNEYVGTSNihdaqvpvfapspkmpgpSARRLDSRQTAFFALDRMSFGDDWQWLAGGRFVRLDEHAYDKRGNP 475
Cdd:pfam00593 150 DDDAYDPYDPANPSSS------------------SYSDTTTDSYGLYLQDNIKLTDRLTLTLGLRYDHYSTDGDDGNGGG 211

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 896565488  476 QRHSR-LSRFLPQTAVVWKATDQLNAYASYVRGI----------SLGQEAPFWTSNADTFLPSVQSRQLEVGVKYVPvEA 544
Cdd:pfam00593 212 DNFSRsYSAFSPRLGLVYKPTDNLSLYASYSRGFrapslgelygSGSGGGGGAVAGGNPDLKPETSDNYELGLKYDD-GR 290

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 896565488  545 LTLGAAVFRISQP----YQYAKPDSSDVGYTFVEEGTQTHTGLELTANGQLTDALQIVASASVLqaRARDTGTPAYAGNQ 620
Cdd:pfam00593 291 LSLSLALFYIDIKnlitSDPDGPGLGGTVYTYTNVGKARIRGVELELSGRLWGLGLSGGGYTYT--DADDDADADDTGNP 368

                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 896565488  621 LVNVPKVRASVHVAYALPfVQGLDVTGGWRYAG---ANVARADGGVRAPDYSVFDAGLRFQHRLHeraVTWNLSVDNVFN 697
Cdd:pfam00593 369 LPNVPRHTANLGLTYDFP-LGGWGARLGARYVGsgeRRYGDAANTFKTPGYTLVDLSAGYRLNKN---LTLRLGVNNLFD 444

                         490       500       510
                  ....*....|....*....|....*....|
gi 896565488  698 RFYWRDTGSSGGDYYLFPGAPRQARLSVTF 727
Cdd:pfam00593 445 KYYKRYYSSGGGNLGGYPGPGRTFYLGLSY 474
PRK14050 PRK14050
TonB-dependent siderophore receptor;
39-700 4.10e-35

TonB-dependent siderophore receptor;


Pssm-ID: 237595 [Multi-domain]  Cd Length: 728  Bit Score: 142.63  E-value: 4.10e-35
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 896565488  39 SPTELAAVRVQAGKPKAD--TSRVNAF-----GGGSWKDT-----PASVNVLERNYLDRRQV-RSLSE-LASNDASLGDA 104
Cdd:PRK14050  35 NTTQLETIVVEGGNAASAtaTGPVDGYvakatATGSKTDTpiteiPQSVSVVGRQEMDDRGVtNKVDEaLRYTPGVLSQP 114

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 896565488 105 YAPVGYYQNIAIRGFalDAA-TGYRFNGLSIA----GEQRLALENVQSVEILKGEAGLAAGVMAPGGIINYIGKRPAE-- 177
Cdd:PRK14050 115 FGTDGDTDWFYIRGF--DATqTGVFLDGLNLFsygfGGFQIDPFMLERVEVLKGPASVLYGGSNPGGIVNMVSKRPLDep 192

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 896565488 178 VRTATLGTDSEGSRYVAVDVGHWITPR--FGLRLNAAWDSSNSYVEHADGRRNFYSLAADWLIGERGKLEVDANYQTSSQ 255
Cdd:PRK14050 193 LYYTEIGINSYGNAFTGFDVGDKLSDDgtVRYRVTGKVAGGDNYSDYSEDLRGFIMPQITYAPDDATSLTVYGYLSGLDQ 272

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 896565488 256 RSVSGYQL--LGARE-LPHG-VDREFLLGyqpwQRPVDIASTNITALHT---YDFNDTWQSRVSVGHSRSVIDDNVAFAY 328
Cdd:PRK14050 273 VHVGNGFLpyVGTVVdAPFGkIDRDAFYG----EPDIDNGSYAQQMLGYefsHEFDNGWTFSQNARYGHLHKHEKGPYTY 348

                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 896565488 329 GCYYAAQCADGSVPGNYFAPNGDydvYDYRSPDDTRrnqQARAELRGRFETGSVGHELTIGADYFRRTVDKRpsvnEYVG 408
Cdd:PRK14050 349 GYVGGATGLPDPTGPDYMLNRIG---FEHRSKVDSF---SIDNRLEGEFDTGALTHNLLFGLDYKYYRLDQV----QACC 418

                        410       420       430       440       450       460       470       480
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 896565488 409 TSNIHDAQVPVFApSPKmpGPSARRLDS----RQTAFFALDRMSFGDDWQWLAGGRFVRLDEHAyDKRGNPQRHSRLSRF 484
Cdd:PRK14050 419 GATPISATNPVYG-TTQ--GANFVYLDQiltqQQIGIYAQDQIRFGDGWLVTLNGRYDYVDTDS-DARIGTSYESNDGAL 494

                        490       500       510       520       530       540       550       560
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 896565488 485 LPQTAVVWKATDQLNAYASYvrgislgqeAPFW-----TSNADTFLPSVQSRQLEVGVKYVP--VEALtLGAAVFRISQp 557
Cdd:PRK14050 495 SGRAGLAYEFDNGLTPYVSA---------ATFFnplvgTLASGPPLKPEEGEQYEAGIKYEPsfIDGL-ITASVFQITK- 563

                        570       580       590       600       610       620       630       640
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 896565488 558 yqyaKPDSSDVGYTFVEE--GTQTHTGLELTANGQLTDALQIVASASVLQARARDTGTPAYAGNQLVNVPKVRASVHVAY 635
Cdd:PRK14050 564 ----KNVTVTDPLTFASTqlGEVRSRGFELEGKVNLDDNWKALASFTYTDLEITEDANPSLIGNSPYLVPETQASLWLDY 639

                        650       660       670       680       690       700
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 896565488 636 ALP--FVQGLDVTGGWRYAGANVARADGGVRAPDYSVFDAGLRFQhrlhERAVTWNLSVDNVFNRFY 700
Cdd:PRK14050 640 AVTdgAFEGVSLGAGVRYQGESWADEANTLKVPAATLFDAAIRYE----KNDWGASLNVANLFDKEY 702
 
Name Accession Description Interval E-value
Fiu COG4774
Outer membrane receptor for monomeric catechols [Inorganic ion transport and metabolism];
69-727 4.20e-150

Outer membrane receptor for monomeric catechols [Inorganic ion transport and metabolism];


Pssm-ID: 443806 [Multi-domain]  Cd Length: 639  Bit Score: 451.25  E-value: 4.20e-150
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 896565488  69 KDTPASVNVLERNYLDRRQVRSLSELASNDASLGDAYAPVGYYQNIAIRGFalDAATGYRFNGLSIAGEQRLALENVQSV 148
Cdd:COG4774    7 LDTPQSVTVVTRELIEDQGATSLADALRNVPGVTFGAGEGGNGDSFSIRGF--SASGDIYVDGLRDPGQYRRDTFNLERV 84

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 896565488 149 EILKGEAGLAAGVMAPGGIINYIGKRP--AEVRTATLGTDSEGSRYVAVDVGHWITPRFGLRLNAAWDSSNSYVEHADGR 226
Cdd:COG4774   85 EVLKGPASVLYGRGSPGGVINLVTKRPtdEPFTEVTLTYGSDGQRRATLDVNGPLGDDLAYRLNGMYRDSDSYRDGVDND 164

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 896565488 227 RNFYSLAADWLIGERGKLEVDANYQTSSQRSVSGYQLLGARElPHGVDREFLLGyQPWQRpVDIASTNITALHTYDFNDT 306
Cdd:COG4774  165 RWGIAPSLTWRLGDRTRLTLDYEYQDDDRTPDYGVPAVANGR-PVDVDRSTFYG-QPDDY-SDSETDSATLRLEHDFNDN 241

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 896565488 307 WQSRVSVGHSRSVIDDNVAFAygcyyaaqcadgsvpgNYFAPNGDYDVYDYRSpDDTRRNQQARAELRGRFETGSVGHEL 386
Cdd:COG4774  242 WTLRNALRYSDYDRDYRNTYP----------------TGGNATGTVTRSAYRR-DQDNDTLSNQTDLTGKFDTGGVKHTL 304

                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 896565488 387 TIGADYFRRTVDKRP-SVNEYVGTSNIHDAQVPVFAPSPKMPGPSaRRLDSRQTAFFALDRMSFGDDWQWLAGGRFVRLD 465
Cdd:COG4774  305 LAGVEYSREDSDNARySGGGTAPTVNLYNPVYGAPVTGPTLGGAD-NDSRTDTTGLYLQDTISLTDRWSLLAGLRYDRFD 383

                        410       420       430       440       450       460       470       480
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 896565488 466 EHAYDKRGNPQRHSR-LSRFLPQTAVVWKATDQLNAYASYVRGISLGQEAPFWTSNADTFLPSvQSRQLEVGVKY-VPVE 543
Cdd:COG4774  384 TDYTDRTTGATTSSYdDSAFSPRAGLVYKPTPNLSLYASYSTSFNPGGGAPSLSNAGQALDPE-KSRQYEVGVKWdLLDG 462

                        490       500       510       520       530       540       550       560
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 896565488 544 ALTLGAAVFRISQPYQYAkPDSSDvGYTFVEEGTQTHTGLELTANGQLTDALQIVASASVLQARARDTGTPAYAGNQLVN 623
Cdd:COG4774  463 RLSLTAALFRIEKTNVRT-TDPAN-PGVYVQTGEQRSRGVELEATGELTPGWSVLAGYTYLDAEITKSANAANVGNRLPN 540

                        570       580       590       600       610       620       630       640
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 896565488 624 VPKVRASVHVAYALPfVQGLDVTGGWRYAGANVARADGGVRAPDYSVFDAGLRFQHRlheRAVTWNLSVDNVFNRFYWRd 703
Cdd:COG4774  541 VPRHSASLWTTYDLP-LPGLTLGGGVRYVGSRYADAANTVKLPSYTRFDAGASYRLN---KNLTLRLNVNNLTDKRYYA- 615

                        650       660
                 ....*....|....*....|....
gi 896565488 704 tgSSGGDYYLFPGAPRQARLSVTF 727
Cdd:COG4774  616 --SAYGSGYVTPGAPRTVLLSASY 637
FhuE COG4773
Outer membrane receptor for ferric coprogen and ferric-rhodotorulic acid [Inorganic ion ...
 39-727 3.11e-148

Outer membrane receptor for ferric coprogen and ferric-rhodotorulic acid [Inorganic ion transport and metabolism];


Pssm-ID: 443805 [Multi-domain]  Cd Length: 692  Bit Score: 448.57  E-value: 3.11e-148
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 896565488  39 SPTELAAVRVQAGKP-----KADTSRVNAFGGGSWKDTPASVNVLERNYLDRRQVRSLSELASNDASLGDAYAPVGYYQN 113
Cdd:COG4773   28 EATTLPEVTVTGTAEgtggyTAKSSSTATKLDTPLRETPQSVSVVTRQLIEDQGATTLDDALRNVPGVTVSSYDGGGRDS 107

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 896565488 114 IAIRGFALDaatGYRFNGLSI--AGEQRLALENVQSVEILKGEAGLAAGVMAPGGIINYIGKRPAE--VRTATLGTDSEG 189
Cdd:COG4773  108 FSIRGFSID---NYLRDGLPLggFGGGQPDTANLERVEVLKGPAGLLYGAGSPGGLVNLVTKRPTAepQGEVSLSAGSWD 184

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 896565488 190 SRYVAVDVGHWITP--RFGLRLNAAWDSSNSYVEHADGRRNFYSLAADWLIGERGKLEVDANYQTSSQRSVSGYqlLGAR 267
Cdd:COG4773  185 TYRATADVGGPLNEdgTLRYRLNAAYEDGDSFRDGVDNRRTLIAPSLDWDLTDDTTLTLGAEYQDDDSTGDRGF--LPLD 262

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 896565488 268 ELPHGVDREFLLGyQPWQRpVDIASTNITALHTYDFNDTWQSRVSVGHSRSVIDDNVAFAYGCYYAAqcadgsvpgnyfa 347
Cdd:COG4773  263 GTLLDLPRSTNLG-EPWDY-YDTETTTLFAELEHRFNDDWSLRANARYSDSDRDGRSAYAYGAPDAA------------- 327

                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 896565488 348 pNGDYDVYDYRSpDDTRRNQQARAELRGRFETGSVGHELTIGADYFRRTVDKRPSvneYVGTSNIHDAQVPVFAPSPkmP 427
Cdd:COG4773  328 -TGTLTRYASAR-DGDSRSDSLDANLNGKFETGGLEHTLLVGADYSRYDSDSDSA---TAGTINIYNPVYGNLPEPD--F 400

                        410       420       430       440       450       460       470       480
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 896565488 428 GPSARRLDSRQTAFFALDRMSFGDDWQWLAGGRFVRLDEHAYDKRGNPQRHSRLSRFLPQTAVVWKATDQLNAYASYVRG 507
Cdd:COG4773  401 DASDTDTTTRQTGLYAQDQISLTDRLSLLLGGRYDWYETDSTNRLGGSTTSYDDSAFTPRAGLVYDLTPGLSLYASYSES 480

                        490       500       510       520       530       540       550       560
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 896565488 508 ISLGQEapfwTSNADTFLPSVQSRQLEVGVKYVPVE-ALTLGAAVFRISQPYQYAkPDSSDVGYtFVEEGTQTHTGLELT 586
Cdd:COG4773  481 FEPQSG----ADNNGNPLDPETGKQYEAGVKGELFDgRLNATLAVFDITQKNVAT-TDPDNPNF-YVQVGEVRSRGVELE 554

                        570       580       590       600       610       620       630       640
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 896565488 587 ANGQLTDALQIVASASVLQARARDTgTPAYAGNQLVNVPKVRASVHVAYALPFV--QGLDVTGGWRYAGANVARADGGVR 664
Cdd:COG4773  555 LSGELTPGLNLIAGYTYTDAKITKD-ADALEGKRLTNVPRHTASLWTTYRFPSGalKGLGLGGGVRYVGERYGDAANTFT 633

                        650       660       670       680       690       700
                 ....*....|....*....|....*....|....*....|....*....|....*....|...
gi 896565488 665 APDYSVFDAGLRFQHRlheRAVTWNLSVDNVFNRFYWRdtgSSGGDYYLFPGAPRQARLSVTF 727
Cdd:COG4773  634 LPSYTLVDAGARYDLG---KNWTLQLNVNNLFDKKYYA---SSGSRGYVYYGAPRNVRLSLSY 690
TonB-siderophor TIGR01783
TonB-dependent siderophore receptor; This subfamily model encompasses a wide variety of ...
 70-727 8.10e-105

TonB-dependent siderophore receptor; This subfamily model encompasses a wide variety of TonB-dependent outer membrane siderophore receptors. It has no overlap with TonB receptors known to transport other substances, but is likely incomplete due to lack of characterizations. It is likely that genuine siderophore receptors will be identified which score below the noise cutoff to this model at which point the model should be updated. [Transport and binding proteins, Cations and iron carrying compounds, Transport and binding proteins, Porins]


Pssm-ID: 273805 [Multi-domain]  Cd Length: 651  Bit Score: 334.38  E-value: 8.10e-105
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 896565488   70 DTPASVNVLERNYLDRRQVRSLSELASNDASLGDAYAP-VGYYQNIAIRGFAL-DAATGYRFNGLSIAGEQRLA---LEN 144
Cdd:TIGR01783   1 DIPQSVSVITRQELEDQQAGSLSEALQRVPGVVVGGSGgTTQFGNITIRGFGLeVDIDNVYLDGVPLLSRGNLAivdPAM 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 896565488  145 VQSVEILKGEAGLAAGVMAPGGIINYIGKRP--AEVRTATLGTDSEGSRYVAVDVGHWITP--RFGLRLNAAWDSSNSYV 220
Cdd:TIGR01783  81 VERVEVLRGPASLLYGGSAPGGVINIVTKRPqdEPKGSVTFGAGTRSGYRTAFDLGGPLGAdgTFRGRLNGARQDGDSFY 160

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 896565488  221 EHADGRRNFYSLAADWLIGERGKLEVDANYQTSSQRSVSGYQLLGARELPHGVDREFLLGYQPWQRPVDIASTNITALHT 300
Cdd:TIGR01783 161 DGAGEETRLGATATDWQLDDRTLLRLGAYYQKERDRGGYGGLPASGGTSGRDLSSDRYLGTSSNRNYDDREYLSYGLSLE 240

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 896565488  301 YDFNDTWQSRVSVGHSRSVIDDNVAFAYGCYyaaqcadgsvpgnyfAPNGDYDVYDYRSPDDTRRNQqARAELRGRFETG 380
Cdd:TIGR01783 241 YQFNDVWTGKQNLRYSYFDTDSNQVQASGYS---------------SDGGLFGRSLTVVNVKQDRVQ-IDAGLDGEFETG 304

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 896565488  381 SVGHELTIGADYFRRTVDKRPSVNEYVGTSNIHDAQVPVFAPSPKMPgpSARRLDSRQTAF--FALDRMSFGDDWQWLAG 458
Cdd:TIGR01783 305 PIEHDLLLGVSYGQRTTNRFNNTGYPSDNIYSLTATSSARTDIGDSP--KDRALSSTTKALngVALQRILLADKWTLTLG 382

                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 896565488  459 GRFVRLDEHAYDKRGNPQRHSRLSRFLPQTAVVWKATDQLNAYASYVRGISLGQEAPFWTSNADTFLPSVQSRQLEVGVK 538
Cdd:TIGR01783 383 GRYDSVDVKSNNGVAGSTGKRDDSQFTPSLGVAYKPTDDWSLYASYAESFKPGGYYPKGAGNSGDILEPEKGKNYELGVR 462

                         490       500       510       520       530       540       550       560
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 896565488  539 YVPVEALTLGAAVFRISQPYQYAKpdSSDVGYTFVEEGTQTHTGLELTANGQLTDALQIVASASVLQARARDTGTPAYAG 618
Cdd:TIGR01783 463 YDLGDSLLATAALFRITKDNQLVQ--DPVNGTFSVNAGKTRNRGVELEARGYLTPGLSLSAGYTYTDAEFTEDTNGDTQG 540

                         570       580       590       600       610       620       630       640
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 896565488  619 NQLVNVPKVRASVHVAYALPFVQ-GLDVTGGWRYAGANVARADGGVRAPDYSVFDAGLRFQHRLHERaVTWNLSVDNVFN 697
Cdd:TIGR01783 541 NTVPFVPKHTASLWASYAPPVGDnGLTLGGGVQYTGKAYVDGGNTGKVPSYTVVDLSVRYDLTKKKN-LTLALNVNNLFD 619

                         650       660       670
                  ....*....|....*....|....*....|
gi 896565488  698 RFYWRDTGSSGGDYYLFPGAPRQARLSVTF 727
Cdd:TIGR01783 620 RDYYTSGYRWGPSAYIYPGAPRTVGLSVSY 649
ligand_gated_channel cd01347
TonB dependent/Ligand-Gated channels are created by a monomeric 22 strand (22,24) ...
 74-727 3.28e-75

TonB dependent/Ligand-Gated channels are created by a monomeric 22 strand (22,24) anti-parallel beta-barrel. Ligands apparently bind to the large extracellular loops. The N-terminal 150-200 residues form a plug from the periplasmic end of barrel. Energy (proton-motive force) and TonB-dependent conformational alteration of channel (parts of plug, and loops 7 and 8) allow passage of ligand. FepA residues 12-18 form the TonB box, which mediates the interaction with the TonB-containing inner membrane complex. TonB preferentially interacts with ligand-bound receptors. Transport thru the channel may resemble passage thru an air lock. In this model, ligand binding leads to closure of the extracellular end of pore, then a TonB-mediated signal facillitates opening of the interior side of pore, deforming the N-terminal plug and allowing passage of the ligand to the periplasm. Such a mechanism would prevent the free diffusion of small molecules thru the pore.


Pssm-ID: 238657 [Multi-domain]  Cd Length: 635  Bit Score: 255.07  E-value: 3.28e-75
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 896565488  74 SVNVLERNYLDRRQVRSLSELASNDASLGDAYAPVGYYQNIAIRGFALDAaTGYRFNGLSIAGE--------QRLALENV 145
Cdd:cd01347    1 SVSVITAEDIEKQPATSLADLLRRIPGVSVTRGGGGGGSTISIRGFGPDR-TLVLVDGLPLASSnygrgvdlNTIPPELI 79

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 896565488 146 QSVEILKGEAGLAAGVMAPGGIINYIGKRPAEV----RTATLGTDSEGSRY-VAVDVG--HWITPRFGLRLNAAWDSSNS 218
Cdd:cd01347   80 ERVEVLKGPSSALYGSGAIGGVVNIITKRPTDEfggsVTAGYGSDNSGSSGgGGFDVSgaLADDGAFGARLYGAYRDGDG 159

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 896565488 219 YVEHADG------RRNFYSLAADWLIGERGKLEVDANYQTSSQRSVSGYQLLGARELPHGVD-REFLLGYQPWQRPvDIA 291
Cdd:cd01347  160 TIDGDGQaddsdeERYNVAGKLDWRPDDDTRLTLDAGYQDQDADGPGGTLPANGTGSSLGGGpSSNTNGDRDWDYR-DRY 238

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 896565488 292 STNITALHTYDFND-TWQSRVSVGHSRSVIDDNVAFAYGcyyaaqcadgsvpgNYFAPNGDYDVYDYRSPDDTRRNQqAR 370
Cdd:cd01347  239 RKRASLGLEHDLNDtGWTLRANLSYSYTDNDGDPLILNG--------------GNNAAGGDLGRSGYSSERDTTQLG-FD 303

                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 896565488 371 AELRGRFETGSVGHELTIGADYFRRtvdkrpsvneyvgtsnihdaqvpvfapspkmpgpsarRLDSRQTAFFALDRMSFG 450
Cdd:cd01347  304 AGLNAPFGTGPVAHTLTLGVEYRRE-------------------------------------ELDEKQTALYAQDTIELT 346

                        410       420       430       440       450       460       470       480
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 896565488 451 DDWQWLAGGRFVRLDEHAYD-KRGNPQRHSRLSRFLPQTAVVWKATDQLNAYASYVRGISLGQEAPFWTSNADTFLPSV- 528
Cdd:cd01347  347 DDLTLTLGLRYDHYDQDSKDtIAGGTTAKKSYSHWSPSLGLVYKLTDGLSLYASYSQGFRAPSLGELYGGGSHGGTAAVg 426

                        490       500       510       520       530       540       550       560
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 896565488 529 -------QSRQLEVGVKYVPVEALTLGAAVFRISQP-YQYAKPDSSDVG--YTFVEEGTQTHTGLELTANGQLTDALQIV 598
Cdd:cd01347  427 npnlkpeKSKQYELGLKYDPGDGLTLSAALFRIDIKnEIVSTPTNTGLGlvTVYVNGGKARIRGVELEASYDLTDGLGLT 506

                        570       580       590       600       610       620       630       640
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 896565488 599 ASASVLQARARDTGTpAYAGNQLVNVPKVRASVHVAYALPFvQGLDVTGGWRYAGA---NVARADGGVRAPDYSVFDAGL 675
Cdd:cd01347  507 GSYTYTDTEVKRTDG-ATTGNRLPGIPKHTANLGLDYELPD-EGLTAGGGVRYRGKqyaDTANGNNTVKVPGYTLVDLSA 584

                        650       660       670       680       690
                 ....*....|....*....|....*....|....*....|....*....|..
gi 896565488 676 RFQHRLHeraVTWNLSVDNVFNRFYWRDTGSSGGDYYLFPGAPRQARLSVTF 727
Cdd:cd01347  585 SYQFTKN---LTLRLGVNNLFDKDYYTSLSVRGSGLYGYYGPGRTYYLSVSY 633
CirA COG1629
Outer membrane receptor protein, Fe transport [Inorganic ion transport and metabolism];
69-714 3.71e-65

Outer membrane receptor protein, Fe transport [Inorganic ion transport and metabolism];


Pssm-ID: 441236 [Multi-domain]  Cd Length: 644  Bit Score: 228.17  E-value: 3.71e-65
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 896565488  69 KDTPASVNVLERNYLDRRQVRSLSELASNDASLgDAYAPVGYYQNIAIRGFALDAA-TGYRFNGLSIAGEQRLA------ 141
Cdd:COG1629   16 QDVPGSVSVISREQLEDQPATDLGDLLRRVPGV-SVTSAGGGAGQISIRGFGGGGNrVLVLVDGVPLNDPSGGDgglsyi 94

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 896565488 142 -LENVQSVEILKGEAGLAAGVMAPGGIINYIGKRPAEVRT----ATLGTDSEGSRYVAVDVGhwiTPRFGLRLNAAWDSS 216
Cdd:COG1629   95 dPEDIERVEVLRGPSSALYGSGALGGVINIVTKKPKDGKGgevsASYGSYGTYRASLSLSGG---NGKLAYRLSASYRDS 171

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 896565488 217 NSYVEHADGRRNFYSLAADWLIGERGKLEVDANYQTSSQRSvSGYQLLGARELPHGVDRefllGYQPWQRPVDIASTNIT 296
Cdd:COG1629  172 DGYRDNSDSDRYNLRAKLGYQLGDDTRLTLSASYSDSDQDS-PGYLTLAALRPRGAMDD----GTNPYSNDTDDNTRDRY 246

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 896565488 297 ALH-TYD-FNDTWQSRVSVGHSRSVIDDNVAFaygcyyaaqcadgsvpGNYFAPNGDYDVYDYrspDDTRRNQQARAELR 374
Cdd:COG1629  247 SLSlEYEhLGDGLKLSASAYYRYDDTDLDSDF----------------TPTPADGGTLEQTDF---DNRTYGLELRLTYD 307

                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 896565488 375 GRFETgsvGHELTIGADYFRRTVDKRPSVNEYVGTSNIHDAQVPVFapspkmpgpsarRLDSRQTAFFALDRMSFGDDWQ 454
Cdd:COG1629  308 LGFGG---KHTLLVGLDYQRQDLDGSGYPLDLGSGSLPTLTSGADD------------DGTTTSLALYAQDTYKLTDKLT 372

                        410       420       430       440       450       460       470       480
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 896565488 455 WLAGGRF--VRLDEHAYDKRGNPQRHSR-LSRFLPQTAVVWKATDQLNAYASYVRGI------SLGQEAPFWTSNADTFL 525
Cdd:COG1629  373 LTAGLRYdyVSYDVDDTVTGTDSASGSRsYSAFSPSLGLTYQLSPNLSLYASYSRGFraptfgELYANGTDPYSVGNPDL 452

                        490       500       510       520       530       540       550       560
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 896565488 526 PSVQSRQLEVGVKYVPV-EALTLGAAVFRI-SQPYQYAKPDSSDVGYTFVEE--GTQTHTGLELTANGQLTDALQIVASA 601
Cdd:COG1629  453 KPETSTNYELGLRYRLLdGRLSLSLALFYSdVDNEILSVPLPNDSGFSTYYTnaGKARSYGVELELSYQLTPGLSLNASY 532

                        570       580       590       600       610       620       630       640
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 896565488 602 SVLQARARD--TGTPAYAGNQLVNVPKVRASVHVAYALPfvQGLDVTGGWRYAGA-NVARADGGVRAPDYSVFDAGLRFQ 678
Cdd:COG1629  533 SYTDAKFDDdtDGSADLDGNRLPGVPPLTANLGLTYEFP--GGWSLGLGVRYVGDrYLDDANTQGAPGGYTLVDLGAGYR 610

                        650       660       670
                 ....*....|....*....|....*....|....*.
gi 896565488 679 HRLHeraVTWNLSVDNVFNRFYWRDTGSSGGDYYLF 714
Cdd:COG1629  611 FGDN---LTLSLGVDNLFDKKYATSLSVRASNVRGF 643
FecA COG4772
Outer membrane receptor for Fe3+-dicitrate [Inorganic ion transport and metabolism];
38-729 3.98e-46

Outer membrane receptor for Fe3+-dicitrate [Inorganic ion transport and metabolism];


Pssm-ID: 443804 [Multi-domain]  Cd Length: 681  Bit Score: 175.12  E-value: 3.98e-46
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 896565488  38 RSPTELAAVRVQAGKPKADTSrvnafgggswKDTPASVNVLERNYLDRRQVRSLSEL--------ASNDASLGDAyapvg 109
Cdd:COG4772   18 EAATTLETVVVTGSRAAEARL----------KDVPGSVSVVDREELENQAATSLREVlrrvpgvnVQEEDGFGLR----- 82

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 896565488 110 yyQNIAIRGFALDAATGYRF--NGLSIA------GEQRLA--LENVQSVEILKGEAGLAAGVMAPGGIINYIGKRPAEVR 179
Cdd:COG4772   83 --PNIGIRGLGPRRSRGITLleDGIPIApapygdPAAYYFpdLERMERIEVLRGAAALRYGPQTVGGAINFVTRTIPTAF 160

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 896565488 180 TATLGTD--SEGSRYVAVDVGHWITpRFGLRLNAAWDSSNSYVEHADGRRNFYSLAADWLIGERGKLEVDANYqtSSQRS 257
Cdd:COG4772  161 GGELRVTggSFGYRRTHASVGGTVG-NFGYLVEYSRKRGDGFRDNSGFDINDFNAKLGYRLSDRQELTLKFQY--YDEDA 237

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 896565488 258 vsgyqllgarELPHGV-DREFLLGyqPWQRPVDiastnitalhtYDFNDTWQSRVSVGHSRSvIDDNVAFAYGCYYAAQC 336
Cdd:COG4772  238 ----------NTPGGLtDAQFDAD--PRQSYRP-----------ADQFDTRRTQLSLRYEHQ-LSDNTTLTTTAYYNDFS 293

                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 896565488 337 ADGSVPGNYFAPNGDYDVYDYRspDDTRRNQQARAELRGRFETGSVGHELTIGADYFRRTVDKRPSVNEYVGTSNihdaq 416
Cdd:COG4772  294 RNWYIRQNTADPNTPGLGLRGN--PRGYRSYGIEPRLTHRFELGGVPHTLEVGLRYHREEEDRKQYVNTYGQGRS----- 366

                        410       420       430       440       450       460       470       480
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 896565488 417 vpvfapspKMPGPSARRLDSRQTAFFALDRMSFGDDWQWLAGGRFVRLDEHAYDKR-----GNPQRHSRLSRFLPQTAVV 491
Cdd:COG4772  367 --------GAGLRRDRRFSADALAAYAQNRFELTGRLTLTPGLRYEHIRRDRTDRYstrtgGDDSGSNSYSEFLPGLGLL 438

                        490       500       510       520       530       540       550       560
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 896565488 492 WKATDQLNAYASYVRG---ISLGQEAPFWTSNADtfLPSVQSRQLEVGVKYVPVEALTLGAAVFRIS-----QPYQYAKP 563
Cdd:COG4772  439 YQLTDNLQLYANVSRGfepPTFGDLAYGNGGNPD--LKPEKSWNYELGTRGRIGNGLSAEVALFYIDydnelGSCSAAGG 516

                        570       580       590       600       610       620       630       640
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 896565488 564 DSSdvgyTFVEEGTQTHTGLELTANGQL----TDALQIVASASVLQARARDTGTPAYAGNQLVNVPKVRASVHVAYALpf 639
Cdd:COG4772  517 DRS----TFTNAGETRHQGLELALDYDLlkggGLGLPLFAAYTYTDAEFTSDFGPVFAGNRLPYVPRHQLTAGLGYEH-- 590

                        650       660       670       680       690       700       710       720
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 896565488 640 vQGLDVTGGWRYAG------ANVARADGGVRAPDYSVFDAGLRFQHRLHeraVTWNLSVDNVFNRFYW--RDTGSSGGdy 711
Cdd:COG4772  591 -GGWTANLNGRYVSeqftdaANTVADGSFGKIPSYTVLDLSASYDFGKN---LSLFAGVNNLFDKRYIasRAPNYAAG-- 664

                        730
                 ....*....|....*...
gi 896565488 712 yLFPGAPRQARLSVTFAL 729
Cdd:COG4772  665 -IRPGPPRTVYAGLRLKF 681
TonB_dep_Rec pfam00593
TonB dependent receptor; This model now only covers the conserved part of the barrel structure.
 237-727 3.45e-39

TonB dependent receptor; This model now only covers the conserved part of the barrel structure.


Pssm-ID: 395474 [Multi-domain]  Cd Length: 475  Bit Score: 151.46  E-value: 3.45e-39
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 896565488  237 LIGERGKLEVDANYQTSSQRSVSGYQLLGARELPHGVDREFLLGYQPWQRpVDIASTNITALHTYDFNDTWQSRVSVGHs 316
Cdd:pfam00593   8 LLGDDTLLTLGYDYSRYTDGLDLGLTLDGYGNDGGYLGDRPLYYGRDYSD-TDRKRLSLGYDYDLGDGLSWLSTLRLGL- 85

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 896565488  317 rsviddnvafaygcYYAAQCADGSVPGNYFAPNGDYDVYD-YRSPDDTRRNQQARAELRGRFETGsvGHELTIGADYFRR 395
Cdd:pfam00593  86 --------------RYSSLDGDYTSNSSGLSGAGDYLSDDrLYGLYGLDGDLELSLDLSHDLLLG--VELRTAGLDYRRL 149

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 896565488  396 TVDKRPSVNEYVGTSNihdaqvpvfapspkmpgpSARRLDSRQTAFFALDRMSFGDDWQWLAGGRFVRLDEHAYDKRGNP 475
Cdd:pfam00593 150 DDDAYDPYDPANPSSS------------------SYSDTTTDSYGLYLQDNIKLTDRLTLTLGLRYDHYSTDGDDGNGGG 211

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 896565488  476 QRHSR-LSRFLPQTAVVWKATDQLNAYASYVRGI----------SLGQEAPFWTSNADTFLPSVQSRQLEVGVKYVPvEA 544
Cdd:pfam00593 212 DNFSRsYSAFSPRLGLVYKPTDNLSLYASYSRGFrapslgelygSGSGGGGGAVAGGNPDLKPETSDNYELGLKYDD-GR 290

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 896565488  545 LTLGAAVFRISQP----YQYAKPDSSDVGYTFVEEGTQTHTGLELTANGQLTDALQIVASASVLqaRARDTGTPAYAGNQ 620
Cdd:pfam00593 291 LSLSLALFYIDIKnlitSDPDGPGLGGTVYTYTNVGKARIRGVELELSGRLWGLGLSGGGYTYT--DADDDADADDTGNP 368

                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 896565488  621 LVNVPKVRASVHVAYALPfVQGLDVTGGWRYAG---ANVARADGGVRAPDYSVFDAGLRFQHRLHeraVTWNLSVDNVFN 697
Cdd:pfam00593 369 LPNVPRHTANLGLTYDFP-LGGWGARLGARYVGsgeRRYGDAANTFKTPGYTLVDLSAGYRLNKN---LTLRLGVNNLFD 444

                         490       500       510
                  ....*....|....*....|....*....|
gi 896565488  698 RFYWRDTGSSGGDYYLFPGAPRQARLSVTF 727
Cdd:pfam00593 445 KYYKRYYSSGGGNLGGYPGPGRTFYLGLSY 474
PRK14050 PRK14050
TonB-dependent siderophore receptor;
39-700 4.10e-35

TonB-dependent siderophore receptor;


Pssm-ID: 237595 [Multi-domain]  Cd Length: 728  Bit Score: 142.63  E-value: 4.10e-35
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 896565488  39 SPTELAAVRVQAGKPKAD--TSRVNAF-----GGGSWKDT-----PASVNVLERNYLDRRQV-RSLSE-LASNDASLGDA 104
Cdd:PRK14050  35 NTTQLETIVVEGGNAASAtaTGPVDGYvakatATGSKTDTpiteiPQSVSVVGRQEMDDRGVtNKVDEaLRYTPGVLSQP 114

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 896565488 105 YAPVGYYQNIAIRGFalDAA-TGYRFNGLSIA----GEQRLALENVQSVEILKGEAGLAAGVMAPGGIINYIGKRPAE-- 177
Cdd:PRK14050 115 FGTDGDTDWFYIRGF--DATqTGVFLDGLNLFsygfGGFQIDPFMLERVEVLKGPASVLYGGSNPGGIVNMVSKRPLDep 192

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 896565488 178 VRTATLGTDSEGSRYVAVDVGHWITPR--FGLRLNAAWDSSNSYVEHADGRRNFYSLAADWLIGERGKLEVDANYQTSSQ 255
Cdd:PRK14050 193 LYYTEIGINSYGNAFTGFDVGDKLSDDgtVRYRVTGKVAGGDNYSDYSEDLRGFIMPQITYAPDDATSLTVYGYLSGLDQ 272

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 896565488 256 RSVSGYQL--LGARE-LPHG-VDREFLLGyqpwQRPVDIASTNITALHT---YDFNDTWQSRVSVGHSRSVIDDNVAFAY 328
Cdd:PRK14050 273 VHVGNGFLpyVGTVVdAPFGkIDRDAFYG----EPDIDNGSYAQQMLGYefsHEFDNGWTFSQNARYGHLHKHEKGPYTY 348

                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 896565488 329 GCYYAAQCADGSVPGNYFAPNGDydvYDYRSPDDTRrnqQARAELRGRFETGSVGHELTIGADYFRRTVDKRpsvnEYVG 408
Cdd:PRK14050 349 GYVGGATGLPDPTGPDYMLNRIG---FEHRSKVDSF---SIDNRLEGEFDTGALTHNLLFGLDYKYYRLDQV----QACC 418

                        410       420       430       440       450       460       470       480
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 896565488 409 TSNIHDAQVPVFApSPKmpGPSARRLDS----RQTAFFALDRMSFGDDWQWLAGGRFVRLDEHAyDKRGNPQRHSRLSRF 484
Cdd:PRK14050 419 GATPISATNPVYG-TTQ--GANFVYLDQiltqQQIGIYAQDQIRFGDGWLVTLNGRYDYVDTDS-DARIGTSYESNDGAL 494

                        490       500       510       520       530       540       550       560
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 896565488 485 LPQTAVVWKATDQLNAYASYvrgislgqeAPFW-----TSNADTFLPSVQSRQLEVGVKYVP--VEALtLGAAVFRISQp 557
Cdd:PRK14050 495 SGRAGLAYEFDNGLTPYVSA---------ATFFnplvgTLASGPPLKPEEGEQYEAGIKYEPsfIDGL-ITASVFQITK- 563

                        570       580       590       600       610       620       630       640
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 896565488 558 yqyaKPDSSDVGYTFVEE--GTQTHTGLELTANGQLTDALQIVASASVLQARARDTGTPAYAGNQLVNVPKVRASVHVAY 635
Cdd:PRK14050 564 ----KNVTVTDPLTFASTqlGEVRSRGFELEGKVNLDDNWKALASFTYTDLEITEDANPSLIGNSPYLVPETQASLWLDY 639

                        650       660       670       680       690       700
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 896565488 636 ALP--FVQGLDVTGGWRYAGANVARADGGVRAPDYSVFDAGLRFQhrlhERAVTWNLSVDNVFNRFY 700
Cdd:PRK14050 640 AVTdgAFEGVSLGAGVRYQGESWADEANTLKVPAATLFDAAIRYE----KNDWGASLNVANLFDKEY 702
FepA COG4771
Outer membrane receptor for ferrienterochelin and colicins [Inorganic ion transport and ...
 69-678 3.19e-34

Outer membrane receptor for ferrienterochelin and colicins [Inorganic ion transport and metabolism];


Pssm-ID: 443803 [Multi-domain]  Cd Length: 612  Bit Score: 138.84  E-value: 3.19e-34
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 896565488  69 KDTPASVNVLERNYLDRRQVRSLSELASNDASLG-DAYAPVGYYQNIAIRGFA-------LDAATGYRFNGLSIAGEQRL 140
Cdd:COG4771   42 SDAPASVSVITAEEIEKLGATDLADALRLLPGVSvTRSGGRGGSSGISIRGLGgdrvlvlIDGVPVNNPALGGGGDLSYI 121

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 896565488 141 ALENVQSVEILKGEAGLAAGVMAPGGIINYIGKRPAEVR----TATLGTDSEGSRYVAVDVGhWITPRFGLRLNAAWDSS 216
Cdd:COG4771  122 PPDDIERIEVIRGPASALYGSDAIGGVINIITKKPTDELegsvSLGYGSNGNGTYSGSLSLG-GPGDKLSFLLSGSYRDR 200

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 896565488 217 NSYVEHADG--------RRNFYSLAADWLIGERGKLEVDANYqtSSQRSVSGYQLLGARELPHGVDREFLLGYQpwqrpv 288
Cdd:COG4771  201 DGYLDYRNGgfvgnsgyERYNLNAKLGYRLSDNHRLSLSGGY--SRQDRDGGPPTLGDTEISSDNAGDRDTTTD------ 272

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 896565488 289 diaSTNITALHTYDFNDTWQSRVSVGHSRsviddnvafaygcyyaaqcaDGSVPGNYFAPNGDYDVYDYRspddtrrNQQ 368
Cdd:COG4771  273 ---RGNYSLRYNGDLGDNLDLSLYYSRTD--------------------RDSTNGSLGGSTGSFSDSDDT-------TYG 322

                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 896565488 369 ARAELRGRFetgSVGHELTIGADYFRRTVDKRPSVNEYVGTSNIHdaqvpvfapspkmpgpsarrldsrqtAFFALDRMS 448
Cdd:COG4771  323 LELDLTYPL---GGNHTLTLGAEYRYDDLDSSSFLGGADASRDTY--------------------------GLFAQDEWK 373

                        410       420       430       440       450       460       470       480
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 896565488 449 FGDDWQWLAGGRFvrlDEHAYDKRGNPqrhsrlSRFLPQTAVVWKATDQLNAYASYVRGI---SLGQEAPFWTSNADTF- 524
Cdd:COG4771  374 LTDKLTLTAGLRY---DYYSTFGASNY------TAFSPRLGLRYDLSDNLTLRASYGRGFrapSLAELYGSGTGTPGRYv 444

                        490       500       510       520       530       540       550       560
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 896565488 525 -----LPSVQSRQLEVGVKYVPVEA-LTLGAAVFRI-SQPYQYAKPDSSDVG--YTFVEEGTQTHTGLELTANGQLTDAL 595
Cdd:COG4771  445 lgnpdLKPETSDNYELGLEYRLGNGgLSLSLTGFYTdIKDLIVLVPVGPGPGdvLQYENVGKARTYGLELELKYRLGKGL 524

                        570       580       590       600       610       620       630       640
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 896565488 596 QIVASASVLQARARDTGTpayaGNQLVNVPKVRASVHVAYALPfvQGLDVTGGWRYAGANVARADGGVRA---PDYSVFD 672
Cdd:COG4771  525 TLTASYTYLDSKIDDGDT----GEPLPNVPPHKANLGLDYRLP--KWWLLLLLTRYYGGRYVTPPSGRLEgytPGYTLLD 598


                 ....*.
gi 896565488 673 AGLRFQ 678
Cdd:COG4771  599 LRASYK 604
PRK09840 PRK09840
catecholate siderophore receptor Fiu; Provisional
 70-727 1.63e-27

catecholate siderophore receptor Fiu; Provisional


Pssm-ID: 182105 [Multi-domain]  Cd Length: 761  Bit Score: 118.76  E-value: 1.63e-27
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 896565488  70 DTPASVNVLERNYLDRRQVRSLSELASNDASLGDAYApvGYYQN------IAIRGFalDAATGYRFNGLSIAGEQRLALE 143
Cdd:PRK09840  70 DTTQTITVISEQVIKDQGATNLTEALRNVPGVGTFFA--GENGNtttgdaIYMRGF--DTSNSIYVDGIRDIGSISRDTF 145

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 896565488 144 NVQSVEILKGEAGLAAGVMAPGGIINYIGKRPA--EVRTATLGTDSEGSRYVAVDVGHWITPRFGLRLNAAWDSSnsyve 221
Cdd:PRK09840 146 NTEQVEVIKGPSGTDYGRSAPTGSINMISKQPRndSGIDASASIGSAWFRRGTLDVNQVIGDTTAVRLNVMGEKT----- 220

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 896565488 222 HADGR----RNFYSLAADWLIGERGKLEVDANYQTSSQRSVS----------GYQLLGARE--LPHG--VDREFLLG--- 280
Cdd:PRK09840 221 HDAGRdkvkNERYGVAPSVAFGLGTANRLYLNYLHVTQNNTPdggiptiglpGYSAPSAGRaaLNHAgkVDTHNFYGtds 300

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 896565488 281 -YQpwqrpvDIASTNITALHTYDFNDTWQSRVSVGHSRSVIDdnvafaygcyYAAQCADGSVPgNYFAPNGDyDVYDY-- 357
Cdd:PRK09840 301 dYD------DSTTDTATMRFEHDINDNTTLRNTTRWSRVKQD----------YLLTAIMGGAS-NITTPTPS-DVNTWtw 362

                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 896565488 358 -RS---PDDTRRNQQARAELRGRFETGSVGHELTIGADYFRRTvdkrpSVNEYVGTSNIhdAQVPVFAPSPKMPGP---- 429
Cdd:PRK09840 363 sRTantKDVSNKILTNQTNLTSTFYTGSIGHDVSTGVEFTRET-----QTNYGVNPVTL--PAVNLYHPDSSIHPGgltr 435

                        410       420       430       440       450       460       470       480
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 896565488 430 ----SARRLDSrqTAFFALDRMSFGDDWQwLAGGrfVRLDEH--AYDK--------RGNPQRHSRLSRFLPQTA------ 489
Cdd:PRK09840 436 nganANGQTDT--FAIYAFDTLQLTRDWE-LNGG--IRLDNYhtEYDSatacggsgRGAITCPAGVAKGSPVTTvdtaks 510

                        490       500       510       520       530       540       550       560
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 896565488 490 ---VVWKA------TDQLNAYASYV--------RGISLGQEAPFWTSNADTFLPSvQSRQLEVGVKY-VPVEALTLGAAV 551
Cdd:PRK09840 511 gnlVNWKAgalyklTENGNVYINYAvsqqppggSNFALAQSGSGNSANRTDFKPQ-KANTSEIGTKWqVLDKRLLLTAAL 589

                        570       580       590       600       610       620       630       640
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 896565488 552 FRISQPYQYAKPDSSdvgyTFVEEGTQTHTGLELTANGQLTDALQIVASASVLQARARDTGTPAYAG-NQLVNVPKVRAS 630
Cdd:PRK09840 590 FRTDIENEVEQNDDG----TYSQYGKKRVEGYELSVAGNITPAWQVIAGYTQQKATVKNGKDVAQDGsSSLPYTPEHAFT 665

                        650       660       670       680       690       700       710       720
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 896565488 631 VHVAYALPFvqGLDVTGGWRYAGANVARADGGVRAPDYS----VFDAGLRFQhrlHERAVTWNLSVDNVFNRFYWRDTGS 706
Cdd:PRK09840 666 LWSQYQATD--DLSVGGGARYIGSMHRGSDGAVGTPAFTegywVADAKLGYR---VNRNLDLQLNVYNLFDTDYVASINK 740

                        730       740
                 ....*....|....*....|.
gi 896565488 707 SGgdYYLFPGAPRQARLSVTF 727
Cdd:PRK09840 741 SG--YRYHPGEPRTFLLTANM 759
PRK10003 PRK10003
ferric-rhodotorulic acid outer membrane transporter; Provisional
 69-728 2.72e-27

ferric-rhodotorulic acid outer membrane transporter; Provisional


Pssm-ID: 236640 [Multi-domain]  Cd Length: 729  Bit Score: 118.05  E-value: 2.72e-27
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 896565488  69 KDTPASVNVLERNYLDRRQVRSLSELASN----DASLGDAYAPVgYYQniaiRGFALDaatGYRFNGLSIAGEQRLALEN 144
Cdd:PRK10003  76 RDIPQSVSIVSQQRMEDQQLQTLGEVMENtlgiSKSQADSDRAL-YYS----RGFQID---NYMVDGIPTYFESRWNLGD 147

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 896565488 145 VQS-------VEILKGEAGLAAGVMAPGGIINYIGKRpAEVRTATLGTDSE-GS----RYVAvDVGHWITPRFGLR--LN 210
Cdd:PRK10003 148 ALSdtalferVEVVRGATGLMTGTGNPSAAINMVRKH-ATSREFKGDVSAEyGSwnkqRYVA-DLQSPLTEDGKVRarIV 225

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 896565488 211 AAWDSSNSYVEHADGRRNFYSLAADWLIGERGKLEVDANYQTSSQRSVS--GYQLLGARELPHGVDREFllGYQPWQRPV 288
Cdd:PRK10003 226 AGYQNNDSWLDRYNSEKTFFSGIVDADLGDLTTLSAGYEYQRIDVNSPTwgGLPRWNTDGSSNSYDRAR--STAPDWAYN 303

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 896565488 289 DIASTNITALHTYDFNDTWQSRVSVGHSRSVIDDNVAFAYGcyYAAQcADGSVPGNYFAPNGDYDVYDYRSPDDTRRNQQ 368
Cdd:PRK10003 304 DKEINKVFMTLKQRFADTWQATLNATHSEVEFDSKMMYVDA--YVDK-ATGMLVGPYSNYGPGFDYVGGTGWNSGKRKVD 380

                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 896565488 369 A-RAELRGRFETGSVGHELTIGADYFRRTvDKRPSVNEYVGTS---NIHDAQvPVFAPSPKMPGPSARRLDSRQTAFFAL 444
Cdd:PRK10003 381 AlDLFADGSYELFGRQHNLMFGGSYSKQN-NRYFSSWANIFPDeigSFYNFN-GNFPQTDWSPQSLAQDDTTHMKSLYAA 458

                        410       420       430       440       450       460       470       480
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 896565488 445 DRMSFGDDWQWLAGGRFV--RLDEHAYDKRGNpqrhsrlsRFLPQTAVVWKATDQLNAYASYVrgiSLGQEAPFWTSNAD 522
Cdd:PRK10003 459 TRVSLADPLHLILGARYTnwRVDTLTYSMEKN--------HTTPYAGLVYDINDNWSTYASYT---SIFQPQNDRDSSGK 527

                        490       500       510       520       530       540       550       560
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 896565488 523 tFLPSVQSRQLEVGVKYVPVEA-LTLGAAVFRISQ------PYQYAKPDSSDVGYTFVeEGTQThTGLELTANGQLTDAL 595
Cdd:PRK10003 528 -YLAPITGNNYELGLKSDWMNSrLTTTLAIFRIEQdnvaqsTGTPIPGSNGETAYKAV-DGTVS-KGVEFELNGAITDNW 604

                        570       580       590       600       610       620       630       640
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 896565488 596 QIVASASVLQARARDtgtpayaGNQL-VNVPKVRASVHVAYALPFVQGLDVTGGWRYAG---ANVARADGGVRAPD--YS 669
Cdd:PRK10003 605 QLTFGATRYIAEDNE-------GNAVnPNLPRTTVKLFTRYRLPVMPELTVGGGVNWQNrvyTDTVTPYGTFRAEQgsYA 677

                        650       660       670       680       690       700
                 ....*....|....*....|....*....|....*....|....*....|....*....|...
gi 896565488 670 VFDAGLRFQhrlheraVTWNLSV----DNVFNRFYwrDTGSSGGDYYlfpGAPRQARLSVTFA 728
Cdd:PRK10003 678 LVDLFTRYQ-------VTKNFSVqgnvNNLFDKTY--DTNVEGSIVY---GAPRNFSITATYQ 728
PRK10044 PRK10044
ferrichrome outer membrane transporter; Provisional
 71-727 1.08e-25

ferrichrome outer membrane transporter; Provisional


Pssm-ID: 236643 [Multi-domain]  Cd Length: 727  Bit Score: 112.93  E-value: 1.08e-25
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 896565488  71 TPASVNVLERNYLDRRQVRSLSELASndaslgdaYAP---VG------YYQNIAIRGFALDA-ATGYRFNGLSIAG---- 136
Cdd:PRK10044  79 TPQSISVVTAEEMALHQPKSVKEALS--------YTPgvsVGtrgasnTYDHLIIRGFAASGqSQNNYLDGLKLQGnfyn 150

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 896565488 137 EQRLALENVQSVEILKGEAGLAAGVMAPGGIINYIGKRPAevrTATL-------GTDSEGSryVAVDVGHWI--TPRFGL 207
Cdd:PRK10044 151 DAVIDPYMLERAELMRGPVSVLYGKSNPGGLLNMVSKRPT---TEPLkevqfkmGTDNLFQ--TGFDFSDALddDGVYSY 225

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 896565488 208 RLNAAWDSSNSYVEHADGRRnfYSLAAD--WLIGERGKLEVDANYQTSSQRSVSGY--------QLLGARELPHGVD--- 274
Cdd:PRK10044 226 RLTGLARSANAQQKGSEEQR--YAIAPSftWRPDDKTNFTFLSYFQNEPETGYYGWlpkegtvePLPNGKRLPTDFNega 303

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 896565488 275 -------REFLLGYQpwqrpvdiastnitalHTYDFNDTWQSRVSVGHSRSVIDDNVAFAYGcyyaaqcadgsvpgnYFA 347
Cdd:PRK10044 304 knntysrNEKMVGYS----------------FDHEFNDTFTVRQNLRYAENKTSQRSVYGYG---------------VCS 352

                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 896565488 348 PNGDYDVYDYRSPDDTRRNQQARAELRGRFETGSVGHELTIGADYFRrtvdKRPSVNEYVGT------SNIHDAQVPVFA 421
Cdd:PRK10044 353 DKGHYLNRGYVVDDEKLQNFSVDTQLQSKFATGDVDHTLLTGVDFMR----MRNDINAWFGYadsvplLNLYGPVNTDFD 428

                        410       420       430       440       450       460       470       480
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 896565488 422 PSPKmPGPSARRLDSRQTAFFALDRMSFgDDWQWLAGGRFVRLDEHAYDKRGNPQRHSRLSRFLPQTAVVWKATDQLNAY 501
Cdd:PRK10044 429 FNAN-SGPYQILNKQKQTGLYVQDQAEW-DKWLVTLGGRYDWADQSSLNRVNGTTDKRDDKQFTWRGGVNYLFDNGITPY 506

                        490       500       510       520       530       540       550       560
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 896565488 502 ASYVRGIslgQEAPFWTSNADTFLPSvQSRQLEVGVKYVPVE-ALTLGAAVfrisqpYQYAK-----PDSSDVGYTfVEE 575
Cdd:PRK10044 507 FSYSESF---EPSSGTGKDGNIFAPS-KGKQYEAGVKYVPKDrPIVVTGAV------YQLTKtnnltADPENSFFS-VQG 575

                        570       580       590       600       610       620       630       640
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 896565488 576 GTQTHTGLELTANGQLTDALQIVASASVLQAR-ARDTgtpAYAGNQLVNVPKVRASVHVAYAL--PFVQGLDVTGGWRYA 652
Cdd:PRK10044 576 GEIRARGVELEAKAALSANVNVTGSYTYTDAEyTTDT---TYKGNTPAQVPKHMASLWADYTFfdGPLSGLTLGTGGRYT 652

                        650       660       670       680       690       700       710
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 896565488 653 GANVARADGGVRAPDYSVFDAGLRFQ-HRLHERAVTWNLSVDNVFNRFYwrdTGSSGGDYYLFPGAPRQARLSVTF 727
Cdd:PRK10044 653 GSSYGDPANSFKVGSYTVVDALVKYDlARFGMAGSSVALNVNNLFDREY---VASCFNTYGCFWGAERQVVATATF 725
TonB-hemin TIGR01785
TonB-dependent heme/hemoglobin receptor family protein; This model represents the ...
 55-727 9.69e-24

TonB-dependent heme/hemoglobin receptor family protein; This model represents the TonB-dependent outer membrane heme/hemoglobin receptor/transporter found in bacteria which live in contact with animals (which contain hemoglobin or other heme-bearing globins) or legumes (which contain leghemoglobin). Some species having hits to this model such as Nostoc, Caulobacter and Chlorobium do not have an obvious source of hemoglobin-like proteins in their biological niche and so the possibility exists that they act on some other substance. [Transport and binding proteins, Cations and iron carrying compounds, Transport and binding proteins, Porins]


Pssm-ID: 273807 [Multi-domain]  Cd Length: 665  Bit Score: 106.71  E-value: 9.69e-24
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 896565488   55 ADTSRVNAFGGGSW-KDTPASVNVLERNYLDRRQVRSLSELASNDASLGDAYAPVGYYQNIAIRGFALDAAT----GYRF 129
Cdd:TIGR01785   1 LDTVTVTATRTRQVlSEAPASVSVISGEQIESKQANNLADALNTVPGVDVTGGGRPPGQSINIRGLQDNRVLvvvdGARQ 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 896565488  130 NGLSIAGEQRLA---LENVQSVEILKGEAGLAAGVMAPGGIINYIGKRPA-----------EVRTATLGTDSEGSRYVAV 195
Cdd:TIGR01785  81 NYQRGGAHNGSLfvdPELLKRIEIVKGPSSSLYGSGALGGVVAFRTKDAAdllrpgqlfggLAKLSYGSNNNSFGGSVAV 160

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 896565488  196 dvghwitprfGLRLNAAWDSSNSYvehadgrrnFYSLAADWLIGERGKLEVDANYQTSSQRSVsGYQLLGARELphgvdr 275
Cdd:TIGR01785 161 ----------AGRLDDNLDALVAA---------TYRDGGNYRNGNKEEATNSAYVQKNLLAKL-GWQLDDAQRL------ 214

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 896565488  276 EFLLGYQPWQRpvDIASTNITAlhtydfNDTWQSRVSVGHSRSVIDDNVAFAYgcYYA----------AQCADGSVPgNY 345
Cdd:TIGR01785 215 EFSYFTTEGSL--DEAQNSGPG------TEYVLGSSSTLLASSTRDRSATLTY--NWTpednpwldatASLYYNRTE-ND 283

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 896565488  346 FAPNGDYDVYDYRSPDDTRrnqQARAELRGRFETGSVGHeLTIGADYFRrtvDKRPSvneYVGTSNIHDAQVPvfapspk 425
Cdd:TIGR01785 284 NDRSARGVGREEGYQYTTY---GATLQNTSRFDVASWST-LTYGVDWMK---DKRRT---ESFDPNSVTTIVP------- 346

                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 896565488  426 mPGPSARRldsRQTAFFALDRMSFGDD-WQWLAGGRF--VRLDEHAYDKRGNPQRHSrlSRFLPQTAVVWKATDQLNAYA 502
Cdd:TIGR01785 347 -NPPSAKE---YFFGLFLQDNIPLLDDrLTLSAGLRYdhYKLSPKTTADTEAVDRSY--SRWSPSLGLSYKPVDWLTLYA 420

                         490       500       510       520       530       540       550       560
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 896565488  503 SYVRGIS-------LGQEAPFWTSNADTFLPSV-----QSRQLEVGVKYVPVEA------LTLGAAVFR--------ISQ 556
Cdd:TIGR01785 421 SYSQGFRapsidelYGTGDHPGTPGGYTFAPNPnlkpeTSKTWELGANLSFDNLlldndqLQFKVAYFYndvkdfidLTI 500

                         570       580       590       600       610       620       630       640
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 896565488  557 PYQYAKPDSSDVGYTFVEEGTQTHTGLELTANGQLTDalqIVASASVLQARARDTGTPAYagnqLVNVPKVRASVHVAYA 636
Cdd:TIGR01785 501 GVTDNVTAGMNNITQYVNIDGARIRGIEASASYDAGL---WATGLSYGYTIGKDQNTNQW----LSNIPPLKLVVTVGYR 573

                         650       660       670       680       690       700       710       720
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 896565488  637 LPfVQGLDVTGGWRYAGANVAR-------ADGGVRAPDYSVFDAGLRFQHrLHERAVTWNLSVDNVFNRFYWRdtgsSGG 709
Cdd:TIGR01785 574 FP-DRRLDLGAKAAYYERQSESpttedvaANGLLTTPGYTVVDLYATYQP-NAVKGLTVRFGVNNLTDRKYTP----AQS 647

                         730
                  ....*....|....*...
gi 896565488  710 DYYLFPGapRQARLSVTF 727
Cdd:TIGR01785 648 VPGAGPG--RNFKGSVKY 663
PRK14049 PRK14049
ferrioxamine B receptor precursor protein; Provisional
 70-677 1.50e-21

ferrioxamine B receptor precursor protein; Provisional


Pssm-ID: 172541 [Multi-domain]  Cd Length: 726  Bit Score: 99.98  E-value: 1.50e-21
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 896565488  70 DTPASVNVLERNYLDRRQVRSLSE-LASNDASLGDAYAPVGYYQNIAIRGFALdAATGYRFNGLSIAGEQRLALEN---- 144
Cdd:PRK14049  78 ETPQSISSVTEQQLKDRNPQTLLEtLAYTPGARVGAFGFDPRFDAFFVRGFDV-TYTGVFRDNLRQPGASSSIFKTepyg 156

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 896565488 145 VQSVEILKGEAGLAAGVMAPGGIINYIGKRPAEVRTATL----GTDSegsRY-VAVDVGHWI--TPRFGLRLNAAW-DSS 216
Cdd:PRK14049 157 LEGVSILRGPSSALYGASGAGGLFNLITKRPTEEPLREVqvqyGTNN---RYqGQFDFSGPVneTDPVYYRLTGLLrDAD 233

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 896565488 217 NSYVEHADGRRnFYSLAADWLIGERGKLEVDANYQTSSQRSVSGYqllgarelphgvdrefllgyqpWQRPVDIASTNIT 296
Cdd:PRK14049 234 TEQVGVPDDRA-YIAPAFTWKPDEDTRLTVLGEYSRTKTGGTAAY----------------------YNDPLTGEVTDIF 290

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 896565488 297 ALHTyDFNDTWQSRVSVGHS-RSVIDDNVAFAYGCYYAAQCADGSVPGNYFAPNGDYDVYDYRSP--DDTRRNQQARAEL 373
Cdd:PRK14049 291 AGNP-AFNDSVQKQGRIGYEfEHRLNDTFVFRQNARVSTLNIDADWAFAYAPNAADPTLLDSSAGtyDERLTAFVIDNQL 369

                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 896565488 374 RGRFETGSVGHELTIGADYfrrTVDKRPSVNEYvGTSNIHDAQVPVFA-PSPKMPGPSARRLDSRQTAFFALDRMSFgDD 452
Cdd:PRK14049 370 EAKFDTGAFEHTLLAGVDY---TKLRFRALNGR-GVSPPLDTKNPTQGrPVAAIDFSTRTVQDQWQLGTYLQDQIRY-DA 444

                        410       420       430       440       450       460       470       480
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 896565488 453 WQWLAGGRFVRLDEHAYDKRGNPQRHSRLSR----FLPQTAVVWKATDQLNAYASYvrGISLGQEAPFWTSNADTFLPSv 528
Cdd:PRK14049 445 WTLTAGGRYDWVSTDTDTTDLATDSLTTVSQkdkeFSGRIGLTYETDFGLAPYISY--STAFSPNAGFNRATNQPFKPT- 521

                        490       500       510       520       530       540       550       560
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 896565488 529 QSRQLEVGVKY-VPVEALTLGAAVFRISQP----YQYAKPDSSDVGYTfVEEGTQTHTGLELTANGQLTDALQIVASASV 603
Cdd:PRK14049 522 ESEQQEVGVKYlLPNSNTLITAALFNIDQTnglyYEVVFLAAGPTNIQ-VQRGKLRSRGFELEANTSLDNGLSLIASYTY 600

                        570       580       590       600       610       620       630
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 896565488 604 LQARARDtGTPAYAGNQLVNVPKVRASVHVAYALP---FVQGLDVTGGWRYAGANVARADGGVRAPDYSVFDAGLRF 677
Cdd:PRK14049 601 TDVKIIQ-GPEGTIGNEVSSVPNHMASAWAHYTLPeggPLYGLGLGAGARFVGSSYGNDQNTFKNSSRVLFDASVGY 676
BtuB COG4206
Outer membrane cobalamin receptor protein BtuB [Coenzyme transport and metabolism];
69-256 3.25e-13

Outer membrane cobalamin receptor protein BtuB [Coenzyme transport and metabolism];


Pssm-ID: 443355 [Multi-domain]  Cd Length: 276  Bit Score: 70.67  E-value: 3.25e-13
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 896565488  69 KDTPASVNVLERNYLDRRQVRSLSELASNDASL-GDAYAPVGYYQNIAIRGFALDAaTGYRFNGLSIAGEQ-------RL 140
Cdd:COG4206   13 SDLTGSVTVIDAEELERSGATSLADALRRVPGVqVSSSGGPGSAASISIRGLGSNQ-TLVLIDGVPLNDPSlggvdlsLI 91

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 896565488 141 ALENVQSVEILKGEAGLAAGVMAPGGIINYIGKRPAEVR--TATLGTDSEGSRYVAVDVGHwITPRFGLRLNAAWDSSNS 218
Cdd:COG4206   92 PPDDIERIEVLKGAASALYGSDAIGGVINITTKKGKKGFkgSVSASYGSFGTRRLSASLSG-GAGKFSYSLSASYRRSDG 170

                        170       180       190       200
                 ....*....|....*....|....*....|....*....|....*
gi 896565488 219 Y-------VEHADGRRNFYSLAADWLIGERGKLEVDANYQTSSQR 256
Cdd:COG4206  171 YryndpdlRNNDGYENTSLNARLGYKLGDNGSLSLSGGYSDSERG 215
Plug pfam07715
TonB-dependent Receptor Plug Domain; The Plug domain has been shown to be an independently ...
 69-167 3.37e-13

TonB-dependent Receptor Plug Domain; The Plug domain has been shown to be an independently folding subunit of the TonB-dependent receptors. It acts as the channel gate, blocking the pore until the channel is bound by ligand. At this point it under goes conformational changes opens the channel.


Pssm-ID: 462243 [Multi-domain]  Cd Length: 107  Bit Score: 66.14  E-value: 3.37e-13
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 896565488   69 KDTPASVNVLERNYLDRRQVRSLSELASNDASLGDAYAPVGYYQNIAIRGFAlDAATGYRFNGLSIAGE-------QRLA 141
Cdd:pfam07715   3 RDTPGSVSVVTAEDIEDQGATNLADALRGVPGVSVSSGGGGGGSSISIRGFG-SNRVLVLVDGVPLNSGgggsvdlNSID 81

                          90       100
                  ....*....|....*....|....*.
gi 896565488  142 LENVQSVEILKGEAGLAAGVMAPGGI 167
Cdd:pfam07715  82 PEDIERVEVLKGPASALYGSGAIGGV 107
OMP_b-brl_3 pfam14905
Outer membrane protein beta-barrel family; This family includes proteins annotated as TonB ...
 554-727 2.41e-03

Outer membrane protein beta-barrel family; This family includes proteins annotated as TonB dependent receptors. But it is also likely to contain other membrane beta barrel proteins of other functions.


Pssm-ID: 434300 [Multi-domain]  Cd Length: 407  Bit Score: 41.10  E-value: 2.41e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 896565488  554 ISQPYQYakPDSSDVGY-TFVEEGTQTHTGLELTANGQLTDALQIVASASVLQARAR---------DTGTPAYAGNQLVN 623
Cdd:pfam14905 243 IQQTFIT--DDNDNVTYtTYENLGKSNSYGLELSASFNPTKWWSLNGNLNGYYNKYKidgslnsdfSNFGFNWNLNNTFT 320

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 896565488  624 VPK-VRASVHVAYALPFVQGLdvtggwryaganvaradgGVRAPDYSVfDAGLR--FqhrLHERAvTWNLSVDNVFNRFY 700
Cdd:pfam14905 321 LPKgWSLQLNGNYRSPRVTGQ------------------GKIKPFYSL-DLGLSksF---LKKKL-TLSLNVNDIFNTRK 377

                         170       180       190
                  ....*....|....*....|....*....|
gi 896565488  701 WRDTGSSGGDY---YLFPGAPRQARLSVTF 727
Cdd:pfam14905 378 FRSTTNYDNGFiqsYNNKWDSRSVRLSLSY 407
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
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