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Conserved domains on  [gi|910936648|ref|WP_050143431|]
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molecular chaperone [Yersinia mollaretii]

Protein Classification

molecular chaperone( domain architecture ID 11459711)

molecular chaperone belonging to the periplasmic pilus chaperone family may be involved in fimbrial biogenesis; similar to Escherichia coli fimbrial chaperones, YraI, YqiH, YbgP and ElfD

CATH:  2.60.40.10
Gene Ontology:  GO:0061077|GO:0030288|GO:0043711
PubMed:  1683764|8670884
SCOP:  4002248|4007561

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
FimC COG3121
P pilus assembly protein, chaperone PapD [Extracellular structures];
9-243 4.53e-78

P pilus assembly protein, chaperone PapD [Extracellular structures];


:

Pssm-ID: 442355 [Multi-domain]  Cd Length: 237  Bit Score: 235.27  E-value: 4.53e-78
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 910936648   9 YRYLFATLVMFMGISFANASVVMGGSRIIYSAGEKEHTVQLTNNDNFPNAVQVWLDSGDAKSTPDTGKAPFLVTPPFFRM 88
Cdd:COG3121    5 LRLLLLALLLLLASAAAAAGISISPTRVIYPAGDKEASLTLTNTGDTPYLVQSWVDDWDQDAGPDKATAPFVVTPPLFRL 84

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 910936648  89 EANAGQTLRLKYTGSGLPTNKESIFYLNFLQVPPVNKAEKN-NKMLVLLRNRIKVFYRPEGITGRVDQVSSALTFSVrqQ 167
Cdd:COG3121   85 EPGKSQTVRIIRTGPPLPQDRESLFRLNVDEIPPKDASEEGkNTLQIALRTRIKLFYRPAGLKGSPEDAAEKLTWSL--V 162

                        170       180       190       200       210       220       230
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 910936648 168 GSNVVVTgkNPTGFFATIASGEVIGSGKNLKMKSEMIPPMSQVEWVIPNSSAPSNPV-INFRLVNDFGGQDSGSYRI 243
Cdd:COG3121  163 GNGLTVT--NPGPYYVTLSDLSLGAGGKKLKKGLGMVLPGSTRRWPLPAGASLAAGGkVTWATINDYGGAVPLEATL 237
 
Name Accession Description Interval E-value
FimC COG3121
P pilus assembly protein, chaperone PapD [Extracellular structures];
9-243 4.53e-78

P pilus assembly protein, chaperone PapD [Extracellular structures];


Pssm-ID: 442355 [Multi-domain]  Cd Length: 237  Bit Score: 235.27  E-value: 4.53e-78
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 910936648   9 YRYLFATLVMFMGISFANASVVMGGSRIIYSAGEKEHTVQLTNNDNFPNAVQVWLDSGDAKSTPDTGKAPFLVTPPFFRM 88
Cdd:COG3121    5 LRLLLLALLLLLASAAAAAGISISPTRVIYPAGDKEASLTLTNTGDTPYLVQSWVDDWDQDAGPDKATAPFVVTPPLFRL 84

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 910936648  89 EANAGQTLRLKYTGSGLPTNKESIFYLNFLQVPPVNKAEKN-NKMLVLLRNRIKVFYRPEGITGRVDQVSSALTFSVrqQ 167
Cdd:COG3121   85 EPGKSQTVRIIRTGPPLPQDRESLFRLNVDEIPPKDASEEGkNTLQIALRTRIKLFYRPAGLKGSPEDAAEKLTWSL--V 162

                        170       180       190       200       210       220       230
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 910936648 168 GSNVVVTgkNPTGFFATIASGEVIGSGKNLKMKSEMIPPMSQVEWVIPNSSAPSNPV-INFRLVNDFGGQDSGSYRI 243
Cdd:COG3121  163 GNGLTVT--NPGPYYVTLSDLSLGAGGKKLKKGLGMVLPGSTRRWPLPAGASLAAGGkVTWATINDYGGAVPLEATL 237
PRK09926 PRK09926
fimbrial chaperone;
1-240 5.02e-60

fimbrial chaperone;


Pssm-ID: 236634 [Multi-domain]  Cd Length: 246  Bit Score: 189.55  E-value: 5.02e-60
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 910936648   1 MFNTHSYSYRYLFATLVMFMGISFANasVVMGGSRIIYSAGEKEHTVQLTNNDNFPNAVQVWLDSGDAKSTPDTGKAPFL 80
Cdd:PRK09926   1 MFFNTKHTTALCFATCMAFSSSSIAD--IVISGTRIIYKSDQKDVNVRLENKGNNPLLVQSWLDTGDDNAEPGSIKVPFT 78

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 910936648  81 VTPPFFRMEANAGQTLRLKYTGSG-LPTNKESIFYLNFLQVPPVNKAEK--NNKMLVL-LRNRIKVFYRPEGITGRVDQV 156
Cdd:PRK09926  79 ATPPVSRIDPKRGQTIKLMYTASTaLPKDRESVFWFNVLEVPPKPDAEKvaNQSLLQLaFRTRIKLFYRPDGLKGNPSEA 158

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 910936648 157 SSALTFSVRQQGSNVVVTGKNPTGFFATIASGEVIGSGKNLKMKSEMIPPMSQVEWVIPN-SSAPSNPVINFRLVNDFGG 235
Cdd:PRK09926 159 PLALKWSWAGSEGKASLRVTNPTPYYVSFSSGDLEAGGKRYPVDSKMIAPFSDESMKVKGlSGKASSGKVHFYAINDFGG 238


                 ....*
gi 910936648 236 QDSGS 240
Cdd:PRK09926 239 AIEGN 243
PapD_N pfam00345
Pili and flagellar-assembly chaperone, PapD N-terminal domain; C2 domain-like beta-sandwich ...
 29-149 8.56e-54

Pili and flagellar-assembly chaperone, PapD N-terminal domain; C2 domain-like beta-sandwich fold. This domain is the n-terminal part of the PapD chaperone protein for pilus and flagellar assembly.


Pssm-ID: 425623  Cd Length: 123  Bit Score: 169.31  E-value: 8.56e-54
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 910936648   29 VVMGGSRIIYSAGEKEHTVQLTNNDNFPNAVQVWLDSGDAKSTPDTGKAPFLVTPPFFRMEANAGQTLRLKYTGSGLPTN 108
Cdd:pfam00345   1 VVLGGTRVIYPAGEKEASVTVSNTGDNPYLVQSWVDDGNEEGTDEKAKAPFIVTPPLFRLEPGQEQVLRIYTTGPPLPTD 80

                          90       100       110       120
                  ....*....|....*....|....*....|....*....|..
gi 910936648  109 KESIFYLNFLQVPPVNKA-EKNNKMLVLLRNRIKVFYRPEGI 149
Cdd:pfam00345  81 RESLFWLNVLEIPPKDKPkGGQNGLQLALRSRIKLFYRPAGL 122
 
Name Accession Description Interval E-value
FimC COG3121
P pilus assembly protein, chaperone PapD [Extracellular structures];
9-243 4.53e-78

P pilus assembly protein, chaperone PapD [Extracellular structures];


Pssm-ID: 442355 [Multi-domain]  Cd Length: 237  Bit Score: 235.27  E-value: 4.53e-78
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 910936648   9 YRYLFATLVMFMGISFANASVVMGGSRIIYSAGEKEHTVQLTNNDNFPNAVQVWLDSGDAKSTPDTGKAPFLVTPPFFRM 88
Cdd:COG3121    5 LRLLLLALLLLLASAAAAAGISISPTRVIYPAGDKEASLTLTNTGDTPYLVQSWVDDWDQDAGPDKATAPFVVTPPLFRL 84

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 910936648  89 EANAGQTLRLKYTGSGLPTNKESIFYLNFLQVPPVNKAEKN-NKMLVLLRNRIKVFYRPEGITGRVDQVSSALTFSVrqQ 167
Cdd:COG3121   85 EPGKSQTVRIIRTGPPLPQDRESLFRLNVDEIPPKDASEEGkNTLQIALRTRIKLFYRPAGLKGSPEDAAEKLTWSL--V 162

                        170       180       190       200       210       220       230
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 910936648 168 GSNVVVTgkNPTGFFATIASGEVIGSGKNLKMKSEMIPPMSQVEWVIPNSSAPSNPV-INFRLVNDFGGQDSGSYRI 243
Cdd:COG3121  163 GNGLTVT--NPGPYYVTLSDLSLGAGGKKLKKGLGMVLPGSTRRWPLPAGASLAAGGkVTWATINDYGGAVPLEATL 237
PRK09926 PRK09926
fimbrial chaperone;
1-240 5.02e-60

fimbrial chaperone;


Pssm-ID: 236634 [Multi-domain]  Cd Length: 246  Bit Score: 189.55  E-value: 5.02e-60
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 910936648   1 MFNTHSYSYRYLFATLVMFMGISFANasVVMGGSRIIYSAGEKEHTVQLTNNDNFPNAVQVWLDSGDAKSTPDTGKAPFL 80
Cdd:PRK09926   1 MFFNTKHTTALCFATCMAFSSSSIAD--IVISGTRIIYKSDQKDVNVRLENKGNNPLLVQSWLDTGDDNAEPGSIKVPFT 78

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 910936648  81 VTPPFFRMEANAGQTLRLKYTGSG-LPTNKESIFYLNFLQVPPVNKAEK--NNKMLVL-LRNRIKVFYRPEGITGRVDQV 156
Cdd:PRK09926  79 ATPPVSRIDPKRGQTIKLMYTASTaLPKDRESVFWFNVLEVPPKPDAEKvaNQSLLQLaFRTRIKLFYRPDGLKGNPSEA 158

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 910936648 157 SSALTFSVRQQGSNVVVTGKNPTGFFATIASGEVIGSGKNLKMKSEMIPPMSQVEWVIPN-SSAPSNPVINFRLVNDFGG 235
Cdd:PRK09926 159 PLALKWSWAGSEGKASLRVTNPTPYYVSFSSGDLEAGGKRYPVDSKMIAPFSDESMKVKGlSGKASSGKVHFYAINDFGG 238


                 ....*
gi 910936648 236 QDSGS 240
Cdd:PRK09926 239 AIEGN 243
PRK15249 PRK15249
fimbrial chaperone;
10-243 6.20e-60

fimbrial chaperone;


Pssm-ID: 237930 [Multi-domain]  Cd Length: 253  Bit Score: 189.63  E-value: 6.20e-60
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 910936648  10 RYLFATLVMFMGISFANASVVMGGSRIIYSAGEKEHTVQLTNNDNFPNAVQVWLDSGDAKSTP-DTGKAPFLVTPPFFRM 88
Cdd:PRK15249  11 YYLIVFLFLALPATASWASVTILGSRIIYPSTASSVDVQLKNNDAIPYIVQTWFDDGDMNTSPeNSSAMPFIATPPVFRI 90

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 910936648  89 EANAGQTLRLKYTGS-GLPTNKESIFYLNFLQVPPVNKAEKN--NKMLVLLRNRIKVFYRPEGItGRVDQVSSALTFSV- 164
Cdd:PRK15249  91 QPKAGQVVRVIYNNTkKLPQDRESVFWFNVLQVPPTNIGSDSgqNKMLVMLRSRIKLFYRPDGL-GKPDNLAKKLQIKTv 169

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 910936648 165 --RQQGSNVVVtgKNPTGFFATIASGEVIGSGKNLKMKSEMIPPMSQVEWVIPN--SSAPSNPVINFRLVNDFGGQDSGS 240
Cdd:PRK15249 170 nkGSGKSGIVI--VNPQPWFASLSNLNVKVNGASYNLDADMIAPFSSQTWWLPGkrSLKSFSGTVTVTLVNDQGARISES 247


                 ...
gi 910936648 241 YRI 243
Cdd:PRK15249 248 YDV 250
PapD_N pfam00345
Pili and flagellar-assembly chaperone, PapD N-terminal domain; C2 domain-like beta-sandwich ...
 29-149 8.56e-54

Pili and flagellar-assembly chaperone, PapD N-terminal domain; C2 domain-like beta-sandwich fold. This domain is the n-terminal part of the PapD chaperone protein for pilus and flagellar assembly.


Pssm-ID: 425623  Cd Length: 123  Bit Score: 169.31  E-value: 8.56e-54
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 910936648   29 VVMGGSRIIYSAGEKEHTVQLTNNDNFPNAVQVWLDSGDAKSTPDTGKAPFLVTPPFFRMEANAGQTLRLKYTGSGLPTN 108
Cdd:pfam00345   1 VVLGGTRVIYPAGEKEASVTVSNTGDNPYLVQSWVDDGNEEGTDEKAKAPFIVTPPLFRLEPGQEQVLRIYTTGPPLPTD 80

                          90       100       110       120
                  ....*....|....*....|....*....|....*....|..
gi 910936648  109 KESIFYLNFLQVPPVNKA-EKNNKMLVLLRNRIKVFYRPEGI 149
Cdd:pfam00345  81 RESLFWLNVLEIPPKDKPkGGQNGLQLALRSRIKLFYRPAGL 122
PRK15246 PRK15246
fimbrial assembly chaperone;
18-234 3.12e-39

fimbrial assembly chaperone;


Pssm-ID: 185158 [Multi-domain]  Cd Length: 233  Bit Score: 135.86  E-value: 3.12e-39
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 910936648  18 MFMGISFANASVVMGGSRIIYSAGEKEHTVQLTNNDNFPNAVQVWLDSGDAKSTPDTGKAPFLVTPPFFRMEANAGQTLR 97
Cdd:PRK15246   1 LTGWYGPAQAAVNIDRTRIIFASDDVAQSLTLSNDNTTPMLLQVWTDAGNIDASPDNSKTPLVALPPVFKMQPGELRTLR 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 910936648  98 LKYTG-SGLPTNKESIFYLNFLQVPPVNKAEKN--NKMLVLLRNRIKVFYRPEGITGRVDQVSSALTFSVRQQGSNVVvt 174
Cdd:PRK15246  81 LLLSSrQQLATDRESLFWLNIYQIPPVTQDIKNhpRKLVLPLRLRLKILIRPTGLKAPTEAEEKKLRFIAKENTIRIV-- 158

                        170       180       190       200       210       220
                 ....*....|....*....|....*....|....*....|....*....|....*....|
gi 910936648 175 gkNPTGFFATIASgEVIgsgKNLKMKSEMIPPMSQVEWVIPNSSAPSNPvINFRLVNDFG 234
Cdd:PRK15246 159 --NPTSWYMSLTL-TMD---NKKSIGDIMVAPKTALDVPLTRSPTPGAS-INYAVINDSG 211
PRK15299 PRK15299
fimbrial chaperone protein StiB; Provisional
 27-235 5.52e-37

fimbrial chaperone protein StiB; Provisional


Pssm-ID: 185199 [Multi-domain]  Cd Length: 227  Bit Score: 129.90  E-value: 5.52e-37
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 910936648  27 ASVVMGGSRIIYSAGEKEHTVQLTNNDNFPNAVQVWLDSgdAKSTPDTGKAPFLVTPPFFRMEANAGQTLRLKYTGSGLP 106
Cdd:PRK15299  22 AGINIGTTRVIFHGDAKDASISISNSDNVPYLIQSWAQS--ISETGASGDAPFMVTPPLFRLNGGQKNVLRIIRTGGNLP 99

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 910936648 107 TNKESIFYLNFLQVPPVNKAEKNNKMLVLLRNRIKVFYRPEGITGRVDQVSSALTFSvrQQGSNVVVtgKNPTGFFATIA 186
Cdd:PRK15299 100 EDRESLYWLDIKSIPSSNPDNKHNTLMLAVKAEFKLIYRPKALTQKPEEVADRLTWS--RQGRTLTV--KNPTPYYMNFA 175

                        170       180       190       200
                 ....*....|....*....|....*....|....*....|....*....
gi 910936648 187 SGEVigsGKNLKMKSEMIPPMSQVEWVIPnsSAPSNPvINFRLVNDFGG 235
Cdd:PRK15299 176 TLSV---GSQKVKAPRYVAPFGNAQYTLP--AAASGP-IAWSIINDFGG 218
PRK15218 PRK15218
fimbrial assembly chaperone;
25-195 1.96e-36

fimbrial assembly chaperone;


Pssm-ID: 185140 [Multi-domain]  Cd Length: 226  Bit Score: 128.18  E-value: 1.96e-36
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 910936648  25 ANASVVMGGSRIIYSAGEKEHTVQLTNNDNFPNAVQVWLDSGDAKSTPDTGKAPFLVTPPFFRMEANAGQTLRLKYTGSG 104
Cdd:PRK15218  16 AWSGIYIYGTRIIYPAQKKDITVQLMNDGKRSSLIQAWIDNGDTSLPPEKLQVPFIMTPPVIRVAANSGQQLKIKKLANN 95

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 910936648 105 LPTNKESIFYLNFLQVPPvNKAEKNNKMLV--LLRNRIKVFYRPEGITgRVDQVSSALTFSVRQQGSnvvVTGKNPTGFF 182
Cdd:PRK15218  96 LPGDRESLFYLNVLDIPP-NSDENKDKNIIkfALQNRIKLIYRPPGVQ-KVDKATFSRLQLLRAPGS---ISVKNNSANW 170

                        170
                 ....*....|...
gi 910936648 183 ATIAsgEVIGSGK 195
Cdd:PRK15218 171 ITIP--EIKAKSK 181
PRK15253 PRK15253
putative fimbrial assembly chaperone protein StcB; Provisional
 12-208 1.43e-35

putative fimbrial assembly chaperone protein StcB; Provisional


Pssm-ID: 185165 [Multi-domain]  Cd Length: 242  Bit Score: 126.70  E-value: 1.43e-35
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 910936648  12 LFATLVMFMGISFANASVVMGGSRIIYSAGEKEHTVQLTNNDNFPNAVQVWLDSGDAKSTPDTGKAPFLVTPPFFRMEAN 91
Cdd:PRK15253  18 ILSAVLLSAIILPAHAGIVIYGTRVIYPAEKKEVVVQLVNQGEQASLVQSWIDDGNTSLPPEKIQVPFMLTPPVARVAAE 97

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 910936648  92 AGQTLRLKYTGSGLPTNKESIFYLNFLQVPPVNKAEKNNKMLVL-LRNRIKVFYRPEGITGrVDQVSSALTFSVRqqgSN 170
Cdd:PRK15253  98 SGQQIKIKKMPNSLPDNKESLFYLNVLDIPPNSQENAGKNVLKFaMQNRIKLIWRPSRIAA-VTKDSFQRIGLFR---SN 173

                        170       180       190
                 ....*....|....*....|....*....|....*...
gi 910936648 171 VVVTGKNPTGFFATIAsgEVIGSGKNLKMKSEMIPPMS 208
Cdd:PRK15253 174 KTVIMKNDTANWITVT--DVKAGNTKINDQTIMLPPLS 209
PRK15295 PRK15295
fimbrial assembly chaperone;
10-234 7.25e-35

fimbrial assembly chaperone;


Pssm-ID: 237936 [Multi-domain]  Cd Length: 226  Bit Score: 124.29  E-value: 7.25e-35
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 910936648  10 RYLFATLVMFMGISFANASVVMGGSRIIYSAGEKEHTVQLTNNDNFPNAVQVWLDSGDAKSTpdtGKAPFLVTPPFFRME 89
Cdd:PRK15295   2 HIKKSVLVVLLTSHVAHASIVVGGTRLVFDGNNDESSINVENKDSKANLVQSWLSVVDPQVT---NKQAFIITPPLFRLD 78

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 910936648  90 ANAGQTLRLKYTGSGLPTNKESIFYLNFLQVPPVNKAEKNNKMLVLLRNRIKVFYRPEGITGRV-DQVSSALTFsvrqQG 168
Cdd:PRK15295  79 AGQKNSIRVIRSGAPLPADRESMYWLNIKGIPSIDDNASANRVEISINTQIKLIYRPPALTKSTpDSQSQQLKW----QT 154

                        170       180       190       200       210       220
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 910936648 169 SNVVVTGKNPTGFFATIASgeVIGSGKNLKmKSEMIPPMSQVEWVIPNSSAPSNPViNFRLVNDFG 234
Cdd:PRK15295 155 AGDVITVNNPTPYYMNFAS--VTLNSHEVK-SATFVPPKSSASFKLGSTAAPHGTV-TWRLISDYG 216
lfpB PRK15290
fimbrial chaperone;
16-234 2.76e-30

fimbrial chaperone;


Pssm-ID: 237934 [Multi-domain]  Cd Length: 243  Bit Score: 112.78  E-value: 2.76e-30
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 910936648  16 LVMFMG-ISFANASVVMGGSRIIYSAGEKEHTVQLTNND-NFPNAVQVWLDSgdaKSTPDTGKAPFLVTPPFFRMEANAG 93
Cdd:PRK15290  25 LSVFLGqPALTYAGVVIGGTRVVYLSNNPDKSISVFSKEeKIPYLIQAWVDP---FNKEDKSKAPFTVIPPVSRLEPSQE 101

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 910936648  94 QTLRLKYT-GSGLPTNKESIFYLNFLQVPPVNKAEKNNKMLVLLRNRIKVFYRPEGITGRVDQVSSALTFsvRQQGSNVV 172
Cdd:PRK15290 102 KVLRIIHTkGVSLPDDRESVFWLNIKNIPPSASNKATNSLEIAVKTRIKLFWRPASIRLIPEDAAPKVKW--RREGRNLI 179

                        170       180       190       200       210       220
                 ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 910936648 173 VTGKNPTgffaTIASGEVIGSGKNLKMKseMIPPMSQVEWVIPNSSAPSNpvINFRLVNDFG 234
Cdd:PRK15290 180 AENPNPI----HISVMDVIVDGHDVPLN--MIRPFETLTLPLPANSAGGQ--MTWRFINDYG 233
PRK15211 PRK15211
fimbrial chaperone;
10-235 2.25e-29

fimbrial chaperone;


Pssm-ID: 185133 [Multi-domain]  Cd Length: 229  Bit Score: 109.91  E-value: 2.25e-29
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 910936648  10 RYLFATLVMFMGISFANASVVMGGSRIIYSAGEKEHTVQLTNNDNFPNAVQVWLDSGDAKStpdtGKAPFLVTPPFFRME 89
Cdd:PRK15211   5 KWGLVSLLSLAVCGQAMAAFVLNGTRFIYDEGRKNISFEVTNQADQTYGGQVWIDNTTQGS----STVYMVPAPPFFKVR 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 910936648  90 ANAGQTLRLKYTGSGLPTNKESIFYLNFLQVPPVNKAEKNNKMLVLLRNRIKVFYRPEGITGRVDQVSSALTFSvrQQGS 169
Cdd:PRK15211  81 PKEKQIIRIMKTDSALPKDRESLFWLNVQEIPPKPKASEGNVLAVALNTQVKLIYRPKALKEGRENAEKNLQII--HRGG 158

                        170       180       190       200       210       220       230
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 910936648 170 NVVVtgKNPTGFFATIASGEVIGS----GKNLKMKSEMIPPMSQVEwvIPNSSAPSNpvINFRLVNDFGG 235
Cdd:PRK15211 159 ETYL--KNPTPYYFAVTGVKLNGQpvklSDRVMNEIAQLAPFSEVS--LGKLSLNGT--VTVQAVNDWGG 222
PRK15274 PRK15274
putative periplasmic fimbrial chaperone protein SteC; Provisional
 1-236 3.39e-27

putative periplasmic fimbrial chaperone protein SteC; Provisional


Pssm-ID: 185177 [Multi-domain]  Cd Length: 257  Bit Score: 104.86  E-value: 3.39e-27
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 910936648   1 MFNTHSYSYRYLFATlVMFMGISFANASVVMGGSRIIYSAGEKEHTVQLTN-NDNFPNAVQVWLDsgDAKSTPDTGKapF 79
Cdd:PRK15274   1 MNKTNHFKRQALIAS-VLLAAPLVSHSAIVPDRTRVIFNGNENSITVTLKNgNATLPYLAQAWLE--DDKFAKDTRY--F 75

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 910936648  80 LVTPPFFRMEANAGQTLRLKY--TGSGLPTNKESIFYLNFLQVPPvnKAEKNNKMLVLLRNRIKVFYRPEGITGRVDQVS 157
Cdd:PRK15274  76 TALPPLQRIEPKSDGQVKVQPlpAAASLPQDRESLFYFNVREIPP--KSDKPNTLQLALQTRIKFFYRPVAVARQVDKTH 153

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 910936648 158 SALT-FSVRQQGSNVVVtgKNPTGFFATIASGeviGSGKNLK---MKSEMIPPMSQVEWVIPNSSAPSNPVINFrlVNDF 233
Cdd:PRK15274 154 PWQTkLTLTYQGDGVIF--DNPTPFYLVISNA---GSKENETasgFKNLLIAPREKVTSPIKGASLGSSPVVGY--VDDY 226


                 ...
gi 910936648 234 GGQ 236
Cdd:PRK15274 227 GGH 229
PRK15195 PRK15195
molecular chaperone FimC;
16-234 3.52e-25

molecular chaperone FimC;


Pssm-ID: 185117 [Multi-domain]  Cd Length: 229  Bit Score: 98.78  E-value: 3.52e-25
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 910936648  16 LVMFMGISF-ANASVVMGGSRIIYSAGEKEHTVQLTNND-NFPNAVQVWL--DSGDAKSTpdtgkapFLVTPPFFRMEAN 91
Cdd:PRK15195  13 FYLIISASVhAAGGIALGATRVIYPADAKQTSLAIRNSHtNERYLVNSWIenSSGVKEKS-------FIVTPPLFVSEPK 85

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 910936648  92 AGQTLRLKYTGSGLPTNKESIFYLNFLQVPPVNKA--EKNNKMLVLLRNRIKVFYRPEGITGRVDQVSSALTFSvrQQGS 169
Cdd:PRK15195  86 SENTLRIIYAGPPLAADRESLFWMNVKAIPSVDKNalEGRNVLQLAILSRIKLFVRPINLQELPEEAPDTLKFS--RSGN 163

                        170       180       190       200       210       220
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 910936648 170 NVVVTgkNPTGFFATIASGEVIGSgknlKMKSEMIPPMSQVEWVIPNSSAPSnpvINFRLVNDFG 234
Cdd:PRK15195 164 HLKVH--NPSPYYVTLVNLQVGSQ----KLGNAMIAPKVNSQIPLPSGVQGK---LKFQTVNDYG 219
PRK15224 PRK15224
pili assembly chaperone PapD;
28-236 4.29e-25

pili assembly chaperone PapD;


Pssm-ID: 185146 [Multi-domain]  Cd Length: 237  Bit Score: 99.05  E-value: 4.29e-25
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 910936648  28 SVVMGGSRIIYSAGEKEHTVQLTNNDNFPNAVQVWLDSGDaKSTPdtgkAPFLVTPPFFRMEANAGQTLRLKYTGSGLPT 107
Cdd:PRK15224  29 SVKLGATRVIYHAGTAGATLSVSNPQNYPILVQSSVKAAD-KSSP----APFLVMPPLFRLEANQQSQLRIVRTGGDMPT 103

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 910936648 108 NKESIFYLNFLQVPPVNKAEKNNKMLVLLRNRI------KVFYRPEGITGRVDQVSSALTFSvrQQGSNVVVtgKNPTGF 181
Cdd:PRK15224 104 DRETLQWVCIKAVPPENEPSDTQAKGATLDLNLsinvcdKLIFRPDAVKGTPEDVAGNLRWV--ETGNKLKV--ENPTPF 179

                        170       180       190       200       210
                 ....*....|....*....|....*....|....*....|....*....|....*
gi 910936648 182 FATIASgeVIGSGKNLkMKSEMIPPMSQVEWVIPNSSAPSnpvINFRLVNDFGGQ 236
Cdd:PRK15224 180 YMNLAS--VTVGGKPI-TGLEYIPPFADKTLNMPGSAHGD---IEWRVITDFGGE 228
PRK15192 PRK15192
pili/flagellar-assembly chaperone;
19-185 6.71e-24

pili/flagellar-assembly chaperone;


Pssm-ID: 185114 [Multi-domain]  Cd Length: 234  Bit Score: 95.92  E-value: 6.71e-24
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 910936648  19 FMGISFANASVVMGGSRIIYSAGEKEHTVQLTNNDNFPNAVQVWLDSGDA-KSTPDTGKA-PFLVTPPFFRMEANAGQTL 96
Cdd:PRK15192  14 LLPISWAQAGVVIGGTRFIYHAGAPALSVPVSNHSEASWLIDTHILPGGRwPGTKNEGNItPFVVTPPLFMLSARQENSM 93

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 910936648  97 RLKYTGSGLPTNKESIFYLNFLQVPPvNKAEKnNKMLVLLRNRIKVFYRPEGITGRVDQVSSALTFSVRQQGSNVvvtgK 176
Cdd:PRK15192  94 RVVYTGAPLPADRESLFTLSIAAIPS-GKPEA-NRVQMAFRSALKLLYRPEGLAGNPQQAYRHLIWSLTPDGATV----R 167


                 ....*....
gi 910936648 177 NPTGFFATI 185
Cdd:PRK15192 168 NPTPYYVTL 176
PRK15208 PRK15208
molecular chaperone LpfB;
10-234 7.12e-24

molecular chaperone LpfB;


Pssm-ID: 237925 [Multi-domain]  Cd Length: 228  Bit Score: 95.36  E-value: 7.12e-24
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 910936648  10 RYLFATLVMFMGISFANAS-VVMGGSRIIYSAGEKEHTVQLTN-NDNFPNAVQVWLDSGDAKStpdtgKAPFLVTPPFFR 87
Cdd:PRK15208   3 LISFTALALALIAQNSFAGgVALSSTRVIYDGSKKEASLTVNNkSKTEEFLIQSWIDDANGNK-----KTPFIITPPLFK 77

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 910936648  88 MEANAGQTLRLKYTGSGLPTNKESIFYLNFLQVPPVN-KAEKNNKMLVLLRNRIKVFYRPEGITGRVDQVSSALTFSvrQ 166
Cdd:PRK15208  78 LDPTKNNVLRIVNITNTLPQDRESVYWINVKAIPAKSeDAENKNVLQIAVRTRLKLFYRPAGLKGNSMDAWNKLRFT--R 155

                        170       180       190       200       210       220
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 910936648 167 QGSNVVVtgKNPTGFfaTIASGEVIGSGKNLKmKSEMIPPMSQVEWVIPNSSAPSNPvINFRLVNDFG 234
Cdd:PRK15208 156 AGNQIKV--ENPSAF--NLTFNQFYANGRDIE-KAGMVPAKGSLNIELPAGTGKVSE-VKYNIINDFG 217
PRK15188 PRK15188
fimbrial chaperone protein BcfB; Provisional
 12-235 8.10e-24

fimbrial chaperone protein BcfB; Provisional


Pssm-ID: 185110 [Multi-domain]  Cd Length: 228  Bit Score: 95.21  E-value: 8.10e-24
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 910936648  12 LFATLVMFM---GISFA--NASVVMGGSRIIYSAGEKEHTVQLTNN-DNFPNAVQVWLDSGDAKSTPDtgkapFLVTPPF 85
Cdd:PRK15188   7 IFLRLLLLLsaaGLSFAaqAGGIALGATRVIYPQGSKQTSLPIINSsASNVFLIQSWVANADGSRSTD-----FIITPPL 81

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 910936648  86 FRMEANAGQTLRLKYTGSGLPTNKESIFYLNFLQVPPVNKAE-KNNKMLVLLRNRIKVFYRPEGITGRvdQVSSALTFSV 164
Cdd:PRK15188  82 FVIQPKKENILRIMYVGPSLPTDRESVFYLNSKAIPSVDKNKlTGNSLQIATQSVIKLFIRPKNLAEA--PAHAPSTLRC 159

                        170       180       190       200       210       220       230
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 910936648 165 RQQGSNVVVTgkNPTGFFATIAsgEVIGSGKnlKMKSEMIPPMSQVewvipnsSAPSNP-VINFRLVNDFGG 235
Cdd:PRK15188 160 RNERGQLTIT--NPSPYYVSMV--ELYSAGK--KLPNTMVPPKGAI-------TLPATPgQVSLRTVNDFGA 218
PRK15285 PRK15285
fimbrial chaperone StfD;
10-236 9.01e-23

fimbrial chaperone StfD;


Pssm-ID: 185185 [Multi-domain]  Cd Length: 250  Bit Score: 93.31  E-value: 9.01e-23
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 910936648  10 RYLFATLVMFM--GISFANASVVMGGSRIIYSAGEKEHTVQLTN-NDNFPNAVQVWLDsgDAKSTPDTgkAPFLVTPPFF 86
Cdd:PRK15285   6 RYNLAAVLLLLlgGYGSAQAAIAPDRTRLVFRGEDKSISVDLKNaNSKLPYLAQSWVE--DEKGVKIT--SPLIVVPPVQ 81

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 910936648  87 RMEANA-GQtlrLKYTG----SGLPTNKESIFYLNFLQVPPvnKAEKNNKMLVLLRNRIKVFYRPEGITGRVDQVSSALT 161
Cdd:PRK15285  82 RIEPSAiGQ---VKIQGmpalASLPQDRETLFYYNVREIPP--QSDKPNTLQIALQTRIKVFYRPQALSKIDMQHPWQYK 156

                        170       180       190       200       210       220       230
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 910936648 162 FSVRQQGSNVVVTgkNPTGFFATIASGEVIGSGKNLKMKSEM-IPPMSQVEWVIPNSSAPSNPVINFrlVNDFGGQ 236
Cdd:PRK15285 157 ITLQRQGNGYQVS--NPTGYYVVLSNASNRMDGTPARGFSPLvIAPKSNVTLGGDASELGHSPVLTY--VNDYGAR 228
PRK11385 PRK11385
fimbrial chaperone;
1-235 4.36e-19

fimbrial chaperone;


Pssm-ID: 183112 [Multi-domain]  Cd Length: 236  Bit Score: 82.87  E-value: 4.36e-19
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 910936648   1 MFNTHSYSYRYLFATLVMFMGiSFANASVVMGGSRIIYSAGEKEHTVQLTNNDNfpnavQVWL-----------DSGDAK 69
Cdd:PRK11385   1 MTNTWNRLALLIFAVLSLLVA-GELQAGVVVGGTRFIFPADRESISILLTNTSQ-----ESWLinskinrptrwAGGEAS 74

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 910936648  70 STPdtgkAPFLVTPPFFRMEANAGQTLRLKYTGSG-LPTNKESIFYLNFLQVPPvNKAEkNNKMLVLLRNRIKVFYRPEG 148
Cdd:PRK11385  75 TVP----APLLAAPPLILLKPGTTGTLRLLRTESDiLPVDRETLFELSIASVPS-GKVE-NQSVKVAMRSVFKLFWRPEG 148

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 910936648 149 ITGRVDQVSSALTFSVRQQGSNVVvtgkNPTGFFATIASGEVigSGKNLKmKSEMIPPMSQVEWVIPNSSAPSNpvINFR 228
Cdd:PRK11385 149 LPGDPLEAYQQLRWTRNSQGVQLT----NPTPYYINLIQVSV--NGKALS-NAGVVPPKSQRQTSWCQAIAPCH--VAWR 219


                 ....*..
gi 910936648 229 LVNDFGG 235
Cdd:PRK11385 220 AINDYGG 226
PRK15233 PRK15233
fimbrial chaperone SefB;
31-187 2.44e-17

fimbrial chaperone SefB;


Pssm-ID: 185149 [Multi-domain]  Cd Length: 246  Bit Score: 78.23  E-value: 2.44e-17
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 910936648  31 MGGSRIIYSAGEKEHTVQLTNNDNFPNAVQVWLDSGDAKStpdtgKAPFLVTPPFFRMEANAGQTLRLKYTGSGLPTNKE 110
Cdd:PRK15233  44 LGTTRVIYKEDAPSTSFWIMNEKEYPILVQTQVYNDDKSS-----KAPFIVTPPILKVESNARTRLKVIPTSNLFNKNEE 118

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 910936648 111 SIFYLNFLQVPPVNKAEKNNK--------MLVLLRNRIKVFYRPEGITGRVDQVSSALtfSVRQQGSNVVVtgKNPTGFF 182
Cdd:PRK15233 119 SLYWLCVKGVPPLNDNESNNKnnittnlnVNVVTNSCIKLIYRPKTIDLTTMEIADKL--KLERKGNSIVI--KNPTSSY 194


                 ....*
gi 910936648 183 ATIAS 187
Cdd:PRK15233 195 VNIAN 199
PRK15254 PRK15254
fimbrial chaperone protein StdC; Provisional
 24-241 2.21e-16

fimbrial chaperone protein StdC; Provisional


Pssm-ID: 185166 [Multi-domain]  Cd Length: 239  Bit Score: 75.58  E-value: 2.21e-16
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 910936648  24 FANASVVMGGSRIIYSAGEKEHTVQLTNND-NFPNAVQVWLDSGDAKSTPdtgkaPFLVTPPFFRMEANAGQTLRL---K 99
Cdd:PRK15254  13 YSPAAVNVDRTRIIMDAPQKTVAITLNNDDkTTPFLAQSWVTDADGVRTD-----ALMALPPLQRIDAGQKSQVRItqvR 87

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 910936648 100 YTGSGLPTNKESIFYLNFLQVPPvnKAEKNNKMLVLLRNRIKVFYRPEGIT-GRVDQVSSALTfSVRQQGSnvvVTGKNP 178
Cdd:PRK15254  88 GLTDKLPQDRETLFWFNVRGVPP--KPEDDNVLQLAMQSQLKLFYRPKAIIrSSSDQPERKLT-AERNAGH---LTLRNP 161

                        170       180       190       200       210       220
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 910936648 179 TGFFATIASgevIGSGKNLKMK--SE--MIPPMSQ--VEWVIPNSSApsnpVINFRLVNDFGGQDSGSY 241
Cdd:PRK15254 162 TPYYITVAW---LGADRSHRLSgfREgvMVPPLGSlpLKAVLPAETR----TLWVGYIDDYGGLQMNRY 223
PapD_C pfam02753
Pili assembly chaperone PapD, C-terminal domain; Ig-like beta-sandwich fold. This domain is ...
 176-238 5.05e-12

Pili assembly chaperone PapD, C-terminal domain; Ig-like beta-sandwich fold. This domain is the C-terminal part of the pilus and flagellar-assembly chaperone protein PapD.


Pssm-ID: 426960 [Multi-domain]  Cd Length: 63  Bit Score: 59.20  E-value: 5.05e-12
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|...
gi 910936648  176 KNPTGFFATIASGEVIGSGKNLKMKSEMIPPMSQVEWVIPNSSAPSNPViNFRLVNDFGGQDS 238
Cdd:pfam02753   2 KNPTPYYVTFSSLSLGGGGKELALDPGMVAPFSSQTFAGLPAPAAGGTV-SYTYINDYGGIVP 63
PRK09918 PRK09918
putative fimbrial chaperone protein; Provisional
 3-178 7.32e-07

putative fimbrial chaperone protein; Provisional


Pssm-ID: 236632 [Multi-domain]  Cd Length: 230  Bit Score: 48.50  E-value: 7.32e-07
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 910936648   3 NTHSYSYRYLFATLVMFMGISFAnASVVMGGSRIIYSAGEKEHTVQLTNNDNFPnavqVWLDSGDAKSTPDTGKApFLVT 82
Cdd:PRK09918   1 NRFNLFFLFTALVLLSSSSAVHA-AGMVPETSVVIVEESDGEGSINVKNTDSNP----ILLYTTLVDLPEDKSKL-LLVT 74

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 910936648  83 PPFFRMEANAGQTLRLKYTgSGLPTNKESIFYLNFLQVPPvnKAEKNNKMLVLLRNRIKVFYRPEGITgRVDQVSSALTF 162
Cdd:PRK09918  75 PPVARVEPGQSQQVRFILK-SGSPLNTEHLLRVSFEGVPP--KPGGKNKVVMPIRQDLPVLIQPAALP-VVRDPWKLLVW 150

                        170
                 ....*....|....*.
gi 910936648 163 SVrqQGSNVVVtgKNP 178
Cdd:PRK09918 151 SI--SGNNLVV--SNP 162
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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