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Conserved domains on  [gi|912919789|ref|WP_050307758|]
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MucBP domain-containing protein, partial [Streptococcus agalactiae]

Protein Classification

MucBP domain-containing protein( domain architecture ID 10534210)

MucBP (Mucin-Binding Protein) domain-containing protein

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
MucBP pfam06458
MucBP domain; The MucBP (MUCin-Binding Protein) domain is found in a wide variety of bacterial ...
 330-389 4.44e-10

MucBP domain; The MucBP (MUCin-Binding Protein) domain is found in a wide variety of bacterial proteins, in several repeats. The domain is found in bacterial peptidoglycan bound proteins and is often found in conjunction with pfam00746 and pfam00560.


:

Pssm-ID: 461917 [Multi-domain]  Cd Length: 65  Bit Score: 55.43  E-value: 4.44e-10
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 912919789  330 VKYVDTEGKEVAKSRHFEGEEGAAFVTSAKEVAGYKLVRTE----GAVSNVFTAGAQVRTYVYE 389
Cdd:pfam06458   2 VNYVDEDGNELADSTTLTGKIGDTYTTEAKEIPGYTLVETPgnatGNATGTFTEEPQTVTYVYT 65
MucBP super family cl05785
MucBP domain; The MucBP (MUCin-Binding Protein) domain is found in a wide variety of bacterial ...
 402-435 9.37e-03

MucBP domain; The MucBP (MUCin-Binding Protein) domain is found in a wide variety of bacterial proteins, in several repeats. The domain is found in bacterial peptidoglycan bound proteins and is often found in conjunction with pfam00746 and pfam00560.


The actual alignment was detected with superfamily member pfam06458:

Pssm-ID: 461917 [Multi-domain]  Cd Length: 65  Bit Score: 34.63  E-value: 9.37e-03
                          10        20        30
                  ....*....|....*....|....*....|....
gi 912919789  402 VKYVDTEGKEVAKSRHFEGEEGAAFVTSAKEVAG 435
Cdd:pfam06458   2 VNYVDEDGNELADSTTLTGKIGDTYTTEAKEIPG 35
 
Name Accession Description Interval E-value
MucBP pfam06458
MucBP domain; The MucBP (MUCin-Binding Protein) domain is found in a wide variety of bacterial ...
 330-389 4.44e-10

MucBP domain; The MucBP (MUCin-Binding Protein) domain is found in a wide variety of bacterial proteins, in several repeats. The domain is found in bacterial peptidoglycan bound proteins and is often found in conjunction with pfam00746 and pfam00560.


Pssm-ID: 461917 [Multi-domain]  Cd Length: 65  Bit Score: 55.43  E-value: 4.44e-10
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 912919789  330 VKYVDTEGKEVAKSRHFEGEEGAAFVTSAKEVAGYKLVRTE----GAVSNVFTAGAQVRTYVYE 389
Cdd:pfam06458   2 VNYVDEDGNELADSTTLTGKIGDTYTTEAKEIPGYTLVETPgnatGNATGTFTEEPQTVTYVYT 65
MucBP pfam06458
MucBP domain; The MucBP (MUCin-Binding Protein) domain is found in a wide variety of bacterial ...
 402-435 9.37e-03

MucBP domain; The MucBP (MUCin-Binding Protein) domain is found in a wide variety of bacterial proteins, in several repeats. The domain is found in bacterial peptidoglycan bound proteins and is often found in conjunction with pfam00746 and pfam00560.


Pssm-ID: 461917 [Multi-domain]  Cd Length: 65  Bit Score: 34.63  E-value: 9.37e-03
                          10        20        30
                  ....*....|....*....|....*....|....
gi 912919789  402 VKYVDTEGKEVAKSRHFEGEEGAAFVTSAKEVAG 435
Cdd:pfam06458   2 VNYVDEDGNELADSTTLTGKIGDTYTTEAKEIPG 35
 
Name Accession Description Interval E-value
MucBP pfam06458
MucBP domain; The MucBP (MUCin-Binding Protein) domain is found in a wide variety of bacterial ...
 330-389 4.44e-10

MucBP domain; The MucBP (MUCin-Binding Protein) domain is found in a wide variety of bacterial proteins, in several repeats. The domain is found in bacterial peptidoglycan bound proteins and is often found in conjunction with pfam00746 and pfam00560.


Pssm-ID: 461917 [Multi-domain]  Cd Length: 65  Bit Score: 55.43  E-value: 4.44e-10
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 912919789  330 VKYVDTEGKEVAKSRHFEGEEGAAFVTSAKEVAGYKLVRTE----GAVSNVFTAGAQVRTYVYE 389
Cdd:pfam06458   2 VNYVDEDGNELADSTTLTGKIGDTYTTEAKEIPGYTLVETPgnatGNATGTFTEEPQTVTYVYT 65
MucBP pfam06458
MucBP domain; The MucBP (MUCin-Binding Protein) domain is found in a wide variety of bacterial ...
 402-435 9.37e-03

MucBP domain; The MucBP (MUCin-Binding Protein) domain is found in a wide variety of bacterial proteins, in several repeats. The domain is found in bacterial peptidoglycan bound proteins and is often found in conjunction with pfam00746 and pfam00560.


Pssm-ID: 461917 [Multi-domain]  Cd Length: 65  Bit Score: 34.63  E-value: 9.37e-03
                          10        20        30
                  ....*....|....*....|....*....|....
gi 912919789  402 VKYVDTEGKEVAKSRHFEGEEGAAFVTSAKEVAG 435
Cdd:pfam06458   2 VNYVDEDGNELADSTTLTGKIGDTYTTEAKEIPG 35
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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