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Conserved domains on  [gi|921168739|ref|WP_053114513|]
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MULTISPECIES: type IV pilus modification protein PilV [unclassified Marinobacter]

Protein Classification

PilV family protein( domain architecture ID 11471938)

PilV family protein

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
PilV COG4967
Type IV pilus assembly protein PilV [Cell motility, Extracellular structures];
1-78 1.48e-03

Type IV pilus assembly protein PilV [Cell motility, Extracellular structures];


:

Pssm-ID: 443993 [Multi-domain]  Cd Length: 86  Bit Score: 35.34  E-value: 1.48e-03
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 921168739   1 MFGISNPRSQRGFTLIEVLVALLVLLVGLLGVVGMQYLSLQQVNNANLRSQVNLHALEMVEMIRANDNAALTAGEVDS 78
Cdd:COG4967    1 MSRRRRRRRQRGFTLIEVLVALVILSIGLLGLAGLQAASLRSSQDARQRTQAALLAQDLLERLRANPAAAGSYPGIKS 78
 
Name Accession Description Interval E-value
PilV COG4967
Type IV pilus assembly protein PilV [Cell motility, Extracellular structures];
1-78 1.48e-03

Type IV pilus assembly protein PilV [Cell motility, Extracellular structures];


Pssm-ID: 443993 [Multi-domain]  Cd Length: 86  Bit Score: 35.34  E-value: 1.48e-03
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 921168739   1 MFGISNPRSQRGFTLIEVLVALLVLLVGLLGVVGMQYLSLQQVNNANLRSQVNLHALEMVEMIRANDNAALTAGEVDS 78
Cdd:COG4967    1 MSRRRRRRRQRGFTLIEVLVALVILSIGLLGLAGLQAASLRSSQDARQRTQAALLAQDLLERLRANPAAAGSYPGIKS 78
 
Name Accession Description Interval E-value
PilV COG4967
Type IV pilus assembly protein PilV [Cell motility, Extracellular structures];
1-78 1.48e-03

Type IV pilus assembly protein PilV [Cell motility, Extracellular structures];


Pssm-ID: 443993 [Multi-domain]  Cd Length: 86  Bit Score: 35.34  E-value: 1.48e-03
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 921168739   1 MFGISNPRSQRGFTLIEVLVALLVLLVGLLGVVGMQYLSLQQVNNANLRSQVNLHALEMVEMIRANDNAALTAGEVDS 78
Cdd:COG4967    1 MSRRRRRRRQRGFTLIEVLVALVILSIGLLGLAGLQAASLRSSQDARQRTQAALLAQDLLERLRANPAAAGSYPGIKS 78
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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