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Conserved domains on  [gi|922025449|ref|WP_053304706|]
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MULTISPECIES: electron transfer flavoprotein-ubiquinone oxidoreductase [Vibrio]

Protein Classification

electron transfer flavoprotein-ubiquinone oxidoreductase( domain architecture ID 11428947)

electron transfer flavoprotein-ubiquinone oxidoreductase accepts electrons from ETF and reduces ubiquinone

CATH:  3.30.70.20|3.30.9.90|3.50.50.60
EC:  1.5.5.1
Gene Ontology:  GO:0004174|GO:0022900|GO:0046872|GO:0051539
SCOP:  4000064|4000127

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
ETF_QO pfam05187
Electron transfer flavoprotein-ubiquinone oxidoreductase, 4Fe-4S; Electron-transfer ...
 442-543 1.80e-71

Electron transfer flavoprotein-ubiquinone oxidoreductase, 4Fe-4S; Electron-transfer flavoprotein-ubiquinone oxidoreductase (ETF-QO) in the inner mitochondrial membrane accepts electrons from electron-transfer flavoprotein which is located in the mitochondrial matrix and reduces ubiquinone in the mitochondrial membrane. The two redox centres in the protein, FAD and a [4Fe4S] cluster, are present in a 64-kDa monomer.


:

Pssm-ID: 461576 [Multi-domain]  Cd Length: 104  Bit Score: 223.26  E-value: 1.80e-71
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 922025449  442 GVLSFDRLSSVYLSNIFHEEDQPCHLRLENQRIPIEQNLELYAEPAQRYCPAGVYEIVQGEQ--QPELQINAANCIHCKT 519
Cdd:pfam05187   1 GVLTFDRLTSVYLSGTNHEEDQPCHLKLKDPEVPIKVNLPKYAGPEQRYCPAGVYEYVEDEEpgGPRLQINAQNCVHCKT 80

                          90       100
                  ....*....|....*....|....
gi 922025449  520 CDIKDPSQNITWTPPEGGGGPNYP 543
Cdd:pfam05187  81 CDIKDPTQNITWVVPEGGGGPNYP 104
FixC COG0644
Dehydrogenase (flavoprotein) [Energy production and conversion];
15-372 2.66e-64

Dehydrogenase (flavoprotein) [Energy production and conversion];


:

Pssm-ID: 440409 [Multi-domain]  Cd Length: 281  Bit Score: 211.36  E-value: 2.66e-64
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 922025449  15 AGPAGLSAACRikqLAaekKQDLSVCVVEKGSEVGAHILSGAVFeTRSLDELFPDWEEkgAPLNTKVNQDKTYYLGNDin 94
Cdd:COG0644    1 AGPAGSAAARR---LA---RAGLSVLLLEKGSFPGDKICGGGLL-PRALEELEPLGLD--EPLERPVRGARFYSPGGK-- 69

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 922025449  95 GHELPSWavpntlhNKGNYIISLGSLCRWMALQAENLGVEVYPGFTASQAIIDEDsRVCgVITGDmgldkngeqkgnfep 174
Cdd:COG0644   70 SVELPPG-------RGGGYVVDRARFDRWLAEQAEEAGAEVRTGTRVTDVLRDDG-RVV-VRTGD--------------- 125

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 922025449 175 GIELRAKFTLFAEGARGHIGKQLINRfnlAEEKTPQHYAIGFKELWEIPSEQH-QQGLVVHGLGwplSNEATGGSYLYHL 253
Cdd:COG0644  126 GEEIRADYVVDADGARSLLARKLGLK---RRSDEPQDYALAIKEHWELPPLEGvDPGAVEFFFG---EGAPGGYGWVFPL 199

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 922025449 254 EGNQVAVGlivdlnyknphlspfdefqrfkhhplieqylkngkrISYGaraitkggfHSLPTQQFAGGLLIGCDAGTLNG 333
Cdd:COG0644  200 GDGRVSVG------------------------------------IPLG---------GPRPRLVGDGVLLVGDAAGFVDP 234

                        330       340       350       360
                 ....*....|....*....|....*....|....*....|...
gi 922025449 334 AKIKGTHTAIKSGMLAAEAVCEALESQSVTAD----YQKHFKQ 372
Cdd:COG0644  235 LTGEGIHLAMKSGRLAAEAIAEALEGGDFSAEalaeYERRLRE 277
 
Name Accession Description Interval E-value
ETF_QO pfam05187
Electron transfer flavoprotein-ubiquinone oxidoreductase, 4Fe-4S; Electron-transfer ...
 442-543 1.80e-71

Electron transfer flavoprotein-ubiquinone oxidoreductase, 4Fe-4S; Electron-transfer flavoprotein-ubiquinone oxidoreductase (ETF-QO) in the inner mitochondrial membrane accepts electrons from electron-transfer flavoprotein which is located in the mitochondrial matrix and reduces ubiquinone in the mitochondrial membrane. The two redox centres in the protein, FAD and a [4Fe4S] cluster, are present in a 64-kDa monomer.


Pssm-ID: 461576 [Multi-domain]  Cd Length: 104  Bit Score: 223.26  E-value: 1.80e-71
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 922025449  442 GVLSFDRLSSVYLSNIFHEEDQPCHLRLENQRIPIEQNLELYAEPAQRYCPAGVYEIVQGEQ--QPELQINAANCIHCKT 519
Cdd:pfam05187   1 GVLTFDRLTSVYLSGTNHEEDQPCHLKLKDPEVPIKVNLPKYAGPEQRYCPAGVYEYVEDEEpgGPRLQINAQNCVHCKT 80

                          90       100
                  ....*....|....*....|....
gi 922025449  520 CDIKDPSQNITWTPPEGGGGPNYP 543
Cdd:pfam05187  81 CDIKDPTQNITWVVPEGGGGPNYP 104
FixC COG0644
Dehydrogenase (flavoprotein) [Energy production and conversion];
15-372 2.66e-64

Dehydrogenase (flavoprotein) [Energy production and conversion];


Pssm-ID: 440409 [Multi-domain]  Cd Length: 281  Bit Score: 211.36  E-value: 2.66e-64
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 922025449  15 AGPAGLSAACRikqLAaekKQDLSVCVVEKGSEVGAHILSGAVFeTRSLDELFPDWEEkgAPLNTKVNQDKTYYLGNDin 94
Cdd:COG0644    1 AGPAGSAAARR---LA---RAGLSVLLLEKGSFPGDKICGGGLL-PRALEELEPLGLD--EPLERPVRGARFYSPGGK-- 69

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 922025449  95 GHELPSWavpntlhNKGNYIISLGSLCRWMALQAENLGVEVYPGFTASQAIIDEDsRVCgVITGDmgldkngeqkgnfep 174
Cdd:COG0644   70 SVELPPG-------RGGGYVVDRARFDRWLAEQAEEAGAEVRTGTRVTDVLRDDG-RVV-VRTGD--------------- 125

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 922025449 175 GIELRAKFTLFAEGARGHIGKQLINRfnlAEEKTPQHYAIGFKELWEIPSEQH-QQGLVVHGLGwplSNEATGGSYLYHL 253
Cdd:COG0644  126 GEEIRADYVVDADGARSLLARKLGLK---RRSDEPQDYALAIKEHWELPPLEGvDPGAVEFFFG---EGAPGGYGWVFPL 199

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 922025449 254 EGNQVAVGlivdlnyknphlspfdefqrfkhhplieqylkngkrISYGaraitkggfHSLPTQQFAGGLLIGCDAGTLNG 333
Cdd:COG0644  200 GDGRVSVG------------------------------------IPLG---------GPRPRLVGDGVLLVGDAAGFVDP 234

                        330       340       350       360
                 ....*....|....*....|....*....|....*....|...
gi 922025449 334 AKIKGTHTAIKSGMLAAEAVCEALESQSVTAD----YQKHFKQ 372
Cdd:COG0644  235 LTGEGIHLAMKSGRLAAEAIAEALEGGDFSAEalaeYERRLRE 277
FixX COG2440
Ferredoxin-like protein FixX [Energy production and conversion];
452-545 1.52e-44

Ferredoxin-like protein FixX [Energy production and conversion];


Pssm-ID: 441981 [Multi-domain]  Cd Length: 87  Bit Score: 152.28  E-value: 1.52e-44
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 922025449 452 VYLSNIFHEEDQPcHLRLENQRIPIEQNLelyAEPAQRYCPAGVYEIVQGeqqPELQINAANCIHCKTCDIKDPSQNITW 531
Cdd:COG2440    1 LFLNNYNVDEDQP-HIKVKDPDICIARCL---AKPCTRYCPAGVYEIVGD---GRLQINYENCLECGTCRIKCPTQNITW 73

                         90
                 ....*....|....
gi 922025449 532 TPPEGGGGPNYPNM 545
Cdd:COG2440   74 VYPEGGGGVNYRFG 87
PRK10015 PRK10015
oxidoreductase; Provisional
 7-383 3.71e-33

oxidoreductase; Provisional


Pssm-ID: 182194 [Multi-domain]  Cd Length: 429  Bit Score: 131.25  E-value: 3.71e-33
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 922025449   7 EFDVLIVGAGPAGLSAACRIKqlaaekKQDLSVCVVEKGSEVGAHILSGAVFETRSLDELFPDWEEKgAPLNTKVNQDKT 86
Cdd:PRK10015   5 KFDAIVVGAGVAGSVAALVMA------RAGLDVLVIERGDSAGCKNMTGGRLYAHTLEAIIPGFAAS-APVERKVTREKI 77

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 922025449  87 YYLGND----INGHELPSWAVPntlhnKGNYIISLGSLCRWMALQAENLGVEVYPGFTASqAIIDEDSRVCGVITGDMGL 162
Cdd:PRK10015  78 SFLTEEsavtLDFHREQPDVPQ-----HASYTVLRNRLDPWLMEQAEQAGAQFIPGVRVD-ALVREGNKVTGVQAGDDIL 151

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 922025449 163 DKNgeqkgnfepgielrakFTLFAEGARGHIGKQLinrfNLAEEKTPQHYAIGFKELWEIPSEQHQQ--GLVVH-GLGWP 239
Cdd:PRK10015 152 EAN----------------VVILADGVNSMLGRSL----GMVPASDPHHYAVGVKEVIGLTPEQINDrfNITGEeGAAWL 211

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 922025449 240 L----SNEATGGSYLYhLEGNQVAVGLIVDL-NYKNPHLSPFDEFQRFKHHPLIEQYLKNGKRISYGARAITKGGFHSLP 314
Cdd:PRK10015 212 FagspSDGLMGGGFLY-TNKDSISLGLVCGLgDIAHAQKSVPQMLEDFKQHPAIRPLISGGKLLEYSAHMVPEGGLAMVP 290

                        330       340       350       360       370       380       390
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 922025449 315 TQQFAGGLLIGCDAG-TLN-GAKIKGTHTAIKSGMLAAEAVCEALESQ----SVTADYQKHFKQSWLYEELYQAR 383
Cdd:PRK10015 291 QLVNDGVMIVGDAAGfCLNlGFTVRGMDLAIASAQAAATTVIAAKERAdfsaSSLAQYKRELEQSCVMRDMQHFR 365
GG-red-SF TIGR02032
geranylgeranyl reductase family; This model represents a subfamily which includes ...
 8-353 1.96e-10

geranylgeranyl reductase family; This model represents a subfamily which includes geranylgeranyl reductases involved in chlorophyll and bacteriochlorophyll biosynthesis as well as other related enzymes which may also act on geranylgeranyl groups or related substrates. [Biosynthesis of cofactors, prosthetic groups, and carriers, Chlorophyll and bacteriochlorphyll]


Pssm-ID: 273936 [Multi-domain]  Cd Length: 295  Bit Score: 61.95  E-value: 1.96e-10
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 922025449    8 FDVLIVGAGPAGLSAACRIkqlaaeKKQDLSVCVVEKGSEVGAHILSGAVfETRSLDELFPDWEekgAPLNTKVnqDKTY 87
Cdd:TIGR02032   1 YDVVVVGAGPAGASAAYRL------ADKGLRVLLLEKKSFPRYKPCGGAL-SPRALEELDLPGE---LIVNLVR--GARF 68

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 922025449   88 YLGNDINgHELPSWAVPntlhnkgNYIISLGSLCRWMALQAENLGVEVYPGFTASQAIIDEDSRVCGVITGdmgldknge 167
Cdd:TIGR02032  69 FSPNGDS-VEIPIETEL-------AYVIDRDAFDEQLAERAQEAGAELRLGTRVLDVEIHDDRVVVIVRGS--------- 131

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 922025449  168 qkgnfepGIELRAKFTLFAEGARGHIGKQLinrfNLAEEKTPqhYAIGFKELWEIPSEQHQQ---------GLVVHGLGW 238
Cdd:TIGR02032 132 -------EGTVTAKIVIGADGSRSIVAKKL----GLKKEPRE--YGVAARAEVEMPDEEVDEdfvevyidrGIVPGGYGW 198

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 922025449  239 --PlsneatggsylyhlEGNQVA-VGLIVDLNYKNPHLSP-FDEF-QRFKhhplieqYLKNGKRIS-YGARAITKGGFHS 312
Cdd:TIGR02032 199 vfP--------------KGDGTAnVGVGSRSAEEGEDPKKyLKDFlARRP-------ELKDAETVEvCGALIPIGRPDEK 257

                         330       340       350       360
                  ....*....|....*....|....*....|....*....|.
gi 922025449  313 LPTQQFaggLLIGCDAGTLNGAKIKGTHTAIKSGMLAAEAV 353
Cdd:TIGR02032 258 LVRGNV---LLVGDAAGHVNPLTGEGIYYAMRSGDIAAEVV 295
FAD_binding_2 pfam00890
FAD binding domain; This family includes members that bind FAD. This family includes the ...
 9-198 3.06e-08

FAD binding domain; This family includes members that bind FAD. This family includes the flavoprotein subunits from succinate and fumarate dehydrogenase, aspartate oxidase and the alpha subunit of adenylylsulphate reductase.


Pssm-ID: 395718 [Multi-domain]  Cd Length: 398  Bit Score: 55.76  E-value: 3.06e-08
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 922025449    9 DVLIVGAGPAGLSAAcrikqLAAeKKQDLSVCVVEKGSEVGAHI----------LSGAVFETRSLDELFPDW-------- 70
Cdd:pfam00890   1 DVLVIGGGLAGLAAA-----LAA-AEAGLKVAVVEKGQPFGGATawssggidalGNPPQGGIDSPELHPTDTlkgldela 74

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 922025449   71 -------------------EEKGAPLNTkvNQDKTYYLGnDINGHeLPSWAVPNTLHNKGNYIISLGSLCRWMALQAENL 131
Cdd:pfam00890  75 dhpyveafveaapeavdwlEALGVPFSR--TEDGHLDLR-PLGGL-SATWRTPHDAADRRRGLGTGHALLARLLEGLRKA 150

                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 922025449  132 GVEVYPGFTAsQAIIDEDSRVCGVItgdMGLDKNGEQkgnfepgIELRAKF-TLFAEGARGHIGKQLI 198
Cdd:pfam00890 151 GVDFQPRTAA-DDLIVEDGRVTGAV---VENRRNGRE-------VRIRAIAaVLLATGGFGRLAELLL 207
 
Name Accession Description Interval E-value
ETF_QO pfam05187
Electron transfer flavoprotein-ubiquinone oxidoreductase, 4Fe-4S; Electron-transfer ...
 442-543 1.80e-71

Electron transfer flavoprotein-ubiquinone oxidoreductase, 4Fe-4S; Electron-transfer flavoprotein-ubiquinone oxidoreductase (ETF-QO) in the inner mitochondrial membrane accepts electrons from electron-transfer flavoprotein which is located in the mitochondrial matrix and reduces ubiquinone in the mitochondrial membrane. The two redox centres in the protein, FAD and a [4Fe4S] cluster, are present in a 64-kDa monomer.


Pssm-ID: 461576 [Multi-domain]  Cd Length: 104  Bit Score: 223.26  E-value: 1.80e-71
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 922025449  442 GVLSFDRLSSVYLSNIFHEEDQPCHLRLENQRIPIEQNLELYAEPAQRYCPAGVYEIVQGEQ--QPELQINAANCIHCKT 519
Cdd:pfam05187   1 GVLTFDRLTSVYLSGTNHEEDQPCHLKLKDPEVPIKVNLPKYAGPEQRYCPAGVYEYVEDEEpgGPRLQINAQNCVHCKT 80

                          90       100
                  ....*....|....*....|....
gi 922025449  520 CDIKDPSQNITWTPPEGGGGPNYP 543
Cdd:pfam05187  81 CDIKDPTQNITWVVPEGGGGPNYP 104
FixC COG0644
Dehydrogenase (flavoprotein) [Energy production and conversion];
15-372 2.66e-64

Dehydrogenase (flavoprotein) [Energy production and conversion];


Pssm-ID: 440409 [Multi-domain]  Cd Length: 281  Bit Score: 211.36  E-value: 2.66e-64
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 922025449  15 AGPAGLSAACRikqLAaekKQDLSVCVVEKGSEVGAHILSGAVFeTRSLDELFPDWEEkgAPLNTKVNQDKTYYLGNDin 94
Cdd:COG0644    1 AGPAGSAAARR---LA---RAGLSVLLLEKGSFPGDKICGGGLL-PRALEELEPLGLD--EPLERPVRGARFYSPGGK-- 69

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 922025449  95 GHELPSWavpntlhNKGNYIISLGSLCRWMALQAENLGVEVYPGFTASQAIIDEDsRVCgVITGDmgldkngeqkgnfep 174
Cdd:COG0644   70 SVELPPG-------RGGGYVVDRARFDRWLAEQAEEAGAEVRTGTRVTDVLRDDG-RVV-VRTGD--------------- 125

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 922025449 175 GIELRAKFTLFAEGARGHIGKQLINRfnlAEEKTPQHYAIGFKELWEIPSEQH-QQGLVVHGLGwplSNEATGGSYLYHL 253
Cdd:COG0644  126 GEEIRADYVVDADGARSLLARKLGLK---RRSDEPQDYALAIKEHWELPPLEGvDPGAVEFFFG---EGAPGGYGWVFPL 199

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 922025449 254 EGNQVAVGlivdlnyknphlspfdefqrfkhhplieqylkngkrISYGaraitkggfHSLPTQQFAGGLLIGCDAGTLNG 333
Cdd:COG0644  200 GDGRVSVG------------------------------------IPLG---------GPRPRLVGDGVLLVGDAAGFVDP 234

                        330       340       350       360
                 ....*....|....*....|....*....|....*....|...
gi 922025449 334 AKIKGTHTAIKSGMLAAEAVCEALESQSVTAD----YQKHFKQ 372
Cdd:COG0644  235 LTGEGIHLAMKSGRLAAEAIAEALEGGDFSAEalaeYERRLRE 277
FixX COG2440
Ferredoxin-like protein FixX [Energy production and conversion];
452-545 1.52e-44

Ferredoxin-like protein FixX [Energy production and conversion];


Pssm-ID: 441981 [Multi-domain]  Cd Length: 87  Bit Score: 152.28  E-value: 1.52e-44
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 922025449 452 VYLSNIFHEEDQPcHLRLENQRIPIEQNLelyAEPAQRYCPAGVYEIVQGeqqPELQINAANCIHCKTCDIKDPSQNITW 531
Cdd:COG2440    1 LFLNNYNVDEDQP-HIKVKDPDICIARCL---AKPCTRYCPAGVYEIVGD---GRLQINYENCLECGTCRIKCPTQNITW 73

                         90
                 ....*....|....
gi 922025449 532 TPPEGGGGPNYPNM 545
Cdd:COG2440   74 VYPEGGGGVNYRFG 87
PRK10015 PRK10015
oxidoreductase; Provisional
 7-383 3.71e-33

oxidoreductase; Provisional


Pssm-ID: 182194 [Multi-domain]  Cd Length: 429  Bit Score: 131.25  E-value: 3.71e-33
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 922025449   7 EFDVLIVGAGPAGLSAACRIKqlaaekKQDLSVCVVEKGSEVGAHILSGAVFETRSLDELFPDWEEKgAPLNTKVNQDKT 86
Cdd:PRK10015   5 KFDAIVVGAGVAGSVAALVMA------RAGLDVLVIERGDSAGCKNMTGGRLYAHTLEAIIPGFAAS-APVERKVTREKI 77

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 922025449  87 YYLGND----INGHELPSWAVPntlhnKGNYIISLGSLCRWMALQAENLGVEVYPGFTASqAIIDEDSRVCGVITGDMGL 162
Cdd:PRK10015  78 SFLTEEsavtLDFHREQPDVPQ-----HASYTVLRNRLDPWLMEQAEQAGAQFIPGVRVD-ALVREGNKVTGVQAGDDIL 151

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 922025449 163 DKNgeqkgnfepgielrakFTLFAEGARGHIGKQLinrfNLAEEKTPQHYAIGFKELWEIPSEQHQQ--GLVVH-GLGWP 239
Cdd:PRK10015 152 EAN----------------VVILADGVNSMLGRSL----GMVPASDPHHYAVGVKEVIGLTPEQINDrfNITGEeGAAWL 211

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 922025449 240 L----SNEATGGSYLYhLEGNQVAVGLIVDL-NYKNPHLSPFDEFQRFKHHPLIEQYLKNGKRISYGARAITKGGFHSLP 314
Cdd:PRK10015 212 FagspSDGLMGGGFLY-TNKDSISLGLVCGLgDIAHAQKSVPQMLEDFKQHPAIRPLISGGKLLEYSAHMVPEGGLAMVP 290

                        330       340       350       360       370       380       390
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 922025449 315 TQQFAGGLLIGCDAG-TLN-GAKIKGTHTAIKSGMLAAEAVCEALESQ----SVTADYQKHFKQSWLYEELYQAR 383
Cdd:PRK10015 291 QLVNDGVMIVGDAAGfCLNlGFTVRGMDLAIASAQAAATTVIAAKERAdfsaSSLAQYKRELEQSCVMRDMQHFR 365
PRK10157 PRK10157
putative oxidoreductase FixC; Provisional
 8-381 1.96e-26

putative oxidoreductase FixC; Provisional


Pssm-ID: 182273 [Multi-domain]  Cd Length: 428  Bit Score: 111.93  E-value: 1.96e-26
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 922025449   8 FDVLIVGAGPAGLSAACrikQLAAEKKQdlsVCVVEKGSEVGAHILSGAVFETRSLDELFPDWEEKgAPLNTKVNQDKTY 87
Cdd:PRK10157   6 FDAIIVGAGLAGSVAAL---VLAREGAQ---VLVIERGNSAGAKNVTGGRLYAHSLEHIIPGFADS-APVERLITHEKLA 78

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 922025449  88 YLgNDINGHELPSWAVPNTLHNKGNYIISLGSLCRWMALQAENLGVEVYPGFTASQaIIDEDSRVCGVitgdmgldkngE 167
Cdd:PRK10157  79 FM-TEKSAMTMDYCNGDETSPSQRSYSVLRSKFDAWLMEQAEEAGAQLITGIRVDN-LVQRDGKVVGV-----------E 145

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 922025449 168 QKGNFepgieLRAKFTLFAEGARGHIGKQLinrfNLAEEKTPQHYAIGFKELWEIPSE--------QHQQGLVVHGLGWP 239
Cdd:PRK10157 146 ADGDV-----IEAKTVILADGVNSILAEKL----GMAKRVKPTDVAVGVKELIELPKSviedrfqlQGNQGAACLFAGSP 216

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 922025449 240 lSNEATGGSYLYHLEgNQVAVGLIVDLNY-KNPHLSPFDEFQRFKHHPLIEQYLKNGKRISYGARAITKGGFHSLPtQQF 318
Cdd:PRK10157 217 -TDGLMGGGFLYTNE-NTLSLGLVCGLHHlHDAKKSVPQMLEDFKQHPAVAPLIAGGKLVEYSAHVVPEAGINMLP-ELV 293

                        330       340       350       360       370       380       390
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 922025449 319 AGGLLIGCDAGTLN---GAKIKGTHTAIKSGMLAAEAVCEALESQSVT----ADYQKHFKQSWLYE-ELYQ 381
Cdd:PRK10157 294 GDGVLIAGDAAGMCmnlGFTIRGMDLAIAAGEAAAKTVLSAMKSDDFSkqklAEYRQHLESGPLRDmRMYQ 364
SdhA COG1053
Succinate dehydrogenase/fumarate reductase, flavoprotein subunit [Energy production and ...
 6-188 9.53e-12

Succinate dehydrogenase/fumarate reductase, flavoprotein subunit [Energy production and conversion]; Succinate dehydrogenase/fumarate reductase, flavoprotein subunit is part of the Pathway/BioSystem: TCA cycle


Pssm-ID: 440673 [Multi-domain]  Cd Length: 443  Bit Score: 67.17  E-value: 9.53e-12
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 922025449   6 MEFDVLIVGAGPAGLSAACRikqlAAEkkQDLSVCVVEKGSEVGAH-ILSGAVF---ETR--------SLDELFPDWEEK 73
Cdd:COG1053    2 HEYDVVVVGSGGAGLRAALE----AAE--AGLKVLVLEKVPPRGGHtAAAQGGInaaGTNvqkaagedSPEEHFYDTVKG 75

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 922025449  74 GAPLNtkvNQDKTYYLGNDING--HELPSWAVP------NTLHNKG------NYIISLGS---LCRWMALQAENLGVEVY 136
Cdd:COG1053   76 GDGLA---DQDLVEALAEEAPEaiDWLEAQGVPfsrtpdGRLPQFGghsvgrTCYAGDGTghaLLATLYQAALRLGVEIF 152

                        170       180       190       200       210
                 ....*....|....*....|....*....|....*....|....*....|..
gi 922025449 137 PGFTASQAIIDeDSRVCGVItgdmGLDKNGEQkgnfepgIELRAKFTLFAEG 188
Cdd:COG1053  153 TETEVLDLIVD-DGRVVGVV----ARDRTGEI-------VRIRAKAVVLATG 192
GG-red-SF TIGR02032
geranylgeranyl reductase family; This model represents a subfamily which includes ...
 8-353 1.96e-10

geranylgeranyl reductase family; This model represents a subfamily which includes geranylgeranyl reductases involved in chlorophyll and bacteriochlorophyll biosynthesis as well as other related enzymes which may also act on geranylgeranyl groups or related substrates. [Biosynthesis of cofactors, prosthetic groups, and carriers, Chlorophyll and bacteriochlorphyll]


Pssm-ID: 273936 [Multi-domain]  Cd Length: 295  Bit Score: 61.95  E-value: 1.96e-10
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 922025449    8 FDVLIVGAGPAGLSAACRIkqlaaeKKQDLSVCVVEKGSEVGAHILSGAVfETRSLDELFPDWEekgAPLNTKVnqDKTY 87
Cdd:TIGR02032   1 YDVVVVGAGPAGASAAYRL------ADKGLRVLLLEKKSFPRYKPCGGAL-SPRALEELDLPGE---LIVNLVR--GARF 68

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 922025449   88 YLGNDINgHELPSWAVPntlhnkgNYIISLGSLCRWMALQAENLGVEVYPGFTASQAIIDEDSRVCGVITGdmgldknge 167
Cdd:TIGR02032  69 FSPNGDS-VEIPIETEL-------AYVIDRDAFDEQLAERAQEAGAELRLGTRVLDVEIHDDRVVVIVRGS--------- 131

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 922025449  168 qkgnfepGIELRAKFTLFAEGARGHIGKQLinrfNLAEEKTPqhYAIGFKELWEIPSEQHQQ---------GLVVHGLGW 238
Cdd:TIGR02032 132 -------EGTVTAKIVIGADGSRSIVAKKL----GLKKEPRE--YGVAARAEVEMPDEEVDEdfvevyidrGIVPGGYGW 198

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 922025449  239 --PlsneatggsylyhlEGNQVA-VGLIVDLNYKNPHLSP-FDEF-QRFKhhplieqYLKNGKRIS-YGARAITKGGFHS 312
Cdd:TIGR02032 199 vfP--------------KGDGTAnVGVGSRSAEEGEDPKKyLKDFlARRP-------ELKDAETVEvCGALIPIGRPDEK 257

                         330       340       350       360
                  ....*....|....*....|....*....|....*....|.
gi 922025449  313 LPTQQFaggLLIGCDAGTLNGAKIKGTHTAIKSGMLAAEAV 353
Cdd:TIGR02032 258 LVRGNV---LLVGDAAGHVNPLTGEGIYYAMRSGDIAAEVV 295
UbiH COG0654
2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases [Coenzyme ...
 6-197 3.59e-09

2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases [Coenzyme transport and metabolism, Energy production and conversion]; 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases is part of the Pathway/BioSystem: Ubiquinone biosynthesis


Pssm-ID: 440419 [Multi-domain]  Cd Length: 326  Bit Score: 58.41  E-value: 3.59e-09
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 922025449   6 MEFDVLIVGAGPAGLSAACrikQLAaekKQDLSVCVVEKGSEVG----AHILSGAVFETrsLDEL--FPDWEEKGAPLnt 79
Cdd:COG0654    2 MRTDVLIVGGGPAGLALAL---ALA---RAGIRVTVVERAPPPRpdgrGIALSPRSLEL--LRRLglWDRLLARGAPI-- 71

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 922025449  80 kvnQDKTYYlgNDINGHELPSWAVPNTLHNKGnYIISLGSLCRWMALQAENLGVEVYPGFTAsQAIIDEDSRVCGVitgd 159
Cdd:COG0654   72 ---RGIRVR--DGSDGRVLARFDAAETGLPAG-LVVPRADLERALLEAARALGVELRFGTEV-TGLEQDADGVTVT---- 140

                        170       180       190
                 ....*....|....*....|....*....|....*...
gi 922025449 160 mgldkngeqkgnFEPGIELRAKFTLFAEGARGHIGKQL 197
Cdd:COG0654  141 ------------LADGRTLRADLVVGADGARSAVRRLL 166
FAD_binding_2 pfam00890
FAD binding domain; This family includes members that bind FAD. This family includes the ...
 9-198 3.06e-08

FAD binding domain; This family includes members that bind FAD. This family includes the flavoprotein subunits from succinate and fumarate dehydrogenase, aspartate oxidase and the alpha subunit of adenylylsulphate reductase.


Pssm-ID: 395718 [Multi-domain]  Cd Length: 398  Bit Score: 55.76  E-value: 3.06e-08
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 922025449    9 DVLIVGAGPAGLSAAcrikqLAAeKKQDLSVCVVEKGSEVGAHI----------LSGAVFETRSLDELFPDW-------- 70
Cdd:pfam00890   1 DVLVIGGGLAGLAAA-----LAA-AEAGLKVAVVEKGQPFGGATawssggidalGNPPQGGIDSPELHPTDTlkgldela 74

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 922025449   71 -------------------EEKGAPLNTkvNQDKTYYLGnDINGHeLPSWAVPNTLHNKGNYIISLGSLCRWMALQAENL 131
Cdd:pfam00890  75 dhpyveafveaapeavdwlEALGVPFSR--TEDGHLDLR-PLGGL-SATWRTPHDAADRRRGLGTGHALLARLLEGLRKA 150

                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 922025449  132 GVEVYPGFTAsQAIIDEDSRVCGVItgdMGLDKNGEQkgnfepgIELRAKF-TLFAEGARGHIGKQLI 198
Cdd:pfam00890 151 GVDFQPRTAA-DDLIVEDGRVTGAV---VENRRNGRE-------VRIRAIAaVLLATGGFGRLAELLL 207
CzcO COG2072
Predicted flavoprotein CzcO associated with the cation diffusion facilitator CzcD [Inorganic ...
 7-49 2.91e-07

Predicted flavoprotein CzcO associated with the cation diffusion facilitator CzcD [Inorganic ion transport and metabolism];


Pssm-ID: 441675 [Multi-domain]  Cd Length: 414  Bit Score: 52.94  E-value: 2.91e-07
                         10        20        30        40
                 ....*....|....*....|....*....|....*....|...
gi 922025449   7 EFDVLIVGAGPAGLSAACRIKQlaaekkQDLSVCVVEKGSEVG 49
Cdd:COG2072    6 HVDVVVIGAGQAGLAAAYHLRR------AGIDFVVLEKADDVG 42
COG1233 COG1233
Phytoene dehydrogenase-related protein [Secondary metabolites biosynthesis, transport and ...
 6-49 3.46e-07

Phytoene dehydrogenase-related protein [Secondary metabolites biosynthesis, transport and catabolism];


Pssm-ID: 440846 [Multi-domain]  Cd Length: 491  Bit Score: 52.93  E-value: 3.46e-07
                         10        20        30        40
                 ....*....|....*....|....*....|....*....|....
gi 922025449   6 MEFDVLIVGAGPAGLSAACRikqLAaekKQDLSVCVVEKGSEVG 49
Cdd:COG1233    2 MMYDVVVIGAGIGGLAAAAL---LA---RAGYRVTVLEKNDTPG 39
Thi4 pfam01946
Thi4 family; This family includes Swiss:P32318 a putative thiamine biosynthetic enzyme.
 4-220 4.32e-06

Thi4 family; This family includes Swiss:P32318 a putative thiamine biosynthetic enzyme.


Pssm-ID: 460393  Cd Length: 232  Bit Score: 48.24  E-value: 4.32e-06
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 922025449    4 DCMEFDVLIVGAGPAGLSAACRIKqlaaeKKQDLSVCVVEK------GSEVGAHILSGAVFETRS---LDELFPDWEEKG 74
Cdd:pfam01946  14 DYAESDVVIVGAGSSGLTAAYYLA-----KNRGLKVAIIERsvspggGAWLGGQLFSAMVVRKPAhlfLDEFGIPYEDEG 88

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 922025449   75 aplntkvnqdkTYYLGNDinghelpSWAVPNTLHNKgnyiislgslcrwmALQAENlgVEVYPGFTASQAIIDEDSRVCG 154
Cdd:pfam01946  89 -----------DYVVVKH-------AALFTSTLMSK--------------ALQLPN--VKLFNATSVEDLIVRPGVGVAG 134

                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 922025449  155 VITGDMGLDKNGEqkgNFEPGIeLRAKFTLFAEGARGHIGKQLINRFNLAeekTPQHYAIGFKELW 220
Cdd:pfam01946 135 VVTNWTLVEQAGL---HMDPNT-IRAKVVVSATGHDGPFGAFCVKRIKLI---QQIQKVPGMKSLD 193
DAO pfam01266
FAD dependent oxidoreductase; This family includes various FAD dependent oxidoreductases: ...
 9-157 5.88e-06

FAD dependent oxidoreductase; This family includes various FAD dependent oxidoreductases: Glycerol-3-phosphate dehydrogenase EC:1.1.99.5, Sarcosine oxidase beta subunit EC:1.5.3.1, D-alanine oxidase EC:1.4.99.1, D-aspartate oxidase EC:1.4.3.1.


Pssm-ID: 426168 [Multi-domain]  Cd Length: 339  Bit Score: 48.55  E-value: 5.88e-06
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 922025449    9 DVLIVGAGPAGLSAACrikQLAaekKQDLSVCVVEKGSEVGAH-------ILSGAVFETRSLD---------ELFPDWEE 72
Cdd:pfam01266   1 DVVVIGGGIVGLSTAY---ELA---RRGLSVTLLERGDDPGSGasgrnagLIHPGLRYLEPSElarlalealDLWEELEE 74

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 922025449   73 KGAPlNTKVNQDKTYYLGNDINGHELPSWA---------------------VPNT------LHNKGNYIISLGSLCRWMA 125
Cdd:pfam01266  75 ELGI-DCGFRRCGVLVLARDEEEEALEKLLaalrrlgvpaelldaeelrelEPLLpglrggLFYPDGGHVDPARLLRALA 153

                         170       180       190
                  ....*....|....*....|....*....|..
gi 922025449  126 LQAENLGVEVYPGFTASQaiIDEDSRVCGVIT 157
Cdd:pfam01266 154 RAAEALGVRIIEGTEVTG--IEEEGGVWGVVT 183
NAD_binding_8 pfam13450
NAD(P)-binding Rossmann-like domain;
12-57 1.13e-05

NAD(P)-binding Rossmann-like domain;


Pssm-ID: 433218 [Multi-domain]  Cd Length: 67  Bit Score: 43.29  E-value: 1.13e-05
                          10        20        30        40
                  ....*....|....*....|....*....|....*....|....*.
gi 922025449   12 IVGAGPAGLSAACRIkqlaaeKKQDLSVCVVEKGSEVGAHILSGAV 57
Cdd:pfam13450   1 IVGAGLAGLVAAALL------AKRGFRVLVLEKRDRLGGNAYSYRV 40
LhgO COG0579
L-2-hydroxyglutarate oxidase LhgO [Carbohydrate transport and metabolism];
6-51 1.23e-05

L-2-hydroxyglutarate oxidase LhgO [Carbohydrate transport and metabolism];


Pssm-ID: 440344 [Multi-domain]  Cd Length: 418  Bit Score: 47.83  E-value: 1.23e-05
                         10        20        30        40
                 ....*....|....*....|....*....|....*....|....*.
gi 922025449   6 MEFDVLIVGAGPAGLSAACRIKQLaaekkQDLSVCVVEKGSEVGAH 51
Cdd:COG0579    3 EMYDVVIIGAGIVGLALARELSRY-----EDLKVLVLEKEDDVAQE 43
FAD_binding_3 pfam01494
FAD binding domain; This domain is involved in FAD binding in a number of enzymes.
 7-197 1.41e-05

FAD binding domain; This domain is involved in FAD binding in a number of enzymes.


Pssm-ID: 396193 [Multi-domain]  Cd Length: 348  Bit Score: 47.32  E-value: 1.41e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 922025449    7 EFDVLIVGAGPAGLSAAcrikQLAAEkkQDLSVCVVEKGSEvgAHILS-GAVFETRSLdELFPD---WE---EKGAPLN- 78
Cdd:pfam01494   1 ETDVLIVGGGPAGLMLA----LLLAR--AGVRVVLVERHAT--TSVLPrAHGLNQRTM-ELLRQaglEDrilAEGVPHEg 71

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 922025449   79 ---TKVNQDKTYYLGNDiNGHELPSWaVPNTLhnkgnyiislgsLCRWMALQAENLGVEVYPGfTASQAIIDEDSRVCGV 155
Cdd:pfam01494  72 mglAFYNTRRRADLDFL-TSPPRVTV-YPQTE------------LEPILVEHAEARGAQVRFG-TEVLSLEQDGDGVTAV 136

                         170       180       190       200
                  ....*....|....*....|....*....|....*....|..
gi 922025449  156 ITGdmglDKNGEQKgnfepgiELRAKFTLFAEGARGHIGKQL 197
Cdd:pfam01494 137 VRD----RRDGEEY-------TVRAKYLVGCDGGRSPVRKTL 167
DadA COG0665
Glycine/D-amino acid oxidase (deaminating) [Amino acid transport and metabolism];
6-159 2.00e-05

Glycine/D-amino acid oxidase (deaminating) [Amino acid transport and metabolism];


Pssm-ID: 440429 [Multi-domain]  Cd Length: 364  Bit Score: 46.82  E-value: 2.00e-05
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 922025449   6 MEFDVLIVGAGPAGLSAAcriKQLAaekKQDLSVCVVEKGsEVGAH-------ILSGAVFETRSLD---------ELFPD 69
Cdd:COG0665    1 ATADVVVIGGGIAGLSTA---YHLA---RRGLDVTVLERG-RPGSGasgrnagQLRPGLAALADRAlvrlarealDLWRE 73

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 922025449  70 WEEKgAPLNTKVNQDKTYYLGND-----------------------INGHEL----PSWAVPNT---LHNKGNYIISLGS 119
Cdd:COG0665   74 LAAE-LGIDCDFRRTGVLYLARTeaelaalraeaealralglpvelLDAAELrerePGLGSPDYaggLYDPDDGHVDPAK 152

                        170       180       190       200
                 ....*....|....*....|....*....|....*....|
gi 922025449 120 LCRWMALQAENLGVEVYPGfTASQAIIDEDSRVCGVITGD 159
Cdd:COG0665  153 LVRALARAARAAGVRIREG-TPVTGLEREGGRVTGVRTER 191
TrxB COG0492
Thioredoxin reductase [Posttranslational modification, protein turnover, chaperones];
8-49 3.10e-05

Thioredoxin reductase [Posttranslational modification, protein turnover, chaperones];


Pssm-ID: 440258 [Multi-domain]  Cd Length: 305  Bit Score: 45.88  E-value: 3.10e-05
                         10        20        30        40
                 ....*....|....*....|....*....|....*....|..
gi 922025449   8 FDVLIVGAGPAGLSAAcrikqLAAeKKQDLSVCVVEKGsEVG 49
Cdd:COG0492    1 YDVVIIGAGPAGLTAA-----IYA-ARAGLKTLVIEGG-EPG 35
Lpd COG1249
Dihydrolipoamide dehydrogenase (E3) component of pyruvate/2-oxoglutarate dehydrogenase complex ...
 6-45 4.42e-05

Dihydrolipoamide dehydrogenase (E3) component of pyruvate/2-oxoglutarate dehydrogenase complex or glutathione oxidoreductase [Energy production and conversion]; Dihydrolipoamide dehydrogenase (E3) component of pyruvate/2-oxoglutarate dehydrogenase complex or glutathione oxidoreductase is part of the Pathway/BioSystem: Glycine cleavagePyruvate oxidation


Pssm-ID: 440861 [Multi-domain]  Cd Length: 456  Bit Score: 45.85  E-value: 4.42e-05
                         10        20        30        40
                 ....*....|....*....|....*....|....*....|
gi 922025449   6 MEFDVLIVGAGPAGLSAACRIKQLaaekkqDLSVCVVEKG 45
Cdd:COG1249    2 KDYDLVVIGAGPGGYVAAIRAAQL------GLKVALVEKG 35
COG3380 COG3380
Predicted NAD/FAD-dependent oxidoreductase [General function prediction only];
6-49 4.56e-05

Predicted NAD/FAD-dependent oxidoreductase [General function prediction only];


Pssm-ID: 442607 [Multi-domain]  Cd Length: 331  Bit Score: 45.64  E-value: 4.56e-05
                         10        20        30        40
                 ....*....|....*....|....*....|....*....|....
gi 922025449   6 MEFDVLIVGAGPAGLSAAcriKQLAAekkQDLSVCVVEKGSEVG 49
Cdd:COG3380    2 SMPDIAIIGAGIAGLAAA---RALQD---AGHEVTVFEKSRGVG 39
HemY COG1232
Protoporphyrinogen oxidase HemY/PPOX [Coenzyme transport and metabolism]; Protoporphyrinogen ...
 9-49 5.10e-05

Protoporphyrinogen oxidase HemY/PPOX [Coenzyme transport and metabolism]; Protoporphyrinogen oxidase HemY/PPOX is part of the Pathway/BioSystem: Heme biosynthesis


Pssm-ID: 440845 [Multi-domain]  Cd Length: 443  Bit Score: 45.98  E-value: 5.10e-05
                         10        20        30        40
                 ....*....|....*....|....*....|....*....|.
gi 922025449   9 DVLIVGAGPAGLSAACRIkqlaaeKKQDLSVCVVEKGSEVG 49
Cdd:COG1232    3 RVAVIGGGIAGLTAAYRL------AKAGHEVTVLEASDRVG 37
COG2509 COG2509
FAD-dependent dehydrogenase [General function prediction only];
6-48 8.58e-05

FAD-dependent dehydrogenase [General function prediction only];


Pssm-ID: 441999 [Multi-domain]  Cd Length: 466  Bit Score: 45.10  E-value: 8.58e-05
                         10        20        30        40
                 ....*....|....*....|....*....|....*....|...
gi 922025449   6 MEFDVLIVGAGPAGLSAACRikqLAaekKQDLSVCVVEKGSEV 48
Cdd:COG2509   29 LKYDVVIVGAGPAGLFAALE---LA---EAGLKPLVLERGKDV 65
PRK06292 PRK06292
dihydrolipoamide dehydrogenase; Validated
 6-45 1.03e-04

dihydrolipoamide dehydrogenase; Validated


Pssm-ID: 235774 [Multi-domain]  Cd Length: 460  Bit Score: 44.78  E-value: 1.03e-04
                         10        20        30        40
                 ....*....|....*....|....*....|....*....|
gi 922025449   6 MEFDVLIVGAGPAGLSAACRIKQLAaekkqdLSVCVVEKG 45
Cdd:PRK06292   2 EKYDVIVIGAGPAGYVAARRAAKLG------KKVALIEKG 35
PRK09126 PRK09126
FAD-dependent hydroxylase;
6-47 1.30e-04

FAD-dependent hydroxylase;


Pssm-ID: 236385 [Multi-domain]  Cd Length: 392  Bit Score: 44.55  E-value: 1.30e-04
                         10        20        30        40
                 ....*....|....*....|....*....|....*....|..
gi 922025449   6 MEFDVLIVGAGPAGLSAAcrikqlAAEKKQDLSVCVVEKGSE 47
Cdd:PRK09126   2 MHSDIVVVGAGPAGLSFA------RSLAGSGLKVTLIERQPL 37
YdhS COG4529
Uncharacterized NAD(P)/FAD-binding protein YdhS [General function prediction only];
1-62 1.59e-04

Uncharacterized NAD(P)/FAD-binding protein YdhS [General function prediction only];


Pssm-ID: 443597 [Multi-domain]  Cd Length: 466  Bit Score: 44.17  E-value: 1.59e-04
                         10        20        30        40        50        60
                 ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 922025449   1 MERDCMefDVLIVGAGPAGLSAAcriKQLAAEKKQDLSVCVVEKGSEVGAhilsGAVFETRS 62
Cdd:COG4529    1 MTGARK--RIAIIGGGASGTALA---IHLLRRAPEPLRITLFEPRPELGR----GVAYSTDS 53
PRK05329 PRK05329
glycerol-3-phosphate dehydrogenase subunit GlpB;
6-57 1.68e-04

glycerol-3-phosphate dehydrogenase subunit GlpB;


Pssm-ID: 235412  Cd Length: 422  Bit Score: 44.07  E-value: 1.68e-04
                         10        20        30        40        50
                 ....*....|....*....|....*....|....*....|....*....|...
gi 922025449   6 MEFDVLIVGAGPAGLSAACRikqlAAEkkQDLSVCVVEKGSevGA-HILSGAV 57
Cdd:PRK05329   1 MKFDVLVIGGGLAGLTAALA----AAE--AGKRVALVAKGQ--GAlHFSSGSI 45
PRK06854 PRK06854
adenylyl-sulfate reductase subunit alpha;
6-57 1.84e-04

adenylyl-sulfate reductase subunit alpha;


Pssm-ID: 235879 [Multi-domain]  Cd Length: 608  Bit Score: 44.14  E-value: 1.84e-04
                         10        20        30        40        50
                 ....*....|....*....|....*....|....*....|....*....|...
gi 922025449   6 MEFDVLIVGAGPAGLSAACRIKQLAaekkQDLSVCVVEKgsevgAHIL-SGAV 57
Cdd:PRK06854  10 VDTDILIIGGGMAGCGAAFEAKEWA----PDLKVLIVEK-----ANIKrSGAV 53
PRK05249 PRK05249
Si-specific NAD(P)(+) transhydrogenase;
6-49 2.06e-04

Si-specific NAD(P)(+) transhydrogenase;


Pssm-ID: 235373 [Multi-domain]  Cd Length: 461  Bit Score: 43.99  E-value: 2.06e-04
                         10        20        30        40
                 ....*....|....*....|....*....|....*....|....
gi 922025449   6 MEFDVLIVGAGPAGLSAACrikQLAaekKQDLSVCVVEKGSEVG 49
Cdd:PRK05249   4 YDYDLVVIGSGPAGEGAAM---QAA---KLGKRVAVIERYRNVG 41
PRK07208 PRK07208
hypothetical protein; Provisional
 9-49 3.04e-04

hypothetical protein; Provisional


Pssm-ID: 235967 [Multi-domain]  Cd Length: 479  Bit Score: 43.34  E-value: 3.04e-04
                         10        20        30        40
                 ....*....|....*....|....*....|....*....|.
gi 922025449   9 DVLIVGAGPAGLSAACrikQLAaekKQDLSVCVVEKGSEVG 49
Cdd:PRK07208   6 SVVIIGAGPAGLTAAY---ELL---KRGYPVTVLEADPVVG 40
HI0933_like pfam03486
HI0933-like protein;
8-55 3.50e-04

HI0933-like protein;


Pssm-ID: 427330 [Multi-domain]  Cd Length: 406  Bit Score: 42.95  E-value: 3.50e-04
                          10        20        30        40
                  ....*....|....*....|....*....|....*....|....*....
gi 922025449    8 FDVLIVGAGPAGLSAAcrikqlAAEKKQDLSVCVVEKGSEVGAHIL-SG 55
Cdd:pfam03486   1 FDVIVIGGGAAGLMAA------ISAAKRGRRVLLIEKGKKLGRKILiSG 43
HdrA COG1148
Heterodisulfide reductase, subunit A (polyferredoxin) [Energy production and conversion];
6-83 4.67e-04

Heterodisulfide reductase, subunit A (polyferredoxin) [Energy production and conversion];


Pssm-ID: 440762 [Multi-domain]  Cd Length: 563  Bit Score: 42.92  E-value: 4.67e-04
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 922025449   6 MEFDVLIVGAGPAGLSAAcriKQLAaekKQDLSVCVVEKGSEVGAHilsgavfeTRSLDELFPDWEEKGAPLNTKVNQ 83
Cdd:COG1148  139 VNKRALVIGGGIAGMTAA---LELA---EQGYEVYLVEKEPELGGR--------AAQLHKTFPGLDCPQCILEPLIAE 202
PRK06416 PRK06416
dihydrolipoamide dehydrogenase; Reviewed
 6-45 4.82e-04

dihydrolipoamide dehydrogenase; Reviewed


Pssm-ID: 235798 [Multi-domain]  Cd Length: 462  Bit Score: 42.83  E-value: 4.82e-04
                         10        20        30        40
                 ....*....|....*....|....*....|....*....|
gi 922025449   6 MEFDVLIVGAGPAGLSAACRikqlAAEKKQdlSVCVVEKG 45
Cdd:PRK06416   3 FEYDVIVIGAGPGGYVAAIR----AAQLGL--KVAIVEKE 36
GlpB COG3075
Anaerobic glycerol-3-phosphate dehydrogenase [Amino acid transport and metabolism];
6-57 5.01e-04

Anaerobic glycerol-3-phosphate dehydrogenase [Amino acid transport and metabolism];


Pssm-ID: 442309  Cd Length: 415  Bit Score: 42.47  E-value: 5.01e-04
                         10        20        30        40        50
                 ....*....|....*....|....*....|....*....|....*....|...
gi 922025449   6 MEFDVLIVGAGPAGLSAACRikqlAAEkkQDLSVCVVEKGSevGA-HILSGAV 57
Cdd:COG3075    1 MKFDVVVIGGGLAGLTAAIR----AAE--AGLRVAIVSAGQ--SAlHFSSGSL 45
PLN02976 PLN02976
amine oxidase
 2-62 6.59e-04

amine oxidase


Pssm-ID: 215527 [Multi-domain]  Cd Length: 1713  Bit Score: 42.93  E-value: 6.59e-04
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 922025449    2 ERDCMEFD------VLIVGAGPAGLSAAcriKQLaaeKKQDLSVCVVEKGSEVGahilsGAVFETRS 62
Cdd:PLN02976  682 GNHCVLCDsvdrkkIIVVGAGPAGLTAA---RHL---QRQGFSVTVLEARSRIG-----GRVYTDRS 737
FAD_oxidored pfam12831
FAD dependent oxidoreductase; This family of proteins contains FAD dependent oxidoreductases ...
 9-49 6.98e-04

FAD dependent oxidoreductase; This family of proteins contains FAD dependent oxidoreductases and related proteins.


Pssm-ID: 432816 [Multi-domain]  Cd Length: 420  Bit Score: 42.21  E-value: 6.98e-04
                          10        20        30        40
                  ....*....|....*....|....*....|....*....|.
gi 922025449    9 DVLIVGAGPAGLSAAcrikqLAAeKKQDLSVCVVEKGSEVG 49
Cdd:pfam12831   1 DVVVVGGGPAGVAAA-----IAA-ARAGAKVLLVERRGFLG 35
PLN02568 PLN02568
polyamine oxidase
 10-54 7.36e-04

polyamine oxidase


Pssm-ID: 215308 [Multi-domain]  Cd Length: 539  Bit Score: 42.12  E-value: 7.36e-04
                         10        20        30        40
                 ....*....|....*....|....*....|....*....|....*
gi 922025449  10 VLIVGAGPAGLSAACRIKQlAAEKKQDLSVCVVEKGSEVGAHILS 54
Cdd:PLN02568   8 IVIIGAGMAGLTAANKLYT-SSAANDMFELTVVEGGDRIGGRINT 51
Lycopene_cycl pfam05834
Lycopene cyclase protein; This family consists of lycopene beta and epsilon cyclase proteins. ...
 9-45 9.86e-04

Lycopene cyclase protein; This family consists of lycopene beta and epsilon cyclase proteins. Carotenoids with cyclic end groups are essential components of the photosynthetic membranes in all plants, algae, and cyanobacteria. These lipid-soluble compounds protect against photo-oxidation, harvest light for photosynthesis, and dissipate excess light energy absorbed by the antenna pigments. The cyclization of lycopene (psi, psi-carotene) is a key branch point in the pathway of carotenoid biosynthesis. Two types of cyclic end groups are found in higher plant carotenoids: the beta and epsilon rings. Carotenoids with two beta rings are ubiquitous, and those with one beta and one epsilon ring are common; however, carotenoids with two epsilon rings are rare.


Pssm-ID: 310433 [Multi-domain]  Cd Length: 380  Bit Score: 41.63  E-value: 9.86e-04
                          10        20        30
                  ....*....|....*....|....*....|....*..
gi 922025449    9 DVLIVGAGPAGLSAACRIkqlaAEKKQDLSVCVVEKG 45
Cdd:pfam05834   1 DVVIIGAGPAGLSLAARL----AAAKPGLSVVLIEPG 33
BetA COG2303
Choline dehydrogenase or related flavoprotein [Lipid transport and metabolism, General ...
 6-45 9.89e-04

Choline dehydrogenase or related flavoprotein [Lipid transport and metabolism, General function prediction only]; Choline dehydrogenase or related flavoprotein is part of the Pathway/BioSystem: Non-phosphorylated Entner-Doudoroff pathway


Pssm-ID: 441878 [Multi-domain]  Cd Length: 531  Bit Score: 41.74  E-value: 9.89e-04
                         10        20        30        40
                 ....*....|....*....|....*....|....*....|
gi 922025449   6 MEFDVLIVGAGPAGLSAACRikqLAAEkkQDLSVCVVEKG 45
Cdd:COG2303    3 EEYDYVIVGAGSAGCVLANR---LSED--AGLRVLLLEAG 37
YobN COG1231
Monoamine oxidase [Amino acid transport and metabolism];
1-59 1.07e-03

Monoamine oxidase [Amino acid transport and metabolism];


Pssm-ID: 440844 [Multi-domain]  Cd Length: 440  Bit Score: 41.45  E-value: 1.07e-03
                         10        20        30        40        50        60
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 922025449   1 MERDCMEFDVLIVGAGPAGLSAAcriKQLaaeKKQDLSVCVVEKGSEVGAHILS------GAVFE 59
Cdd:COG1231    1 MSRRARGKDVVIVGAGLAGLAAA---REL---RKAGLDVTVLEARDRVGGRVWTlrfgddGLYAE 59
PRK06134 PRK06134
putative FAD-binding dehydrogenase; Reviewed
 2-49 1.12e-03

putative FAD-binding dehydrogenase; Reviewed


Pssm-ID: 180419 [Multi-domain]  Cd Length: 581  Bit Score: 41.63  E-value: 1.12e-03
                         10        20        30        40
                 ....*....|....*....|....*....|....*....|....*...
gi 922025449   2 ERDCmefDVLIVGAGPAGLSAACrikqLAAekKQDLSVCVVEKGSEVG 49
Cdd:PRK06134  10 DLEC---DVLVIGSGAAGLSAAV----TAA--WHGLKVIVVEKDPVFG 48
YhiN COG2081
Predicted flavoprotein YhiN [General function prediction only];
11-55 1.25e-03

Predicted flavoprotein YhiN [General function prediction only];


Pssm-ID: 441684 [Multi-domain]  Cd Length: 402  Bit Score: 41.19  E-value: 1.25e-03
                         10        20        30        40
                 ....*....|....*....|....*....|....*....|....*.
gi 922025449  11 LIVGAGPAGLSAACRikqlAAEKKqdLSVCVVEKGSEVGAHIL-SG 55
Cdd:COG2081    1 IVIGAGAAGLMAAIT----AAERG--ARVLLLEKNPKVGRKILiSG 40
NuoI COG1143
Formate hydrogenlyase subunit 6/NADH:ubiquinone oxidoreductase 23 kD subunit (chain I) [Energy ...
 489-520 1.31e-03

Formate hydrogenlyase subunit 6/NADH:ubiquinone oxidoreductase 23 kD subunit (chain I) [Energy production and conversion]; Formate hydrogenlyase subunit 6/NADH:ubiquinone oxidoreductase 23 kD subunit (chain I) is part of the Pathway/BioSystem: NADH dehydrogenase


Pssm-ID: 440758 [Multi-domain]  Cd Length: 66  Bit Score: 37.42  E-value: 1.31e-03
                         10        20        30
                 ....*....|....*....|....*....|..
gi 922025449 489 RYCPAGVYEIVQGEQQPELQINAANCIHCKTC 520
Cdd:COG1143   12 RVCPVDAITIEDGEPGKVYVIDPDKCIGCGLC 43
PRK08294 PRK08294
phenol 2-monooxygenase; Provisional
 7-44 1.53e-03

phenol 2-monooxygenase; Provisional


Pssm-ID: 236223 [Multi-domain]  Cd Length: 634  Bit Score: 41.13  E-value: 1.53e-03
                         10        20        30
                 ....*....|....*....|....*....|....*...
gi 922025449   7 EFDVLIVGAGPAGLSAACrikQLAAEKkqDLSVCVVEK 44
Cdd:PRK08294  32 EVDVLIVGCGPAGLTLAA---QLSAFP--DITTRIVER 64
NadB COG0029
Aspartate oxidase [Coenzyme transport and metabolism]; Aspartate oxidase is part of the ...
 6-46 1.64e-03

Aspartate oxidase [Coenzyme transport and metabolism]; Aspartate oxidase is part of the Pathway/BioSystem: NAD biosynthesis


Pssm-ID: 439800 [Multi-domain]  Cd Length: 521  Bit Score: 41.25  E-value: 1.64e-03
                         10        20        30        40
                 ....*....|....*....|....*....|....*....|.
gi 922025449   6 MEFDVLIVGAGPAGLSAAcrikqLAAekKQDLSVCVVEKGS 46
Cdd:COG0029    3 LKTDVLVIGSGIAGLSAA-----LKL--AERGRVTLLTKGE 36
PRK07843 PRK07843
3-oxosteroid 1-dehydrogenase;
7-49 1.82e-03

3-oxosteroid 1-dehydrogenase;


Pssm-ID: 236111 [Multi-domain]  Cd Length: 557  Bit Score: 41.17  E-value: 1.82e-03
                         10        20        30        40
                 ....*....|....*....|....*....|....*....|...
gi 922025449   7 EFDVLIVGAGPAGLSAAcrikqLAAeKKQDLSVCVVEKGSEVG 49
Cdd:PRK07843   7 EYDVVVVGSGAAGMVAA-----LTA-AHRGLSTVVVEKAPHYG 43
Pyr_redox_2 pfam07992
Pyridine nucleotide-disulphide oxidoreductase; This family includes both class I and class II ...
 8-90 2.99e-03

Pyridine nucleotide-disulphide oxidoreductase; This family includes both class I and class II oxidoreductases and also NADH oxidases and peroxidases. This domain is actually a small NADH binding domain within a larger FAD binding domain.


Pssm-ID: 400379 [Multi-domain]  Cd Length: 301  Bit Score: 39.99  E-value: 2.99e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 922025449    8 FDVLIVGAGPAGLSAACRIKQLAAEkkqdlsVCVVEKGSE------VGAHILSGAVfETRSLDELFPDWEEKGAPLNTKV 81
Cdd:pfam07992   1 YDVVVIGGGPAGLAAALTLAQLGGK------VTLIEDEGTcpyggcVLSKALLGAA-EAPEIASLWADLYKRKEEVVKKL 73


                  ....*....
gi 922025449   82 NQDKTYYLG 90
Cdd:pfam07992  74 NNGIEVLLG 82
PRK09077 PRK09077
L-aspartate oxidase; Provisional
 6-46 4.10e-03

L-aspartate oxidase; Provisional


Pssm-ID: 236374 [Multi-domain]  Cd Length: 536  Bit Score: 39.90  E-value: 4.10e-03
                         10        20        30        40
                 ....*....|....*....|....*....|....*....|.
gi 922025449   6 MEFDVLIVGAGPAGLSAACRikqLAaekkQDLSVCVVEKGS 46
Cdd:PRK09077   7 HQCDVLIIGSGAAGLSLALR---LA----EHRRVAVLSKGP 40
PRK12842 PRK12842
putative succinate dehydrogenase; Reviewed
 6-57 5.62e-03

putative succinate dehydrogenase; Reviewed


Pssm-ID: 237224 [Multi-domain]  Cd Length: 574  Bit Score: 39.29  E-value: 5.62e-03
                         10        20        30        40        50
                 ....*....|....*....|....*....|....*....|....*....|....
gi 922025449   6 MEFDVLIVGAGPAGLSAAcrikqLAAeKKQDLSVCVVEKgSEV--GAHILSGAV 57
Cdd:PRK12842   8 LTCDVLVIGSGAGGLSAA-----ITA-RKLGLDVVVLEK-EPVfgGTTAFSGGV 54
PRK15317 PRK15317
alkyl hydroperoxide reductase subunit F; Provisional
 8-23 9.21e-03

alkyl hydroperoxide reductase subunit F; Provisional


Pssm-ID: 237942 [Multi-domain]  Cd Length: 517  Bit Score: 38.60  E-value: 9.21e-03
                         10
                 ....*....|....*.
gi 922025449   8 FDVLIVGAGPAGLSAA 23
Cdd:PRK15317 212 YDVLVVGGGPAGAAAA 227
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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