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Conserved domains on  [gi|928931667|ref|WP_053956506|]
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nitroreductase family protein [Inediibacterium massiliense]

Protein Classification

Graphical summary

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List of domain hits

Name Accession Description Interval E-value
nitroreductase cd20610
nitroreductase family protein; Proteins of this family catalyze the reduction of flavin or ...
7-190 1.17e-79

nitroreductase family protein; Proteins of this family catalyze the reduction of flavin or nitrocompounds using NAD(P)H as electron donor in a obligatory two-electron transfer, utilizing FMN or FAD as cofactor. They are often found to be homodimers. Enzymes of this family are described as NAD(P)H:FMN oxidoreductases, oxygen-insensitive nitroreductase, flavin reductase P, dihydropteridine reductase, NADH oxidase or NADH dehydrogenase.


:

Pssm-ID: 380331 [Multi-domain]  Cd Length: 167  Bit Score: 235.25  E-value: 1.17e-79
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 928931667   7 IYKRHSVRKFKDVSVPIEDIHKIIEAATFAPSGKNIQNWRFVVISNKEKIKQIANIIENKNADLATHLEN--EEEKVKFT 84
Cdd:cd20610    1 IKKRRSIRKFKPDPVPKEDIEKILEAANWAPSGMNRQNWEFVVVKGGEKIEKIGISIKKKNEEIARLLEKvfAEKPIRFR 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 928931667  85 KFVKYATFFTKAPVLILVYAGPYEatgldvlkkikaptdeihDLLKRSPLIQSVGAAMENIMLSATHLGYGTCWMTSQNY 164
Cdd:cd20610   81 KFRRFFTLFGGAPVLVVVYTEPYK------------------PPEERKPDLQSVSAAIQNLLLAAHALGLGTCWMTGPLY 142
                        170       180
                 ....*....|....*....|....*.
gi 928931667 165 AAKEIEDFVGFkEEGYFLAAMTPLGV 190
Cdd:cd20610  143 AEDEIEEILEI-PDDKELVAVTPLGY 167
 
Name Accession Description Interval E-value
nitroreductase cd20610
nitroreductase family protein; Proteins of this family catalyze the reduction of flavin or ...
7-190 1.17e-79

nitroreductase family protein; Proteins of this family catalyze the reduction of flavin or nitrocompounds using NAD(P)H as electron donor in a obligatory two-electron transfer, utilizing FMN or FAD as cofactor. They are often found to be homodimers. Enzymes of this family are described as NAD(P)H:FMN oxidoreductases, oxygen-insensitive nitroreductase, flavin reductase P, dihydropteridine reductase, NADH oxidase or NADH dehydrogenase.


Pssm-ID: 380331 [Multi-domain]  Cd Length: 167  Bit Score: 235.25  E-value: 1.17e-79
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 928931667   7 IYKRHSVRKFKDVSVPIEDIHKIIEAATFAPSGKNIQNWRFVVISNKEKIKQIANIIENKNADLATHLEN--EEEKVKFT 84
Cdd:cd20610    1 IKKRRSIRKFKPDPVPKEDIEKILEAANWAPSGMNRQNWEFVVVKGGEKIEKIGISIKKKNEEIARLLEKvfAEKPIRFR 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 928931667  85 KFVKYATFFTKAPVLILVYAGPYEatgldvlkkikaptdeihDLLKRSPLIQSVGAAMENIMLSATHLGYGTCWMTSQNY 164
Cdd:cd20610   81 KFRRFFTLFGGAPVLVVVYTEPYK------------------PPEERKPDLQSVSAAIQNLLLAAHALGLGTCWMTGPLY 142
                        170       180
                 ....*....|....*....|....*.
gi 928931667 165 AAKEIEDFVGFkEEGYFLAAMTPLGV 190
Cdd:cd20610  143 AEDEIEEILEI-PDDKELVAVTPLGY 167
NfnB COG0778
Nitroreductase [Energy production and conversion]; Nitroreductase is part of the Pathway ...
4-206 5.03e-47

Nitroreductase [Energy production and conversion]; Nitroreductase is part of the Pathway/BioSystem: Pyrimidine degradation


Pssm-ID: 440541 [Multi-domain]  Cd Length: 163  Bit Score: 152.31  E-value: 5.03e-47
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 928931667   4 LDFIYKRHSVRKFKDVSVPIEDIHKIIEAATFAPSGKNIQNWRFVVISNKEKIKQIANIIENKNADlathleneeekvkf 83
Cdd:COG0778    2 LELLLTRRSVRKFTDKPVSDEELEELLEAARLAPSAGNLQPWRFVVVRDPELRERLAEALAEANQE-------------- 67
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 928931667  84 tkfvkyatFFTKAPVLILVYAGPYEATgldvlkkiKAPTDEIHdllkrspliQSVGAAMENIMLSATHLGYGTCWMTSqn 163
Cdd:COG0778   68 --------WVADAPVLIVVCADPDRSE--------KVPERYAL---------LDAGIAAQNLLLAARALGLGTCWIGG-- 120
                        170       180       190       200
                 ....*....|....*....|....*....|....*....|...
gi 928931667 164 YAAKEIEDFVGFkEEGYFLAAMTPLGVPDGEPKSPSRKPIQEV 206
Cdd:COG0778  121 FDPEKVRELLGL-PEGEEPVALLALGYPAEELNPRPRKPLEEV 162
Nitroreductase pfam00881
Nitroreductase family; The nitroreductase family comprises a group of FMN- or FAD-dependent ...
7-189 8.97e-39

Nitroreductase family; The nitroreductase family comprises a group of FMN- or FAD-dependent and NAD(P)H-dependent enzymes able to metabolize nitrosubstituted compounds.


Pssm-ID: 425926 [Multi-domain]  Cd Length: 168  Bit Score: 131.36  E-value: 8.97e-39
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 928931667    7 IYKRHSVRKFKDVSVPIEDIHKIIEAATFAPSGKNIQNWRFVVISNKEKIKQIANIIENKNADLATHLENEEEKVKFTKF 86
Cdd:pfam00881   1 IRQRRSVRKFDPEPVPKEVLEEILEAARRAPSAGNLQPWRFYVVTDGELRYRLAEAALELLLVEPAAALLLLLRRDANLK 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 928931667   87 VKYATFFTKAPVLILVyagpyeaTGLDVLKKIKAPTDEIHDLLKrspliqSVGAAMENIMLSATHLGYGTCWMTSQNYAA 166
Cdd:pfam00881  81 LLLQDFLRGAPVLIVI-------TASLSTYLRKAAERAYREALL------DAGAAAQNLLLAATSLGLGSCPIGGFDAAA 147
                         170       180
                  ....*....|....*....|...
gi 928931667  167 keIEDFVGFkEEGYFLAAMTPLG 189
Cdd:pfam00881 148 --VRELLGL-PDDERLVGLIAVG 167
BluB TIGR02476
5,6-dimethylbenzimidazole synthase; A previously published hypothesis that BluB, involved in ...
4-198 1.41e-07

5,6-dimethylbenzimidazole synthase; A previously published hypothesis that BluB, involved in cobalamin biosynthesis, is EC 1.16.8.1 (cob(II)yrinic acid a,c-diamide reductase) is now contradicted by newer work ascribing a role in 5,6-dimethylbenzimidazole (DMB) biosynthesis. The BluB protein is related to the nitroreductase family (pfam0881). [Biosynthesis of cofactors, prosthetic groups, and carriers, Heme, porphyrin, and cobalamin]


Pssm-ID: 162875  Cd Length: 205  Bit Score: 49.75  E-value: 1.41e-07
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 928931667    4 LDFIYKRHSVRKFKDVSVPIEDIHKIIEAATFAPSGKNIQNWRFVVISNKEKIKQIANIIENKNADLATHLENEEEKVkf 83
Cdd:TIGR02476  10 YRLIRERRDVRHFRSDPVPEAVLERLLDAAHHAPSVGFSQPWRFVRVESPATREAVHALFTRANQAAAAIYDGERASQ-- 87
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 928931667   84 tkfvkYATF----FTKAPVLILVYAGPYEATGldvlkkikaptdeiHDLLKRS-P--LIQSVGAAMENIMLSATHLGYGT 156
Cdd:TIGR02476  88 -----YHRLklegIREAPVQLAVFCDDARGEG--------------HGLGRHTmPemLRYSVACAIQNLWLAARAEGLGV 148
                         170       180       190       200
                  ....*....|....*....|....*....|....*....|..
gi 928931667  157 CWMTSqnYAAKEIEDFVGFKeEGYFLAAMTPLGVPDGEPKSP 198
Cdd:TIGR02476 149 GWVSI--LDPDAVRRLLGVP-EGWRLVAYLCLGWPDAFYDEP 187
PRK11053 PRK11053
oxygen-insensitive NAD(P)H nitroreductase;
1-60 7.59e-05

oxygen-insensitive NAD(P)H nitroreductase;


Pssm-ID: 182929 [Multi-domain]  Cd Length: 217  Bit Score: 42.27  E-value: 7.59e-05
                         10        20        30        40        50        60
                 ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 928931667   1 MKNLDFIYKRHSVRKFkDVS--VPIEDIHKIIEAATFAPSGKNIQNWRFVVISNKEKIKQIA 60
Cdd:PRK11053   1 MDIVSVAKKRYTTKAF-DPSkkLPAEQIEQIKTLLRFSPSSVNSQPWHFIVASTEEGKARIA 61
 
Name Accession Description Interval E-value
nitroreductase cd20610
nitroreductase family protein; Proteins of this family catalyze the reduction of flavin or ...
7-190 1.17e-79

nitroreductase family protein; Proteins of this family catalyze the reduction of flavin or nitrocompounds using NAD(P)H as electron donor in a obligatory two-electron transfer, utilizing FMN or FAD as cofactor. They are often found to be homodimers. Enzymes of this family are described as NAD(P)H:FMN oxidoreductases, oxygen-insensitive nitroreductase, flavin reductase P, dihydropteridine reductase, NADH oxidase or NADH dehydrogenase.


Pssm-ID: 380331 [Multi-domain]  Cd Length: 167  Bit Score: 235.25  E-value: 1.17e-79
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 928931667   7 IYKRHSVRKFKDVSVPIEDIHKIIEAATFAPSGKNIQNWRFVVISNKEKIKQIANIIENKNADLATHLEN--EEEKVKFT 84
Cdd:cd20610    1 IKKRRSIRKFKPDPVPKEDIEKILEAANWAPSGMNRQNWEFVVVKGGEKIEKIGISIKKKNEEIARLLEKvfAEKPIRFR 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 928931667  85 KFVKYATFFTKAPVLILVYAGPYEatgldvlkkikaptdeihDLLKRSPLIQSVGAAMENIMLSATHLGYGTCWMTSQNY 164
Cdd:cd20610   81 KFRRFFTLFGGAPVLVVVYTEPYK------------------PPEERKPDLQSVSAAIQNLLLAAHALGLGTCWMTGPLY 142
                        170       180
                 ....*....|....*....|....*.
gi 928931667 165 AAKEIEDFVGFkEEGYFLAAMTPLGV 190
Cdd:cd20610  143 AEDEIEEILEI-PDDKELVAVTPLGY 167
NfnB COG0778
Nitroreductase [Energy production and conversion]; Nitroreductase is part of the Pathway ...
4-206 5.03e-47

Nitroreductase [Energy production and conversion]; Nitroreductase is part of the Pathway/BioSystem: Pyrimidine degradation


Pssm-ID: 440541 [Multi-domain]  Cd Length: 163  Bit Score: 152.31  E-value: 5.03e-47
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 928931667   4 LDFIYKRHSVRKFKDVSVPIEDIHKIIEAATFAPSGKNIQNWRFVVISNKEKIKQIANIIENKNADlathleneeekvkf 83
Cdd:COG0778    2 LELLLTRRSVRKFTDKPVSDEELEELLEAARLAPSAGNLQPWRFVVVRDPELRERLAEALAEANQE-------------- 67
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 928931667  84 tkfvkyatFFTKAPVLILVYAGPYEATgldvlkkiKAPTDEIHdllkrspliQSVGAAMENIMLSATHLGYGTCWMTSqn 163
Cdd:COG0778   68 --------WVADAPVLIVVCADPDRSE--------KVPERYAL---------LDAGIAAQNLLLAARALGLGTCWIGG-- 120
                        170       180       190       200
                 ....*....|....*....|....*....|....*....|...
gi 928931667 164 YAAKEIEDFVGFkEEGYFLAAMTPLGVPDGEPKSPSRKPIQEV 206
Cdd:COG0778  121 FDPEKVRELLGL-PEGEEPVALLALGYPAEELNPRPRKPLEEV 162
Nitroreductase pfam00881
Nitroreductase family; The nitroreductase family comprises a group of FMN- or FAD-dependent ...
7-189 8.97e-39

Nitroreductase family; The nitroreductase family comprises a group of FMN- or FAD-dependent and NAD(P)H-dependent enzymes able to metabolize nitrosubstituted compounds.


Pssm-ID: 425926 [Multi-domain]  Cd Length: 168  Bit Score: 131.36  E-value: 8.97e-39
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 928931667    7 IYKRHSVRKFKDVSVPIEDIHKIIEAATFAPSGKNIQNWRFVVISNKEKIKQIANIIENKNADLATHLENEEEKVKFTKF 86
Cdd:pfam00881   1 IRQRRSVRKFDPEPVPKEVLEEILEAARRAPSAGNLQPWRFYVVTDGELRYRLAEAALELLLVEPAAALLLLLRRDANLK 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 928931667   87 VKYATFFTKAPVLILVyagpyeaTGLDVLKKIKAPTDEIHDLLKrspliqSVGAAMENIMLSATHLGYGTCWMTSQNYAA 166
Cdd:pfam00881  81 LLLQDFLRGAPVLIVI-------TASLSTYLRKAAERAYREALL------DAGAAAQNLLLAATSLGLGSCPIGGFDAAA 147
                         170       180
                  ....*....|....*....|...
gi 928931667  167 keIEDFVGFkEEGYFLAAMTPLG 189
Cdd:pfam00881 148 --VRELLGL-PDDERLVGLIAVG 167
nitroreductase cd02139
nitroreductase family protein; A subfamily of the nitroreductase family containing ...
4-206 4.02e-38

nitroreductase family protein; A subfamily of the nitroreductase family containing uncharacterized proteins. Nitroreductase catalyzes the reduction of nitroaromatic compounds such as nitrotoluenes, nitrofurans and nitroimidazoles. This process requires NAD(P)H as electron donor in an obligatory two-electron transfer and uses FMN as cofactor. The enzyme is typically a homodimer.


Pssm-ID: 380316 [Multi-domain]  Cd Length: 165  Bit Score: 129.51  E-value: 4.02e-38
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 928931667   4 LDFIYKRHSVRKFKDVSVPIEDIHKIIEAATFAPSGKNIQNWRFVVISNKEKIKQIANIIENKNadlathleneeekvkf 83
Cdd:cd02139    2 YEAIKKRRSIRKYKPTPVEEEKLLRILEAARLAPSAKNRQPWRFIVVKDKELKEKLAEAANGQK---------------- 65
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 928931667  84 tkfvkyatFFTKAPVLILVYAGPYEATGLDVlkkikaptdeihdllKRSPLIqSVGAAMENIMLSATHLGYGTCWMTSqn 163
Cdd:cd02139   66 --------FIAEAPVVIVACADPSESGMGCG---------------KPYYLV-DVAIAMEHLVLAATEEGLGTCWIGA-- 119
                        170       180       190       200
                 ....*....|....*....|....*....|....*....|...
gi 928931667 164 YAAKEIEDFVGFKEEgYFLAAMTPLGVPDGEPKSPSRKPIQEV 206
Cdd:cd02139  120 FDEDKVKEILGIPEE-YRVVALTPLGYPAEEPPPRPRKPLEEI 161
Nitro_FMN_reductase cd02062
nitroreductase family protein; Proteins of this family catalyze the reduction of flavin or ...
7-189 2.45e-34

nitroreductase family protein; Proteins of this family catalyze the reduction of flavin or nitrocompounds using NAD(P)H as electron donor in a obligatory two-electron transfer, utilizing FMN or FAD as cofactor. They are often found to be homodimers. Enzymes of this family are described as NAD(P)H:FMN oxidoreductases, oxygen-insensitive nitroreductase, flavin reductase P, dihydropteridine reductase, NADH oxidase or NADH dehydrogenase.


Pssm-ID: 380311 [Multi-domain]  Cd Length: 139  Bit Score: 118.94  E-value: 2.45e-34
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 928931667   7 IYKRHSVRKFKDVSVPIEDIHKIIEAATFAPSGKNIQNWRFVVISNKEKIKQIANIIEnknadlathleneeekvkftkf 86
Cdd:cd02062    1 IKTRRSIRKFTDKPVPEEKLRKILEAARLAPSAGNLQPWRFIVVRDREKKEKLAKLAA---------------------- 58
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 928931667  87 vKYATFFTKAPVLILVYAGPYEAtgldvlkkikaptdeihdllkRSPLIQSVGAAMENIMLSATHLGYGTCWMTSQNYAA 166
Cdd:cd02062   59 -PNQKFIAGAPVVIVVVADPDKS---------------------RPWALEDAGAAAQNLLLAAAALGLGSCWIGGFDFRE 116
                        170       180
                 ....*....|....*....|...
gi 928931667 167 KEIEDFVGFkEEGYFLAAMTPLG 189
Cdd:cd02062  117 DKVRELLGI-PENLRPVALIAIG 138
PnbA_NfnB-like cd02136
nitroreductase similar to Mycobacterium smegmatis NfnB; Members of this family utilize FMN as ...
7-206 9.94e-30

nitroreductase similar to Mycobacterium smegmatis NfnB; Members of this family utilize FMN as a cofactor and catalyze reduction of a variety of nitroaromatic compounds, including nitrofurans, nitrobenzens, nitrophenol, nitrobenzoate and quinones by using either NADH or NADPH as a source of reducing equivalents in an obligatory two-election transfer mechanism. The enzyme is typically a homodimer. Mycobacterium smegmatis nitroreductase NfnB plays a role in resistance to benzothiazinone.


Pssm-ID: 380313 [Multi-domain]  Cd Length: 152  Bit Score: 107.67  E-value: 9.94e-30
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 928931667   7 IYKRHSVRKFKDVSVPIEDIHKIIEAATFAPSGKNIQNWRFVVISNK--EKIKQIaniienknadlathleneeekvkft 84
Cdd:cd02136    2 IKSRRSVRAFKDKPVPKETIEKILEAARRAPSGKNTQPWRVYVVTGKarERLKKA------------------------- 56
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 928931667  85 kfvkyatFFTkAPVLILVYagpyeatgldvLKKIKAPTDeihdllkrsplIQSVGAAMENIMLSATHLGYGTCWmtsQNY 164
Cdd:cd02136   57 -------FFG-APVALFLT-----------MDKVLGPWS-----------WFDLGAFLQNLMLAAHALGLGTCP---QGA 103
                        170       180       190       200
                 ....*....|....*....|....*....|....*....|....*....
gi 928931667 165 AAK---EIEDFVGFKEEGYFLAAMtPLGVPDGE----PKSPSRKPIQEV 206
Cdd:cd02136  104 LAGypdVVRKELGIPDDEELVCGI-ALGYPDPDapvnQFRTPREPLEEF 151
nitroreductase cd02150
nitroreductase family protein; A subfamily of the nitroreductase family containing ...
7-200 3.08e-28

nitroreductase family protein; A subfamily of the nitroreductase family containing uncharacterized proteins. Nitroreductase catalyzes the reduction of nitroaromatic compounds such as nitrotoluenes, nitrofurans and nitroimidazoles. This process requires NAD(P)H as electron donor in an obligatory two-electron transfer and uses FMN as cofactor. The enzyme is typically a homodimer.often found to be homodimers.


Pssm-ID: 380325 [Multi-domain]  Cd Length: 156  Bit Score: 103.83  E-value: 3.08e-28
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 928931667   7 IYKRHSVRKFKDVSVPIEDIHKIIEAATFAPSGKNIQNWRFVVISNKEKIKQIAniienknadlathleneeekvkftKF 86
Cdd:cd02150    1 ILTRRSIRKYTDKPVEEEDIEKLLRAAMAAPSAGNQQPWHFIVVTDREKLDKIA------------------------EA 56
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 928931667  87 VKYATFFTKAPVLILVYAGPyeatgldvlkkikaptdeihDLLKRSPL-IQSVGAAMENIMLSATHLGYGTCWMtsqnyA 165
Cdd:cd02150   57 HPYGKMLKEAPLAIVVCGDP--------------------SKEKAPGYwVQDCSAATENILLAAHALGLGAVWL-----G 111
                        170       180       190       200
                 ....*....|....*....|....*....|....*....|.
gi 928931667 166 AKEIEDFV-GFKE-----EGYFLAAMTPLGVPDGEPKSPSR 200
Cdd:cd02150  112 VYPFEERVkAIREilnipENIIPFCVIALGYPAEEKEPKDR 152
nitroreductase cd20608
nitroreductase family protein; Proteins of this family catalyze the reduction of flavin or ...
4-189 8.63e-27

nitroreductase family protein; Proteins of this family catalyze the reduction of flavin or nitrocompounds using NAD(P)H as electron donor in a obligatory two-electron transfer, utilizing FMN or FAD as cofactor. They are often found to be homodimers. Enzymes of this family are described as NAD(P)H:FMN oxidoreductases, oxygen-insensitive nitroreductase, flavin reductase P, dihydropteridine reductase, NADH oxidase or NADH dehydrogenase.


Pssm-ID: 380329 [Multi-domain]  Cd Length: 145  Bit Score: 99.72  E-value: 8.63e-27
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 928931667   4 LDFIYKRHSVRKFKDVSVPIEDIHKIIEAATFAPSGKNIQNWRFVVISNKEKIKQIAniienknadlathleneeekvKF 83
Cdd:cd20608    1 FEAIKTRRSVRRFSDKPVEEEKLEKILEAARLAPSWANKQCWRFIVVTDKETLSELA---------------------KK 59
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 928931667  84 TKFVKyaTFFTKAPVLILVYAGPYEATGLDVLKKIKAptdeihdllkrspliqSVGAAMENIMLSATHLGYGTCWMTSQN 163
Cdd:cd20608   60 ESPSN--GWLKDAPVIIVVCADPKDSGWLNGQNYYLV----------------DAAIAMQNLMLAATDLGLGTCWIGAFD 121
                        170       180
                 ....*....|....*....|....*..
gi 928931667 164 YA-AKEIedfVGFKEEGYFLaAMTPLG 189
Cdd:cd20608  122 EKkVKEI---LGIPENIRVV-ALTPLG 144
nitroreductase cd02151
nitroreductase family protein; A subfamily of the nitroreductase family containing ...
5-197 1.89e-26

nitroreductase family protein; A subfamily of the nitroreductase family containing uncharacterized proteins. Nitroreductase catalyzes the reduction of nitroaromatic compounds such as nitrotoluenes, nitrofurans and nitroimidazoles. This process requires NAD(P)H as electron donor in an obligatory two-electron transfer and uses FMN as cofactor. The enzyme is typically a homodimer.often found to be homodimers..


Pssm-ID: 380326 [Multi-domain]  Cd Length: 157  Bit Score: 99.14  E-value: 1.89e-26
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 928931667   5 DFIYKRHSVRKFKDVSVPIEDIHKIIEAATFAPSGKNIQNWRFVVISNKEKIKQIANIienknadlathleneeeKVKFT 84
Cdd:cd02151    1 ELLKKRRSIRKYTDEPIEEEKLEEILEAALLAPSSRNSRPVEFIVVDDKETLKKLSEC-----------------KPHGS 63
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 928931667  85 KFVKyatfftKAPVLILVYAGPyeaTGLDVLkkikaptdeIHDLlkrspliqSVgaAMENIMLSATHLGYGTCW------ 158
Cdd:cd02151   64 AFLK------GAPAAIVVLADT---EKSDTW---------IEDA--------SI--AATYIQLAAESLGLGSCWiqirnr 115
                        170       180       190       200
                 ....*....|....*....|....*....|....*....|....
gi 928931667 159 MTSQNyaaKEIEDFVgfKE-----EGYFLAAMTPLGVPDGEPKS 197
Cdd:cd02151  116 ETQDG---KTAEEYV--REllgipENYRVLCIIALGYPDEEKPP 154
YdjA-like cd02135
nitroreductase family protein similar to Escherichia coli YdjA; A subfamily of the ...
4-189 3.32e-25

nitroreductase family protein similar to Escherichia coli YdjA; A subfamily of the nitroreductase family containing uncharacterized proteins that are similar to nitroreductase YdjA from Escherichia coli. Nitroreductase catalyzes the reduction of nitroaromatic compounds such as nitrotoluenes, nitrofurans and nitroimidazoles. This process requires NAD(P)H as electron donor in an obligatory two-electron transfer and uses FMN as cofactor. The enzyme is typically a homodimer. Members of this family are also called NADH dehydrogenase, oxygen-insensitive NAD(P)H nitrogenase or dihydropteridine reductase.


Pssm-ID: 380312 [Multi-domain]  Cd Length: 162  Bit Score: 96.13  E-value: 3.32e-25
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 928931667   4 LDFIYKRHSVRKFKD-VSVPIEDIHKIIEAATFAPSGKNIQNWRFVVISNKEKikqianiiENKNADLATHLENEEEKVK 82
Cdd:cd02135    1 LELIKTRRSIRKFKLtGAPPEEQLEELLEAAMWAPNHGKLEPWRFIVVTGEGR--------ERLAELLAAAAAARAPGAD 72
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 928931667  83 FTKFVKYATFFTKAPVLILVYAGPYEatgldvlkKIKAPTDEihDLLkrspliqSVGAAMENIMLSATHLGYGTCWMTSQ 162
Cdd:cd02135   73 PEKLEKAREKALRAPVVIAVVAKPDE--------DPKVPEWE--QYA-------AVGAAVQNLLLAAHALGLGAVWRTGP 135
                        170       180
                 ....*....|....*....|....*..
gi 928931667 163 NYAAKEIEDFVGFkEEGYFLAAMTPLG 189
Cdd:cd02135  136 VTYDPAVREALGL-PEDERIVGFLYLG 161
nitroreductase cd20609
nitroreductase family protein; A subfamily of the nitroreductase family containing ...
4-189 4.15e-24

nitroreductase family protein; A subfamily of the nitroreductase family containing uncharacterized proteins. Nitroreductase catalyzes the reduction of nitroaromatic compounds such as nitrotoluenes, nitrofurans and nitroimidazoles. This process requires NAD(P)H as electron donor in an obligatory two-electron transfer and uses FMN as cofactor. The enzyme is typically a homodimer.often found to be homodimers.


Pssm-ID: 380330 [Multi-domain]  Cd Length: 145  Bit Score: 92.84  E-value: 4.15e-24
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 928931667   4 LDFIYKRHSVRKFKDVSVPIEDIHKIIEAATFAPSGKNIQNWRFVVISNKEKIKQIANIienknadlathleneeekvkf 83
Cdd:cd20609    3 LELAKKRYSVRKFSDKPVEKEKLDKILEAGRLAPTAVNYQPQRILVVRSEEALEKLAKA--------------------- 61
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 928931667  84 tkfvkYATFFTkAPVLILVYAGPYEATgldvlkkiKAPTDeihdllKRSPLIQSVGAAMENIMLSATHLGYGTCWMTsqN 163
Cdd:cd20609   62 -----TPRFFG-APLVIVVCYDKDESW--------KRPYD------GKDSGDIDAAIVATHMMLAATELGLGTCWVG--N 119
                        170       180
                 ....*....|....*....|....*.
gi 928931667 164 YAAKEIEDFVGFkEEGYFLAAMTPLG 189
Cdd:cd20609  120 FDPEKVREAFNL-PENLEPVAILPLG 144
MhqN-like cd02137
nitroreductase family protein similar to the NAD(P)H nitroreductase MhqN; A diverse subfamily ...
4-206 9.74e-23

nitroreductase family protein similar to the NAD(P)H nitroreductase MhqN; A diverse subfamily of the nitroreductase family containing uncharacterized proteins; includes nitroreductases MhqN, YodC, YdgI, DrgA. Nitroreductase catalyzes the reduction of nitroaromatic compounds such as nitrotoluenes, nitrofurans and nitroimidazoles. This process requires NAD(P)H as electron donor in an obligatory two-electron transfer and uses FMN as cofactor. The enzyme is typically a homodimer.


Pssm-ID: 380314 [Multi-domain]  Cd Length: 147  Bit Score: 89.22  E-value: 9.74e-23
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 928931667   4 LDFIYKRHSVRKF-KDVSVPIEDIHKIIEAATFAPSGKNIQNWRFVVISNKEKIKQIANIIENKNAdlathleneeekvk 82
Cdd:cd02137    1 LEVIKSRRSVRNFdPDHKIPKEELKEILELATLAPSSFNLQPWRFVVVRDPELKAKLAEAAYNQPQ-------------- 66
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 928931667  83 ftkfvkyatfFTKAPVLILVyagpyeatgldvlkkikaPTDeihdllkrspliQSVGAAMENIMLSATHLGYGTCWMTSQ 162
Cdd:cd02137   67 ----------VTTASAVILV------------------LGD------------LNAGLAAMNLMLAAKAKGYDTCPMGGF 106
                        170       180       190       200
                 ....*....|....*....|....*....|....*....|....*.
gi 928931667 163 NYAA-KEIedfvgFK-EEGYFLAAMTPLGVPDGEPKSPSRKPIQEV 206
Cdd:cd02137  107 DKEKvAEL-----LNlPDRYVPVLLIAIGKAADKAPRSGRLPVDEV 147
nitroreductase_FeS-like cd02143
nitroreductases with an N-terminal iron-sulfur cluster-binding domain; Members of this family ...
6-193 1.49e-21

nitroreductases with an N-terminal iron-sulfur cluster-binding domain; Members of this family utilize FMN as a cofactor. This family may be involved in the reduction of flavin or nitroaromatic compounds via an obligatory two-electron transfer. Nitroreductase is homodimer. Each subunit contains one FMN molecule.


Pssm-ID: 380319 [Multi-domain]  Cd Length: 187  Bit Score: 87.53  E-value: 1.49e-21
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 928931667   6 FIYKRHSVRKFKDVSVPIEDIHKIIEAATFAPSGKNIQNWRFVVISNKEKIKQIANIIENKNADLATHLENEEEKVKFTK 85
Cdd:cd02143    1 LLRSRRSIRRYKDKPVPRETLEKLLDIARYAPTGHNSQPVHWLVVDDPEKVRRLAELVIDWMRELIKEDPELAGKLFLDG 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 928931667  86 FVKYA-----TFFTKAPVLILVYAGPYEATgldvlkkikAPTDeihdllkrsPLIqsvgaAMENIMLSATHLGYGTCWMt 160
Cdd:cd02143   81 IVAAWekgidVILRGAPHLVVAHAPKDAPT---------PPVD---------CAI-----ALTYLELAAPSLGLGTCWA- 136
                        170       180       190       200
                 ....*....|....*....|....*....|....*....|
gi 928931667 161 sqnyaakeiedfvgfkeeGYFLAAMT---P----LGVPDG 193
Cdd:cd02143  137 ------------------GFFTAAANnypPlreaLGLPEG 158
iodotyrosine_dehalogenase cd02144
iodotyrosine dehalogenase; Iodotyrosine dehalogenase catalyzes the removal of iodine from the ...
4-206 1.17e-20

iodotyrosine dehalogenase; Iodotyrosine dehalogenase catalyzes the removal of iodine from the 3, 5 positions of L-tyosine in thyroid, liver and kidney, using NADPH as electron donor. This enzyme is a homolog of the nitroreductase family. These enzymes are usually homodimers.


Pssm-ID: 380320  Cd Length: 192  Bit Score: 85.28  E-value: 1.17e-20
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 928931667   4 LDFIYKRHSVRKFKDVSVPIEDIHKIIEAATFAPSGKNIQNWRFVVISN---KEKIKQIANIIENKN-ADLATHLENEEE 79
Cdd:cd02144    2 YELMKKRRSVRDFSSEPVPREVIENAIRTAGTAPSGANTQPWTFVVVSDpeiKRKIREAAEEEEKEFyEKRMGEEWVWDL 81
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 928931667  80 KVKFTKFVKyaTFFTKAPVLILVYAGPYEATglDVLKKIKAPTDEIhdllkrspliqSVGAAMeNIMLSATH-LGYGTCW 158
Cdd:cd02144   82 KPLGTNWEK--PYLTEAPYLIVVFKQKYGVL--PDGKKKKHYYNEE-----------SVGIAV-GILLAALHnAGLVTLT 145
                        170       180       190       200       210
                 ....*....|....*....|....*....|....*....|....*....|
gi 928931667 159 MTSQNyaAKEIEDFVGFkEEGYFLAAMTPLGVPDGEPKSPS--RKPIQEV 206
Cdd:cd02144  146 HTPSP--MPFLRDLLGR-PKNEKPLLLLPVGYPAEDATVPDlkRKPLEEI 192
nitroreductase cd03370
uncharacterized nitroreductase family proteins; Nitroreductase family containing Thermus ...
7-194 2.95e-16

uncharacterized nitroreductase family proteins; Nitroreductase family containing Thermus thermophilus NADH oxidase and other, uncharacterized proteins. Nitroreductase catalyzes the reduction of nitroaromatic compounds such as nitrotoluenes, nitrofurans and nitroimidazoles. This process requires NAD(P)H as electron donor in an obligatory two-electron transfer and uses FMN as cofactor. The enzyme is typically a homodimer.


Pssm-ID: 380327 [Multi-domain]  Cd Length: 191  Bit Score: 73.51  E-value: 2.95e-16
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 928931667   7 IYKRHSVRKFKDVSVPIEDIHKIIEAATFAPSGKNIQNWRFVVISN---KEKIKQIAniienknadlathleNEEEKVkf 83
Cdd:cd03370    5 IESRRSIRKYTQEPVPDEDLREILRLAGLAPSAWNIQPWRFVVVRDaelKEQLQAAA---------------YGQAQV-- 67
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 928931667  84 tkfvkyatffTKAPVLILVYAgpyeatglDVLKKIKAPTDEIHDLL---KRSPLIQSV---------------GAAMENI 145
Cdd:cd03370   68 ----------TSAPAVIVIYS--------DMEDALANLEETIHPGLseeRRQREAAGLrgafgkmsveqrgqwGLAQANI 129
                        170       180       190       200       210       220
                 ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 928931667 146 -----MLSATHLGYGTCWMtsqnyaakeiedfVGFKEEGY----------FLAAMTPLGVPDGE 194
Cdd:cd03370  130 algflLLAAQSLGYDTSPM-------------LGFDPEKVkallglpehvTIAALVALGKPAEE 180
TdsD-like cd02138
nitroreductase similar to Burkholderia pseudomallei TdsD; A subfamily of the nitroreductase ...
7-210 3.62e-15

nitroreductase similar to Burkholderia pseudomallei TdsD; A subfamily of the nitroreductase family containing uncharacterized proteins that are similar to Burkholderia pseudomallei TdsD, may be involved in the processing of organosulfur compounds. Nitroreductase catalyzes the reduction of nitroaromatic compounds such as nitrotoluenes, nitrofurans and nitroimidazoles. This process requires NAD(P)H as electron donor in an obligatory two-electron transfer and uses FMN as cofactor. The enzyme is typically a homodimer.


Pssm-ID: 380315 [Multi-domain]  Cd Length: 174  Bit Score: 70.27  E-value: 3.62e-15
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 928931667   7 IYKRHSVRKFKDVSVPIEDIHKIIEAATFAPSGKNIQNWRFVVISNKEKI-KQIANIIENKNADLATHleneeekvkftk 85
Cdd:cd02138    2 IAERWSPRAFSPEPISEEDLLSLFEAARWAPSCFNEQPWRFVVARRDTEAfEKLLDLLAEGNQSWAKN------------ 69
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 928931667  86 fvkyatfftkAPVLILVYAgpyeATGLDvlKKIKAPTDEIHDLlkrspliqsvGAAMENIMLSATHLGYGTCWMTsqnya 165
Cdd:cd02138   70 ----------APVLIVVLA----KTEFD--HNGKPNRYALFDT----------GAAVANLALQATALGLVVHQMA----- 118
                        170       180       190       200
                 ....*....|....*....|....*....|....*....|....*
gi 928931667 166 akeiedfvGFKEEgyflAAMTPLGVPDGEpkspsrkpiqEVMTII 210
Cdd:cd02138  119 --------GFDPE----KAKEALGIPDEY----------EPITMI 141
BluB cd02145
5,6-dimethylbenzimidazole synthase; BluB catalyzes the O2-dependent conversion of FMNH2 to 5, ...
7-198 3.18e-14

5,6-dimethylbenzimidazole synthase; BluB catalyzes the O2-dependent conversion of FMNH2 to 5,6-dimethylbenzimidazole (DMB), a component of vitamin B12; is is a subfamily of the nitroreductase family; nitroreductases typically reduce their substrates by using NAD(P)H as electron donor and often use FMN as a cofactor.


Pssm-ID: 380321  Cd Length: 196  Bit Score: 68.15  E-value: 3.18e-14
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 928931667   7 IYKRHSVRKFKDVSVPIEDIHKIIEAATFAPSGKNIQNWRFVVISNKEKIKQIANIIENKNADLATHLENEEEKvkftkf 86
Cdd:cd02145    4 IRWRRDVRHFRPDPVPEEVLERLLQAAHLAPSVGLMQPWRFVRVRSAATRKAVHELFQRANAEAAEMYTGERAA------ 77
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 928931667  87 vKYATF----FTKAPVLILVYAGPYEATGLDVLKKIKAPTDEihdllkrspliQSVGAAMENIMLSATHLGYGTCWMTSQ 162
Cdd:cd02145   78 -QYRTLklegIEEAPLQLAVFCDRARAGGHGLGRTTMPEMDL-----------YSSVCAVQNLWLAARAEGLGVGWVSIL 145
                        170       180       190
                 ....*....|....*....|....*....|....*.
gi 928931667 163 NYaaKEIEDFVGFKEEGYFLAAMTpLGVPDGEPKSP 198
Cdd:cd02145  146 DP--DEVKRLLGIPEHWEPVAYLC-IGYPEFFYDEP 178
NfsB-like cd02149
nitroreductase similar to Escherichia coli NfsB; NAD(P)H:FMN oxidoreductase family. This ...
4-206 8.27e-14

nitroreductase similar to Escherichia coli NfsB; NAD(P)H:FMN oxidoreductase family. This domain catalyzes the reduction of flavin, nitrocompound, quinones and azo compounds using NADH or NADPH as an electron donor. The enzyme is a homodimer, and each monomer binds a FMN as co-factor. This family includes FRase I in Vibrio fischeri, wihich reduces FMN into FMNH2 as part of the bioluminescent reaction. The family also includes oxygen-insensitive nitroreductases that use NADH or NADPH as an electron donor in the ping pong bi bi mechanism. This type of nitroreductase can be used in cancer chemotherapy to activate a range of prodrugs.


Pssm-ID: 380324 [Multi-domain]  Cd Length: 156  Bit Score: 66.12  E-value: 8.27e-14
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 928931667   4 LDFIYKRHSVRKFkDVSVPI--EDIHKIIEAATFAPSGKNIQNWRFVVISNKEKIKQIAniienknadlathleneeekv 81
Cdd:cd02149    3 LELLNFRYATKKF-DPNKKIsdEDLETILEALRLSPSSFGLEPWKFLVVENPELKAKLA--------------------- 60
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 928931667  82 KFTKFVKYAtfFTKAPVLILVyagpyeatgldvlkkikaptdeihdLLKRSPLIQSVGAAMENIMLSATHLGYGTCWMTS 161
Cdd:cd02149   61 PAAWFNQPQ--IKDASHVVVF-------------------------LAKKDWSAKQTYIALGNMLLAAAMLGIDSCPIEG 113
                        170       180       190       200
                 ....*....|....*....|....*....|....*....|....*
gi 928931667 162 QNYAAKEiEDFvGFKEEGYFLAAMTPLGVPDGEPKSPSRKPIQEV 206
Cdd:cd02149  114 FDPAKLD-EIL-GLDEKGYKISVMVAFGYRSEEKLPKSRKPLEDV 156
NfsA-like cd02146
nitroreductase similar to Escherichia coli NfsA; This family contains NADPH-dependent flavin ...
4-206 4.69e-13

nitroreductase similar to Escherichia coli NfsA; This family contains NADPH-dependent flavin reductase and oxygen-insensitive nitroreductase. These enzymes are homodimeric flavoproteins that contain one FMN per monomer as a cofactor. Flavin reductase catalyzes the reduction of flavin by using NADPH as an electron donor. Oxygen-insensitive nitroreductase, such as NfsA protein in Escherichia coli, catalyzes reduction of nitrocompounds using NADPH as electron donor.


Pssm-ID: 380322 [Multi-domain]  Cd Length: 229  Bit Score: 65.34  E-value: 4.69e-13
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 928931667   4 LDFIYKRHSVRKFKDVSVPIEDIHKIIEAATFAPSGKNIQNWRFVVISNKEKIKQIANIIENKnadlathleneeekvkf 83
Cdd:cd02146    2 IETILNHRSVRKFTDEPLTDETLETLIAAAQSASTSSNLQAYSVIVVTDPELREKLAELAGNQ----------------- 64
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 928931667  84 tKFVKyatfftKAPVLiLVYAGPYEATGLdVLKKIKAPTDEIHDLlkRSPLIQSVGAAM--ENIMLSATHLGYGTCWMTS 161
Cdd:cd02146   65 -PYVA------QAPVF-LVFCADLYRHQK-IAEEAGGKDVGLDYL--ESFLVGVVDAALaaQNALVAAESLGLGIVYIGG 133
                        170       180       190       200
                 ....*....|....*....|....*....|....*....|....*
gi 928931667 162 QNYAAKEIEDFVGFKEEGYFLAAMTpLGVPDGEPKSPSRKPIQEV 206
Cdd:cd02146  134 IRNNPEEVIELLGLPEYVFPLFGLT-VGHPDPTPEVKPRLPLEAV 177
TM1586_NiRdase pfam14512
Putative TM nitroreductase; Compared with the more traditional NADH oxidase/flavin reductase ...
7-206 8.55e-09

Putative TM nitroreductase; Compared with the more traditional NADH oxidase/flavin reductase family, this family is a duplication, consisting of two similar domains arranged as the subunits of the dimeric NADH oxidase/flavin reductase with one conserved active site.


Pssm-ID: 405236 [Multi-domain]  Cd Length: 214  Bit Score: 53.45  E-value: 8.55e-09
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 928931667    7 IYKRHSVRKFKDVSVPiEDIHKIIEAAtfapsgkniqnwrfvvisnkekIKQIaniieNKNADLATHLENEEEKvKFTKF 86
Cdd:pfam14512   6 IFKRHSVRKYTDEPIP-EELLEELKNA----------------------IDEI-----NKLSGLNIQLVIDDPD-AFKGK 56
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 928931667   87 VKYAtFFTKAPVLILVYAGPYEatGLDVLkkikaptdeihdllkrspliqsVGAAMENIMLSATHLGYGTCW---MTSQN 163
Cdd:pfam14512  57 AKYG-KFKGVPNYIAAYGEKDD--DLLEN----------------------AGYYGEQIVLYATALGLGTCWvggTYSKS 111
                         170       180       190       200
                  ....*....|....*....|....*....|....*....|...
gi 928931667  164 YAAKEIEDfvgfkeeGYFLAAMTPLGVPDGEPKSPSRKPIQEV 206
Cdd:pfam14512 112 KVKAKIKK-------GEKLVIVIAFGYGATKGVRAKRKPLDEL 147
BluB TIGR02476
5,6-dimethylbenzimidazole synthase; A previously published hypothesis that BluB, involved in ...
4-198 1.41e-07

5,6-dimethylbenzimidazole synthase; A previously published hypothesis that BluB, involved in cobalamin biosynthesis, is EC 1.16.8.1 (cob(II)yrinic acid a,c-diamide reductase) is now contradicted by newer work ascribing a role in 5,6-dimethylbenzimidazole (DMB) biosynthesis. The BluB protein is related to the nitroreductase family (pfam0881). [Biosynthesis of cofactors, prosthetic groups, and carriers, Heme, porphyrin, and cobalamin]


Pssm-ID: 162875  Cd Length: 205  Bit Score: 49.75  E-value: 1.41e-07
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 928931667    4 LDFIYKRHSVRKFKDVSVPIEDIHKIIEAATFAPSGKNIQNWRFVVISNKEKIKQIANIIENKNADLATHLENEEEKVkf 83
Cdd:TIGR02476  10 YRLIRERRDVRHFRSDPVPEAVLERLLDAAHHAPSVGFSQPWRFVRVESPATREAVHALFTRANQAAAAIYDGERASQ-- 87
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 928931667   84 tkfvkYATF----FTKAPVLILVYAGPYEATGldvlkkikaptdeiHDLLKRS-P--LIQSVGAAMENIMLSATHLGYGT 156
Cdd:TIGR02476  88 -----YHRLklegIREAPVQLAVFCDDARGEG--------------HGLGRHTmPemLRYSVACAIQNLWLAARAEGLGV 148
                         170       180       190       200
                  ....*....|....*....|....*....|....*....|..
gi 928931667  157 CWMTSqnYAAKEIEDFVGFKeEGYFLAAMTPLGVPDGEPKSP 198
Cdd:TIGR02476 149 GWVSI--LDPDAVRRLLGVP-EGWRLVAYLCLGWPDAFYDEP 187
PRK11053 PRK11053
oxygen-insensitive NAD(P)H nitroreductase;
1-60 7.59e-05

oxygen-insensitive NAD(P)H nitroreductase;


Pssm-ID: 182929 [Multi-domain]  Cd Length: 217  Bit Score: 42.27  E-value: 7.59e-05
                         10        20        30        40        50        60
                 ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 928931667   1 MKNLDFIYKRHSVRKFkDVS--VPIEDIHKIIEAATFAPSGKNIQNWRFVVISNKEKIKQIA 60
Cdd:PRK11053   1 MDIVSVAKKRYTTKAF-DPSkkLPAEQIEQIKTLLRFSPSSVNSQPWHFIVASTEEGKARIA 61
FbiB_C-like cd20607
nitroreductase family domain similar to the C-terminal domain of F420:gamma-glutamyl ligase ...
137-202 1.04e-04

nitroreductase family domain similar to the C-terminal domain of F420:gamma-glutamyl ligase FbiB; Proteins of this family catalyze the reduction of flavin or nitrocompounds using NAD(P)H as electron donor in a obligatory two-electron transfer, utilizing FMN or FAD as cofactor. They are often found to be homodimers. Mycobacterium tuberculosis FbiB, is a two-domain protein and produces F420 with predominantly 5 to 7 L-glutamate residues in the poly-gamma-glutamate tail, its C-terminal domain is homologous to FMN-dependent nitroreductases.


Pssm-ID: 380328 [Multi-domain]  Cd Length: 155  Bit Score: 40.92  E-value: 1.04e-04
                         10        20        30        40        50        60
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 928931667 137 SVGAAMENIMLSATHLGYGTCWMTSQNYAAKEIEDFVGFKEEGYFLAAMTpLGVPDGEPksPSRKP 202
Cdd:cd20607   88 AVGAAVQALLVALAVRGLGSCWIGSTIFAPDVVRDELDLPDDWEPLGAIA-IGYPLEPP--PPRPP 150
PRK14852 PRK14852
hypothetical protein; Provisional
21-48 6.69e-04

hypothetical protein; Provisional


Pssm-ID: 184854 [Multi-domain]  Cd Length: 989  Bit Score: 40.06  E-value: 6.69e-04
                         10        20
                 ....*....|....*....|....*...
gi 928931667  21 VPIEDIHKIIEAATFAPSGKNIQNWRFV 48
Cdd:PRK14852 611 IPLETLHYVARAAMQAPSGDNVQPWRFV 638
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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