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Conserved domains on  [gi|929043689|ref|WP_054066693|]
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ATP-binding protein [Comamonas kerstersii]

Protein Classification

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
envZ super family cl35836
osmolarity sensor protein; Provisional
 31-70 4.45e-11

osmolarity sensor protein; Provisional


The actual alignment was detected with superfamily member PRK09467:

Pssm-ID: 236531 [Multi-domain]  Cd Length: 435  Bit Score: 56.46  E-value: 4.45e-11
                         10        20        30        40
                 ....*....|....*....|....*....|....*....|
gi 929043689  31 GAGLGLTIVQRIIDSAQGQFVLTPAPEGGLLVEIQLPVQQ 70
Cdd:PRK09467 396 GTGLGLAIVKRIVDQHNGKVELGNSEEGGLSARAWLPLTT 435
 
Name Accession Description Interval E-value
envZ PRK09467
osmolarity sensor protein; Provisional
 31-70 4.45e-11

osmolarity sensor protein; Provisional


Pssm-ID: 236531 [Multi-domain]  Cd Length: 435  Bit Score: 56.46  E-value: 4.45e-11
                         10        20        30        40
                 ....*....|....*....|....*....|....*....|
gi 929043689  31 GAGLGLTIVQRIIDSAQGQFVLTPAPEGGLLVEIQLPVQQ 70
Cdd:PRK09467 396 GTGLGLAIVKRIVDQHNGKVELGNSEEGGLSARAWLPLTT 435
HATPase_EnvZ-like cd16950
Histidine kinase-like ATPase domain of two-component sensor histidine kinases similar to ...
 31-67 1.21e-07

Histidine kinase-like ATPase domain of two-component sensor histidine kinases similar to Escherichia coli EnvZ and Pseudomonas aeruginosa BfmS; This family includes the histidine kinase-like ATPase (HATPase) domains of various two-component sensor histidine kinase (HKs) such as Escherichia coli EnvZ of the EnvZ-OmpR two-component regulatory system (TCS), which functions in osmoregulation. It also contains the HATPase domain of Pseudomonas aeruginosa BfmS, the HK of the BfmSR TCS, which functions in the regulation of the rhl quorum-sensing system and bacterial virulence in P. aeruginosa. Proteins having this HATPase domain also contain a histidine kinase dimerization and phosphoacceptor domain (HisKA) and a HAMP sensor domain; some also contain a periplasmic domain.


Pssm-ID: 340426 [Multi-domain]  Cd Length: 101  Bit Score: 44.75  E-value: 1.21e-07
                         10        20        30
                 ....*....|....*....|....*....|....*..
gi 929043689  31 GAGLGLTIVQRIIDSAQGQFVLTPAPEGGLLVEIQLP 67
Cdd:cd16950   65 GTGLGLAIVQRISDAHGGSLTLANRAGGGLCARIELP 101
NtrY COG5000
Signal transduction histidine kinase NtrY involved in nitrogen fixation and metabolism ...
 31-70 3.65e-07

Signal transduction histidine kinase NtrY involved in nitrogen fixation and metabolism regulation [Signal transduction mechanisms];


Pssm-ID: 444024 [Multi-domain]  Cd Length: 422  Bit Score: 45.34  E-value: 3.65e-07
                         10        20        30        40
                 ....*....|....*....|....*....|....*....|
gi 929043689  31 GAGLGLTIVQRIIDSAQGQFVLTPAPEGGLLVEIQLPVQQ 70
Cdd:COG5000  380 GTGLGLAIVKKIVEEHGGTIELESRPGGGTTFTIRLPLAE 419
HATPase_c pfam02518
Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; This family represents the ...
 29-70 3.13e-06

Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; This family represents the structurally related ATPase domains of histidine kinase, DNA gyrase B and HSP90.


Pssm-ID: 460579 [Multi-domain]  Cd Length: 109  Bit Score: 41.20  E-value: 3.13e-06
                          10        20        30        40
                  ....*....|....*....|....*....|....*....|..
gi 929043689   29 MPGAGLGLTIVQRIIDSAQGQFVLTPAPEGGLLVEIQLPVQQ 70
Cdd:pfam02518  68 GGGTGLGLSIVRKLVELLGGTITVESEPGGGTTVTLTLPLAQ 109
HATPase_c smart00387
Histidine kinase-like ATPases; Histidine kinase-, DNA gyrase B-, phytochrome-like ATPases.
 31-69 1.93e-05

Histidine kinase-like ATPases; Histidine kinase-, DNA gyrase B-, phytochrome-like ATPases.


Pssm-ID: 214643 [Multi-domain]  Cd Length: 111  Bit Score: 39.17  E-value: 1.93e-05
                           10        20        30
                   ....*....|....*....|....*....|....*....
gi 929043689    31 GAGLGLTIVQRIIDSAQGQFVLTPAPEGGLLVEIQLPVQ 69
Cdd:smart00387  73 GTGLGLSIVKKLVELHGGEISVESEPGGGTTFTITLPLE 111
 
Name Accession Description Interval E-value
envZ PRK09467
osmolarity sensor protein; Provisional
 31-70 4.45e-11

osmolarity sensor protein; Provisional


Pssm-ID: 236531 [Multi-domain]  Cd Length: 435  Bit Score: 56.46  E-value: 4.45e-11
                         10        20        30        40
                 ....*....|....*....|....*....|....*....|
gi 929043689  31 GAGLGLTIVQRIIDSAQGQFVLTPAPEGGLLVEIQLPVQQ 70
Cdd:PRK09467 396 GTGLGLAIVKRIVDQHNGKVELGNSEEGGLSARAWLPLTT 435
HATPase_EnvZ-like cd16950
Histidine kinase-like ATPase domain of two-component sensor histidine kinases similar to ...
 31-67 1.21e-07

Histidine kinase-like ATPase domain of two-component sensor histidine kinases similar to Escherichia coli EnvZ and Pseudomonas aeruginosa BfmS; This family includes the histidine kinase-like ATPase (HATPase) domains of various two-component sensor histidine kinase (HKs) such as Escherichia coli EnvZ of the EnvZ-OmpR two-component regulatory system (TCS), which functions in osmoregulation. It also contains the HATPase domain of Pseudomonas aeruginosa BfmS, the HK of the BfmSR TCS, which functions in the regulation of the rhl quorum-sensing system and bacterial virulence in P. aeruginosa. Proteins having this HATPase domain also contain a histidine kinase dimerization and phosphoacceptor domain (HisKA) and a HAMP sensor domain; some also contain a periplasmic domain.


Pssm-ID: 340426 [Multi-domain]  Cd Length: 101  Bit Score: 44.75  E-value: 1.21e-07
                         10        20        30
                 ....*....|....*....|....*....|....*..
gi 929043689  31 GAGLGLTIVQRIIDSAQGQFVLTPAPEGGLLVEIQLP 67
Cdd:cd16950   65 GTGLGLAIVQRISDAHGGSLTLANRAGGGLCARIELP 101
NtrY COG5000
Signal transduction histidine kinase NtrY involved in nitrogen fixation and metabolism ...
 31-70 3.65e-07

Signal transduction histidine kinase NtrY involved in nitrogen fixation and metabolism regulation [Signal transduction mechanisms];


Pssm-ID: 444024 [Multi-domain]  Cd Length: 422  Bit Score: 45.34  E-value: 3.65e-07
                         10        20        30        40
                 ....*....|....*....|....*....|....*....|
gi 929043689  31 GAGLGLTIVQRIIDSAQGQFVLTPAPEGGLLVEIQLPVQQ 70
Cdd:COG5000  380 GTGLGLAIVKKIVEEHGGTIELESRPGGGTTFTIRLPLAE 419
KdpD COG2205
K+-sensing histidine kinase KdpD [Signal transduction mechanisms];
18-70 5.84e-07

K+-sensing histidine kinase KdpD [Signal transduction mechanisms];


Pssm-ID: 441807 [Multi-domain]  Cd Length: 239  Bit Score: 44.51  E-value: 5.84e-07
                         10        20        30        40        50
                 ....*....|....*....|....*....|....*....|....*....|...
gi 929043689  18 DHFAQALVLPCMPGAGLGLTIVQRIIDSAQGQFVLTPAPEGGLLVEIQLPVQQ 70
Cdd:COG2205  186 ERFYRGDNSRGEGGTGLGLAIVKRIVEAHGGTIWVESEPGGGTTFTVTLPLAE 238
HATPase_PhoQ-like cd16954
Histidine kinase-like ATPase domain of two-component sensor histidine kinases similar to ...
 30-66 9.60e-07

Histidine kinase-like ATPase domain of two-component sensor histidine kinases similar to Escherichia coli PhoQ and Providencia stuartii AarG; This family includes histidine kinase-like ATPase (HATPase) domain of two-component sensor histidine kinases similar to Escherichia coli PhoQ and Providencia stuartii AarG. PhoQ is the histidine kinase (HK) of the PhoP-PhoQ two-component regulatory system (TCS), which responds to the levels of Mg2+ and Ca2+, controls virulence, mediates the adaptation to Mg2+-limiting environments, and regulates numerous cellular activities. Providencia stuartii AarG is a putative sensor kinase which controls the expression of the 2'-N-acetyltransferase and an intrinsic multiple antibiotic resistance (Mar) response in Providencia stuartii. The AarG product is similar to PhoQ in that it is able to restore wild-type levels of resistance to a Salmonella typhimurium phoQ mutant. However, the expression of the 2'-N-acetyltransferase gene and of aarP (a gene encoding a transcriptional activator of 2'-N-acetyltransferase) are not significantly affected by the levels of Mg2+ or Ca2+. Most proteins in this group contain a histidine kinase dimerization and phosphoacceptor domain (HisKA); some have an accessory HAMP sensor domain, and some have an intracellular membrane -interaction PhoQ sensor domain.


Pssm-ID: 340430 [Multi-domain]  Cd Length: 135  Bit Score: 43.00  E-value: 9.60e-07
                         10        20        30
                 ....*....|....*....|....*....|....*..
gi 929043689  30 PGAGLGLTIVQRIIDSAQGQFVLTPAPEGGLLVEIQL 66
Cdd:cd16954   99 PGQGLGLAIAKEIVEQYGGELSLSDSPLGGARFEVVF 135
HATPase_c pfam02518
Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; This family represents the ...
 29-70 3.13e-06

Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; This family represents the structurally related ATPase domains of histidine kinase, DNA gyrase B and HSP90.


Pssm-ID: 460579 [Multi-domain]  Cd Length: 109  Bit Score: 41.20  E-value: 3.13e-06
                          10        20        30        40
                  ....*....|....*....|....*....|....*....|..
gi 929043689   29 MPGAGLGLTIVQRIIDSAQGQFVLTPAPEGGLLVEIQLPVQQ 70
Cdd:pfam02518  68 GGGTGLGLSIVRKLVELLGGTITVESEPGGGTTVTLTLPLAQ 109
BaeS COG0642
Signal transduction histidine kinase [Signal transduction mechanisms];
31-69 5.42e-06

Signal transduction histidine kinase [Signal transduction mechanisms];


Pssm-ID: 440407 [Multi-domain]  Cd Length: 328  Bit Score: 41.82  E-value: 5.42e-06
                         10        20        30
                 ....*....|....*....|....*....|....*....
gi 929043689  31 GAGLGLTIVQRIIDSAQGQFVLTPAPEGGLLVEIQLPVQ 69
Cdd:COG0642  290 GTGLGLAIVKRIVELHGGTIEVESEPGKGTTFTVTLPLA 328
HATPase_BasS-like cd16940
Histidine kinase-like ATPase domain of two-component sensor histidine kinases similar to ...
 30-66 6.44e-06

Histidine kinase-like ATPase domain of two-component sensor histidine kinases similar to Escherichia coli BasS; This family includes the histidine kinase-like ATPase (HATPase) domains of various two-component sensor histidine kinase (HKs) similar to Escherichia coli BasS HK of the BasS-BasR two-component regulatory system (TCS). Proteins having this HATPase domain also contain a histidine kinase dimerization and phosphoacceptor domain (HisKA); some contain a HAMP sensory domain, while some an N-terminal two-component sensor kinase domain.


Pssm-ID: 340417 [Multi-domain]  Cd Length: 113  Bit Score: 40.47  E-value: 6.44e-06
                         10        20        30
                 ....*....|....*....|....*....|....*..
gi 929043689  30 PGAGLGLTIVQRIIDSAQGQFVLTPAPEGGLLVEIQL 66
Cdd:cd16940   77 GGSGLGLSIVKRIVELHGGQIFLGNAQGGGLEAWVRL 113
WalK COG5002
Sensor histidine kinase WalK [Signal transduction mechanisms];
29-70 1.75e-05

Sensor histidine kinase WalK [Signal transduction mechanisms];


Pssm-ID: 444026 [Multi-domain]  Cd Length: 390  Bit Score: 40.69  E-value: 1.75e-05
                         10        20        30        40
                 ....*....|....*....|....*....|....*....|..
gi 929043689  29 MPGAGLGLTIVQRIIDSAQGQFVLTPAPEGGLLVEIQLPVQQ 70
Cdd:COG5002  348 TGGTGLGLAIVKHIVEAHGGRIWVESEPGKGTTFTITLPLAR 389
HATPase_c smart00387
Histidine kinase-like ATPases; Histidine kinase-, DNA gyrase B-, phytochrome-like ATPases.
 31-69 1.93e-05

Histidine kinase-like ATPases; Histidine kinase-, DNA gyrase B-, phytochrome-like ATPases.


Pssm-ID: 214643 [Multi-domain]  Cd Length: 111  Bit Score: 39.17  E-value: 1.93e-05
                           10        20        30
                   ....*....|....*....|....*....|....*....
gi 929043689    31 GAGLGLTIVQRIIDSAQGQFVLTPAPEGGLLVEIQLPVQ 69
Cdd:smart00387  73 GTGLGLSIVKKLVELHGGEISVESEPGGGTTFTITLPLE 111
PRK10490 PRK10490
sensor protein KdpD; Provisional
 18-75 3.05e-05

sensor protein KdpD; Provisional


Pssm-ID: 236701 [Multi-domain]  Cd Length: 895  Bit Score: 40.02  E-value: 3.05e-05
                         10        20        30        40        50
                 ....*....|....*....|....*....|....*....|....*....|....*...
gi 929043689  18 DHFAQALVLPCMPGAGLGLTIVQRIIDSAQGQFVLTPAPEGGLLVEIQLPVQQLDAID 75
Cdd:PRK10490 832 DKFARGNKESAIPGVGLGLAICRAIVEVHGGTIWAENRPEGGACFRVTLPLETPPELE 889
COG4191 COG4191
Signal transduction histidine kinase regulating C4-dicarboxylate transport system [Signal ...
 31-69 6.66e-05

Signal transduction histidine kinase regulating C4-dicarboxylate transport system [Signal transduction mechanisms];


Pssm-ID: 443345 [Multi-domain]  Cd Length: 361  Bit Score: 39.01  E-value: 6.66e-05
                         10        20        30
                 ....*....|....*....|....*....|....*....
gi 929043689  31 GAGLGLTIVQRIIDSAQGQFVLTPAPEGGLLVEIQLPVQ 69
Cdd:COG4191  323 GTGLGLSISYGIVEKHGGRIEVESEPGGGTTFTITLPLA 361
PRK11360 PRK11360
two-component system sensor histidine kinase AtoS;
31-68 1.47e-04

two-component system sensor histidine kinase AtoS;


Pssm-ID: 236901 [Multi-domain]  Cd Length: 607  Bit Score: 38.03  E-value: 1.47e-04
                         10        20        30
                 ....*....|....*....|....*....|....*...
gi 929043689  31 GAGLGLTIVQRIIDSAQGQFVLTPAPEGGLLVEIQLPV 68
Cdd:PRK11360 564 GTGLGLALSQRIINAHGGDIEVESEPGVGTTFTLYLPI 601
HATPase_CpxA-like cd16949
Histidine kinase-like ATPase domain of two-component sensor histidine kinases similar to ...
 30-67 1.50e-04

Histidine kinase-like ATPase domain of two-component sensor histidine kinases similar to Escherichia coli CpxA; This family includes the histidine kinase-like ATPase (HATPase) domains of two-component sensor histidine kinase (HKs) similar to Escherichia coli CpxA, HK of the CpxA-CpxR two-component regulatory system (TCS) which may function in acid stress and in cell wall stability. Proteins having this HATPase domain also contain a histidine kinase dimerization and phosphoacceptor domain (HisKA) and a HAMP sensor domain; some also contain a CpxA family periplasmic domain.


Pssm-ID: 340425 [Multi-domain]  Cd Length: 104  Bit Score: 36.53  E-value: 1.50e-04
                         10        20        30
                 ....*....|....*....|....*....|....*...
gi 929043689  30 PGAGLGLTIVQRIIDSAQGQFVLTPAPEGGLLVEIQLP 67
Cdd:cd16949   66 GGTGLGLAIAERAIEQHGGKIKASNRKPGGLRVRIWLP 103
PRK10755 PRK10755
two-component system sensor histidine kinase PmrB;
31-70 1.51e-04

two-component system sensor histidine kinase PmrB;


Pssm-ID: 236751 [Multi-domain]  Cd Length: 356  Bit Score: 37.64  E-value: 1.51e-04
                         10        20        30        40
                 ....*....|....*....|....*....|....*....|.
gi 929043689  31 GAGLGLTIVQRIIDSAQGQFVLTPAPE-GGLLVEIQLPVQQ 70
Cdd:PRK10755 312 GIGLGLSIVSRITQLHHGQFFLQNRQErSGTRAWVWLPKAQ 352
HATPase_NtrY-like cd16944
Histidine kinase-like ATPase domain of two-component sensor histidine kinases similar to ...
 31-67 2.06e-04

Histidine kinase-like ATPase domain of two-component sensor histidine kinases similar to Azorhizobium caulinodans NtrY; This family includes the histidine kinase-like ATPase (HATPase) domains of various histidine kinases (HKs) of two-component signal transduction systems (TCSs) such as Azorhizobium caulinodans ORS571 NtrY of the NtrY-NtrX TCS, which is involved in nitrogen fixation and metabolism. Proteins having this HATPase domain also contain a histidine kinase dimerization and phosphoacceptor domain (HisKA) and a HAMP sensor domain; some also have PAS sensor domains.


Pssm-ID: 340420 [Multi-domain]  Cd Length: 108  Bit Score: 36.36  E-value: 2.06e-04
                         10        20        30
                 ....*....|....*....|....*....|....*..
gi 929043689  31 GAGLGLTIVQRIIDSAQGQFVLTPAPEGGLLVEIQLP 67
Cdd:cd16944   72 GTGLGLAIVKKIMEEHGGRISLSNREAGGACIRIILP 108
PRK10549 PRK10549
two-component system sensor histidine kinase BaeS;
31-72 3.42e-04

two-component system sensor histidine kinase BaeS;


Pssm-ID: 182539 [Multi-domain]  Cd Length: 466  Bit Score: 36.92  E-value: 3.42e-04
                         10        20        30        40
                 ....*....|....*....|....*....|....*....|..
gi 929043689  31 GAGLGLTIVQRIIDSAQGQFVLTPAPEGGLLVEIQLPVQQLD 72
Cdd:PRK10549 421 GSGLGLAICLNIVEAHNGRIIAAHSPFGGVSITVELPLERDL 462
cpxA PRK09470
envelope stress sensor histidine kinase CpxA;
31-70 4.20e-04

envelope stress sensor histidine kinase CpxA;


Pssm-ID: 236532 [Multi-domain]  Cd Length: 461  Bit Score: 36.45  E-value: 4.20e-04
                         10        20        30        40
                 ....*....|....*....|....*....|....*....|
gi 929043689  31 GAGLGLTIVQRIIDSAQGQFVLTPAPEGGLLVEIQLPVQQ 70
Cdd:PRK09470 420 GTGLGLAIVENAIQQHRGWVKAEDSPLGGLRLTIWLPLYK 459
PRK10815 PRK10815
two-component system sensor histidine kinase PhoQ;
30-72 4.98e-04

two-component system sensor histidine kinase PhoQ;


Pssm-ID: 182754 [Multi-domain]  Cd Length: 485  Bit Score: 36.53  E-value: 4.98e-04
                         10        20        30        40
                 ....*....|....*....|....*....|....*....|...
gi 929043689  30 PGAGLGLTIVQRIIDSAQGQFVLTPAPEGGLLVEIQLPVQQLD 72
Cdd:PRK10815 440 PGQGLGLSVAREITEQYEGKISAGDSPLGGARMEVIFGRQHST 482
COG4251 COG4251
Bacteriophytochrome (light-regulated signal transduction histidine kinase) [Signal ...
 30-70 5.29e-04

Bacteriophytochrome (light-regulated signal transduction histidine kinase) [Signal transduction mechanisms];


Pssm-ID: 443393 [Multi-domain]  Cd Length: 503  Bit Score: 36.30  E-value: 5.29e-04
                         10        20        30        40
                 ....*....|....*....|....*....|....*....|.
gi 929043689  30 PGAGLGLTIVQRIIDSAQGQFVLTPAPEGGLLVEIQLPVQQ 70
Cdd:COG4251  462 EGTGIGLAIVKKIVERHGGRIWVESEPGEGATFYFTLPKAP 502
CitA COG3290
Sensor histidine kinase DipB regulating citrate/malate metabolism [Signal transduction ...
 33-67 5.61e-04

Sensor histidine kinase DipB regulating citrate/malate metabolism [Signal transduction mechanisms];


Pssm-ID: 442519 [Multi-domain]  Cd Length: 389  Bit Score: 36.37  E-value: 5.61e-04
                         10        20        30
                 ....*....|....*....|....*....|....*
gi 929043689  33 GLGLTIVQRIIDSAQGQFVLTPAPEGGLLVEIQLP 67
Cdd:COG3290  351 GLGLALVKQIVEKYGGTIEVESEEGEGTVFTVRLP 385
HATPase_TutC-TodS-like cd16925
Histidine kinase-like ATPase domain of hybrid sensor histidine kinases similar to Pseudomonas ...
 31-67 8.29e-04

Histidine kinase-like ATPase domain of hybrid sensor histidine kinases similar to Pseudomonas putida TodS and Thauera aromatica TutC; This family includes the histidine kinase-like ATPase (HATPase) domains of various two-component hybrid sensor histidine kinase (HKs) such Pseudomonas putida TodS HK of the TodS-TodT two-component regulatory system (TCS) which controls the expression of a toluene degradation pathway. Thauera aromatica TutC may be part of a TCS that is involved in anaerobic toluene metabolism. Proteins having this HATPase domain also contain a histidine kinase dimerization and phosphoacceptor domain (HisKA), PAS sensor domain(s) and a REC domain.


Pssm-ID: 340402 [Multi-domain]  Cd Length: 110  Bit Score: 34.78  E-value: 8.29e-04
                         10        20        30
                 ....*....|....*....|....*....|....*..
gi 929043689  31 GAGLGLTIVQRIIDSAQGQFVLTPAPEGGLLVEIQLP 67
Cdd:cd16925   74 GTGLGLSIVKEFVELHGGTVTVSDAPGGGALFQVELP 110
HATPase_BaeS-like cd16946
Histidine kinase-like ATPase domain of two-component sensor histidine kinases similar to ...
 31-67 1.38e-03

Histidine kinase-like ATPase domain of two-component sensor histidine kinases similar to Escherichia coli BasS; This family includes the histidine kinase-like ATPase (HATPase) domains of various two-component sensor histidine kinase (HKs) similar to Escherichia coli BaeS HK of the BaeS/BaeR two-component regulatory system (TCS), which responds to envelope stress. Proteins having this HATPase domain also contain a histidine kinase dimerization and phosphoacceptor domain (HisKA), and a HAMP sensory domain.


Pssm-ID: 340422 [Multi-domain]  Cd Length: 109  Bit Score: 34.36  E-value: 1.38e-03
                         10        20        30
                 ....*....|....*....|....*....|....*..
gi 929043689  31 GAGLGLTIVQRIIDSAQGQFVLTPAPEGGLLVEIQLP 67
Cdd:cd16946   73 GSGLGLAICHNIALAHGGTISAEHSPLGGLRLVLTLP 109
NtrB COG3852
Signal transduction histidine kinase NtrB, nitrogen specific [Signal transduction mechanisms];
31-70 2.35e-03

Signal transduction histidine kinase NtrB, nitrogen specific [Signal transduction mechanisms];


Pssm-ID: 443061 [Multi-domain]  Cd Length: 361  Bit Score: 34.44  E-value: 2.35e-03
                         10        20        30        40
                 ....*....|....*....|....*....|....*....|
gi 929043689  31 GAGLGLTIVQRIIDSAQGQFVLTPAPEGGLLVEIQLPVQQ 70
Cdd:COG3852  317 GTGLGLAIVQKIVEQHGGTIEVESEPGKGTTFRIYLPLEQ 356
PRK11100 PRK11100
sensory histidine kinase CreC; Provisional
 33-68 3.59e-03

sensory histidine kinase CreC; Provisional


Pssm-ID: 236846 [Multi-domain]  Cd Length: 475  Bit Score: 34.05  E-value: 3.59e-03
                         10        20        30
                 ....*....|....*....|....*....|....*.
gi 929043689  33 GLGLTIVQRIIDSAQGQFVLTPAPEGGLLVEIQLPV 68
Cdd:PRK11100 438 GLGLAFVREVARLHGGEVTLRNRPEGGVLATLTLPR 473
HATPase_RstB-like cd16939
Histidine kinase-like ATPase domain of two-component sensor histidine kinases similar to ...
 30-68 4.27e-03

Histidine kinase-like ATPase domain of two-component sensor histidine kinases similar to Salmonella typhimurium RstB; This family includes the histidine kinase-like ATPase (HATPase) domains of various two-component sensor histidine kinase (HKs) such as Salmonella typhimurium RstB HK of the RstA-RstB two-component regulatory system (TCS), which regulates expression of the constituents participating in pyrimidine metabolism and iron acquisition, and may be required for regulation of Salmonella motility and invasion. Proteins having this HATPase domain also contain a histidine kinase dimerization and phosphoacceptor domain (HisKA), and a HAMP sensor domain.


Pssm-ID: 340416 [Multi-domain]  Cd Length: 104  Bit Score: 32.79  E-value: 4.27e-03
                         10        20        30
                 ....*....|....*....|....*....|....*....
gi 929043689  30 PGAGLGLTIVQRIIDSAQGQFVLTPAPEGGLLVEIQLPV 68
Cdd:cd16939   66 GGFGLGLAIVHRVALWHGGHVECDDSELGGACFRLTWPR 104
PRK10337 PRK10337
sensor protein QseC; Provisional
 30-62 5.50e-03

sensor protein QseC; Provisional


Pssm-ID: 182388 [Multi-domain]  Cd Length: 449  Bit Score: 33.47  E-value: 5.50e-03
                         10        20        30
                 ....*....|....*....|....*....|...
gi 929043689  30 PGAGLGLTIVQRIIDSAQGQFVLTPAPEGGLLV 62
Cdd:PRK10337 413 TGSGLGLSIVRRIAKLHGMNVSFGNAPEGGFEA 445
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
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