|
Name |
Accession |
Description |
Interval |
E-value |
| PatZN |
COG1042 |
Acyl-CoA synthetase (NDP forming) [Energy production and conversion]; |
1-700 |
0e+00 |
|
Acyl-CoA synthetase (NDP forming) [Energy production and conversion];
Pssm-ID: 440664 [Multi-domain] Cd Length: 708 Bit Score: 885.24 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 936194510 1 MSQRGLEALLRPKSIAVIGASMKPNRAGYLMMRNLLAGGFNGPVLPVTPAWKAVLGVLAWPNINSLPFSPDLAVLCTNAS 80
Cdd:COG1042 1 MSTRSLDALFRPRSVAVIGASDRPGKVGGRVLRNLLEGGFKGKIYPVNPKYDEVLGLPCYPSVADLPEPPDLAVIAVPAE 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 936194510 81 RNLALLEALGEKGCKTCIILSAP--------SAQHAELLACASRYNIRLLGPNSLGLLAPWQGLNASFSPVPIKRGKLAF 152
Cdd:COG1042 81 TVPDVVEECGEKGVKAAVVISAGfaetgeegAALEQELLEIARRYGMRLLGPNCLGLINPATGLNATFAPVPPLPGNIAL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 936194510 153 ISQSAAVSNTILDWAQQREMGFSYFIALGDSLDIDVDELLDYLARDSKTSAILLYLEHLSDARRFVSAARSASRNKPILV 232
Cdd:COG1042 161 VSQSGALGTAILDWAAARGIGFSHFVSLGNEADVDFADLLDYLADDPDTRVILLYLEGIRDGRRFLSAARAAARGKPVVV 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 936194510 233 IKSGRSPAAQR--LLHTS--AGMDPAWDAAIQRAGLLRVQDTHELFSAVETLSHMRPLRGDRLMIISNGAAPAALALDEL 308
Cdd:COG1042 241 LKSGRSEAGARaaASHTGalAGSDAVYDAAFRRAGVIRVDDLEELFDAAEALARQPPPRGRRLAIVTNSGGPGVLAADAL 320
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 936194510 309 WSKNGKLATLSEDTCQKLRDALPEHVDIANPLDLRDDASSEHYVKTLDILLASQDFDALMVIHSPSAAAPGTESAQALIE 388
Cdd:COG1042 321 EDLGLELAELSEETQAALRAVLPPFASVGNPVDITGDADPERYAAALEALLADPNVDAVLVILTPTAMTDPEEVAEALIE 400
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 936194510 389 AVKHHprGKFVslLTNWCGEFSSQEARRLFSEAGLPTYRTPEGTITAFMHMVEYRRNQKQLRETPAlPDNLTTNTAEAHN 468
Cdd:COG1042 401 AAKGS--GKPV--LASWMGGDSVAEARRLLREAGIPTFRTPERAVRALAALVRYRRNQERLMETPA-SEDFDPDRERARA 475
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 936194510 469 LLQQAIAEGATSLDTHEVQPILQAYGLHTLPTWIASDSAEAVHIAEQIGYPVALKLRSPDIPHKSEVQGVMLYLRTATEV 548
Cdd:COG1042 476 IIEAALAEGRGVLTEAEAKALLAAYGIPVVPTRLARSAEEAVAAAEEIGYPVVLKIVSPDILHKSDVGGVRLNLRDAEAV 555
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 936194510 549 QQAANAIFDRVKMAWPQARIHGLLVQSMANraGAQELRVVVEHDPVFGPLIMLGEGGVEWRPEEQAVVALPPLNMNLARY 628
Cdd:COG1042 556 RAAFEEILARVRAARPDARIDGVLVQPMVP--GGVELIVGVKRDPVFGPVIMFGLGGIFVEVLKDVALRLPPLNEALARE 633
|
650 660 670 680 690 700 710
....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 936194510 629 LVIQGIKNKKIRARSALRPLDIAGLSQLLVQVSNLIVDCPEIQRLDIHPLLASAEEFTALDVTLDIAPFAGD 700
Cdd:COG1042 634 MIRELRAAKLLRGYRGRPPADLDALADVLVRLSQLAADLPEILELDINPLLVVPEGVVAVDARIRLAPPAPP 705
|
|
| AcCoA-syn-alpha |
TIGR02717 |
acetyl coenzyme A synthetase (ADP forming), alpha domain; Although technically reversible, it ... |
6-443 |
2.41e-137 |
|
acetyl coenzyme A synthetase (ADP forming), alpha domain; Although technically reversible, it is believed that this group of ADP-dependent acetyl-CoA synthetases (ACS) act in the direction of acetate and ATP production in the organisms in which it has been characterized. In most species this protein exists as a fused alpha-beta domain polypeptide. In Pyrococcus and related species, however the domains exist as separate polypeptides. This model represents the alpha (N-terminal) domain. In Pyrococcus and related species there appears to have been the development of a paralogous family such that four other proteins are close relatives. In reference, one of these (along with its beta-domain partner) was characterized as ACS-II showing specificity for phenylacetyl-CoA. This model has been constructed to exclude these non-ACS-I paralogs. This may result in new, authentic ACS-I sequences falling below the trusted cutoff.
Pssm-ID: 131764 [Multi-domain] Cd Length: 447 Bit Score: 416.71 E-value: 2.41e-137
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 936194510 6 LEALLRPKSIAVIGASMKPNRAGYLMMRNLLAGGFNGPVLPVTPAWKAVLGVLAWPNINSLPFSPDLAVLCTNASRNLAL 85
Cdd:TIGR02717 1 LEHLFNPKSVAVIGASRDPGKVGYAIMKNLIEGGYKGKIYPVNPKAGEILGVKAYPSVLEIPDPVDLAVIVVPAKYVPQV 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 936194510 86 LEALGEKGCKTCIILSAPSAQ--------HAELLACASRYNIRLLGPNSLGLLAPWQGLNASFSPVPIKRGKLAFISQSA 157
Cdd:TIGR02717 81 VEECGEKGVKGAVVITAGFKEvgeegaelEQELVEIARKYGMRLLGPNCLGIINTHIKLNATFAPTMPKKGGIAFISQSG 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 936194510 158 AVSNTILDWAQQREMGFSYFIALGDSLDIDVDELLDYLARDSKTSAILLYLEHLSDARRFVSAARSASRNKPILVIKSGR 237
Cdd:TIGR02717 161 ALLTALLDWAEKNGVGFSYFVSLGNKADIDESDLLEYLADDPDTKVILLYLEGIKDGRKFLKTAREISKKKPIVVLKSGT 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 936194510 238 SPAAQRLL--HTS--AGMDPAWDAAIQRAGLLRVQDTHELFSAVETLSHMRPLRGDRLMIISNGAAPAALALDELWSKNG 313
Cdd:TIGR02717 241 SEAGAKAAssHTGalAGSDEAYDAAFKQAGVIRADSIEELFDLARLLSNQPLPKGNRVAIITNAGGPGVIATDACEENGL 320
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 936194510 314 KLATLSEDTCQKLRDALPEHVDIANPLDLRDDASSEHYVKTLDILLASQDFDALMVIHSPSAAAPGTESAQALIEAVKHH 393
Cdd:TIGR02717 321 ELAELSEATKNKLRNILPPEASIKNPVDVLGDATPERYAKALKTVAEDENVDGVVVVLTPTAMTDPEEVAKGIIEGAKKS 400
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|
gi 936194510 394 PRgkfVSLLTNWCGEFSSQEARRLFSEAGLPTYRTPEGTITAFMHMVEYR 443
Cdd:TIGR02717 401 NE---KPVVAGFMGGKSVDPAKRILEENGIPNYTFPERAVKALSALYRYA 447
|
|
| ATP-grasp_5 |
pfam13549 |
ATP-grasp domain; This family includes a diverse set of enzymes that possess ATP-dependent ... |
472-690 |
3.84e-89 |
|
ATP-grasp domain; This family includes a diverse set of enzymes that possess ATP-dependent carboxylate-amine ligase activity.
Pssm-ID: 463918 [Multi-domain] Cd Length: 221 Bit Score: 282.06 E-value: 3.84e-89
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 936194510 472 QAIAEGATSLDTHEVQPILQAYGLHTLPTWIASDSAEAVHIAEQIGYPVALKLRSPDIPHKSEVQGVMLYLRTATEVQQA 551
Cdd:pfam13549 1 KALAEGRTVLTEPEAKALLAAYGIPVVPTRLARSPEEAVAAAEEIGYPVVLKIVSPDILHKSDVGGVRLNLRSAEAVRAA 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 936194510 552 ANAIFDRVKMAWPQARIHGLLVQSMANraGAQELRVVVEHDPVFGPLIMLGEGGVEWRPEEQAVVALPPLNMNLARYLvI 631
Cdd:pfam13549 81 YEEILERVRRYRPDARIEGVLVQPMAP--GGRELIVGVTRDPQFGPVIMFGLGGIAVEVLKDVAFRLPPLNMTLAREM-I 157
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|
gi 936194510 632 QGIKNKKIRARSALR-PLDIAGLSQLLVQVSNLIVDCPEIQRLDIHPLLASAEEFTALDV 690
Cdd:pfam13549 158 RRTRAYKLLKGYRGEpPADLDALEDVLVRVSQLVIDFPEIRELDINPLLADEDGVVALDA 217
|
|
| RimL |
COG1670 |
Protein N-acetyltransferase, RimJ/RimL family [Translation, ribosomal structure and biogenesis, ... |
722-874 |
1.52e-17 |
|
Protein N-acetyltransferase, RimJ/RimL family [Translation, ribosomal structure and biogenesis, Posttranslational modification, protein turnover, chaperones];
Pssm-ID: 441276 [Multi-domain] Cd Length: 173 Bit Score: 81.20 E-value: 1.52e-17
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 936194510 722 NGERCLFRPILPEDEPHLQQFISQvtKEDLYYRYFSEIN-EFTHEDLANMTQIDYDREMAFVAVRCKDNhEEILGVTRAI 800
Cdd:COG1670 4 ETERLRLRPLRPEDAEALAELLND--PEVARYLPGPPYSlEEARAWLERLLADWADGGALPFAIEDKED-GELIGVVGLY 80
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 936194510 801 S-DPDNVDAEFAVLVRSDLKGLGLGRRLMEKLIAYTRDH-GLIRLNGITMPNNRGMVALARKLGFVVDVQLEEGIV 874
Cdd:COG1670 81 DiDRANRSAEIGYWLAPAYWGKGYATEALRALLDYAFEElGLHRVEAEVDPDNTASIRVLEKLGFRLEGTLRDALV 156
|
|
| CoA_binding |
smart00881 |
CoA binding domain; This domain has a Rossmann fold and is found in a number of proteins ... |
9-102 |
4.05e-14 |
|
CoA binding domain; This domain has a Rossmann fold and is found in a number of proteins including succinyl CoA synthetases, malate and ATP-citrate ligases.
Pssm-ID: 214881 [Multi-domain] Cd Length: 100 Bit Score: 68.69 E-value: 4.05e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 936194510 9 LLRP-KSIAVIGASMKPNRAGYLMMRNLLAGG--FNGPVLP--VTPawkAVLGVLAWPNINSLP--FSPDLAVLCTNASR 81
Cdd:smart00881 1 LLNPnTSVAVVGASGNLGSFGLAVMRNLLEYGtkFVGGVYPgkVGP---KVDGVPVYDSVAEAPeeTGVDVAVIFVPAEA 77
|
90 100
....*....|....*....|.
gi 936194510 82 NLALLEALGEKGCKTCIILSA 102
Cdd:smart00881 78 APDAIDEAIEAGIKGIVVITE 98
|
|
| Acetyltransf_1 |
pfam00583 |
Acetyltransferase (GNAT) family; This family contains proteins with N-acetyltransferase ... |
750-863 |
7.94e-11 |
|
Acetyltransferase (GNAT) family; This family contains proteins with N-acetyltransferase functions such as Elp3-related proteins.
Pssm-ID: 395465 [Multi-domain] Cd Length: 116 Bit Score: 60.22 E-value: 7.94e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 936194510 750 DLYYRYFSEinEFTHEDLANMTQIDYDREMAFVAVRckdNHEEILGVTRA--ISDPDNVDAEFAVLVRSDLKGLGLGRRL 827
Cdd:pfam00583 6 ELLSEEFPE--PWPDEPLDLLEDWDEDASEGFFVAE---EDGELVGFASLsiIDDEPPVGEIEGLAVAPEYRGKGIGTAL 80
|
90 100 110
....*....|....*....|....*....|....*.
gi 936194510 828 MEKLIAYTRDHGLIRLNGITMPNNRGMVALARKLGF 863
Cdd:pfam00583 81 LQALLEWARERGCERIFLEVAADNLAAIALYEKLGF 116
|
|
|
|
Name |
Accession |
Description |
Interval |
E-value |
| PatZN |
COG1042 |
Acyl-CoA synthetase (NDP forming) [Energy production and conversion]; |
1-700 |
0e+00 |
|
Acyl-CoA synthetase (NDP forming) [Energy production and conversion];
Pssm-ID: 440664 [Multi-domain] Cd Length: 708 Bit Score: 885.24 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 936194510 1 MSQRGLEALLRPKSIAVIGASMKPNRAGYLMMRNLLAGGFNGPVLPVTPAWKAVLGVLAWPNINSLPFSPDLAVLCTNAS 80
Cdd:COG1042 1 MSTRSLDALFRPRSVAVIGASDRPGKVGGRVLRNLLEGGFKGKIYPVNPKYDEVLGLPCYPSVADLPEPPDLAVIAVPAE 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 936194510 81 RNLALLEALGEKGCKTCIILSAP--------SAQHAELLACASRYNIRLLGPNSLGLLAPWQGLNASFSPVPIKRGKLAF 152
Cdd:COG1042 81 TVPDVVEECGEKGVKAAVVISAGfaetgeegAALEQELLEIARRYGMRLLGPNCLGLINPATGLNATFAPVPPLPGNIAL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 936194510 153 ISQSAAVSNTILDWAQQREMGFSYFIALGDSLDIDVDELLDYLARDSKTSAILLYLEHLSDARRFVSAARSASRNKPILV 232
Cdd:COG1042 161 VSQSGALGTAILDWAAARGIGFSHFVSLGNEADVDFADLLDYLADDPDTRVILLYLEGIRDGRRFLSAARAAARGKPVVV 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 936194510 233 IKSGRSPAAQR--LLHTS--AGMDPAWDAAIQRAGLLRVQDTHELFSAVETLSHMRPLRGDRLMIISNGAAPAALALDEL 308
Cdd:COG1042 241 LKSGRSEAGARaaASHTGalAGSDAVYDAAFRRAGVIRVDDLEELFDAAEALARQPPPRGRRLAIVTNSGGPGVLAADAL 320
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 936194510 309 WSKNGKLATLSEDTCQKLRDALPEHVDIANPLDLRDDASSEHYVKTLDILLASQDFDALMVIHSPSAAAPGTESAQALIE 388
Cdd:COG1042 321 EDLGLELAELSEETQAALRAVLPPFASVGNPVDITGDADPERYAAALEALLADPNVDAVLVILTPTAMTDPEEVAEALIE 400
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 936194510 389 AVKHHprGKFVslLTNWCGEFSSQEARRLFSEAGLPTYRTPEGTITAFMHMVEYRRNQKQLRETPAlPDNLTTNTAEAHN 468
Cdd:COG1042 401 AAKGS--GKPV--LASWMGGDSVAEARRLLREAGIPTFRTPERAVRALAALVRYRRNQERLMETPA-SEDFDPDRERARA 475
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 936194510 469 LLQQAIAEGATSLDTHEVQPILQAYGLHTLPTWIASDSAEAVHIAEQIGYPVALKLRSPDIPHKSEVQGVMLYLRTATEV 548
Cdd:COG1042 476 IIEAALAEGRGVLTEAEAKALLAAYGIPVVPTRLARSAEEAVAAAEEIGYPVVLKIVSPDILHKSDVGGVRLNLRDAEAV 555
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 936194510 549 QQAANAIFDRVKMAWPQARIHGLLVQSMANraGAQELRVVVEHDPVFGPLIMLGEGGVEWRPEEQAVVALPPLNMNLARY 628
Cdd:COG1042 556 RAAFEEILARVRAARPDARIDGVLVQPMVP--GGVELIVGVKRDPVFGPVIMFGLGGIFVEVLKDVALRLPPLNEALARE 633
|
650 660 670 680 690 700 710
....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 936194510 629 LVIQGIKNKKIRARSALRPLDIAGLSQLLVQVSNLIVDCPEIQRLDIHPLLASAEEFTALDVTLDIAPFAGD 700
Cdd:COG1042 634 MIRELRAAKLLRGYRGRPPADLDALADVLVRLSQLAADLPEILELDINPLLVVPEGVVAVDARIRLAPPAPP 705
|
|
| AcCoA-syn-alpha |
TIGR02717 |
acetyl coenzyme A synthetase (ADP forming), alpha domain; Although technically reversible, it ... |
6-443 |
2.41e-137 |
|
acetyl coenzyme A synthetase (ADP forming), alpha domain; Although technically reversible, it is believed that this group of ADP-dependent acetyl-CoA synthetases (ACS) act in the direction of acetate and ATP production in the organisms in which it has been characterized. In most species this protein exists as a fused alpha-beta domain polypeptide. In Pyrococcus and related species, however the domains exist as separate polypeptides. This model represents the alpha (N-terminal) domain. In Pyrococcus and related species there appears to have been the development of a paralogous family such that four other proteins are close relatives. In reference, one of these (along with its beta-domain partner) was characterized as ACS-II showing specificity for phenylacetyl-CoA. This model has been constructed to exclude these non-ACS-I paralogs. This may result in new, authentic ACS-I sequences falling below the trusted cutoff.
Pssm-ID: 131764 [Multi-domain] Cd Length: 447 Bit Score: 416.71 E-value: 2.41e-137
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 936194510 6 LEALLRPKSIAVIGASMKPNRAGYLMMRNLLAGGFNGPVLPVTPAWKAVLGVLAWPNINSLPFSPDLAVLCTNASRNLAL 85
Cdd:TIGR02717 1 LEHLFNPKSVAVIGASRDPGKVGYAIMKNLIEGGYKGKIYPVNPKAGEILGVKAYPSVLEIPDPVDLAVIVVPAKYVPQV 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 936194510 86 LEALGEKGCKTCIILSAPSAQ--------HAELLACASRYNIRLLGPNSLGLLAPWQGLNASFSPVPIKRGKLAFISQSA 157
Cdd:TIGR02717 81 VEECGEKGVKGAVVITAGFKEvgeegaelEQELVEIARKYGMRLLGPNCLGIINTHIKLNATFAPTMPKKGGIAFISQSG 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 936194510 158 AVSNTILDWAQQREMGFSYFIALGDSLDIDVDELLDYLARDSKTSAILLYLEHLSDARRFVSAARSASRNKPILVIKSGR 237
Cdd:TIGR02717 161 ALLTALLDWAEKNGVGFSYFVSLGNKADIDESDLLEYLADDPDTKVILLYLEGIKDGRKFLKTAREISKKKPIVVLKSGT 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 936194510 238 SPAAQRLL--HTS--AGMDPAWDAAIQRAGLLRVQDTHELFSAVETLSHMRPLRGDRLMIISNGAAPAALALDELWSKNG 313
Cdd:TIGR02717 241 SEAGAKAAssHTGalAGSDEAYDAAFKQAGVIRADSIEELFDLARLLSNQPLPKGNRVAIITNAGGPGVIATDACEENGL 320
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 936194510 314 KLATLSEDTCQKLRDALPEHVDIANPLDLRDDASSEHYVKTLDILLASQDFDALMVIHSPSAAAPGTESAQALIEAVKHH 393
Cdd:TIGR02717 321 ELAELSEATKNKLRNILPPEASIKNPVDVLGDATPERYAKALKTVAEDENVDGVVVVLTPTAMTDPEEVAKGIIEGAKKS 400
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|
gi 936194510 394 PRgkfVSLLTNWCGEFSSQEARRLFSEAGLPTYRTPEGTITAFMHMVEYR 443
Cdd:TIGR02717 401 NE---KPVVAGFMGGKSVDPAKRILEENGIPNYTFPERAVKALSALYRYA 447
|
|
| ATP-grasp_5 |
pfam13549 |
ATP-grasp domain; This family includes a diverse set of enzymes that possess ATP-dependent ... |
472-690 |
3.84e-89 |
|
ATP-grasp domain; This family includes a diverse set of enzymes that possess ATP-dependent carboxylate-amine ligase activity.
Pssm-ID: 463918 [Multi-domain] Cd Length: 221 Bit Score: 282.06 E-value: 3.84e-89
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 936194510 472 QAIAEGATSLDTHEVQPILQAYGLHTLPTWIASDSAEAVHIAEQIGYPVALKLRSPDIPHKSEVQGVMLYLRTATEVQQA 551
Cdd:pfam13549 1 KALAEGRTVLTEPEAKALLAAYGIPVVPTRLARSPEEAVAAAEEIGYPVVLKIVSPDILHKSDVGGVRLNLRSAEAVRAA 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 936194510 552 ANAIFDRVKMAWPQARIHGLLVQSMANraGAQELRVVVEHDPVFGPLIMLGEGGVEWRPEEQAVVALPPLNMNLARYLvI 631
Cdd:pfam13549 81 YEEILERVRRYRPDARIEGVLVQPMAP--GGRELIVGVTRDPQFGPVIMFGLGGIAVEVLKDVAFRLPPLNMTLAREM-I 157
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|
gi 936194510 632 QGIKNKKIRARSALR-PLDIAGLSQLLVQVSNLIVDCPEIQRLDIHPLLASAEEFTALDV 690
Cdd:pfam13549 158 RRTRAYKLLKGYRGEpPADLDALEDVLVRVSQLVIDFPEIRELDINPLLADEDGVVALDA 217
|
|
| Succ_CoA_lig |
pfam13607 |
Succinyl-CoA ligase like flavodoxin domain; This domain contains the catalytic domain from ... |
147-280 |
2.44e-55 |
|
Succinyl-CoA ligase like flavodoxin domain; This domain contains the catalytic domain from Succinyl-CoA ligase alpha subunit and other related enzymes. A conserved histidine is involved in phosphoryl transfer.
Pssm-ID: 433345 [Multi-domain] Cd Length: 138 Bit Score: 187.29 E-value: 2.44e-55
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 936194510 147 RGKLAFISQSAAVSNTILDWAQQREMGFSYFIALGDSLDIDVDELLDYLARDSKTSAILLYLEHLSDARRFVSAARSASR 226
Cdd:pfam13607 1 PGNIALVSQSGALGAALLDWARSRGIGFSKFVSLGNEADVDFADLLEYLADDPETRVILLYLEGIRDGRRFLRAARRAAR 80
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|....*...
gi 936194510 227 NKPILVIKSGRSPAAQR--LLHT--SAGMDPAWDAAIQRAGLLRVQDTHELFSAVETL 280
Cdd:pfam13607 81 RKPVVVLKAGRSEAGARaaASHTgaLAGSDAVYDAAFRQAGVIRVDDLEELFDAAEAL 138
|
|
| CoA_binding_2 |
pfam13380 |
CoA binding domain; This domain has a Rossmann fold and is found in a number of proteins ... |
13-132 |
9.73e-30 |
|
CoA binding domain; This domain has a Rossmann fold and is found in a number of proteins including succinyl CoA synthetases, malate and ATP-citrate ligases.
Pssm-ID: 433162 [Multi-domain] Cd Length: 116 Bit Score: 114.17 E-value: 9.73e-30
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 936194510 13 KSIAVIGASMKPNRAGYLMMRNLLAGGFngPVLPVTPAWKAVLGVLAWPNINSLPFSPDLAVLCTNASRNLALLEALGEK 92
Cdd:pfam13380 1 KTIAVVGASPNPGRPGYKVARYLLEHGY--PVIPVNPKAKEILGEPVYPSLADPPEPVDLVDVFRPPEAVPEIVEEALAL 78
|
90 100 110 120
....*....|....*....|....*....|....*....|
gi 936194510 93 GCKTCIILsaPSAQHAELLACASRYNIRLLGPNSLGLLAP 132
Cdd:pfam13380 79 GAKAVWLQ--PGIENEEAAAIARAAGIRVVGDRCLGVEHP 116
|
|
| RimL |
COG1670 |
Protein N-acetyltransferase, RimJ/RimL family [Translation, ribosomal structure and biogenesis, ... |
722-874 |
1.52e-17 |
|
Protein N-acetyltransferase, RimJ/RimL family [Translation, ribosomal structure and biogenesis, Posttranslational modification, protein turnover, chaperones];
Pssm-ID: 441276 [Multi-domain] Cd Length: 173 Bit Score: 81.20 E-value: 1.52e-17
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 936194510 722 NGERCLFRPILPEDEPHLQQFISQvtKEDLYYRYFSEIN-EFTHEDLANMTQIDYDREMAFVAVRCKDNhEEILGVTRAI 800
Cdd:COG1670 4 ETERLRLRPLRPEDAEALAELLND--PEVARYLPGPPYSlEEARAWLERLLADWADGGALPFAIEDKED-GELIGVVGLY 80
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 936194510 801 S-DPDNVDAEFAVLVRSDLKGLGLGRRLMEKLIAYTRDH-GLIRLNGITMPNNRGMVALARKLGFVVDVQLEEGIV 874
Cdd:COG1670 81 DiDRANRSAEIGYWLAPAYWGKGYATEALRALLDYAFEElGLHRVEAEVDPDNTASIRVLEKLGFRLEGTLRDALV 156
|
|
| MnaT |
COG1247 |
L-amino acid N-acyltransferase MnaT [Amino acid transport and metabolism]; |
728-871 |
4.81e-15 |
|
L-amino acid N-acyltransferase MnaT [Amino acid transport and metabolism];
Pssm-ID: 440860 [Multi-domain] Cd Length: 163 Bit Score: 73.49 E-value: 4.81e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 936194510 728 FRPILPEDEPHLQQFISQVTKEDLYyRYFSEinEFTHEDLAN-MTQIDYDREMAFVAVRckdnHEEILGVTRAIS----D 802
Cdd:COG1247 4 IRPATPEDAPAIAAIYNEAIAEGTA-TFETE--PPSEEEREAwFAAILAPGRPVLVAEE----DGEVVGFASLGPfrprP 76
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 936194510 803 PDNVDAEFAVLVRSDLKGLGLGRRLMEKLIAYTRDHGLIRLNGITMPNNRGMVALARKLGFVVDVQLEE 871
Cdd:COG1247 77 AYRGTAEESIYVDPDARGRGIGRALLEALIERARARGYRRLVAVVLADNEASIALYEKLGFEEVGTLPE 145
|
|
| CoA_binding |
smart00881 |
CoA binding domain; This domain has a Rossmann fold and is found in a number of proteins ... |
9-102 |
4.05e-14 |
|
CoA binding domain; This domain has a Rossmann fold and is found in a number of proteins including succinyl CoA synthetases, malate and ATP-citrate ligases.
Pssm-ID: 214881 [Multi-domain] Cd Length: 100 Bit Score: 68.69 E-value: 4.05e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 936194510 9 LLRP-KSIAVIGASMKPNRAGYLMMRNLLAGG--FNGPVLP--VTPawkAVLGVLAWPNINSLP--FSPDLAVLCTNASR 81
Cdd:smart00881 1 LLNPnTSVAVVGASGNLGSFGLAVMRNLLEYGtkFVGGVYPgkVGP---KVDGVPVYDSVAEAPeeTGVDVAVIFVPAEA 77
|
90 100
....*....|....*....|.
gi 936194510 82 NLALLEALGEKGCKTCIILSA 102
Cdd:smart00881 78 APDAIDEAIEAGIKGIVVITE 98
|
|
| Acetyltransf_1 |
pfam00583 |
Acetyltransferase (GNAT) family; This family contains proteins with N-acetyltransferase ... |
750-863 |
7.94e-11 |
|
Acetyltransferase (GNAT) family; This family contains proteins with N-acetyltransferase functions such as Elp3-related proteins.
Pssm-ID: 395465 [Multi-domain] Cd Length: 116 Bit Score: 60.22 E-value: 7.94e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 936194510 750 DLYYRYFSEinEFTHEDLANMTQIDYDREMAFVAVRckdNHEEILGVTRA--ISDPDNVDAEFAVLVRSDLKGLGLGRRL 827
Cdd:pfam00583 6 ELLSEEFPE--PWPDEPLDLLEDWDEDASEGFFVAE---EDGELVGFASLsiIDDEPPVGEIEGLAVAPEYRGKGIGTAL 80
|
90 100 110
....*....|....*....|....*....|....*.
gi 936194510 828 MEKLIAYTRDHGLIRLNGITMPNNRGMVALARKLGF 863
Cdd:pfam00583 81 LQALLEWARERGCERIFLEVAADNLAAIALYEKLGF 116
|
|
| YccU |
COG1832 |
Predicted CoA-binding protein [General function prediction only]; |
7-96 |
6.17e-10 |
|
Predicted CoA-binding protein [General function prediction only];
Pssm-ID: 441437 [Multi-domain] Cd Length: 138 Bit Score: 58.22 E-value: 6.17e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 936194510 7 EALLRPKSIAVIGASMKPNRAGYLMMRNLLAGGFNgpVLPVTPAWKAVLGVLAWPNINSLPFSPDLAVLCTNASRNLALL 86
Cdd:COG1832 11 EILKSAKTIAVVGLSPNPERPSYYVAKYLQRHGYR--VIPVNPGAKEILGEKVYASLADIPEPVDIVDVFRRSEAVPEIV 88
|
90
....*....|
gi 936194510 87 EALGEKGCKT 96
Cdd:COG1832 89 DEAIAIGAKV 98
|
|
| Acetyltransf_3 |
pfam13302 |
Acetyltransferase (GNAT) domain; This domain catalyzes N-acetyltransferase reactions. |
725-864 |
3.54e-07 |
|
Acetyltransferase (GNAT) domain; This domain catalyzes N-acetyltransferase reactions.
Pssm-ID: 379112 [Multi-domain] Cd Length: 139 Bit Score: 50.42 E-value: 3.54e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 936194510 725 RCLFRPILPEDEPHLQQFISQvtKEDLYYRYFSEIN-EFTHEDLANMTQIDYDREMAFVAVRCKDnhEEILGVTRAIS-D 802
Cdd:pfam13302 1 RLLLRPLTEEDAEALFELLSD--PEVMRYGVPWPLTlEEAREWLARIWAADEAERGYGWAIELKD--TGFIGSIGLYDiD 76
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|...
gi 936194510 803 PDNVDAEFAVLVRSDLKGLGLGRRLMEKLIAYT-RDHGLIRLNGITMPNNRGMVALARKLGFV 864
Cdd:pfam13302 77 GEPERAELGYWLGPDYWGKGYATEAVRALLEYAfEELGLPRLVARIDPENTASRRVLEKLGFK 139
|
|
| RimI |
COG0456 |
Ribosomal protein S18 acetylase RimI and related acetyltransferases [Translation, ribosomal ... |
814-865 |
6.18e-07 |
|
Ribosomal protein S18 acetylase RimI and related acetyltransferases [Translation, ribosomal structure and biogenesis];
Pssm-ID: 440224 [Multi-domain] Cd Length: 92 Bit Score: 48.11 E-value: 6.18e-07
10 20 30 40 50
....*....|....*....|....*....|....*....|....*....|..
gi 936194510 814 VRSDLKGLGLGRRLMEKLIAYTRDHGLIRLNGITMPNNRGMVALARKLGFVV 865
Cdd:COG0456 21 VDPEYRGRGIGRALLEAALERARERGARRLRLEVREDNEAAIALYEKLGFEE 72
|
|
| yhbS |
COG3153 |
Predicted N-acetyltransferase YhbS [General function prediction only]; |
728-865 |
5.06e-06 |
|
Predicted N-acetyltransferase YhbS [General function prediction only];
Pssm-ID: 442387 [Multi-domain] Cd Length: 142 Bit Score: 47.00 E-value: 5.06e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 936194510 728 FRPILPEDEPHLqqfisqvtkEDLYYRYFSEINEfthEDLANMTQIDYDREMAFVAVRckdnHEEILGVTRAISDPDNVD 807
Cdd:COG3153 1 IRPATPEDAEAI---------AALLRAAFGPGRE---AELVDRLREDPAAGLSLVAED----DGEIVGHVALSPVDIDGE 64
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|....
gi 936194510 808 AEFAVL----VRSDLKGLGLGRRLMEKLIAYTRDHG--LIRLNGitmpnNRGMVALARKLGFVV 865
Cdd:COG3153 65 GPALLLgplaVDPEYRGQGIGRALMRAALEAARERGarAVVLLG-----DPSLLPFYERFGFRP 123
|
|
| PhnO |
COG0454 |
N-acetyltransferase, GNAT superfamily (includes histone acetyltransferase HPA2) [Transcription, ... |
761-865 |
1.04e-05 |
|
N-acetyltransferase, GNAT superfamily (includes histone acetyltransferase HPA2) [Transcription, General function prediction only];
Pssm-ID: 440222 [Multi-domain] Cd Length: 136 Bit Score: 45.81 E-value: 1.04e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 936194510 761 EFTHEDLANMTQIDYDREmaFVAVRCKDnheEILGVTRAISDPDNVdAEFAVL-VRSDLKGLGLGRRLMEKLIAYTRDHG 839
Cdd:COG0454 18 EALDAELKAMEGSLAGAE--FIAVDDKG---EPIGFAGLRRLDDKV-LELKRLyVLPEYRGKGIGKALLEALLEWARERG 91
|
90 100
....*....|....*....|....*...
gi 936194510 840 L--IRLNgiTMPNNRGMVALARKLGFVV 865
Cdd:COG0454 92 CtaLELD--TLDGNPAAIRFYERLGFKE 117
|
|
| COG3393 |
COG3393 |
Predicted acetyltransferase, GNAT family [General function prediction only]; |
792-864 |
2.14e-05 |
|
Predicted acetyltransferase, GNAT family [General function prediction only];
Pssm-ID: 442620 [Multi-domain] Cd Length: 86 Bit Score: 43.74 E-value: 2.14e-05
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 936194510 792 EILGVTRAISDPDNVDAEFAVLVRSDLKGLGLGRRLMEKLIAYTRDHGLIRLNGITMPNNRGMVALARKLGFV 864
Cdd:COG3393 1 ELVAMAGVRAESPGVAEISGVYTHPEYRGRGLASALVAALAREALARGARTPFLYVDADNPAARRLYERLGFR 73
|
|
| SucD |
COG0074 |
Succinyl-CoA synthetase, alpha subunit [Energy production and conversion]; Succinyl-CoA ... |
84-280 |
6.72e-05 |
|
Succinyl-CoA synthetase, alpha subunit [Energy production and conversion]; Succinyl-CoA synthetase, alpha subunit is part of the Pathway/BioSystem: TCA cycle
Pssm-ID: 439844 [Multi-domain] Cd Length: 288 Bit Score: 45.82 E-value: 6.72e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 936194510 84 ALLEALgEKGCKTCIILSA--PSAQHAELLACASRYNIRLLGPNSLGLLAPWQgLNASFSPVPI-KRGKLAFISQSAAVS 160
Cdd:COG0074 80 AILEAI-DAGIKLIVCITEgiPVLDMVRVKRYAKAKGTRLIGPNCPGIITPGE-CKLGIMPGHIfKPGRVGIVSRSGTLT 157
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 936194510 161 NTILDWAQQREMGFSYFIALG-DSL-DIDVDELLDYLARDSKTSAILLYLEHLSDARrfVSAAR--SASRNKPILVIKSG 236
Cdd:COG0074 158 YEAVWQLTQAGLGQSTCVGIGgDPIiGTSFIDVLELFEEDPETEAIVMIGEIGGSAE--EEAAEyiKENMTKPVVAYIAG 235
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|.
gi 936194510 237 RS-PAAQRLLHTSA----GMDPAWD--AAIQRAGLLRVQDTHELFSAVETL 280
Cdd:COG0074 236 RTaPPGKRMGHAGAiisgGKGTAESkiEALEAAGVPVAESPSEIGELLKKA 286
|
|
| ElaA |
COG2153 |
Predicted N-acyltransferase, GNAT family [General function prediction only]; |
789-873 |
8.24e-05 |
|
Predicted N-acyltransferase, GNAT family [General function prediction only];
Pssm-ID: 441756 [Multi-domain] Cd Length: 134 Bit Score: 43.25 E-value: 8.24e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 936194510 789 NHEEILGVTRaISDPDNVDAEFA-VLVRSDLKGLGLGRRLMEKLIAYTRDHGL--IRLNGITmpnnrGMVALARKLGFVV 865
Cdd:COG2153 41 DDGELVATAR-LLPPGDGEAKIGrVAVLPEYRGQGLGRALMEAAIEEARERGArrIVLSAQA-----HAVGFYEKLGFVP 114
|
90
....*....|
gi 936194510 866 --DVQLEEGI 873
Cdd:COG2153 115 vgEEFLEAGI 124
|
|
| Acetyltransf_7 |
pfam13508 |
Acetyltransferase (GNAT) domain; This domain catalyzes N-acetyltransferase reactions. |
776-865 |
2.98e-04 |
|
Acetyltransferase (GNAT) domain; This domain catalyzes N-acetyltransferase reactions.
Pssm-ID: 463905 [Multi-domain] Cd Length: 84 Bit Score: 40.52 E-value: 2.98e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 936194510 776 DREMAFVAvrckDNHEEILGVTRAISDPDNVD-AEFAVLVRSDLKGLGLGRRLMEKLIAYTRDHGLIRlngITMPNNRGM 854
Cdd:pfam13508 1 PGGRFFVA----EDDGKIVGFAALLPLDDEGAlAELRLAVHPEYRGQGIGRALLEAAEAAAKEGGIKL---LELETTNRA 73
|
90
....*....|.
gi 936194510 855 VALARKLGFVV 865
Cdd:pfam13508 74 AAFYEKLGFEE 84
|
|
| ArgA |
COG1246 |
N-acetylglutamate synthase or related acetyltransferase, GNAT family [Amino acid transport and ... |
728-865 |
3.66e-04 |
|
N-acetylglutamate synthase or related acetyltransferase, GNAT family [Amino acid transport and metabolism]; N-acetylglutamate synthase or related acetyltransferase, GNAT family is part of the Pathway/BioSystem: Arginine biosynthesis
Pssm-ID: 440859 [Multi-domain] Cd Length: 132 Bit Score: 41.52 E-value: 3.66e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 936194510 728 FRPILPEDEPHLQQFISQvtkedlyYRYFSEINEFthedlanmtqidydremaFVAVRckdnHEEILGVTRAISDPDNVd 807
Cdd:COG1246 3 IRPATPDDVPAILELIRP-------YALEEEIGEF------------------WVAEE----DGEIVGCAALHPLDEDL- 52
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|....*....
gi 936194510 808 AEFA-VLVRSDLKGLGLGRRLMEKLIAYTRDHGLIRLNGITmpnNRGMVALARKLGFVV 865
Cdd:COG1246 53 AELRsLAVHPDYRGRGIGRRLLEALLAEARELGLKRLFLLT---TSAAIHFYEKLGFEE 108
|
|
|