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Conserved domains on  [gi|937115145|ref|WP_054552908|]
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MULTISPECIES: PepSY domain-containing protein [Pseudoalteromonas]

Protein Classification

PepSY domain-containing protein( domain architecture ID 10506274)

PepSY domain-containing protein may act as a regulator of peptidase activity and may also function in protecting the cell from lysis

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
PepSY pfam03413
Peptidase propeptide and YPEB domain; This region is likely to have an protease inhibitory ...
 30-83 1.80e-03

Peptidase propeptide and YPEB domain; This region is likely to have an protease inhibitory function (personal obs:C Yeats). This model is likely to miss some members of this family as the separation from signal to noise is not clear. The name is derived from Peptidase _ Bacillus subtilis YPEB.


:

Pssm-ID: 427284 [Multi-domain]  Cd Length: 59  Bit Score: 33.42  E-value: 1.80e-03
                         10        20        30        40        50
                 ....*....|....*....|....*....|....*....|....*....|....*...
gi 937115145  30 VTKKQAVTIAKKSEDGRTLKITEQDK----VFTVRILKtNGHVVDVHVNKKTGEVKKD 83
Cdd:pfam03413  2 ISLEQALAIALKAVPGAVIEAELEPEdgklVYEVEVDP-DGREYEVYIDAYTGEVLKV 58
 
Name Accession Description Interval E-value
PepSY pfam03413
Peptidase propeptide and YPEB domain; This region is likely to have an protease inhibitory ...
 30-83 1.80e-03

Peptidase propeptide and YPEB domain; This region is likely to have an protease inhibitory function (personal obs:C Yeats). This model is likely to miss some members of this family as the separation from signal to noise is not clear. The name is derived from Peptidase _ Bacillus subtilis YPEB.


Pssm-ID: 427284 [Multi-domain]  Cd Length: 59  Bit Score: 33.42  E-value: 1.80e-03
                         10        20        30        40        50
                 ....*....|....*....|....*....|....*....|....*....|....*...
gi 937115145  30 VTKKQAVTIAKKSEDGRTLKITEQDK----VFTVRILKtNGHVVDVHVNKKTGEVKKD 83
Cdd:pfam03413  2 ISLEQALAIALKAVPGAVIEAELEPEdgklVYEVEVDP-DGREYEVYIDAYTGEVLKV 58
 
Name Accession Description Interval E-value
PepSY pfam03413
Peptidase propeptide and YPEB domain; This region is likely to have an protease inhibitory ...
 30-83 1.80e-03

Peptidase propeptide and YPEB domain; This region is likely to have an protease inhibitory function (personal obs:C Yeats). This model is likely to miss some members of this family as the separation from signal to noise is not clear. The name is derived from Peptidase _ Bacillus subtilis YPEB.


Pssm-ID: 427284 [Multi-domain]  Cd Length: 59  Bit Score: 33.42  E-value: 1.80e-03
                         10        20        30        40        50
                 ....*....|....*....|....*....|....*....|....*....|....*...
gi 937115145  30 VTKKQAVTIAKKSEDGRTLKITEQDK----VFTVRILKtNGHVVDVHVNKKTGEVKKD 83
Cdd:pfam03413  2 ISLEQALAIALKAVPGAVIEAELEPEdgklVYEVEVDP-DGREYEVYIDAYTGEVLKV 58
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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