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Conserved domains on  [gi|937117465|ref|WP_054554810|]
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MULTISPECIES: F0F1 ATP synthase subunit gamma [Pseudoalteromonas]

Protein Classification

FoF1 ATP synthase subunit gamma( domain architecture ID 10792582)

FoF1 ATP synthase subunit gamma is part of the catalytic core of the F-type ATPase that produces ATP from ADP in the presence of a proton gradient across the membrane

EC:  7.1.2.2
Gene Ontology:  GO:0045261|GO:0005524|GO:0046933|GO:0042777
PubMed:  25730883|30888962|25667968|18216260|8951091
SCOP:  4000503

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
PRK05621 PRK05621
F0F1 ATP synthase subunit gamma; Validated
 1-286 6.43e-169

F0F1 ATP synthase subunit gamma; Validated


:

Pssm-ID: 235535  Cd Length: 284  Bit Score: 468.82  E-value: 6.43e-169
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 937117465   1 MASGKEIKSKIGSIKNTQKITSAMEMVAASKMKKAQERVASSRPYAENLRQVIGRVAQANlDFTHPFLEEREVKRVGYIV 80
Cdd:PRK05621   1 MASLKEIRRRIKSVKNTQKITKAMEMVAASKLRKAQERAEASRPYAEKIRKVISHLASAS-EYDHPLLVEREVKRVGYIV 79

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 937117465  81 ISTDRGLCGGLNSNEFKKVALDVKAWKEKGVEAEFTTLGSKAAGFFQRFGGKLVAKKANLGDTPSLQDVIGPVKTMLDAY 160
Cdd:PRK05621  80 VTSDRGLCGGYNSNIIKKVLELIKELEAQGKEVKLIVIGRKGVDFFKRRGINVVAEYTGLGDQPTFEEAIGIAKKLLDAY 159

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 937117465 161 SEGKIDRLYVVFNKFVNTMKQEPTIDQLLPLPKaEEEVSQHSWDYLYEPNPEAILEALLVRFIESQVYQGVVENAASEQA 240
Cdd:PRK05621 160 DNGEFDELYIVYNKFVNTLSQEPTVEQLLPLEK-EEEEEETSWDYEYEPDAEEILDALLPRYVESQIYQALLENKASEQA 238

                        250       260       270       280
                 ....*....|....*....|....*....|....*....|....*.
gi 937117465 241 ARMVAMKAATDNAGDLMDELQLVYNKARQAAITQEISEIVGGSAAV 286
Cdd:PRK05621 239 ARMTAMKNATDNAGDLIKKLTLVYNRARQAAITQEITEIVGGAEAL 284
 
Name Accession Description Interval E-value
PRK05621 PRK05621
F0F1 ATP synthase subunit gamma; Validated
 1-286 6.43e-169

F0F1 ATP synthase subunit gamma; Validated


Pssm-ID: 235535  Cd Length: 284  Bit Score: 468.82  E-value: 6.43e-169
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 937117465   1 MASGKEIKSKIGSIKNTQKITSAMEMVAASKMKKAQERVASSRPYAENLRQVIGRVAQANlDFTHPFLEEREVKRVGYIV 80
Cdd:PRK05621   1 MASLKEIRRRIKSVKNTQKITKAMEMVAASKLRKAQERAEASRPYAEKIRKVISHLASAS-EYDHPLLVEREVKRVGYIV 79

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 937117465  81 ISTDRGLCGGLNSNEFKKVALDVKAWKEKGVEAEFTTLGSKAAGFFQRFGGKLVAKKANLGDTPSLQDVIGPVKTMLDAY 160
Cdd:PRK05621  80 VTSDRGLCGGYNSNIIKKVLELIKELEAQGKEVKLIVIGRKGVDFFKRRGINVVAEYTGLGDQPTFEEAIGIAKKLLDAY 159

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 937117465 161 SEGKIDRLYVVFNKFVNTMKQEPTIDQLLPLPKaEEEVSQHSWDYLYEPNPEAILEALLVRFIESQVYQGVVENAASEQA 240
Cdd:PRK05621 160 DNGEFDELYIVYNKFVNTLSQEPTVEQLLPLEK-EEEEEETSWDYEYEPDAEEILDALLPRYVESQIYQALLENKASEQA 238

                        250       260       270       280
                 ....*....|....*....|....*....|....*....|....*.
gi 937117465 241 ARMVAMKAATDNAGDLMDELQLVYNKARQAAITQEISEIVGGSAAV 286
Cdd:PRK05621 239 ARMTAMKNATDNAGDLIKKLTLVYNRARQAAITQEITEIVGGAEAL 284
AtpG COG0224
FoF1-type ATP synthase, gamma subunit [Energy production and conversion]; FoF1-type ATP ...
 1-286 3.14e-160

FoF1-type ATP synthase, gamma subunit [Energy production and conversion]; FoF1-type ATP synthase, gamma subunit is part of the Pathway/BioSystem: FoF1-type ATP synthase


Pssm-ID: 439994  Cd Length: 288  Bit Score: 446.90  E-value: 3.14e-160
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 937117465   1 MASGKEIKSKIGSIKNTQKITSAMEMVAASKMKKAQERVASSRPYAENLRQVIGRVAQANLDFTHPFLEEREVKRVGYIV 80
Cdd:COG0224    1 MASLKEIRRRIKSVKSTQKITKAMKMVAASKLRKAQERAEAARPYAEKLREVLAALAAASPEYDHPLLEEREVKRVGLIV 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 937117465  81 ISTDRGLCGGLNSNEFKKVALDVKAWKEKGVEAEFTTLGSKAAGFFQRFGGKLVAKKANLGDTPSLQDVIGPVKTMLDAY 160
Cdd:COG0224   81 ITSDRGLCGGFNSNVLKAAEELIKELQAEGKEVELIVVGRKGRDFFKRRGINVVAEFTGLSDKPSFEDAKEIAEELLDAF 160

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 937117465 161 SEGKIDRLYVVFNKFVNTMKQEPTIDQLLPLPKAE--EEVSQHSWDYLYEPNPEAILEALLVRFIESQVYQGVVENAASE 238
Cdd:COG0224  161 LAGEIDEVYLVYNRFVSAITQEPVVEQLLPLDPEEleEAEWETRADYIFEPSPEEILDALLPRYLESQIYQALLESAASE 240

                        250       260       270       280
                 ....*....|....*....|....*....|....*....|....*...
gi 937117465 239 QAARMVAMKAATDNAGDLMDELQLVYNKARQAAITQEISEIVGGSAAV 286
Cdd:COG0224  241 HAARMTAMKNATDNAGELIDDLTLEYNRARQAAITQELSEIVGGAEAL 288
ATP-synt pfam00231
ATP synthase;
3-285 1.70e-143

ATP synthase;


Pssm-ID: 459722  Cd Length: 285  Bit Score: 404.60  E-value: 1.70e-143
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 937117465    3 SGKEIKSKIGSIKNTQKITSAMEMVAASKMKKAQERVASSRPYAENLRQVIGRVAQANLDFTHPFLEEREVKRVGYIVIS 82
Cdd:pfam00231   1 SLKEIKRRIKSVKSTQKITKAMKMVAAAKLRKAQEALEAARPYAEKLQEVLADLAAASPEDSHPLLERREVKKVGLIVIT 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 937117465   83 TDRGLCGGLNSNEFKKVALDVKAWKEKGVEAEFTTLGSKAAGFFQRFGGKLVAK-KANLGDTPSLQDVIGPVKTMLDAYS 161
Cdd:pfam00231  81 SDRGLCGGFNSNVIKAARALIEELLAEGKEVKLIVVGRKGRDYFKKRGYEVILEfTGSLGDKPTFEEAAEIADELLDAFL 160

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 937117465  162 EGKIDRLYVVFNKFVNTMKQEPTIDQLLPL-PKAEEEVSQHSWDYLYEPNPEAILEALLVRFIESQVYQGVVENAASEQA 240
Cdd:pfam00231 161 AGEIDEVYLVYNRFVSAISQEPTVEQLLPLdPEEEEEEEESLADYEFEPSAEEVLDALLPRYLESQIYGALLESAASEQA 240

                         250       260       270       280
                  ....*....|....*....|....*....|....*....|....*
gi 937117465  241 ARMVAMKAATDNAGDLMDELQLVYNKARQAAITQEISEIVGGSAA 285
Cdd:pfam00231 241 ARMTAMDNATDNAGELIDKLTLQYNRARQAAITQELIEIVSGAEA 285
ATPsyn_F1gamma TIGR01146
ATP synthase, F1 gamma subunit; This model describes the ATP synthase gamma subunit in ...
 2-286 1.43e-133

ATP synthase, F1 gamma subunit; This model describes the ATP synthase gamma subunit in bacteria and its equivalents in organelles, namely, mitochondria and chloroplast. F1/F0-ATP synthase is a multisubunit, membrane associated enzyme found in bacteria and organelles of higher eukaryotes, namely, mitochondria and chloroplast. This enzyme is principally involed in the synthesis of ATP from ADP and inorganic phosphate by coupling the energy derived from the proton electrochemical gradient across the biological membrane. A brief description of this multisubunit enzyme complex: F1 and F0 represent two major clusters of subunits. The gamma subunit is the part of F1 cluster. Surrounding the gamma subunit in a cylinder-like structure are three alpha and three subunits in an alternating fashion. This is the central catalytic unit whose different conformations permit the binding of ADP and inorganic phosphate and release of ATP. [Energy metabolism, ATP-proton motive force interconversion]


Pssm-ID: 273469  Cd Length: 286  Bit Score: 379.33  E-value: 1.43e-133
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 937117465    2 ASGKEIKSKIGSIKNTQKITSAMEMVAASKMKKAQERVASSRPYAENLRQVIGRVAQANLDFTHPFLEEREVKRVGYIVI 81
Cdd:TIGR01146   1 ATLKEIRTRIKSVKNTQKITKAMKMVAASKLRRAQERAEAARPYAEKIRAVLGNLATKLLNVDHPLLKSREVKKVGILVI 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 937117465   82 STDRGLCGGLNSNEFKKVALDVKAWKEKGVEAEFTTLGSKAAGFFQRFGGKLVAKKANLGDTPSLQDVIGPVKTMLDAYS 161
Cdd:TIGR01146  81 TSDRGLCGGYNSNVLKRVRARAKELKAAGKEVKLVVIGRKGKSFFKRRGDNIVLSITGLSDQPTFEEASGIADKLLDAFD 160

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 937117465  162 EGKIDRLYVVFNKFVNTMKQEPTIDQLLPLP-KAEEEVSQHSWDYLYEPNPEAILEALLVRFIESQVYQGVVENAASEQA 240
Cdd:TIGR01146 161 AGEFDELYIVYNKFVSSISQEPTVKQLLPLSaQGPDEGFKFSQDYIFEPDEEEILDDLLPRYLESQIYGALLESAASEQA 240

                         250       260       270       280
                  ....*....|....*....|....*....|....*....|....*.
gi 937117465  241 ARMVAMKAATDNAGDLMDELQLVYNKARQAAITQEISEIVGGSAAV 286
Cdd:TIGR01146 241 ARMTAMDNATDNAGDLIKKLTLSYNRARQAAITQELIEIVAGASAL 286
F1-ATPase_gamma cd12151
mitochondrial ATP synthase gamma subunit; The F-ATPase is found in bacterial plasma membranes, ...
 2-283 2.33e-123

mitochondrial ATP synthase gamma subunit; The F-ATPase is found in bacterial plasma membranes, mitochondrial inner membranes and in chloroplast thylakoid membranes. It has also been found in the archaea Methanosarcina barkeri. It uses a proton gradient to drive ATP synthesis and hydrolyzes ATP to build the proton gradient. The extrinisic membrane domain of F-ATPases is composed of alpha, beta, gamma, delta, and epsilon (not present in bacteria) subunits with a stoichiometry of 3:3:1:1:1. Alpha and beta subunit form the globular catalytic moiety, a hexameric ring of alternating subunits. Gamma, delta and epsilon subunits form a stalk, connecting F1 to F0, the integral membrane proton translocating domain.


Pssm-ID: 213394  Cd Length: 282  Bit Score: 353.42  E-value: 2.33e-123
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 937117465   2 ASGKEIKSKIGSIKNTQKITSAMEMVAASKMKKAQERVASSRPYAENLRQVIGRVAQANLDFTHPFLEEREVKRVGYIVI 81
Cdd:cd12151    1 ASLKEIKRRIKSVKNTQKITKAMKMVAAAKLRKAQRALEAARPYAEKLEEVLQRLLSSLDDEDPPLLEKREVKKVLLIVI 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 937117465  82 STDRGLCGGLNSNEFKKVALDVKawKEKGVEAEFTTLGSKAAGFFQRFGGKLVAKKANLGDTPSLQDVIGPVKTMLDAYS 161
Cdd:cd12151   81 TSDRGLCGGFNSNIIKAAEELIK--EADGKEVKLIVVGKKGRDYLKRRGYNIALPFSDIGDDPTYFEAASIIEELILDFL 158

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 937117465 162 EGKIDRLYVVFNKFVNTMKQEPTIDQLLPL--PKAEEEVSQHSWDYLYEPNPEAILEALLVRFIESQVYQGVVENAASEQ 239
Cdd:cd12151  159 NGEIDEVYIIYNKFKSAISQEPVVEQLLPLdkEEEEEESEGSRSDYIFEPDPEEVLDALLPFYLASLLYRALLESLASEQ 238

                        250       260       270       280
                 ....*....|....*....|....*....|....*....|....
gi 937117465 240 AARMVAMKAATDNAGDLMDELQLVYNKARQAAITQEISEIVGGS 283
Cdd:cd12151  239 AARMTAMDNATDNAGELIDKLTLEYNRARQAAITQELIEIVSGA 282
 
Name Accession Description Interval E-value
PRK05621 PRK05621
F0F1 ATP synthase subunit gamma; Validated
 1-286 6.43e-169

F0F1 ATP synthase subunit gamma; Validated


Pssm-ID: 235535  Cd Length: 284  Bit Score: 468.82  E-value: 6.43e-169
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 937117465   1 MASGKEIKSKIGSIKNTQKITSAMEMVAASKMKKAQERVASSRPYAENLRQVIGRVAQANlDFTHPFLEEREVKRVGYIV 80
Cdd:PRK05621   1 MASLKEIRRRIKSVKNTQKITKAMEMVAASKLRKAQERAEASRPYAEKIRKVISHLASAS-EYDHPLLVEREVKRVGYIV 79

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 937117465  81 ISTDRGLCGGLNSNEFKKVALDVKAWKEKGVEAEFTTLGSKAAGFFQRFGGKLVAKKANLGDTPSLQDVIGPVKTMLDAY 160
Cdd:PRK05621  80 VTSDRGLCGGYNSNIIKKVLELIKELEAQGKEVKLIVIGRKGVDFFKRRGINVVAEYTGLGDQPTFEEAIGIAKKLLDAY 159

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 937117465 161 SEGKIDRLYVVFNKFVNTMKQEPTIDQLLPLPKaEEEVSQHSWDYLYEPNPEAILEALLVRFIESQVYQGVVENAASEQA 240
Cdd:PRK05621 160 DNGEFDELYIVYNKFVNTLSQEPTVEQLLPLEK-EEEEEETSWDYEYEPDAEEILDALLPRYVESQIYQALLENKASEQA 238

                        250       260       270       280
                 ....*....|....*....|....*....|....*....|....*.
gi 937117465 241 ARMVAMKAATDNAGDLMDELQLVYNKARQAAITQEISEIVGGSAAV 286
Cdd:PRK05621 239 ARMTAMKNATDNAGDLIKKLTLVYNRARQAAITQEITEIVGGAEAL 284
AtpG COG0224
FoF1-type ATP synthase, gamma subunit [Energy production and conversion]; FoF1-type ATP ...
 1-286 3.14e-160

FoF1-type ATP synthase, gamma subunit [Energy production and conversion]; FoF1-type ATP synthase, gamma subunit is part of the Pathway/BioSystem: FoF1-type ATP synthase


Pssm-ID: 439994  Cd Length: 288  Bit Score: 446.90  E-value: 3.14e-160
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 937117465   1 MASGKEIKSKIGSIKNTQKITSAMEMVAASKMKKAQERVASSRPYAENLRQVIGRVAQANLDFTHPFLEEREVKRVGYIV 80
Cdd:COG0224    1 MASLKEIRRRIKSVKSTQKITKAMKMVAASKLRKAQERAEAARPYAEKLREVLAALAAASPEYDHPLLEEREVKRVGLIV 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 937117465  81 ISTDRGLCGGLNSNEFKKVALDVKAWKEKGVEAEFTTLGSKAAGFFQRFGGKLVAKKANLGDTPSLQDVIGPVKTMLDAY 160
Cdd:COG0224   81 ITSDRGLCGGFNSNVLKAAEELIKELQAEGKEVELIVVGRKGRDFFKRRGINVVAEFTGLSDKPSFEDAKEIAEELLDAF 160

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 937117465 161 SEGKIDRLYVVFNKFVNTMKQEPTIDQLLPLPKAE--EEVSQHSWDYLYEPNPEAILEALLVRFIESQVYQGVVENAASE 238
Cdd:COG0224  161 LAGEIDEVYLVYNRFVSAITQEPVVEQLLPLDPEEleEAEWETRADYIFEPSPEEILDALLPRYLESQIYQALLESAASE 240

                        250       260       270       280
                 ....*....|....*....|....*....|....*....|....*...
gi 937117465 239 QAARMVAMKAATDNAGDLMDELQLVYNKARQAAITQEISEIVGGSAAV 286
Cdd:COG0224  241 HAARMTAMKNATDNAGELIDDLTLEYNRARQAAITQELSEIVGGAEAL 288
ATP-synt pfam00231
ATP synthase;
3-285 1.70e-143

ATP synthase;


Pssm-ID: 459722  Cd Length: 285  Bit Score: 404.60  E-value: 1.70e-143
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 937117465    3 SGKEIKSKIGSIKNTQKITSAMEMVAASKMKKAQERVASSRPYAENLRQVIGRVAQANLDFTHPFLEEREVKRVGYIVIS 82
Cdd:pfam00231   1 SLKEIKRRIKSVKSTQKITKAMKMVAAAKLRKAQEALEAARPYAEKLQEVLADLAAASPEDSHPLLERREVKKVGLIVIT 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 937117465   83 TDRGLCGGLNSNEFKKVALDVKAWKEKGVEAEFTTLGSKAAGFFQRFGGKLVAK-KANLGDTPSLQDVIGPVKTMLDAYS 161
Cdd:pfam00231  81 SDRGLCGGFNSNVIKAARALIEELLAEGKEVKLIVVGRKGRDYFKKRGYEVILEfTGSLGDKPTFEEAAEIADELLDAFL 160

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 937117465  162 EGKIDRLYVVFNKFVNTMKQEPTIDQLLPL-PKAEEEVSQHSWDYLYEPNPEAILEALLVRFIESQVYQGVVENAASEQA 240
Cdd:pfam00231 161 AGEIDEVYLVYNRFVSAISQEPTVEQLLPLdPEEEEEEEESLADYEFEPSAEEVLDALLPRYLESQIYGALLESAASEQA 240

                         250       260       270       280
                  ....*....|....*....|....*....|....*....|....*
gi 937117465  241 ARMVAMKAATDNAGDLMDELQLVYNKARQAAITQEISEIVGGSAA 285
Cdd:pfam00231 241 ARMTAMDNATDNAGELIDKLTLQYNRARQAAITQELIEIVSGAEA 285
ATPsyn_F1gamma TIGR01146
ATP synthase, F1 gamma subunit; This model describes the ATP synthase gamma subunit in ...
 2-286 1.43e-133

ATP synthase, F1 gamma subunit; This model describes the ATP synthase gamma subunit in bacteria and its equivalents in organelles, namely, mitochondria and chloroplast. F1/F0-ATP synthase is a multisubunit, membrane associated enzyme found in bacteria and organelles of higher eukaryotes, namely, mitochondria and chloroplast. This enzyme is principally involed in the synthesis of ATP from ADP and inorganic phosphate by coupling the energy derived from the proton electrochemical gradient across the biological membrane. A brief description of this multisubunit enzyme complex: F1 and F0 represent two major clusters of subunits. The gamma subunit is the part of F1 cluster. Surrounding the gamma subunit in a cylinder-like structure are three alpha and three subunits in an alternating fashion. This is the central catalytic unit whose different conformations permit the binding of ADP and inorganic phosphate and release of ATP. [Energy metabolism, ATP-proton motive force interconversion]


Pssm-ID: 273469  Cd Length: 286  Bit Score: 379.33  E-value: 1.43e-133
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 937117465    2 ASGKEIKSKIGSIKNTQKITSAMEMVAASKMKKAQERVASSRPYAENLRQVIGRVAQANLDFTHPFLEEREVKRVGYIVI 81
Cdd:TIGR01146   1 ATLKEIRTRIKSVKNTQKITKAMKMVAASKLRRAQERAEAARPYAEKIRAVLGNLATKLLNVDHPLLKSREVKKVGILVI 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 937117465   82 STDRGLCGGLNSNEFKKVALDVKAWKEKGVEAEFTTLGSKAAGFFQRFGGKLVAKKANLGDTPSLQDVIGPVKTMLDAYS 161
Cdd:TIGR01146  81 TSDRGLCGGYNSNVLKRVRARAKELKAAGKEVKLVVIGRKGKSFFKRRGDNIVLSITGLSDQPTFEEASGIADKLLDAFD 160

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 937117465  162 EGKIDRLYVVFNKFVNTMKQEPTIDQLLPLP-KAEEEVSQHSWDYLYEPNPEAILEALLVRFIESQVYQGVVENAASEQA 240
Cdd:TIGR01146 161 AGEFDELYIVYNKFVSSISQEPTVKQLLPLSaQGPDEGFKFSQDYIFEPDEEEILDDLLPRYLESQIYGALLESAASEQA 240

                         250       260       270       280
                  ....*....|....*....|....*....|....*....|....*.
gi 937117465  241 ARMVAMKAATDNAGDLMDELQLVYNKARQAAITQEISEIVGGSAAV 286
Cdd:TIGR01146 241 ARMTAMDNATDNAGDLIKKLTLSYNRARQAAITQELIEIVAGASAL 286
F1-ATPase_gamma cd12151
mitochondrial ATP synthase gamma subunit; The F-ATPase is found in bacterial plasma membranes, ...
 2-283 2.33e-123

mitochondrial ATP synthase gamma subunit; The F-ATPase is found in bacterial plasma membranes, mitochondrial inner membranes and in chloroplast thylakoid membranes. It has also been found in the archaea Methanosarcina barkeri. It uses a proton gradient to drive ATP synthesis and hydrolyzes ATP to build the proton gradient. The extrinisic membrane domain of F-ATPases is composed of alpha, beta, gamma, delta, and epsilon (not present in bacteria) subunits with a stoichiometry of 3:3:1:1:1. Alpha and beta subunit form the globular catalytic moiety, a hexameric ring of alternating subunits. Gamma, delta and epsilon subunits form a stalk, connecting F1 to F0, the integral membrane proton translocating domain.


Pssm-ID: 213394  Cd Length: 282  Bit Score: 353.42  E-value: 2.33e-123
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 937117465   2 ASGKEIKSKIGSIKNTQKITSAMEMVAASKMKKAQERVASSRPYAENLRQVIGRVAQANLDFTHPFLEEREVKRVGYIVI 81
Cdd:cd12151    1 ASLKEIKRRIKSVKNTQKITKAMKMVAAAKLRKAQRALEAARPYAEKLEEVLQRLLSSLDDEDPPLLEKREVKKVLLIVI 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 937117465  82 STDRGLCGGLNSNEFKKVALDVKawKEKGVEAEFTTLGSKAAGFFQRFGGKLVAKKANLGDTPSLQDVIGPVKTMLDAYS 161
Cdd:cd12151   81 TSDRGLCGGFNSNIIKAAEELIK--EADGKEVKLIVVGKKGRDYLKRRGYNIALPFSDIGDDPTYFEAASIIEELILDFL 158

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 937117465 162 EGKIDRLYVVFNKFVNTMKQEPTIDQLLPL--PKAEEEVSQHSWDYLYEPNPEAILEALLVRFIESQVYQGVVENAASEQ 239
Cdd:cd12151  159 NGEIDEVYIIYNKFKSAISQEPVVEQLLPLdkEEEEEESEGSRSDYIFEPDPEEVLDALLPFYLASLLYRALLESLASEQ 238

                        250       260       270       280
                 ....*....|....*....|....*....|....*....|....
gi 937117465 240 AARMVAMKAATDNAGDLMDELQLVYNKARQAAITQEISEIVGGS 283
Cdd:cd12151  239 AARMTAMDNATDNAGELIDKLTLEYNRARQAAITQELIEIVSGA 282
PRK14111 PRK14111
F0F1 ATP synthase subunit gamma; Provisional
 1-286 6.30e-102

F0F1 ATP synthase subunit gamma; Provisional


Pssm-ID: 184515  Cd Length: 290  Bit Score: 299.40  E-value: 6.30e-102
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 937117465   1 MASGKEIKSKIGSIKNTQKITSAMEMVAASKMKKAQERVASSRPYAENLRQVIGRVAQANL--DFTHPFLEERE-VKRVG 77
Cdd:PRK14111   1 MPSTREIRRRIRSVKNTAQITRAMEMVSASKMRRAQRNVLATRPYADRIRDVMGDLTARTVgaARVGPLLEKRPtVKRVA 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 937117465  78 YIVISTDRGLCGGLNSNEFKKVALDVKAWKEKGVEAEFTTLGSKAAGFFQRFGGKLVAKKANLGDTPSLQDVIGPVKTML 157
Cdd:PRK14111  81 LILVTPDRGLAGSLNANVLRRAIRFITDERSMGRTVDVIAIGRKGRDFMVRTGQALVAEFTRLGDAPKLEAILPVATSAI 160

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 937117465 158 DAYSEGKIDRLYVVFNKFVNTMKQEPTIDQLLPLPKAEEEVSQHSwDYLYEPNPEAILEALLVRFIESQVYQGVVENAAS 237
Cdd:PRK14111 161 NGFQSGKYDEVYVLYSEFINTLVQRPTIKQLLPIEPPEISTTTVV-DYTYEPSPEEVLRALLPRFVEVQLYQAVLESIAS 239

                        250       260       270       280
                 ....*....|....*....|....*....|....*....|....*....
gi 937117465 238 EQAARMVAMKAATDNAGDLMDELQLVYNKARQAAITQEISEIVGGSAAV 286
Cdd:PRK14111 240 EHSARMVAMRNATDNAKELVRDLTLTYNKARQAAITKEVSEIASGAAAL 288
PRK13423 PRK13423
F0F1 ATP synthase subunit gamma; Provisional
 1-286 2.97e-96

F0F1 ATP synthase subunit gamma; Provisional


Pssm-ID: 237384  Cd Length: 288  Bit Score: 285.03  E-value: 2.97e-96
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 937117465   1 MASGKEIKSKIGSIKNTQKITSAMEMVAASKMKKAQERVASSRPYAENLRQVIGRVAQANLDFTHPFLEEREVKRVGYIV 80
Cdd:PRK13423   1 MASLKDIKKRIVSVKNTRQITKAMKMVSAAKLRRAQENVVAARPYAAKLGEVLGSLAARAGEDAHPLLVPREVKKALLVV 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 937117465  81 ISTDRGLCGGLNSNEFKKVALDVKAWKEKGVEAEFTTLGSKAAGFFQRFGGKLVAKKANLGDTPSLQDVIGPVKTMLDAY 160
Cdd:PRK13423  81 VTSDRGLCGGFNSNLCKAAERFLKENKDEFEEISLTTVGRKGREFLKNRGLIIRKNYGGVVANLTYETAALLAQELIEGY 160

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 937117465 161 SEGKIDRLYVVFNKFVNTMKQEPTIDQLLPLPKAEEEVSQHSWDYLYEPNPEAILEALLVRFIESQVYQGVVENAASEQA 240
Cdd:PRK13423 161 LAGEYDEVYLVYNEFKSVMSQDITVQQLLPIDPPEAADDEYLPEYIYEPSRDALLAELLPKHVEVQIYRALLESVASEHG 240

                        250       260       270       280
                 ....*....|....*....|....*....|....*....|....*.
gi 937117465 241 ARMVAMKAATDNAGDLMDELQLVYNKARQAAITQEISEIVGGSAAV 286
Cdd:PRK13423 241 ARMTAMDSATKNATEMIGKLTLQYNRARQAAITTELMEIVSGAEAL 286
PRK13422 PRK13422
F0F1 ATP synthase subunit gamma; Provisional
 1-286 5.96e-88

F0F1 ATP synthase subunit gamma; Provisional


Pssm-ID: 184046  Cd Length: 298  Bit Score: 264.22  E-value: 5.96e-88
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 937117465   1 MASGKEIKSKIGSIKNTQKITSAMEMVAASKMKKAQERVASSRPYAENLRQVIGRVAQANLDFTHPFLEEREVKRVGYIV 80
Cdd:PRK13422   1 MSNAREIRSKVQSVKNTQKITGAMELVAASKMRGAIVKMNNVRPYVESANTIIKNVTAASIDYPNPYLFDRDVKRVGYIV 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 937117465  81 ISTDRGLCGGLNSNEFKKVALDVKAWKEKGVEAEFTTLGSKAAGFFQRFGGKLVAKKANLGDTP---SLQDVIGPVKTML 157
Cdd:PRK13422  81 TSTDRGLCGGLNINLFKHVLKEIKNNIEDRVGVDVCVIGSKAENFFAKLKDVNIVATAHYNDKDkegSIRAIGGAVKVML 160

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 937117465 158 DAYSEGKIDRLYVVFNKFVNTMKQEPTIDQLLP---------LPKAEEEVSQHSWDYLYEPNPEAILEALLVRFIESQVY 228
Cdd:PRK13422 161 DKFTAGEIDRLYMSSNQFVSTIKQRPRLQTLLPiqdifsaeeIKANKEKATKGHWDYIYERDIEEVLNALCIRYIEAQVR 240

                        250       260       270       280       290
                 ....*....|....*....|....*....|....*....|....*....|....*...
gi 937117465 229 QGVVENAASEQAARMVAMKAATDNAGDLMDELQLVYNKARQAAITQEISEIVGGSAAV 286
Cdd:PRK13422 241 GAILENAACEQAARMMAMKNATDNASDIIDQLKLDYNKVRQAMITQELAEICSGAAAV 298
PRK13427 PRK13427
F0F1 ATP synthase subunit gamma; Provisional
 1-286 1.46e-76

F0F1 ATP synthase subunit gamma; Provisional


Pssm-ID: 172049  Cd Length: 289  Bit Score: 234.84  E-value: 1.46e-76
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 937117465   1 MASGKEIKSKIGSIKNTQKITSAMEMVAASKMKKAQERVASSRPYAENLRQVIGRVAQANLDFTHPFLEERE-VKRVGYI 79
Cdd:PRK13427   1 MATPREIKKRINSVKNTRKITRTMEMVSTAKSKKATDRVNAAHPYANKIKELVSSLASLEGVVHSPYLRRPEkIRTVALL 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 937117465  80 VISTDRGLCGGLNSNEFKKVALDVKAWKEKGVEAEFTTLGSKAAGFFQRFGGKLVAKKANLGDTPSLQDVIGPVKTMLDA 159
Cdd:PRK13427  81 IITANRGLCGGFNSNLNRMAKARIAELKKKGVNVELHIVGKKGISFFKFAGEKAEKTYTHIDDKSGYKEAEELANLFMER 160

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 937117465 160 YSEGKIDRLYVVFNKFVNTMKQEPTIDQLLPL---PKAEEEVSQHswDYLYEPNPEAILEALLVRFIESQVYQGVVENAA 236
Cdd:PRK13427 161 FANESVDAVEIASTVYYSAASQKPETTRVLPLeppTAAAEGSVQD--DVVYEPSPEAILESLLPLVVKTAFLKAILEANA 238

                        250       260       270       280       290
                 ....*....|....*....|....*....|....*....|....*....|
gi 937117465 237 SEQAARMVAMKAATDNAGDLMDELQLVYNKARQAAITQEISEIVGGSAAV 286
Cdd:PRK13427 239 SEQIARRIAMKSATDAASEMIKLLTRGYNRVRQAKITQEISEIVGGADAL 288
PRK13424 PRK13424
F0F1 ATP synthase subunit gamma; Provisional
 1-285 2.38e-75

F0F1 ATP synthase subunit gamma; Provisional


Pssm-ID: 172047  Cd Length: 291  Bit Score: 231.94  E-value: 2.38e-75
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 937117465   1 MASGKEIKSKIGSIKNTQKITSAMEMVAASKMKKAQERVASSRPYAENLRQVIGRVAQANLDFTHPFLEER-EVKRVGYI 79
Cdd:PRK13424   1 MPSLKDVKVKIAGVKKTKQITKAMNMVASAKLRGAQQRIERFRPYAEKFYDMLGDLASRADSSAHPLLEVReEIKTCGIV 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 937117465  80 VISTDRGLCGGLNSNEFKKvALDVKAWKE-KGVEAEFTTLGSKAAGFFQRFGGKLV---AKKANLGDTpSLQDVIGpvKT 155
Cdd:PRK13424  81 LITSDRGLCGSFNANLINA-ALKLAKQKTaEGKTVKFYCVGKKGRDAIRKTDFEIVtayADQMTSFDF-QLANSIG--LE 156

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 937117465 156 MLDAYSEGKIDRLYVVFNKFVNTMKQEPTIDQLLPL--PKAEEEVSQHSWDYLYEPNPEAILEALLVRFIESQVYQGVVE 233
Cdd:PRK13424 157 VIDGYLTGELDEVVLVYGEFVSMARQLPITLQILPIapEEAEEEEAGASSEYIYEPSVEGLLAELLPRFIKVQIYRGLLD 236

                        250       260       270       280       290
                 ....*....|....*....|....*....|....*....|....*....|..
gi 937117465 234 NAASEQAARMVAMKAATDNAGDLMDELQLVYNKARQAAITQEISEIVGGSAA 285
Cdd:PRK13424 237 TSASEHAARMTAMDNATRNCDDMIGSLTLLYNKTRQASITRELMDIVGGAEA 288
PRK13426 PRK13426
F0F1 ATP synthase subunit gamma; Provisional
 1-285 4.20e-72

F0F1 ATP synthase subunit gamma; Provisional


Pssm-ID: 237385  Cd Length: 291  Bit Score: 223.50  E-value: 4.20e-72
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 937117465   1 MASGKEIKSKIGSIKNTQKITSAMEMVAASKMKKAQERVASSRPYAENLRQVIGRVAQANLDFTHPFLEEREVKRVGYIV 80
Cdd:PRK13426   1 MASLKEIKTRIASVQSTRKITSAMKMVASAKLHKAQGAIENMLPYQRKLNHILTNFLSADLDVESPFTVERPVKRVAIVV 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 937117465  81 ISTDRGLCGGLNSNEFKKVALDVKAWKEKGV-EAEFTTLGSKAAGFFQRFGGKLVAKKANLGDTPSLQDVIGPVKTMLDA 159
Cdd:PRK13426  81 FSSNTSLCGGFNANIIKLLLQTIGEYRTLGQdNILIYPVGKKIEEAVKKLGFKVQGDYQTLADKPSYEEAAALAMRLMEL 160

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 937117465 160 YSEGKIDRLYVVFNKFVNTMKQEPTIDQLLPL----PKAEEEVSQHSWDYLYEPNPEAILEALLVRFIESQVYQGVVENA 235
Cdd:PRK13426 161 FLEGEIDKVELIYHHFKSMGVQVLTRETYLPIdlsqEKNAEHAGGVANDYIIEPSADTVLNDLIPKLLSLKIYTALLDSN 240

                        250       260       270       280       290
                 ....*....|....*....|....*....|....*....|....*....|
gi 937117465 236 ASEQAARMVAMKAATDNAGDLMDELQLVYNKARQAAITQEISEIVGGSAA 285
Cdd:PRK13426 241 ASEHAARMVAMQIATDNANELLQELTLQYNKSRQQAITNELLDIVGGSMA 290
PRK14110 PRK14110
F0F1 ATP synthase subunit gamma; Provisional
 3-286 1.73e-66

F0F1 ATP synthase subunit gamma; Provisional


Pssm-ID: 184514  Cd Length: 291  Bit Score: 209.24  E-value: 1.73e-66
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 937117465   3 SGKEIKSKIGSIKNTQKITSAMEMVAASKMKKAQERVASSRPYAENLRQVIGRVAQANLDFTHPFLEEREVKRVGYIVIS 82
Cdd:PRK14110   5 SPRDIKRKIQGIKNTRRITNAMKVVSAAKLRKAQELLYASRPYSEKLYELISDLAAHIDRESHPLLERREEKNVDLVIIT 84

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 937117465  83 TDRGLCGGLNSNEFKKVALDVKAWKEKGVEAEFTTLGSKAAGFFQRFGGKLVA-------KKANLGDTPSLQDVIgpvkt 155
Cdd:PRK14110  85 ADRGLAGAFNSNVIKTAERLIQEKQSEGVRVNLILIGRKGVQYFSKRGYNIIKsyedvfrKEINFSVVKEVGGIL----- 159

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 937117465 156 mLDAYSEGKIDRLYVVFNKFVNTMKQEPTIDQLLPLPKAEEEVS-QHSWDYLYEPNPEAILEALLVRFIESQVYQGVVEN 234
Cdd:PRK14110 160 -ASRYIEEETDAVYLINNEMITRATYKPKVRKFLPFEVEAQEKKlDELSVYNIEVSEEEFLDKLLQLYLNYQLYRALVES 238

                        250       260       270       280       290
                 ....*....|....*....|....*....|....*....|....*....|..
gi 937117465 235 AASEQAARMVAMKAATDNAGDLMDELQLVYNKARQAAITQEISEIVGGSAAV 286
Cdd:PRK14110 239 NAAEHFARMVAMDNATRNAGELIRKWTLIFNKARQEAITTELIDIVNAAEAM 290
PRK13425 PRK13425
F0F1 ATP synthase subunit gamma; Provisional
 1-286 8.93e-65

F0F1 ATP synthase subunit gamma; Provisional


Pssm-ID: 139564  Cd Length: 291  Bit Score: 204.66  E-value: 8.93e-65
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 937117465   1 MASGKEIKSKIGSIKNTQKITSAMEMVAASKMKKAQERVASSRPYAENLRQVIGRVAqANLDFT-HPFLEER-EVKRVGY 78
Cdd:PRK13425   1 MPTLKDIRVRIKGVKSTQQVTKAMKMVAAAKLRRAQERAIMARPYAAKLKEMLGSLS-AKVDTSlNPLLSPRsEVNKVLV 79

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 937117465  79 IVISTDRGLCGGLNSN----EFKKVALDVKAWKEKGvEAEFTTLGSKAAGFFQRFGGKLVAKKANLGDTPSLQDVIGPVK 154
Cdd:PRK13425  80 ILITSDRGLCGAFNTNiiklAQKVIHEDYAALHAKG-GVSMICAGTRGFDFFRKRGYNIVKGYPGVFQNLDFSVAKEIAE 158

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 937117465 155 TMLDAYSEGKIDRLYVVFNKFVNTMKQEPTIDQLLPLpKAEEEVSQHSWDYLYEPNPEAILEALLVRFIESQVYQGVVEN 234
Cdd:PRK13425 159 TASGMYLRGEVDKVVVVYNEFKSVLAPNLKSEVLLPI-TPEKPGAEGGSDYIYEPSPAAIIDELVPKHLNTQVWRMMLES 237

                        250       260       270       280       290
                 ....*....|....*....|....*....|....*....|....*....|..
gi 937117465 235 AASEQAARMVAMKAATDNAGDLMDELQLVYNKARQAAITQEISEIVGGSAAV 286
Cdd:PRK13425 238 NAAEQAARMTAMDSATENAKELLRTLNISYNRARQAAITKELSEIVAGADAL 289
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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