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MULTISPECIES: TonB-dependent receptor [Pseudoalteromonas]
Protein Classification
TonB-dependent receptor ( domain architecture ID 10613439 )
TonB dependent receptor having a carboxypeptidase regulatory-like domain, may act as a channel to allow import of extracellular nutrients, such as iron-siderophore complexes or non-Fe compounds
List of domain hits
Name
Accession
Description
Interval
E-value
FepA
COG4771 Outer membrane receptor for ferrienterochelin and colicins [Inorganic ion transport and ...
90-640
4.76e-32
Outer membrane receptor for ferrienterochelin and colicins [Inorganic ion transport and metabolism];
Pssm-ID: 443803 [Multi-domain]
Cd Length: 612
Bit Score: 133.06
E-value: 4.76e-32
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 940641997 90 S VRVS L GAN A K A SFD LA QVSDSGP EV I q V LGA R ISSIDLTTAD S GL VIT DA EI DRMPI n R DL TSVAL L A PG --- AVK G DS 166
Cdd:COG4771 5 S LLLL L ALA A Q A ADA LA EDATELE EV V - V TAT R TEQSLSDAPA S VS VIT AE EI EKLGA - T DL ADALR L L PG vsv TRS G GR 82
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 940641997 167 AFGNTA S FG G SSVAENACY I N G LE V T N TRQ G L G CG -- EV P FEFYDQFQ V KT G GY SA KF G - R A T GG T IN TT TK SG T N E W E F 243
Cdd:COG4771 83 GGSSGI S IR G LGGDRVLVL I D G VP V N N PAL G G G GD ls YI P PDDIERIE V IR G PA SA LY G s D A I GG V IN II TK KP T D E L E G 162
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 940641997 244 aavvqfqpdslqe EG S ISR G N NG A G QI frdesldtdskt DVTI S A GGP li E D T L F F YGLINP RD TESTYTWGGDE F SP N D 323
Cdd:COG4771 163 ------------- SV S LGY G S NG N G TY ------------ SGSL S L GGP -- G D K L S F LLSGSY RD RDGYLDYRNGG F VG N S 215
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 940641997 324 Q Y RNESA sggdnlfw GG KL DWDINE NHRLS YFAYSN R R D IERSVYEYNNG - TVG D RIDGAILKRGGEAQ SL S Y T G V L TED 402
Cdd:COG4771 216 G Y ERYNL -------- NA KL GYRLSD NHRLS LSGGYS R Q D RDGGPPTLGDT e ISS D NAGDRDTTTDRGNY SL R Y N G D L GDN 287
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 940641997 403 L VVTA magnikteyetqsenlvcp SITDSRGTANPITGC G AG GSF GANN D ENTQYR LD VE Y VWND - H EI T F G ID Y QE rks 481
Cdd:COG4771 288 L DLSL ------------------- YYSRTDRDSTNGSLG G ST GSF SDSD D TTYGLE LD LT Y PLGG n H TL T L G AE Y RY --- 345
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 940641997 482 enisspigghsydyrtladngswqadngaltnntgaal D YVEDRI F D GG GSFESELTAYYIE D Q W QV T EDFSVKV GLR I D 561
Cdd:COG4771 346 -------------------------------------- D DLDSSS F L GG ADASRDTYGLFAQ D E W KL T DKLTLTA GLR Y D 387
490 500 510 520 530 540 550
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 940641997 562 EFDSW G TTGKLLT S fetdia PRLG FTW D P tg TGDTKVYGT YGR Y ylpvannti FRA A S g VSDITTAY T Y T GVDSQT G A P 640
Cdd:COG4771 388 YYSTF G ASNYTAF S ------ PRLG LRY D L -- SDNLTLRAS YGR G --------- FRA P S - LAELYGSG T G T PGRYVL G N P 448
CarboxypepD_reg
pfam13620 Carboxypeptidase regulatory-like domain;
40-105
3.25e-07
Carboxypeptidase regulatory-like domain;
Pssm-ID: 433354 [Multi-domain]
Cd Length: 81
Bit Score: 48.82
E-value: 3.25e-07
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 940641997 40 A G Y TVTV K N PA TG LE RT LNISE DG SF RF AS LP S G S Y QIQILKN G - AVVAEDS V R V SL G ANAKASFD L 105
Cdd:pfam13620 15 P G A TVTV T N TD TG TV RT TTTDA DG RY RF PG LP P G T Y TVTVSAP G f KTATRTG V T V TA G QTTTLDVT L 81
Name
Accession
Description
Interval
E-value
FepA
COG4771 Outer membrane receptor for ferrienterochelin and colicins [Inorganic ion transport and ...
90-640
4.76e-32
Outer membrane receptor for ferrienterochelin and colicins [Inorganic ion transport and metabolism];
Pssm-ID: 443803 [Multi-domain]
Cd Length: 612
Bit Score: 133.06
E-value: 4.76e-32
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 940641997 90 S VRVS L GAN A K A SFD LA QVSDSGP EV I q V LGA R ISSIDLTTAD S GL VIT DA EI DRMPI n R DL TSVAL L A PG --- AVK G DS 166
Cdd:COG4771 5 S LLLL L ALA A Q A ADA LA EDATELE EV V - V TAT R TEQSLSDAPA S VS VIT AE EI EKLGA - T DL ADALR L L PG vsv TRS G GR 82
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 940641997 167 AFGNTA S FG G SSVAENACY I N G LE V T N TRQ G L G CG -- EV P FEFYDQFQ V KT G GY SA KF G - R A T GG T IN TT TK SG T N E W E F 243
Cdd:COG4771 83 GGSSGI S IR G LGGDRVLVL I D G VP V N N PAL G G G GD ls YI P PDDIERIE V IR G PA SA LY G s D A I GG V IN II TK KP T D E L E G 162
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 940641997 244 aavvqfqpdslqe EG S ISR G N NG A G QI frdesldtdskt DVTI S A GGP li E D T L F F YGLINP RD TESTYTWGGDE F SP N D 323
Cdd:COG4771 163 ------------- SV S LGY G S NG N G TY ------------ SGSL S L GGP -- G D K L S F LLSGSY RD RDGYLDYRNGG F VG N S 215
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 940641997 324 Q Y RNESA sggdnlfw GG KL DWDINE NHRLS YFAYSN R R D IERSVYEYNNG - TVG D RIDGAILKRGGEAQ SL S Y T G V L TED 402
Cdd:COG4771 216 G Y ERYNL -------- NA KL GYRLSD NHRLS LSGGYS R Q D RDGGPPTLGDT e ISS D NAGDRDTTTDRGNY SL R Y N G D L GDN 287
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 940641997 403 L VVTA magnikteyetqsenlvcp SITDSRGTANPITGC G AG GSF GANN D ENTQYR LD VE Y VWND - H EI T F G ID Y QE rks 481
Cdd:COG4771 288 L DLSL ------------------- YYSRTDRDSTNGSLG G ST GSF SDSD D TTYGLE LD LT Y PLGG n H TL T L G AE Y RY --- 345
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 940641997 482 enisspigghsydyrtladngswqadngaltnntgaal D YVEDRI F D GG GSFESELTAYYIE D Q W QV T EDFSVKV GLR I D 561
Cdd:COG4771 346 -------------------------------------- D DLDSSS F L GG ADASRDTYGLFAQ D E W KL T DKLTLTA GLR Y D 387
490 500 510 520 530 540 550
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 940641997 562 EFDSW G TTGKLLT S fetdia PRLG FTW D P tg TGDTKVYGT YGR Y ylpvannti FRA A S g VSDITTAY T Y T GVDSQT G A P 640
Cdd:COG4771 388 YYSTF G ASNYTAF S ------ PRLG LRY D L -- SDNLTLRAS YGR G --------- FRA P S - LAELYGSG T G T PGRYVL G N P 448
ligand_gated_channel
cd01347 TonB dependent/Ligand-Gated channels are created by a monomeric 22 strand (22,24) ...
136-604
2.01e-15
TonB dependent/Ligand-Gated channels are created by a monomeric 22 strand (22,24) anti-parallel beta-barrel. Ligands apparently bind to the large extracellular loops. The N-terminal 150-200 residues form a plug from the periplasmic end of barrel. Energy (proton-motive force) and TonB-dependent conformational alteration of channel (parts of plug, and loops 7 and 8) allow passage of ligand. FepA residues 12-18 form the TonB box, which mediates the interaction with the TonB-containing inner membrane complex. TonB preferentially interacts with ligand-bound receptors. Transport thru the channel may resemble passage thru an air lock. In this model, ligand binding leads to closure of the extracellular end of pore, then a TonB-mediated signal facillitates opening of the interior side of pore, deforming the N-terminal plug and allowing passage of the ligand to the periplasm. Such a mechanism would prevent the free diffusion of small molecules thru the pore.
Pssm-ID: 238657 [Multi-domain]
Cd Length: 635
Bit Score: 80.96
E-value: 2.01e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 940641997 136 VIT DAE I DRM P IN r D L TSVALLA PG -- AVK G DSAF G N T A S FG G SSVAENACYIN GL EVTNTRQ G L G CG -- EV P F E FYDQF 211
Cdd:cd01347 4 VIT AED I EKQ P AT - S L ADLLRRI PG vs VTR G GGGG G S T I S IR G FGPDRTLVLVD GL PLASSNY G R G VD ln TI P P E LIERV 82
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 940641997 212 Q V KT G GY SA KF G R - A T GG TI N TT TK SG T N E WEFAAVVQF qpdslqee GS ISR G NN G agqifrdesldtdskt DVTISAG G 290
Cdd:cd01347 83 E V LK G PS SA LY G S g A I GG VV N II TK RP T D E FGGSVTAGY -------- GS DNS G SS G ---------------- GGGFDVS G 138
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 940641997 291 P L IE D TL F --- F YG LINPR D T est YTW G GDEFSPN D QY R N esasggdnl FWG GKLDW DINENH RL SYF A YSNRR D IERSV 367
Cdd:cd01347 139 A L AD D GA F gar L YG AYRDG D G --- TID G DGQADDS D EE R Y --------- NVA GKLDW RPDDDT RL TLD A GYQDQ D ADGPG 206
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 940641997 368 YEYNNGTV G DRID G AILKRGGEAQSLS Y TGVLTEDLVVTAMAG nikteyetqsenlvcpsitdsrgtanpitgcgaggsf 447
Cdd:cd01347 207 GTLPANGT G SSLG G GPSSNTNGDRDWD Y RDRYRKRASLGLEHD ------------------------------------- 249
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 940641997 448 ga N ND ENTQY R LDVE Y VWN D HEITFG I DYQERKSENISSPIG G H S YDYR T LAD ------ N GSWQADNG A L T NNT G aa LD Y 521
Cdd:cd01347 250 -- L ND TGWTL R ANLS Y SYT D NDGDPL I LNGGNNAAGGDLGRS G Y S SERD T TQL gfdagl N APFGTGPV A H T LTL G -- VE Y 325
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 940641997 522 VEDR ifdgggs FESEL TA Y Y IE D QWQV T E D FSVKV GLR I D ---- EFDSWGTT G KLLTSFETDIA P R LG FTWDP T GT gd TK 597
Cdd:cd01347 326 RREE ------- LDEKQ TA L Y AQ D TIEL T D D LTLTL GLR Y D hydq DSKDTIAG G TTAKKSYSHWS P S LG LVYKL T DG -- LS 396
....*..
gi 940641997 598 V Y GT Y GR 604
Cdd:cd01347 397 L Y AS Y SQ 403
CarboxypepD_reg
pfam13620 Carboxypeptidase regulatory-like domain;
40-105
3.25e-07
Carboxypeptidase regulatory-like domain;
Pssm-ID: 433354 [Multi-domain]
Cd Length: 81
Bit Score: 48.82
E-value: 3.25e-07
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 940641997 40 A G Y TVTV K N PA TG LE RT LNISE DG SF RF AS LP S G S Y QIQILKN G - AVVAEDS V R V SL G ANAKASFD L 105
Cdd:pfam13620 15 P G A TVTV T N TD TG TV RT TTTDA DG RY RF PG LP P G T Y TVTVSAP G f KTATRTG V T V TA G QTTTLDVT L 81
TonB_dep_Rec
pfam00593 TonB dependent receptor; This model now only covers the conserved part of the barrel structure.
442-638
3.23e-04
TonB dependent receptor; This model now only covers the conserved part of the barrel structure.
Pssm-ID: 395474 [Multi-domain]
Cd Length: 475
Bit Score: 44.38
E-value: 3.23e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 940641997 442 G A G G S FGANNDENTQ Y RLDVEYVWNDHEITF G IDYQERKSENISSPIGGHSYDYRTLADNGSWQADNGALTNNTGAA LD Y 521
Cdd:pfam00593 72 G D G L S WLSTLRLGLR Y SSLDGDYTSNSSGLS G AGDYLSDDRLYGLYGLDGDLELSLDLSHDLLLGVELRTAGLDYRR LD D 151
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 940641997 522 VEDRIF D GGGS ------- FESELTAY Y IE D QWQV T EDFSVKV GLR I D EFD ---- SWGTT G KLLTSFETDIA PRLG FTWD P 590
Cdd:pfam00593 152 DAYDPY D PANP ssssysd TTTDSYGL Y LQ D NIKL T DRLTLTL GLR Y D HYS tdgd DGNGG G DNFSRSYSAFS PRLG LVYK P 231
170 180 190 200
....*....|....*....|....*....|....*....|....*...
gi 940641997 591 tg T GDTKV Y GT Y G R YYLPVANNTIFRAA SG VSDITT A YTYTGVDSQ T G 638
Cdd:pfam00593 232 -- T DNLSL Y AS Y S R GFRAPSLGELYGSG SG GGGGAV A GGNPDLKPE T S 277
TonB-siderophor
TIGR01783 TonB-dependent siderophore receptor; This subfamily model encompasses a wide variety of ...
130-644
4.38e-04
TonB-dependent siderophore receptor; This subfamily model encompasses a wide variety of TonB-dependent outer membrane siderophore receptors. It has no overlap with TonB receptors known to transport other substances, but is likely incomplete due to lack of characterizations. It is likely that genuine siderophore receptors will be identified which score below the noise cutoff to this model at which point the model should be updated. [Transport and binding proteins, Cations and iron carrying compounds, Transport and binding proteins, Porins]
Pssm-ID: 273805 [Multi-domain]
Cd Length: 651
Bit Score: 44.33
E-value: 4.38e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 940641997 130 TAD S GL VIT DA E IDRMPINRDLTSVALLAPGA V K G DSAFGNTASFG ---- G SS V AENAC Y IN G LEVTNT rqg LGCGE V PF 205
Cdd:TIGR01783 2 IPQ S VS VIT RQ E LEDQQAGSLSEALQRVPGVV V G G SGGTTQFGNIT irgf G LE V DIDNV Y LD G VPLLSR --- GNLAI V DP 78
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 940641997 206 EFYDQFQ V KT G GY S AKF G R - A T GG T IN TT TK SGTN ew E FAAV V Q F qpdslqee G SIS R GNNGA gqifrdesldtdsktdv 284
Cdd:TIGR01783 79 AMVERVE V LR G PA S LLY G G s A P GG V IN IV TK RPQD -- E PKGS V T F -------- G AGT R SGYRT ----------------- 131
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 940641997 285 TISA GGPL IE D TL f F Y G LI N PR dtestytwggde FSPN D QYRN es AS G GDNLFWGGKL DW DINE -- NH RL SYFAYSN R RD 362
Cdd:TIGR01783 132 AFDL GGPL GA D GT - F R G RL N GA ------------ RQDG D SFYD -- GA G EETRLGATAT DW QLDD rt LL RL GAYYQKE R DR 196
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 940641997 363 IERSVYEYNN GT V G ----- DR ID G AILK R G --- G E AQ S LSYTGVLTEDL V V T AMAGNIKTEYE T Q S ENLVCPSITDSR G t 434
Cdd:TIGR01783 197 GGYGGLPASG GT S G rdlss DR YL G TSSN R N ydd R E YL S YGLSLEYQFND V W T GKQNLRYSYFD T D S NQVQASGYSSDG G - 275
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 940641997 435 anpitgc GA G G S FGAN N DENTQYRL D VEYVWN ------ D H EITF G ID Y QE R KSENISSP i G GH S YDYR tladng S WQ A DN 508
Cdd:TIGR01783 276 ------- LF G R S LTVV N VKQDRVQI D AGLDGE fetgpi E H DLLL G VS Y GQ R TTNRFNNT - G YP S DNIY ------ S LT A TS 341
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 940641997 509 G A L T NNTGAAL D YVEDRIFDGGGSF es E L TAYYIE D Q W QV T edfsvk V G L R I D EF D SWGTT G KLLTSFET D --- IA P R LG 585
Cdd:TIGR01783 342 S A R T DIGDSPK D RALSSTTKALNGV -- A L QRILLA D K W TL T ------ L G G R Y D SV D VKSNN G VAGSTGKR D dsq FT P S LG 413
490 500 510 520 530 540
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 940641997 586 FTWD P tg T G D TKV Y GT Y GRYYL P VANNTIF -- RAASGVSDITTAYTYT GV DSQT G APTGL T 644
Cdd:TIGR01783 414 VAYK P -- T D D WSL Y AS Y AESFK P GGYYPKG ag NSGDILEPEKGKNYEL GV RYDL G DSLLA T 472
Name
Accession
Description
Interval
E-value
FepA
COG4771 Outer membrane receptor for ferrienterochelin and colicins [Inorganic ion transport and ...
90-640
4.76e-32
Outer membrane receptor for ferrienterochelin and colicins [Inorganic ion transport and metabolism];
Pssm-ID: 443803 [Multi-domain]
Cd Length: 612
Bit Score: 133.06
E-value: 4.76e-32
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 940641997 90 S VRVS L GAN A K A SFD LA QVSDSGP EV I q V LGA R ISSIDLTTAD S GL VIT DA EI DRMPI n R DL TSVAL L A PG --- AVK G DS 166
Cdd:COG4771 5 S LLLL L ALA A Q A ADA LA EDATELE EV V - V TAT R TEQSLSDAPA S VS VIT AE EI EKLGA - T DL ADALR L L PG vsv TRS G GR 82
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 940641997 167 AFGNTA S FG G SSVAENACY I N G LE V T N TRQ G L G CG -- EV P FEFYDQFQ V KT G GY SA KF G - R A T GG T IN TT TK SG T N E W E F 243
Cdd:COG4771 83 GGSSGI S IR G LGGDRVLVL I D G VP V N N PAL G G G GD ls YI P PDDIERIE V IR G PA SA LY G s D A I GG V IN II TK KP T D E L E G 162
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 940641997 244 aavvqfqpdslqe EG S ISR G N NG A G QI frdesldtdskt DVTI S A GGP li E D T L F F YGLINP RD TESTYTWGGDE F SP N D 323
Cdd:COG4771 163 ------------- SV S LGY G S NG N G TY ------------ SGSL S L GGP -- G D K L S F LLSGSY RD RDGYLDYRNGG F VG N S 215
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 940641997 324 Q Y RNESA sggdnlfw GG KL DWDINE NHRLS YFAYSN R R D IERSVYEYNNG - TVG D RIDGAILKRGGEAQ SL S Y T G V L TED 402
Cdd:COG4771 216 G Y ERYNL -------- NA KL GYRLSD NHRLS LSGGYS R Q D RDGGPPTLGDT e ISS D NAGDRDTTTDRGNY SL R Y N G D L GDN 287
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 940641997 403 L VVTA magnikteyetqsenlvcp SITDSRGTANPITGC G AG GSF GANN D ENTQYR LD VE Y VWND - H EI T F G ID Y QE rks 481
Cdd:COG4771 288 L DLSL ------------------- YYSRTDRDSTNGSLG G ST GSF SDSD D TTYGLE LD LT Y PLGG n H TL T L G AE Y RY --- 345
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 940641997 482 enisspigghsydyrtladngswqadngaltnntgaal D YVEDRI F D GG GSFESELTAYYIE D Q W QV T EDFSVKV GLR I D 561
Cdd:COG4771 346 -------------------------------------- D DLDSSS F L GG ADASRDTYGLFAQ D E W KL T DKLTLTA GLR Y D 387
490 500 510 520 530 540 550
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 940641997 562 EFDSW G TTGKLLT S fetdia PRLG FTW D P tg TGDTKVYGT YGR Y ylpvannti FRA A S g VSDITTAY T Y T GVDSQT G A P 640
Cdd:COG4771 388 YYSTF G ASNYTAF S ------ PRLG LRY D L -- SDNLTLRAS YGR G --------- FRA P S - LAELYGSG T G T PGRYVL G N P 448
CirA
COG1629 Outer membrane receptor protein, Fe transport [Inorganic ion transport and metabolism];
114-606
5.81e-17
Outer membrane receptor protein, Fe transport [Inorganic ion transport and metabolism];
Pssm-ID: 441236 [Multi-domain]
Cd Length: 644
Bit Score: 85.65
E-value: 5.81e-17
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 940641997 114 E VIQ V LGA R ISSIDLTTAD S GL VI TDAEIDRM P IN r DL TSVALLA PG - A V KGDSAFGNTA S FG G SSVAE N AC -- YIN G LE 190
Cdd:COG1629 2 E EVV V TAT R TDESLQDVPG S VS VI SREQLEDQ P AT - DL GDLLRRV PG v S V TSAGGGAGQI S IR G FGGGG N RV lv LVD G VP 80
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 940641997 191 VTNTRQ G L - G CGEVPF E FYDQFQ V KT G GY SA KF G R - A T GG T IN TT TK SGTNEWEF aavvqfqpdslqe E G S I S R G NN G ag 268
Cdd:COG1629 81 LNDPSG G D g G LSYIDP E DIERVE V LR G PS SA LY G S g A L GG V IN IV TK KPKDGKGG ------------- E V S A S Y G SY G -- 145
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 940641997 269 qifrdesldtds KTDVTI S AG G P li EDT L FFYGLINP RD TESTYTW ggdefspndqyrnesa S GG D NLFWGG KL DWDINE 348
Cdd:COG1629 146 ------------ TYRASL S LS G G -- NGK L AYRLSASY RD SDGYRDN ---------------- S DS D RYNLRA KL GYQLGD 195
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 940641997 349 NH RL SYF A YSNRR D IERSV Y ---------- EYNN GT VGDRI D GAILK R GGEAQ SL S Y TG v L TED L VVT A M A G nikte Y ET 418
Cdd:COG1629 196 DT RL TLS A SYSDS D QDSPG Y ltlaalrprg AMDD GT NPYSN D TDDNT R DRYSL SL E Y EH - L GDG L KLS A S A Y ----- Y RY 269
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 940641997 419 QSEN lvcpsi T DS RG T AN P IT gcga GG SFGANNDE N TQ Y R L DVEYVWN ----- D H EITF G I DYQ ERKSENISS P IGGH S Y 493
Cdd:COG1629 270 DDTD ------ L DS DF T PT P AD ---- GG TLEQTDFD N RT Y G L ELRLTYD lgfgg K H TLLV G L DYQ RQDLDGSGY P LDLG S G 339
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 940641997 494 DYR TL ADNGSWQADN galtnntgaaldyvedrifdgggsfes ELT A Y Y IE D QWQV T EDFSVKV GLR I D ------ EFDSW G 567
Cdd:COG1629 340 SLP TL TSGADDDGTT --------------------------- TSL A L Y AQ D TYKL T DKLTLTA GLR Y D yvsydv DDTVT G 392
490 500 510
....*....|....*....|....*....|....*....
gi 940641997 568 T TGKLLTSFETDIA P R LG F T WDP tg TGDTKV Y GT Y G R YY 606
Cdd:COG1629 393 T DSASGSRSYSAFS P S LG L T YQL -- SPNLSL Y AS Y S R GF 429
ligand_gated_channel
cd01347 TonB dependent/Ligand-Gated channels are created by a monomeric 22 strand (22,24) ...
136-604
2.01e-15
TonB dependent/Ligand-Gated channels are created by a monomeric 22 strand (22,24) anti-parallel beta-barrel. Ligands apparently bind to the large extracellular loops. The N-terminal 150-200 residues form a plug from the periplasmic end of barrel. Energy (proton-motive force) and TonB-dependent conformational alteration of channel (parts of plug, and loops 7 and 8) allow passage of ligand. FepA residues 12-18 form the TonB box, which mediates the interaction with the TonB-containing inner membrane complex. TonB preferentially interacts with ligand-bound receptors. Transport thru the channel may resemble passage thru an air lock. In this model, ligand binding leads to closure of the extracellular end of pore, then a TonB-mediated signal facillitates opening of the interior side of pore, deforming the N-terminal plug and allowing passage of the ligand to the periplasm. Such a mechanism would prevent the free diffusion of small molecules thru the pore.
Pssm-ID: 238657 [Multi-domain]
Cd Length: 635
Bit Score: 80.96
E-value: 2.01e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 940641997 136 VIT DAE I DRM P IN r D L TSVALLA PG -- AVK G DSAF G N T A S FG G SSVAENACYIN GL EVTNTRQ G L G CG -- EV P F E FYDQF 211
Cdd:cd01347 4 VIT AED I EKQ P AT - S L ADLLRRI PG vs VTR G GGGG G S T I S IR G FGPDRTLVLVD GL PLASSNY G R G VD ln TI P P E LIERV 82
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 940641997 212 Q V KT G GY SA KF G R - A T GG TI N TT TK SG T N E WEFAAVVQF qpdslqee GS ISR G NN G agqifrdesldtdskt DVTISAG G 290
Cdd:cd01347 83 E V LK G PS SA LY G S g A I GG VV N II TK RP T D E FGGSVTAGY -------- GS DNS G SS G ---------------- GGGFDVS G 138
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 940641997 291 P L IE D TL F --- F YG LINPR D T est YTW G GDEFSPN D QY R N esasggdnl FWG GKLDW DINENH RL SYF A YSNRR D IERSV 367
Cdd:cd01347 139 A L AD D GA F gar L YG AYRDG D G --- TID G DGQADDS D EE R Y --------- NVA GKLDW RPDDDT RL TLD A GYQDQ D ADGPG 206
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 940641997 368 YEYNNGTV G DRID G AILKRGGEAQSLS Y TGVLTEDLVVTAMAG nikteyetqsenlvcpsitdsrgtanpitgcgaggsf 447
Cdd:cd01347 207 GTLPANGT G SSLG G GPSSNTNGDRDWD Y RDRYRKRASLGLEHD ------------------------------------- 249
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 940641997 448 ga N ND ENTQY R LDVE Y VWN D HEITFG I DYQERKSENISSPIG G H S YDYR T LAD ------ N GSWQADNG A L T NNT G aa LD Y 521
Cdd:cd01347 250 -- L ND TGWTL R ANLS Y SYT D NDGDPL I LNGGNNAAGGDLGRS G Y S SERD T TQL gfdagl N APFGTGPV A H T LTL G -- VE Y 325
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 940641997 522 VEDR ifdgggs FESEL TA Y Y IE D QWQV T E D FSVKV GLR I D ---- EFDSWGTT G KLLTSFETDIA P R LG FTWDP T GT gd TK 597
Cdd:cd01347 326 RREE ------- LDEKQ TA L Y AQ D TIEL T D D LTLTL GLR Y D hydq DSKDTIAG G TTAKKSYSHWS P S LG LVYKL T DG -- LS 396
....*..
gi 940641997 598 V Y GT Y GR 604
Cdd:cd01347 397 L Y AS Y SQ 403
FhuE
COG4773 Outer membrane receptor for ferric coprogen and ferric-rhodotorulic acid [Inorganic ion ...
136-611
4.31e-10
Outer membrane receptor for ferric coprogen and ferric-rhodotorulic acid [Inorganic ion transport and metabolism];
Pssm-ID: 443805 [Multi-domain]
Cd Length: 692
Bit Score: 63.76
E-value: 4.31e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 940641997 136 V I T DAE I DRMPI n RD L TSVALLA PG AVKGDSAF G NTA SF G -- G S S VAEN ac YIN GL EVTNTRQ G L gcge VPFEFYDQFQ V 213
Cdd:COG4773 71 V V T RQL I EDQGA - TT L DDALRNV PG VTVSSYDG G GRD SF S ir G F S IDNY -- LRD GL PLGGFGG G Q ---- PDTANLERVE V 143
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 940641997 214 KT G GYSAKF G RAT - GG TI N TT TK SG T N E W efaavvqfqpdsl Q E E G S I S R G NNGAGQ ifrdesldtdsktd V T ISA GGPL 292
Cdd:COG4773 144 LK G PAGLLY G AGS p GG LV N LV TK RP T A E P ------------- Q G E V S L S A G SWDTYR -------------- A T ADV GGPL 196
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 940641997 293 I ED TLFF Y G L I nprdtes TYTWG GD E F SPNDQY R NESASGG dnlfwggk LDWD INENHR L S y FAYSNRR D IERSVYEY -- 370
Cdd:COG4773 197 N ED GTLR Y R L N ------- AAYED GD S F RDGVDN R RTLIAPS -------- LDWD LTDDTT L T - LGAEYQD D DSTGDRGF lp 260
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 940641997 371 NN GT VG D ----- RIDGAILKRGG E AQS L SYTGV -- LTE D LVVT A M A GNIKTEYETQ S enlvcpsi TDSR G TANPI TG c GA 443
Cdd:COG4773 261 LD GT LL D lprst NLGEPWDYYDT E TTT L FAELE hr FND D WSLR A N A RYSDSDRDGR S -------- AYAY G APDAA TG - TL 331
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 940641997 444 GGSFG A NNDENTQYR LD VEYVWN ------ D H EITF G I DY QERK S ENI S SPI G G --- HSYD Y RT L ADNGSWQA D NGAL T NN 514
Cdd:COG4773 332 TRYAS A RDGDSRSDS LD ANLNGK fetggl E H TLLV G A DY SRYD S DSD S ATA G T ini YNPV Y GN L PEPDFDAS D TDTT T RQ 411
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 940641997 515 TG A aldyvedrifdgggsfeseltay Y IE DQ WQV T EDF S VKV G L R I D EFDSWG T TGKLLTSFET D --- IA PR L G FTW D P t 591
Cdd:COG4773 412 TG L ----------------------- Y AQ DQ ISL T DRL S LLL G G R Y D WYETDS T NRLGGSTTSY D dsa FT PR A G LVY D L - 467
490 500
....*....|....*....|
gi 940641997 592 g T GDTKV Y GT Y GRYYL P VAN 611
Cdd:COG4773 468 - T PGLSL Y AS Y SESFE P QSG 486
Fiu
COG4774 Outer membrane receptor for monomeric catechols [Inorganic ion transport and metabolism];
136-630
3.21e-09
Outer membrane receptor for monomeric catechols [Inorganic ion transport and metabolism];
Pssm-ID: 443806 [Multi-domain]
Cd Length: 639
Bit Score: 60.66
E-value: 3.21e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 940641997 136 V I T DAE I DRMPI n RD L TSVALLA PG AVK G DSAF GN TA SF --- G G S SVAEN ac Y IN GL EVTNTRQ glgcge VPFEFYDQFQ 212
Cdd:COG4774 15 V V T REL I EDQGA - TS L ADALRNV PG VTF G AGEG GN GD SF sir G F S ASGDI -- Y VD GL RDPGQYR ------ RDTFNLERVE 85
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 940641997 213 V KT G GY S AKF GR - AT GG T IN TT TK SG T N E WEFAAVV qfqpdslqeegsisrgnngagqifrde SLDT D SKTDV T ISAG GP 291
Cdd:COG4774 86 V LK G PA S VLY GR g SP GG V IN LV TK RP T D E PFTEVTL --------------------------- TYGS D GQRRA T LDVN GP 138
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 940641997 292 L IE D TLF - FY G LI np RD TE S tytwggdefspndq YR NESAS gg D NLFWGGK L D W DINENH R -- L S Y FAYSNR R DIERS V Y 368
Cdd:COG4774 139 L GD D LAY r LN G MY -- RD SD S -------------- YR DGVDN -- D RWGIAPS L T W RLGDRT R lt L D Y EYQDDD R TPDYG V P 200
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 940641997 369 EYN NG TV ------------ G D RI D gailkrg G E AQ S LSYTG -- VLTEDLVVTAMAGNIKTEYETQS enl VC P SITDSR GT 434
Cdd:COG4774 201 AVA NG RP vdvdrstfygqp D D YS D ------- S E TD S ATLRL eh DFNDNWTLRNALRYSDYDRDYRN --- TY P TGGNAT GT 270
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 940641997 435 AN pitgcg AGGSFGANNDENTQYRL D VEYVWN ---- D H EITF G ID Y -- QERKSENI S SPIGGHSYDYRTLADNGSWQADN 508
Cdd:COG4774 271 VT ------ RSAYRRDQDNDTLSNQT D LTGKFD tggv K H TLLA G VE Y sr EDSDNARY S GGGTAPTVNLYNPVYGAPVTGPT 344
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 940641997 509 GALTN N TG aaldyvedrifdgggsf ESEL T AY Y IE D QWQV T EDF S VKV GLR I D E F -- D SWGT T GKLL TS FET D I A -- PR L 584
Cdd:COG4774 345 LGGAD N DS ----------------- RTDT T GL Y LQ D TISL T DRW S LLA GLR Y D R F dt D YTDR T TGAT TS SYD D S A fs PR A 407
490 500 510 520
....*....|....*....|....*....|....*....|....*.
gi 940641997 585 G FTWD P tg T GDTKV Y GT Y GRYYL P VANNTIFRA A SGVS D ITTAYT Y 630
Cdd:COG4774 408 G LVYK P -- T PNLSL Y AS Y STSFN P GGGAPSLSN A GQAL D PEKSRQ Y 451
BtuB
COG4206 Outer membrane cobalamin receptor protein BtuB [Coenzyme transport and metabolism];
116-423
1.39e-07
Outer membrane cobalamin receptor protein BtuB [Coenzyme transport and metabolism];
Pssm-ID: 443355 [Multi-domain]
Cd Length: 276
Bit Score: 54.11
E-value: 1.39e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 940641997 116 IQ V LGA R ISSIDLTTAD S GL VI TDA E ID R MP i NRD L TSVALLA PG - A V KGDSAF G NT AS FG -- G SSVAENACY I N G LEVT 192
Cdd:COG4206 1 VV V TAT R LEQSKSDLTG S VT VI DAE E LE R SG - ATS L ADALRRV PG v Q V SSSGGP G SA AS IS ir G LGSNQTLVL I D G VPLN 79
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 940641997 193 NTRQ G - LGCGEV P FEFYDQFQ V KT G GY SA KF G - R A T GG T IN T TTK S G TNEWEFAA vvqfqpdslqeeg S I S R G NN G AGQI 270
Cdd:COG4206 80 DPSL G g VDLSLI P PDDIERIE V LK G AA SA LY G s D A I GG V IN I TTK K G KKGFKGSV ------------- S A S Y G SF G TRRL 146
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 940641997 271 FRDE S LDTD s K TDVTI SA GG pliedtlffyglinprdtestyt WGG D EFSP ND QYRNE s AS G GD N LFWGGK L DWDINE N H 350
Cdd:COG4206 147 SASL S GGAG - K FSYSL SA SY ----------------------- RRS D GYRY ND PDLRN - ND G YE N TSLNAR L GYKLGD N G 201
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 940641997 351 R LS YFAYSNRRD ie R SVYEYNNGTVGD R IDGAILKRGGEAQ SL SYTGVLTE D LVVTAMA G NIKTEYE T QSENL 423
Cdd:COG4206 202 S LS LSGGYSDSE -- R GYPGAVGSDRNL R LSLSLEYKLSDGW SL LLLAYYYY D RDYEDGG G DSAGTSN T DGARA 272
CarboxypepD_reg
pfam13620 Carboxypeptidase regulatory-like domain;
40-105
3.25e-07
Carboxypeptidase regulatory-like domain;
Pssm-ID: 433354 [Multi-domain]
Cd Length: 81
Bit Score: 48.82
E-value: 3.25e-07
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 940641997 40 A G Y TVTV K N PA TG LE RT LNISE DG SF RF AS LP S G S Y QIQILKN G - AVVAEDS V R V SL G ANAKASFD L 105
Cdd:pfam13620 15 P G A TVTV T N TD TG TV RT TTTDA DG RY RF PG LP P G T Y TVTVSAP G f KTATRTG V T V TA G QTTTLDVT L 81
FecA
COG4772 Outer membrane receptor for Fe3+-dicitrate [Inorganic ion transport and metabolism];
216-630
1.93e-06
Outer membrane receptor for Fe3+-dicitrate [Inorganic ion transport and metabolism];
Pssm-ID: 443804 [Multi-domain]
Cd Length: 681
Bit Score: 51.85
E-value: 1.93e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 940641997 216 G GYSAKF G - RAT GG T IN TT T KSGTNEWEFAAV V QF qpdslqeegsisr G NN G agqifrdesldtds KTDVTI S A GG PL ie 294
Cdd:COG4772 134 G AAALRY G p QTV GG A IN FV T RTIPTAFGGELR V TG ------------- G SF G -------------- YRRTHA S V GG TV -- 184
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 940641997 295 DTLFFYGLINPRDT estytwggdefspn D QY R NE S ASGGDNLF wg G KL DWDINENHR L S - Y F A Y SN -------------- 359
Cdd:COG4772 185 GNFGYLVEYSRKRG -------------- D GF R DN S GFDINDFN -- A KL GYRLSDRQE L T l K F Q Y YD edantpggltdaqf 248
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 940641997 360 RR D IER S VYEYNNGT v GD R IDG ailkrggeaq SL S Y TGV L TEDLVV T AM A gnikte Y ETQSEN lvc PSITDSRGTANPIT 439
Cdd:COG4772 249 DA D PRQ S YRPADQFD - TR R TQL ---------- SL R Y EHQ L SDNTTL T TT A ------ Y YNDFSR --- NWYIRQNTADPNTP 308
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 940641997 440 G C G AG G SFGANNDENTQY RL DVEYVWN -- D H EITF G ID Y Q erksenisspigg HSYDY R TLAD N GSW Q ADN GA LTNN tga 517
Cdd:COG4772 309 G L G LR G NPRGYRSYGIEP RL THRFELG gv P H TLEV G LR Y H ------------- REEED R KQYV N TYG Q GRS GA GLRR --- 372
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 940641997 518 aldyve DR I F dgggsf ESELT A Y Y IEDQWQV T EDFSVKV GLR IDEFDS ------- WG T T G KLLT S FETD - IA P R LG FTWD 589
Cdd:COG4772 373 ------ DR R F ------ SADAL A A Y AQNRFEL T GRLTLTP GLR YEHIRR drtdrys TR T G G DDSG S NSYS e FL P G LG LLYQ 440
410 420 430 440
....*....|....*....|....*....|....*....|...
gi 940641997 590 P tg T GDTKV Y GTYG R YYL P VANNTIFRAAS G VS D IT -- TAYT Y 630
Cdd:COG4772 441 L -- T DNLQL Y ANVS R GFE P PTFGDLAYGNG G NP D LK pe KSWN Y 481
TonB_dep_Rec
pfam00593 TonB dependent receptor; This model now only covers the conserved part of the barrel structure.
442-638
3.23e-04
TonB dependent receptor; This model now only covers the conserved part of the barrel structure.
Pssm-ID: 395474 [Multi-domain]
Cd Length: 475
Bit Score: 44.38
E-value: 3.23e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 940641997 442 G A G G S FGANNDENTQ Y RLDVEYVWNDHEITF G IDYQERKSENISSPIGGHSYDYRTLADNGSWQADNGALTNNTGAA LD Y 521
Cdd:pfam00593 72 G D G L S WLSTLRLGLR Y SSLDGDYTSNSSGLS G AGDYLSDDRLYGLYGLDGDLELSLDLSHDLLLGVELRTAGLDYRR LD D 151
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 940641997 522 VEDRIF D GGGS ------- FESELTAY Y IE D QWQV T EDFSVKV GLR I D EFD ---- SWGTT G KLLTSFETDIA PRLG FTWD P 590
Cdd:pfam00593 152 DAYDPY D PANP ssssysd TTTDSYGL Y LQ D NIKL T DRLTLTL GLR Y D HYS tdgd DGNGG G DNFSRSYSAFS PRLG LVYK P 231
170 180 190 200
....*....|....*....|....*....|....*....|....*...
gi 940641997 591 tg T GDTKV Y GT Y G R YYLPVANNTIFRAA SG VSDITT A YTYTGVDSQ T G 638
Cdd:pfam00593 232 -- T DNLSL Y AS Y S R GFRAPSLGELYGSG SG GGGGAV A GGNPDLKPE T S 277
TonB-siderophor
TIGR01783 TonB-dependent siderophore receptor; This subfamily model encompasses a wide variety of ...
130-644
4.38e-04
TonB-dependent siderophore receptor; This subfamily model encompasses a wide variety of TonB-dependent outer membrane siderophore receptors. It has no overlap with TonB receptors known to transport other substances, but is likely incomplete due to lack of characterizations. It is likely that genuine siderophore receptors will be identified which score below the noise cutoff to this model at which point the model should be updated. [Transport and binding proteins, Cations and iron carrying compounds, Transport and binding proteins, Porins]
Pssm-ID: 273805 [Multi-domain]
Cd Length: 651
Bit Score: 44.33
E-value: 4.38e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 940641997 130 TAD S GL VIT DA E IDRMPINRDLTSVALLAPGA V K G DSAFGNTASFG ---- G SS V AENAC Y IN G LEVTNT rqg LGCGE V PF 205
Cdd:TIGR01783 2 IPQ S VS VIT RQ E LEDQQAGSLSEALQRVPGVV V G G SGGTTQFGNIT irgf G LE V DIDNV Y LD G VPLLSR --- GNLAI V DP 78
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 940641997 206 EFYDQFQ V KT G GY S AKF G R - A T GG T IN TT TK SGTN ew E FAAV V Q F qpdslqee G SIS R GNNGA gqifrdesldtdsktdv 284
Cdd:TIGR01783 79 AMVERVE V LR G PA S LLY G G s A P GG V IN IV TK RPQD -- E PKGS V T F -------- G AGT R SGYRT ----------------- 131
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 940641997 285 TISA GGPL IE D TL f F Y G LI N PR dtestytwggde FSPN D QYRN es AS G GDNLFWGGKL DW DINE -- NH RL SYFAYSN R RD 362
Cdd:TIGR01783 132 AFDL GGPL GA D GT - F R G RL N GA ------------ RQDG D SFYD -- GA G EETRLGATAT DW QLDD rt LL RL GAYYQKE R DR 196
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 940641997 363 IERSVYEYNN GT V G ----- DR ID G AILK R G --- G E AQ S LSYTGVLTEDL V V T AMAGNIKTEYE T Q S ENLVCPSITDSR G t 434
Cdd:TIGR01783 197 GGYGGLPASG GT S G rdlss DR YL G TSSN R N ydd R E YL S YGLSLEYQFND V W T GKQNLRYSYFD T D S NQVQASGYSSDG G - 275
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 940641997 435 anpitgc GA G G S FGAN N DENTQYRL D VEYVWN ------ D H EITF G ID Y QE R KSENISSP i G GH S YDYR tladng S WQ A DN 508
Cdd:TIGR01783 276 ------- LF G R S LTVV N VKQDRVQI D AGLDGE fetgpi E H DLLL G VS Y GQ R TTNRFNNT - G YP S DNIY ------ S LT A TS 341
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 940641997 509 G A L T NNTGAAL D YVEDRIFDGGGSF es E L TAYYIE D Q W QV T edfsvk V G L R I D EF D SWGTT G KLLTSFET D --- IA P R LG 585
Cdd:TIGR01783 342 S A R T DIGDSPK D RALSSTTKALNGV -- A L QRILLA D K W TL T ------ L G G R Y D SV D VKSNN G VAGSTGKR D dsq FT P S LG 413
490 500 510 520 530 540
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 940641997 586 FTWD P tg T G D TKV Y GT Y GRYYL P VANNTIF -- RAASGVSDITTAYTYT GV DSQT G APTGL T 644
Cdd:TIGR01783 414 VAYK P -- T D D WSL Y AS Y AESFK P GGYYPKG ag NSGDILEPEKGKNYEL GV RYDL G DSLLA T 472
Blast search parameters
Data Source:
Precalculated data, version = cdd.v.3.21
Preset Options: Database: CDSEARCH/cdd Low complexity filter: no Composition Based Adjustment: yes E-value threshold: 0.01
