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Conserved domains on  [gi|952994634|ref|WP_057953331|]
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uroporphyrinogen-III C-methyltransferase [Salinivirga cyanobacteriivorans]

Protein Classification

uroporphyrinogen-III C-methyltransferase( domain architecture ID 10000225)

uroporphyrinogen-III C-methyltransferase catalyzes two sequential methylation reactions (on C2 and C7) of uroporphyrinogen-III (UROGEN) to yield precorrin-2

Graphical summary

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List of domain hits

Name Accession Description Interval E-value
CysG COG0007
Uroporphyrinogen-III methylase (siroheme synthase) [Coenzyme transport and metabolism]; ...
11-244 2.28e-70

Uroporphyrinogen-III methylase (siroheme synthase) [Coenzyme transport and metabolism]; Uroporphyrinogen-III methylase (siroheme synthase) is part of the Pathway/BioSystem: Cobalamine/B12 biosynthesis


:

Pssm-ID: 439778 [Multi-domain]  Cd Length: 245  Bit Score: 216.09  E-value: 2.28e-70
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 952994634  11 IIIAGTGPGDPELLAVKAQKAIASADVIVYDATQIEHIIDFCQSKAKRVKINKDKTRNSdTLRKEIIQILADYHKTGKRV 90
Cdd:COG0007    4 VYLVGAGPGDPDLLTLKALRALQQADVVLYDRLVSPEILALARPDAELIYVGKRGGRHS-LPQEEINALLVELARAGKRV 82
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 952994634  91 VRLKTGDAFMFGSGAAETELLFEMNLPFSVIPGITAGMAAAVYGNVRISEKKEADTVTFYMANQKNHQHENleQIAQLLQ 170
Cdd:COG0007   83 VRLKGGDPFVFGRGGEEAEALAAAGIPFEVVPGITAAIAAPAYAGIPLTHRGVASSVTFVTGHEKDGKLDL--DWAALAR 160
                        170       180       190       200       210       220       230
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 952994634 171 TQATVALYMAENILPQIRDCLLKQKLPKHFPVVAVANASLPNQQVLSATLADIQSILNKIPKNSSVVFFIGKKV 244
Cdd:COG0007  161 PGGTLVIYMGVKNLPEIAAALIAAGRSPDTPVAVIENGTTPDQRVVTGTLATLAELAAEAGLKSPALIVVGEVV 234
 
Name Accession Description Interval E-value
CysG COG0007
Uroporphyrinogen-III methylase (siroheme synthase) [Coenzyme transport and metabolism]; ...
11-244 2.28e-70

Uroporphyrinogen-III methylase (siroheme synthase) [Coenzyme transport and metabolism]; Uroporphyrinogen-III methylase (siroheme synthase) is part of the Pathway/BioSystem: Cobalamine/B12 biosynthesis


Pssm-ID: 439778 [Multi-domain]  Cd Length: 245  Bit Score: 216.09  E-value: 2.28e-70
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 952994634  11 IIIAGTGPGDPELLAVKAQKAIASADVIVYDATQIEHIIDFCQSKAKRVKINKDKTRNSdTLRKEIIQILADYHKTGKRV 90
Cdd:COG0007    4 VYLVGAGPGDPDLLTLKALRALQQADVVLYDRLVSPEILALARPDAELIYVGKRGGRHS-LPQEEINALLVELARAGKRV 82
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 952994634  91 VRLKTGDAFMFGSGAAETELLFEMNLPFSVIPGITAGMAAAVYGNVRISEKKEADTVTFYMANQKNHQHENleQIAQLLQ 170
Cdd:COG0007   83 VRLKGGDPFVFGRGGEEAEALAAAGIPFEVVPGITAAIAAPAYAGIPLTHRGVASSVTFVTGHEKDGKLDL--DWAALAR 160
                        170       180       190       200       210       220       230
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 952994634 171 TQATVALYMAENILPQIRDCLLKQKLPKHFPVVAVANASLPNQQVLSATLADIQSILNKIPKNSSVVFFIGKKV 244
Cdd:COG0007  161 PGGTLVIYMGVKNLPEIAAALIAAGRSPDTPVAVIENGTTPDQRVVTGTLATLAELAAEAGLKSPALIVVGEVV 234
SUMT cd11642
Uroporphyrin-III C-methyltransferase (also known as S-Adenosyl-L-methionine:uroporphyrinogen ...
15-244 4.06e-63

Uroporphyrin-III C-methyltransferase (also known as S-Adenosyl-L-methionine:uroporphyrinogen III methyltransferase, SUMT); SUMT is an enzyme of the cobalamin and siroheme biosynthetic pathway. It catalyzes the first of three steps leading to the formation of siroheme from uroporphyrinogen III; it transfers two methyl groups from S-adenosyl-L-methionine to the C-2 and C-7 atoms of uroporphyrinogen III to yield precorrin-2 via the intermediate formation of precorrin-1. Precorrin-2 is also a precursor for the biosynthesis of vitamin B12, coenzyme F430, siroheme and heme d1. This family includes proteins in which the SUMT domain is fused to other functional domains, such as to a uroporphyrinogen-III synthase domain to form bifunctional uroporphyrinogen-III methylase/uroporphyrinogen-III synthase, or to a dual function dehydrogenase-chelatase domain, as in the case of the multifunctional S-adenosyl-L-methionine (SAM)-dependent bismethyltransferase/dehydrogenase/ferrochelatase CysG, which catalyzes all three steps that transform uroporphyrinogen III into siroheme.


Pssm-ID: 381169  Cd Length: 228  Bit Score: 197.27  E-value: 4.06e-63
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 952994634  15 GTGPGDPELLAVKAQKAIASADVIVYDATQIEHIIDFCQSKAKRVKINKDKTRNSDTLRkEIIQILADYHKTGKRVVRLK 94
Cdd:cd11642    2 GAGPGDPDLLTLKALRALQQADVVLYDRLVSPEILALAPPGAELIYVGKRPGRHSVPQE-EINELLVELAREGKRVVRLK 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 952994634  95 TGDAFMFGSGAAETELLFEMNLPFSVIPGITAGMAAAVYGNVRISEKKEADTVTFYMANQKNHQHEnlEQIAQLLQTQAT 174
Cdd:cd11642   81 GGDPFVFGRGGEEIEALREAGIPFEVVPGITSAIAAAAYAGIPLTHRGVASSVTFVTGHEADGKLP--DDDAALARPGGT 158
                        170       180       190       200       210       220       230
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 952994634 175 VALYMAENILPQIRDCLLKQKLPKHFPVVAVANASLPNQQVLSATLADIQSILNKIPKNSSVVFFIGKKV 244
Cdd:cd11642  159 LVIYMGVSNLEEIAERLIAAGLPPDTPVAIVENATTPDQRVVVGTLAELAEKAAEAGIRSPALIVVGEVV 228
cobA_cysG_Cterm TIGR01469
uroporphyrin-III C-methyltransferase; This model represents enzymes, or enzyme domains, with ...
11-244 3.48e-53

uroporphyrin-III C-methyltransferase; This model represents enzymes, or enzyme domains, with uroporphyrin-III C-methyltransferase activity. This enzyme catalyzes the first step committed to the biosynthesis of either siroheme or cobalamin (vitamin B12) rather than protoheme (heme). Cobalamin contains cobalt while siroheme contains iron. Siroheme is a cofactor for nitrite and sulfite reductases and therefore plays a role in cysteine biosynthesis; many members of this family are CysG, siroheme synthase, with an additional N-terminal domain and with additional oxidation and iron insertion activities. [Biosynthesis of cofactors, prosthetic groups, and carriers, Heme, porphyrin, and cobalamin]


Pssm-ID: 273643  Cd Length: 236  Bit Score: 172.02  E-value: 3.48e-53
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 952994634   11 IIIAGTGPGDPELLAVKAQKAIASADVIVYDATQIEHIIDFCQSKAKRVKINKDKTRNSdTLRKEIIQILADYHKTGKRV 90
Cdd:TIGR01469   2 VYLVGAGPGDPELLTLKALRLLQEADVVLYDALVSPEILAYAPPQAELIDVGKRPGCHS-KKQEEINRLLVELAREGKKV 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 952994634   91 VRLKTGDAFMFGSGAAETELLFEMNLPFSVIPGITAGMAAAVYGNVRISEKKEADTVTFYMANQKN--HQHENLEQIAQL 168
Cdd:TIGR01469  81 VRLKGGDPFVFGRGGEEAEALAEAGIPFEVVPGVTSAIAAAAYAGIPLTHRGVASSVTFVTGHEADdkALEVDWEALAKG 160
                         170       180       190       200       210       220       230
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 952994634  169 lqtQATVALYMAENILPQIRDCLLKQKLPKHFPVVAVANASLPNQQVLSATLADIQSILNKIPKNSSVVFFIGKKV 244
Cdd:TIGR01469 161 ---AGTLVIYMGVRNLPEIAKELIEHGRSPDTPVAVVEWATTPNQRVLIGTLGDLAEKAAEANLKSPALIVIGEVV 233
PRK06136 PRK06136
uroporphyrinogen-III C-methyltransferase;
15-241 6.66e-48

uroporphyrinogen-III C-methyltransferase;


Pssm-ID: 235711  Cd Length: 249  Bit Score: 158.84  E-value: 6.66e-48
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 952994634  15 GTGPGDPELLAVKAQKAIASADVIVYDATQIEHIIDFCQSKAKRVKINKDKTRNSdTLRKEIIQILADYHKTGKRVVRLK 94
Cdd:PRK06136   9 GAGPGDPDLITLKGVRLLEQADVVLYDDLVSPEILAYAKPDAELIYVGKRAGRHS-TKQEEINRLLVDYARKGKVVVRLK 87
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 952994634  95 TGDAFMFGSGAAETELLFEMNLPFSVIPGITAGMAAAVYGNVRISEKKEADTVTF---YMANQKNHQHENLEQIAqllQT 171
Cdd:PRK06136  88 GGDPFVFGRGGEELEALEAAGIPYEVVPGITAAIAAAAYAGIPLTHRGVARSVTFvtgHEAAGKLEPEVNWSALA---DG 164
                        170       180       190       200       210       220       230
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 952994634 172 QATVALYMAENILPQIRDCLLKQKLPKHFPVVAVANASLPNQQVLSATLADIQSILNKIPKNSSVVFFIG 241
Cdd:PRK06136 165 ADTLVIYMGVRNLPYIAAQLLAAGRAPDTPVAIIENGTTPEQRVVRGTLGTIAEGAAAEDIQSPAIIVIG 234
TP_methylase pfam00590
Tetrapyrrole (Corrin/Porphyrin) Methylases; This family uses S-AdoMet in the methylation of ...
11-223 1.03e-44

Tetrapyrrole (Corrin/Porphyrin) Methylases; This family uses S-AdoMet in the methylation of diverse substrates. This family includes a related group of bacterial proteins of unknown function. This family includes the methylase Dipthine synthase.


Pssm-ID: 425769 [Multi-domain]  Cd Length: 209  Bit Score: 149.42  E-value: 1.03e-44
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 952994634   11 IIIAGTGPGDPELLAVKAQKAIASADVIVYDATQIEHIIDFCQSKAKRVKINKDKTRNSDTLRkEIIQILADYHKTGKRV 90
Cdd:pfam00590   2 LYLVGVGPGDPDLLTLRALRALKEADVVLGDDSRALEILLDLLPEDLYFPMTEDKEPLEEAYE-EIAEALAAALRAGKDV 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 952994634   91 VRLKTGDAFMFGSGAAETELLFEMNLPFSVIPGITAGMAAAVYGNVRISEKKEADTVTFYMANQKNhqheNLEQIAQLLQ 170
Cdd:pfam00590  81 ARLVSGDPLVYGTGSYLVEALRAAGIDVEVVPGVSSAQAAAARLGIPLTEGGEVLSVLFLPGLARI----ELRLLEALLA 156
                         170       180       190       200       210
                  ....*....|....*....|....*....|....*....|....*....|...
gi 952994634  171 TQATVALYMAENILPQIRDcLLKQKLPKHFPVVAVANASLPNQQVLSATLADI 223
Cdd:pfam00590 157 NGDTVVLLYGPRRLAELAE-LLLELYPDTTPVAVVERAGTPDEKVVRGTLGEL 208
 
Name Accession Description Interval E-value
CysG COG0007
Uroporphyrinogen-III methylase (siroheme synthase) [Coenzyme transport and metabolism]; ...
11-244 2.28e-70

Uroporphyrinogen-III methylase (siroheme synthase) [Coenzyme transport and metabolism]; Uroporphyrinogen-III methylase (siroheme synthase) is part of the Pathway/BioSystem: Cobalamine/B12 biosynthesis


Pssm-ID: 439778 [Multi-domain]  Cd Length: 245  Bit Score: 216.09  E-value: 2.28e-70
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 952994634  11 IIIAGTGPGDPELLAVKAQKAIASADVIVYDATQIEHIIDFCQSKAKRVKINKDKTRNSdTLRKEIIQILADYHKTGKRV 90
Cdd:COG0007    4 VYLVGAGPGDPDLLTLKALRALQQADVVLYDRLVSPEILALARPDAELIYVGKRGGRHS-LPQEEINALLVELARAGKRV 82
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 952994634  91 VRLKTGDAFMFGSGAAETELLFEMNLPFSVIPGITAGMAAAVYGNVRISEKKEADTVTFYMANQKNHQHENleQIAQLLQ 170
Cdd:COG0007   83 VRLKGGDPFVFGRGGEEAEALAAAGIPFEVVPGITAAIAAPAYAGIPLTHRGVASSVTFVTGHEKDGKLDL--DWAALAR 160
                        170       180       190       200       210       220       230
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 952994634 171 TQATVALYMAENILPQIRDCLLKQKLPKHFPVVAVANASLPNQQVLSATLADIQSILNKIPKNSSVVFFIGKKV 244
Cdd:COG0007  161 PGGTLVIYMGVKNLPEIAAALIAAGRSPDTPVAVIENGTTPDQRVVTGTLATLAELAAEAGLKSPALIVVGEVV 234
SUMT cd11642
Uroporphyrin-III C-methyltransferase (also known as S-Adenosyl-L-methionine:uroporphyrinogen ...
15-244 4.06e-63

Uroporphyrin-III C-methyltransferase (also known as S-Adenosyl-L-methionine:uroporphyrinogen III methyltransferase, SUMT); SUMT is an enzyme of the cobalamin and siroheme biosynthetic pathway. It catalyzes the first of three steps leading to the formation of siroheme from uroporphyrinogen III; it transfers two methyl groups from S-adenosyl-L-methionine to the C-2 and C-7 atoms of uroporphyrinogen III to yield precorrin-2 via the intermediate formation of precorrin-1. Precorrin-2 is also a precursor for the biosynthesis of vitamin B12, coenzyme F430, siroheme and heme d1. This family includes proteins in which the SUMT domain is fused to other functional domains, such as to a uroporphyrinogen-III synthase domain to form bifunctional uroporphyrinogen-III methylase/uroporphyrinogen-III synthase, or to a dual function dehydrogenase-chelatase domain, as in the case of the multifunctional S-adenosyl-L-methionine (SAM)-dependent bismethyltransferase/dehydrogenase/ferrochelatase CysG, which catalyzes all three steps that transform uroporphyrinogen III into siroheme.


Pssm-ID: 381169  Cd Length: 228  Bit Score: 197.27  E-value: 4.06e-63
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 952994634  15 GTGPGDPELLAVKAQKAIASADVIVYDATQIEHIIDFCQSKAKRVKINKDKTRNSDTLRkEIIQILADYHKTGKRVVRLK 94
Cdd:cd11642    2 GAGPGDPDLLTLKALRALQQADVVLYDRLVSPEILALAPPGAELIYVGKRPGRHSVPQE-EINELLVELAREGKRVVRLK 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 952994634  95 TGDAFMFGSGAAETELLFEMNLPFSVIPGITAGMAAAVYGNVRISEKKEADTVTFYMANQKNHQHEnlEQIAQLLQTQAT 174
Cdd:cd11642   81 GGDPFVFGRGGEEIEALREAGIPFEVVPGITSAIAAAAYAGIPLTHRGVASSVTFVTGHEADGKLP--DDDAALARPGGT 158
                        170       180       190       200       210       220       230
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 952994634 175 VALYMAENILPQIRDCLLKQKLPKHFPVVAVANASLPNQQVLSATLADIQSILNKIPKNSSVVFFIGKKV 244
Cdd:cd11642  159 LVIYMGVSNLEEIAERLIAAGLPPDTPVAIVENATTPDQRVVVGTLAELAEKAAEAGIRSPALIVVGEVV 228
cobA_cysG_Cterm TIGR01469
uroporphyrin-III C-methyltransferase; This model represents enzymes, or enzyme domains, with ...
11-244 3.48e-53

uroporphyrin-III C-methyltransferase; This model represents enzymes, or enzyme domains, with uroporphyrin-III C-methyltransferase activity. This enzyme catalyzes the first step committed to the biosynthesis of either siroheme or cobalamin (vitamin B12) rather than protoheme (heme). Cobalamin contains cobalt while siroheme contains iron. Siroheme is a cofactor for nitrite and sulfite reductases and therefore plays a role in cysteine biosynthesis; many members of this family are CysG, siroheme synthase, with an additional N-terminal domain and with additional oxidation and iron insertion activities. [Biosynthesis of cofactors, prosthetic groups, and carriers, Heme, porphyrin, and cobalamin]


Pssm-ID: 273643  Cd Length: 236  Bit Score: 172.02  E-value: 3.48e-53
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 952994634   11 IIIAGTGPGDPELLAVKAQKAIASADVIVYDATQIEHIIDFCQSKAKRVKINKDKTRNSdTLRKEIIQILADYHKTGKRV 90
Cdd:TIGR01469   2 VYLVGAGPGDPELLTLKALRLLQEADVVLYDALVSPEILAYAPPQAELIDVGKRPGCHS-KKQEEINRLLVELAREGKKV 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 952994634   91 VRLKTGDAFMFGSGAAETELLFEMNLPFSVIPGITAGMAAAVYGNVRISEKKEADTVTFYMANQKN--HQHENLEQIAQL 168
Cdd:TIGR01469  81 VRLKGGDPFVFGRGGEEAEALAEAGIPFEVVPGVTSAIAAAAYAGIPLTHRGVASSVTFVTGHEADdkALEVDWEALAKG 160
                         170       180       190       200       210       220       230
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 952994634  169 lqtQATVALYMAENILPQIRDCLLKQKLPKHFPVVAVANASLPNQQVLSATLADIQSILNKIPKNSSVVFFIGKKV 244
Cdd:TIGR01469 161 ---AGTLVIYMGVRNLPEIAKELIEHGRSPDTPVAVVEWATTPNQRVLIGTLGDLAEKAAEANLKSPALIVIGEVV 233
PRK06136 PRK06136
uroporphyrinogen-III C-methyltransferase;
15-241 6.66e-48

uroporphyrinogen-III C-methyltransferase;


Pssm-ID: 235711  Cd Length: 249  Bit Score: 158.84  E-value: 6.66e-48
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 952994634  15 GTGPGDPELLAVKAQKAIASADVIVYDATQIEHIIDFCQSKAKRVKINKDKTRNSdTLRKEIIQILADYHKTGKRVVRLK 94
Cdd:PRK06136   9 GAGPGDPDLITLKGVRLLEQADVVLYDDLVSPEILAYAKPDAELIYVGKRAGRHS-TKQEEINRLLVDYARKGKVVVRLK 87
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 952994634  95 TGDAFMFGSGAAETELLFEMNLPFSVIPGITAGMAAAVYGNVRISEKKEADTVTF---YMANQKNHQHENLEQIAqllQT 171
Cdd:PRK06136  88 GGDPFVFGRGGEELEALEAAGIPYEVVPGITAAIAAAAYAGIPLTHRGVARSVTFvtgHEAAGKLEPEVNWSALA---DG 164
                        170       180       190       200       210       220       230
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 952994634 172 QATVALYMAENILPQIRDCLLKQKLPKHFPVVAVANASLPNQQVLSATLADIQSILNKIPKNSSVVFFIG 241
Cdd:PRK06136 165 ADTLVIYMGVRNLPYIAAQLLAAGRAPDTPVAIIENGTTPEQRVVRGTLGTIAEGAAAEDIQSPAIIVIG 234
TP_methylase pfam00590
Tetrapyrrole (Corrin/Porphyrin) Methylases; This family uses S-AdoMet in the methylation of ...
11-223 1.03e-44

Tetrapyrrole (Corrin/Porphyrin) Methylases; This family uses S-AdoMet in the methylation of diverse substrates. This family includes a related group of bacterial proteins of unknown function. This family includes the methylase Dipthine synthase.


Pssm-ID: 425769 [Multi-domain]  Cd Length: 209  Bit Score: 149.42  E-value: 1.03e-44
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 952994634   11 IIIAGTGPGDPELLAVKAQKAIASADVIVYDATQIEHIIDFCQSKAKRVKINKDKTRNSDTLRkEIIQILADYHKTGKRV 90
Cdd:pfam00590   2 LYLVGVGPGDPDLLTLRALRALKEADVVLGDDSRALEILLDLLPEDLYFPMTEDKEPLEEAYE-EIAEALAAALRAGKDV 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 952994634   91 VRLKTGDAFMFGSGAAETELLFEMNLPFSVIPGITAGMAAAVYGNVRISEKKEADTVTFYMANQKNhqheNLEQIAQLLQ 170
Cdd:pfam00590  81 ARLVSGDPLVYGTGSYLVEALRAAGIDVEVVPGVSSAQAAAARLGIPLTEGGEVLSVLFLPGLARI----ELRLLEALLA 156
                         170       180       190       200       210
                  ....*....|....*....|....*....|....*....|....*....|...
gi 952994634  171 TQATVALYMAENILPQIRDcLLKQKLPKHFPVVAVANASLPNQQVLSATLADI 223
Cdd:pfam00590 157 NGDTVVLLYGPRRLAELAE-LLLELYPDTTPVAVVERAGTPDEKVVRGTLGEL 208
PLN02625 PLN02625
uroporphyrin-III C-methyltransferase
15-244 2.31e-41

uroporphyrin-III C-methyltransferase


Pssm-ID: 178232 [Multi-domain]  Cd Length: 263  Bit Score: 142.46  E-value: 2.31e-41
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 952994634  15 GTGPGDPELLAVKAQKAIASADVIVYDATQIEHIIDFCQSKAKRVKINKDKTRNSDTLRkEIIQILADYHKTGKRVVRLK 94
Cdd:PLN02625  21 GTGPGDPDLLTLKALRLLQTADVVLYDRLVSPDILDLVPPGAELLYVGKRGGYHSRTQE-EIHELLLSFAEAGKTVVRLK 99
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 952994634  95 TGDAFMFGSGAAETELLFEMNLPFSVIPGITAGMAAAVYGNVRISEKKEADTVTFYMANQKNHQHENLEQIAQLLQTQAT 174
Cdd:PLN02625 100 GGDPLVFGRGGEEMDALRKNGIPVTVVPGITAAIGAPAELGIPLTHRGVATSVRFLTGHDREGGTDPLDVAEAAADPDTT 179
                        170       180       190       200       210       220       230
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 952994634 175 VALYMAENILPQIRDCLLKQKLPKHFPVVAVANASLPNQQVLSATLADIQSILNKIPKNSSVVFFIGKKV 244
Cdd:PLN02625 180 LVVYMGLGTLPSLAEKLIAAGLPPDTPAAAVERGTTPEQRVVFGTLEDIAEDVAAAGLVSPTVIVVGEVV 249
Precorrin-4_C11-MT cd11641
Precorrin-4 C11-methyltransferase (CbiF/CobM); Precorrin-4 C11-methyltransferase participates ...
15-242 1.18e-38

Precorrin-4 C11-methyltransferase (CbiF/CobM); Precorrin-4 C11-methyltransferase participates in the pathway toward the biosynthesis of cobalamin (vitamin B12). There are two distinct cobalamin biosynthetic pathways in bacteria. The aerobic pathway requires oxygen, and cobalt is inserted late in the pathway; the anaerobic pathway does not require oxygen, and cobalt insertion is the first committed step towards cobalamin synthesis. In the aerobic pathway, CobM catalyzes the methylation of precorrin-4 at C-11 to yield precorrin-5. In the anaerobic pathway, CibF catalyzes the methylation of cobalt-precorrin-4 to cobalt-precorrin-5. Both CibF and CobM, which are homologous, are included in this model. There are about 30 enzymes involved in vitamin B12 synthetic pathway. The enzymes involved in the aerobic pathway are prefixed Cob and those of the anaerobic pathway Cbi. Most of the enzymes are shared in both pathways and several of these enzymes are pathway-specific.


Pssm-ID: 381168 [Multi-domain]  Cd Length: 225  Bit Score: 134.44  E-value: 1.18e-38
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 952994634  15 GTGPGDPELLAVKAQKAIASADVIVYDATQI-EHIIDFCQSKAKRVkinkdktrNSDTL-RKEIIQILADYHKTGKRVVR 92
Cdd:cd11641    2 GAGPGDPELITVKGARLLEEADVVIYAGSLVpPELLAYAKPGAEIV--------DSAGMtLEEIIEVMREAAREGKDVVR 73
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 952994634  93 LKTGDAFMFGSGAAETELLFEMNLPFSVIPGITAGMAAAVygnvriSEKKE------ADTVTFYMANQKNHQHENlEQIA 166
Cdd:cd11641   74 LHTGDPSLYGAIREQIDALDKLGIPYEVVPGVSSFFAAAA------ALGTEltlpevSQTVILTRLEGRTPVPEG-ESLR 146
                        170       180       190       200       210       220       230
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 952994634 167 QLLQTQATVALYMAENILPQIRDCLLKQKLPKHFPVVAVANASLPNQQVLSATLADIQSILNKIPKNSSVVFFIGK 242
Cdd:cd11641  147 ELAKHGATLAIFLSAALIEEVVEELLAGGYPPDTPVAVVYKASWPDEKIIRGTLADLAEKVKEAGITRTALILVGP 222
cobM_cbiF TIGR01465
precorrin-4 C11-methyltransferase; This model represents precorrin-4 C11-methyltransferase, ...
11-237 4.54e-37

precorrin-4 C11-methyltransferase; This model represents precorrin-4 C11-methyltransferase, one of two methyltransferases commonly referred to as precorrin-3 methylase (the other is precorrin-3B C17-methyltransferase, EC 2.1.1.131). This enzyme participates in the pathway toward the biosynthesis of cobalamin and related products. [Biosynthesis of cofactors, prosthetic groups, and carriers, Heme, porphyrin, and cobalamin]


Pssm-ID: 200107  Cd Length: 247  Bit Score: 130.91  E-value: 4.54e-37
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 952994634   11 IIIAGTGPGDPELLAVKAQKAIASADVIVY-DATQIEHIIDFCQSKAKrvkinkdkTRNSDTLR-KEIIQILADYHKTGK 88
Cdd:TIGR01465   1 VYFIGAGPGDPDLITVKGRKLIESADVILYaGSLVPPELLAHCRPGAE--------VVNSAGMSlEEIVDIMSDAHREGK 72
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 952994634   89 RVVRLKTGDAFMFGSGAAETELLFEMNLPFSVIPGITAGMAAAVYGNVRISEKKEADTVTFYMANQKNHQHEnLEQIAQL 168
Cdd:TIGR01465  73 DVARLHSGDPSIYGAIAEQMRLLEALGIPYEVVPGVSSFFAAAAALGAELTVPEVSQTVILTRASGRTPMPE-GEKLADL 151
                         170       180       190       200       210       220       230
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 952994634  169 LQTQATVALYMAENILPQIRDCLLKQKLPKHFPVVAVANASLPNQQVLSATLADIQSIL--NKIPKNSSVV 237
Cdd:TIGR01465 152 AKHGATMAIFLSAHILDKVVKELIEHGYSEDTPVAVVYRATWPDEKIVRGTLADLADLVreEGIYRTTLIL 222
CobM COG2875
Precorrin-4 methylase [Coenzyme transport and metabolism]; Precorrin-4 methylase is part of ...
11-242 1.18e-35

Precorrin-4 methylase [Coenzyme transport and metabolism]; Precorrin-4 methylase is part of the Pathway/BioSystem: Cobalamine/B12 biosynthesis


Pssm-ID: 442122 [Multi-domain]  Cd Length: 256  Bit Score: 127.48  E-value: 1.18e-35
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 952994634  11 IIIAGTGPGDPELLAVKAQKAIASADVIVYDATQI-EHIIDFCQSKAKRVkinkdktrNSDTL-RKEIIQILADYHKTGK 88
Cdd:COG2875    5 VYFVGAGPGDPDLITVKGRRLLEEADVVLYAGSLVpPELLAYCKPGAEIV--------DSASMtLEEIIALMKEAAAEGK 76
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 952994634  89 RVVRLKTGDAFMFGSGAAETELLFEMNLPFSVIPGITAGMAAA--------------------VYGNVRISEKkeadtvt 148
Cdd:COG2875   77 DVVRLHSGDPSLYGAIAEQMRRLDALGIPYEVVPGVSAFAAAAaalgreltlpevsqtviltrAEGRTPMPEG------- 149
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 952994634 149 fymanqknhqhenlEQIAQLLQTQATVALYMAENILPQIRDCLLKQkLPKHFPVVAVANASLPNQQVLSATLADIQSILN 228
Cdd:COG2875  150 --------------ESLASLAAHGATLAIYLSAHRIDEVVEELLEG-YPPDTPVAVVYRASWPDEKIVRGTLADIAEKVK 214
                        250
                 ....*....|....
gi 952994634 229 KIPKNSSVVFFIGK 242
Cdd:COG2875  215 EAGITRTALILVGP 228
cysG PRK10637
siroheme synthase CysG;
11-226 4.34e-35

siroheme synthase CysG;


Pssm-ID: 182606 [Multi-domain]  Cd Length: 457  Bit Score: 130.26  E-value: 4.34e-35
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 952994634  11 IIIAGTGPGDPELLAVKAQKAIASADVIVYDATQIEHIIDFCQSKAKRVKINKDKTRNSdTLRKEIIQILADYHKTGKRV 90
Cdd:PRK10637 218 VVLVGAGPGDAGLLTLKGLQQIQQADVVVYDRLVSDDIMNLVRRDADRVFVGKRAGYHC-VPQEEINQILLREAQKGKRV 296
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 952994634  91 VRLKTGDAFMFGSGAAETELLFEMNLPFSVIPGITAGMAAAVYGNVRISEKKEADTVTFYMANQKNHQHENLEQIAQLLQ 170
Cdd:PRK10637 297 VRLKGGDPFIFGRGGEELETLCNAGIPFSVVPGITAASGCSAYSGIPLTHRDYAQSVRLVTGHLKTGGELDWENLAAEKQ 376
                        170       180       190       200       210
                 ....*....|....*....|....*....|....*....|....*....|....*.
gi 952994634 171 tqaTVALYMAENILPQIRDCLLKQKLPKHFPVVAVANASLPNQQVLSATLADIQSI 226
Cdd:PRK10637 377 ---TLVFYMGLNQAATIQQKLIEHGMPADMPVALVENGTSVTQRVVSGTLTQLGEL 429
PRK07168 PRK07168
uroporphyrin-III C-methyltransferase;
11-229 2.07e-24

uroporphyrin-III C-methyltransferase;


Pssm-ID: 180864 [Multi-domain]  Cd Length: 474  Bit Score: 101.22  E-value: 2.07e-24
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 952994634  11 IIIAGTGPGDPELLAVKAQKAIASADVIVYDATQIEHIIDFCQSKAKRVKINKDKTRNsdTLRKEIIQI-LADYHKTGKR 89
Cdd:PRK07168   5 VYLVGAGPGDEGLITKKAIECLKRADIVLYDRLLNPFFLSYTKQTCELMYCGKMPKNH--IMRQEMINAhLLQFAKEGKI 82
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 952994634  90 VVRLKTGDAFMFGSGAAETELLFEMNLPFSVIPGITAGMAAAVYGNVRISEKKEADTVTFYMANQKNHQHENLEQIAqlL 169
Cdd:PRK07168  83 VVRLKGGDPSIFGRVGEEAETLAAANIPYEIVPGITSSIAASSYAGIPLTHRNYSNSVTLLTGHAKGPLTDHGKYNS--S 160
                        170       180       190       200       210       220
                 ....*....|....*....|....*....|....*....|....*....|....*....|
gi 952994634 170 QTQATVALYMAENILPQIRDCLLKQKLPKHFPVVAVANASLPNQQVLSATLADIQSILNK 229
Cdd:PRK07168 161 HNSDTIAYYMGIKNLPTICENLRQAGKKEDTPVAVIEWGTTGKQRVVTGTLSTIVSIVKN 220
cbiF PRK15473
cobalt-precorrin-4 methyltransferase;
15-223 3.96e-21

cobalt-precorrin-4 methyltransferase;


Pssm-ID: 185370  Cd Length: 257  Bit Score: 89.04  E-value: 3.96e-21
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 952994634  15 GTGPGDPELLAVKAQKAIASADVIVYDATQI-EHIIDFCQSKAKRvkinkdktRNSDTLR-KEIIQILADYHKTGKRVVR 92
Cdd:PRK15473  14 GAGPGDKELITLKGYRLLQQAQVVIYAGSLInTELLDYCPAQAEC--------HDSAELHlEQIIDLMEAGVKAGKTVVR 85
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 952994634  93 LKTGDAFMFGSGAAETELLFEMNLPFSVIPGITAGMAAAVYGNVR--ISEKKEADTVTFYMANQKNHQHENLEQIAqllQ 170
Cdd:PRK15473  86 LQTGDVSLYGSIREQGEELTKRGIDFQVVPGVSSFLGAAAELGVEytVPEVSQSLIITRMEGRTPVPAREQLESFA---S 162
                        170       180       190       200       210
                 ....*....|....*....|....*....|....*....|....*....|...
gi 952994634 171 TQATVALYMAENILPQIRDCLLKQKLPKHFPVVAVANASLPNQQVLSATLADI 223
Cdd:PRK15473 163 HQTSMAIFLSVQRIHRVAERLIAGGYPATTPVAVIYKATWPESQTVRGTLADI 215
TP_methylase cd11724
uncharacterized family of the tetrapyrrole methylase superfamily; Members of this superfamily ...
15-241 7.20e-21

uncharacterized family of the tetrapyrrole methylase superfamily; Members of this superfamily use S-AdoMet (S-adenosyl-L-methionine or SAM) in the methylation of diverse substrates. Most members catalyze various methylation steps in cobalamin (vitamin B12) biosynthesis. There are two distinct cobalamin biosynthetic pathways in bacteria. The aerobic pathway requires oxygen, and cobalt is inserted late in the pathway; the anaerobic pathway does not require oxygen, and cobalt insertion is the first committed step towards cobalamin synthesis. The enzymes involved in the aerobic pathway are prefixed Cob and those of the anaerobic pathway Cbi. Most of the enzymes are shared by both pathways and a few enzymes are pathway-specific. Diphthine synthase and Ribosomal RNA small subunit methyltransferase I (RsmI) are two superfamily members that are not involved in cobalamin biosynthesis. Diphthine synthase participates in the posttranslational modification of a specific histidine residue in elongation factor 2 (EF-2) of eukaryotes and archaea to diphthamide. RsmI catalyzes the 2-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA. Other superfamily members not involved in cobalamin biosynthesis include the N-terminal tetrapyrrole methylase domain of Bacillus subtilis YabN whose specific function is unknown, and Omphalotus olearius omphalotin methyltransferase which catalyzes the automethylation of its own C-terminus; this C terminus is subsequently released and macrocyclized to give Omphalotin A, a potent nematicide.


Pssm-ID: 381178 [Multi-domain]  Cd Length: 243  Bit Score: 88.00  E-value: 7.20e-21
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 952994634  15 GTGPGDPELLAVKAQKAIASADVI------------------VYDATqiEHIIDFCQSKAKRVKINKDKTRNSDTLRKEI 76
Cdd:cd11724    6 GVGPGDPDLITLRALKAIKKADVVfappdlrkrfaeylagkeVLDDP--HGLFTYYGKKCSPLEEAEKECEELEKQRAEI 83
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 952994634  77 IQILADYHKTGKRVVRLKTGDAFMFGSGAAETELLFEMNlpFSVIPGITAGMAA-AVYGNvRISEKKEADTVTFYMANQK 155
Cdd:cd11724   84 VQKIREALAQGKNVALLDSGDPTIYGPWIWYLEEFADLN--PEVIPGVSSFNAAnAALKR-SLTGGGDSRSVILTAPFAL 160
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 952994634 156 NHQHENLEQIAqllQTQATVALYMAENILPQIRDcLLKQKLPKHFPVVAVANASLPN-QQVLSATLADIQSILNKIPKNS 234
Cdd:cd11724  161 KENEDLLEDLA---ATGDTLVIFMMRLDLDELVE-KLKKHYPPDTPVAIVYHAGYSEkEKVIRGTLDDILEKLGGEKEPF 236

                 ....*..
gi 952994634 235 SVVFFIG 241
Cdd:cd11724  237 LGLIYVG 243
TP_methylase cd09815
S-AdoMet-dependent tetrapyrrole methylases; This superfamily uses S-AdoMet ...
15-223 2.12e-20

S-AdoMet-dependent tetrapyrrole methylases; This superfamily uses S-AdoMet (S-adenosyl-L-methionine or SAM) in the methylation of diverse substrates. Most members catalyze various methylation steps in cobalamin (vitamin B12) biosynthesis. There are two distinct cobalamin biosynthetic pathways in bacteria. The aerobic pathway requires oxygen, and cobalt is inserted late in the pathway; the anaerobic pathway does not require oxygen, and cobalt insertion is the first committed step towards cobalamin synthesis. The enzymes involved in the aerobic pathway are prefixed Cob and those of the anaerobic pathway Cbi. Most of the enzymes are shared by both pathways and a few enzymes are pathway-specific. Diphthine synthase and ribosomal RNA small subunit methyltransferase I (RsmI) are two superfamily members that are not involved in cobalamin biosynthesis. Diphthine synthase participates in the posttranslational modification of a specific histidine residue in elongation factor 2 (EF-2) of eukaryotes and archaea to diphthamide. RsmI catalyzes the 2-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA. Other superfamily members not involved in cobalamin biosynthesis include the N-terminal tetrapyrrole methylase domain of Bacillus subtilis YabN whose specific function is unknown, and Omphalotus olearius omphalotin methyltransferase which catalyzes the automethylation of its own C-terminus; this C terminus is subsequently released and macrocyclized to give Omphalotin A, a potent nematicide.


Pssm-ID: 381167 [Multi-domain]  Cd Length: 219  Bit Score: 86.29  E-value: 2.12e-20
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 952994634  15 GTGPGDPELLAVKAQKAIASADVIVYDAT--------QIEHIIDFCQSKAKrvkinkdktrNSDTLRKEIIQILADYHKT 86
Cdd:cd09815    2 GVGPGDPDLLTLRALEILRAADVVVAEDKdskllslvLRAILKDGKRIYDL----------HDPNVEEEMAELLLEEARQ 71
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 952994634  87 GKRVVRLKTGDAFMFGSGAAETELLFEMNLPFSVIPGITAGMAAAVYGNVRISEkkeadTVTFYMANQKNHQhENLEQIA 166
Cdd:cd09815   72 GKDVAFLSPGDPGVAGTGAELVERAEREGVEVKVIPGVSAADAAAAALGIDLGE-----SFLFVTASDLLEN-PRLLVLK 145
                        170       180       190       200       210
                 ....*....|....*....|....*....|....*....|....*....|....*...
gi 952994634 167 QLLQTQATVALYM-AENILPQIRDcLLKQKLPKHFPVVAVANASLPNQQVLSATLADI 223
Cdd:cd09815  146 ALAKERRHLVLFLdGHRFLKALER-LLKELGEDDTPVVLVANAGSEGEVIRTGTVKEL 202
CobF COG2243
Precorrin-2 methylase [Coenzyme transport and metabolism]; Precorrin-2 methylase is part of ...
11-223 2.46e-19

Precorrin-2 methylase [Coenzyme transport and metabolism]; Precorrin-2 methylase is part of the Pathway/BioSystem: Cobalamine/B12 biosynthesis


Pssm-ID: 441844 [Multi-domain]  Cd Length: 229  Bit Score: 83.61  E-value: 2.46e-19
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 952994634  11 IIIAGTGPGDPELLAVKAQKAIASADVIVY------DATQIEHIIDFCQSKAKRVKI----NKDKTRNSDTlRKEIIQIL 80
Cdd:COG2243    5 LYGVGVGPGDPELLTLKAVRALREADVIAYpakgagKASLAREIVAPYLPPARIVELvfpmTTDYEALVAA-WDEAAARI 83
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 952994634  81 ADYHKTGKRVVRLKTGDAFMFGSGAAETELLFEMNLPFSVIPGITAGMAAAVYGNVRISEKKEADTVTfyMANQknhqhe 160
Cdd:COG2243   84 AEELEAGRDVAFLTEGDPSLYSTFMYLLERLRERGFEVEVIPGITSFSAAAAALGIPLAEGDEPLTVL--PGTL------ 155
                        170       180       190       200       210       220
                 ....*....|....*....|....*....|....*....|....*....|....*....|...
gi 952994634 161 NLEQIAQLLQTQATVALYMAENILPQIRDCLLKQKLPKHFpvVAVANASLPNQQVLSaTLADI 223
Cdd:COG2243  156 LEEELERALDDFDTVVIMKVGRNFPKVREALEEAGLLDRA--WYVERAGMPDERIVP-GLAEV 215
Precorrin_2_C20_MT cd11645
Precorrin-2 C20-methyltransferase, also named CobI or CbiL; Precorrin-2 C20-methyltransferase ...
15-217 3.68e-19

Precorrin-2 C20-methyltransferase, also named CobI or CbiL; Precorrin-2 C20-methyltransferase (also known as S-adenosyl-L-methionine--precorrin-2 methyltransferase) participates in the pathway toward the biosynthesis of cobalamin (vitamin B12). There are two distinct cobalamin biosynthetic pathways in bacteria. The aerobic pathway requires oxygen, and cobalt is inserted late in the pathway; the anaerobic pathway does not require oxygen, and cobalt insertion is the first committed step towards cobalamin synthesis. Precorrin-2 C20-methyltransferase catalyzes methylation at the C-20 position of a cyclic tetrapyrrole ring of precorrin-2 using S-adenosylmethionine as a methyl group source to produce precorrin-3A. In the anaerobic pathway, cobalt is inserted into precorrin-2 by CbiK to generate cobalt-precorrin-2, which is the substrate for CbiL, a C20 methyltransferase. In Clostridium difficile, CbiK and CbiL are fused into a bifunctional enzyme. In the aerobic pathway, the precorrin-2 C20-methyltransferase is named CobI. This family includes CbiL and CobI precorrin-2 C20-methyltransferases, both as stand-alone enzymes and when CbiL forms part of a bifunctional enzyme.


Pssm-ID: 381172 [Multi-domain]  Cd Length: 223  Bit Score: 82.94  E-value: 3.68e-19
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 952994634  15 GTGPGDPELLAVKAQKAIASADVIVYDATQIEHIIDFcqSKAKRVKINKDK---------TRNSDTLR---KEIIQILAD 82
Cdd:cd11645    2 GVGPGDPELLTLKAVRILKEADVIFVPVSKGGEGSAA--LIIAAALLIPDKeiiplefpmTKDREELEeawDEAAEEIAE 79
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 952994634  83 YHKTGKRVVRLKTGDAFMFGSGAAETELLFEMNLPFSVIPGITAGMAAAVYGNVRISEKKEadTVTFYMANqknhqhENL 162
Cdd:cd11645   80 ELKEGKDVAFLTLGDPSLYSTFSYLLERLRAPGVEVEIIPGITSFSAAAARLGIPLAEGDE--SLAILPAT------YDE 151
                        170       180       190       200       210
                 ....*....|....*....|....*....|....*....|....*....|....*
gi 952994634 163 EQIAQLLQTQATVALYMAENILPQIRDCLLKQKLPKHFpvVAVANASLPNQQVLS 217
Cdd:cd11645  152 EELEKALENFDTVVLMKVGRNLEEIKELLEELGLLDKA--VYVERCGMEGERIYT 204
cobI_cbiL TIGR01467
precorrin-2 C(20)-methyltransferase; This model represents precorrin-2 C(20)-methyltransferase, ...
11-215 8.06e-16

precorrin-2 C(20)-methyltransferase; This model represents precorrin-2 C(20)-methyltransferase, one of several closely related S-adenosylmethionine-dependent methyltransferases involved in cobalamin (vitamin B12) biosynthesis. [Biosynthesis of cofactors, prosthetic groups, and carriers, Heme, porphyrin, and cobalamin]


Pssm-ID: 273642 [Multi-domain]  Cd Length: 230  Bit Score: 74.27  E-value: 8.06e-16
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 952994634   11 IIIAGTGPGDPELLAVKAQKAIASADVIVYDATQ----------IEHIIDFCQSKAKRVK--INKDKTRNSDTLRkEIIQ 78
Cdd:TIGR01467   3 LYGVGVGPGDPELITVKALEALRSADVIAVPASKkgreslarkiVEDYLKPNDTRILELVfpMTKDRDELEKAWD-EAAE 81
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 952994634   79 ILADYHKTGKRVVRLKTGDAFMFGSGAAETELLFEMNLPFSVIPGITAGMAAAVYGNVRISEKKEADTVTFYMANQknhq 158
Cdd:TIGR01467  82 AVAAELEEGRDVAFLTLGDPSLYSTFSYLLQRLQGMGIEVEVVPGITSFAACASAAGLPLVEGDESLAILPATAGE---- 157
                         170       180       190       200       210
                  ....*....|....*....|....*....|....*....|....*....|....*..
gi 952994634  159 henlEQIAQLLQTQATVALYMAENILPQIRDCLLKQKLPKHfpVVAVANASLPNQQV 215
Cdd:TIGR01467 158 ----AELEKALAEFDTVVLMKVGRNLPQIKEALAKLGRLDA--AVVVERATMPDEKI 208
cobJ_cbiH TIGR01466
precorrin-3B C17-methyltransferase; This model represents precorrin-3B C17-methyltransferase, ...
11-222 9.81e-16

precorrin-3B C17-methyltransferase; This model represents precorrin-3B C17-methyltransferase, one of two methyltransferases commonly referred to as precorrin-3 methylase (the other is precorrin-4 C11-methyltransferase, EC 2.1.1.133). This enzyme participates in the pathway toward the biosynthesis of cobalamin and related products. Members of this family may appear as fusion proteins with other enzymes of cobalamin biosynthesis. [Biosynthesis of cofactors, prosthetic groups, and carriers, Heme, porphyrin, and cobalamin]


Pssm-ID: 273641 [Multi-domain]  Cd Length: 239  Bit Score: 73.87  E-value: 9.81e-16
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 952994634   11 IIIAGTGPGDPELLAVKAQKAIASADVIV-YDA--TQIEHIIDfcqskakrvkinkDKTRNSDTLRKEI--IQILADYHK 85
Cdd:TIGR01466   1 LYVVGIGPGAEELMTPEAKEALAEADVIVgYKTylDLIEDLIP-------------GKEVVTSGMREEIarAELAIELAA 67
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 952994634   86 TGKRVVRLKTGDAFMFGSGAAETELLFE--MNLPFSVIPGITAGMAAA-------VYGNVRIS-----------EKK--- 142
Cdd:TIGR01466  68 EGRTVALVSSGDPGIYGMAALVFEALEKkgAEVDIEVIPGITAASAAAsllgaplGHDFCVISlsdlltpwpeiEKRlra 147
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 952994634  143 --EADTVT-FYmaNQKNHQHENLeqiaqllqtqatvaLYMAENILPQIRdcllkqklPKHFPVVAVANASLPNQQVLSAT 219
Cdd:TIGR01466 148 aaEADFVIaIY--NPRSKRRPEQ--------------FRRAMEILLEHR--------KPDTPVGIVRNAGREGEEVEITT 203

                  ...
gi 952994634  220 LAD 222
Cdd:TIGR01466 204 LAE 206
PRK05787 PRK05787
cobalt-precorrin-7 (C(5))-methyltransferase;
10-131 4.17e-15

cobalt-precorrin-7 (C(5))-methyltransferase;


Pssm-ID: 235609 [Multi-domain]  Cd Length: 210  Bit Score: 71.82  E-value: 4.17e-15
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 952994634  10 PIIIAGTGPGDPELLAVKAQKAIASADVIVYDATQIEHIIDFCQSKAKRVKINKdktrnsdtlrKEIIQILADYHKtGKR 89
Cdd:PRK05787   1 MIYIVGIGPGDPEYLTLKALEAIRKADVVVGSKRVLELFPELIDGEAFVLTAGL----------RDLLEWLELAAK-GKN 69
                         90       100       110       120
                 ....*....|....*....|....*....|....*....|....
gi 952994634  90 VVRLKTGDAfMFgSGAAETEL-LFEMNLPFSVIPGITA-GMAAA 131
Cdd:PRK05787  70 VVVLSTGDP-LF-SGLGKLLKvRRAVAEDVEVIPGISSvQYAAA 111
Precorrin-6Y-MT cd11644
Precorrin-6Y methyltransferase (also named CbiE); CbiE (precorrin-6Y methyltransferase, also ...
15-224 5.30e-15

Precorrin-6Y methyltransferase (also named CbiE); CbiE (precorrin-6Y methyltransferase, also known as cobalt-precorrin-7 C(5)-methyltransferase, also known as cobalt-precorrin-6Y C(5)-methyltransferase) catalyzes the methylation of C-5 in cobalt-precorrin-7 to form cobalt-precorrin-8. It participates in the pathway toward the biosynthesis of cobalamin (vitamin B12). There are two distinct cobalamin biosynthetic pathways in bacteria. The aerobic pathway requires oxygen, and cobalt is inserted late in the pathway; the anaerobic pathway does not require oxygen, and cobalt insertion is the first committed step towards cobalamin synthesis. CbiE functions in the anaerobic pathway, it is a subunit of precorrin-6Y C5,15-methyltransferase, a bifunctional enzyme: cobalt-precorrin-7 C(5)-methyltransferase (CbiE)/cobalt-precorrin-6B C(15)-methyltransferase (decarboxylating) (CbiT), that catalyzes two methylations (at C-5 and C-15) in precorrin-6Y, as well as the decarboxylation of the acetate side chain located in ring C, in order to generate precorrin-8X. CbiE and CbiT can be found fused (CbiET, also called CobL), or on separate protein chains (CbiE and CbiT). In the aerobic pathway, a single enzyme called CobL catalyzes the methylations at C-5 and C-15, and the decarboxylation of the C-12 acetate side chain of precorrin-6B.


Pssm-ID: 381171 [Multi-domain]  Cd Length: 198  Bit Score: 71.37  E-value: 5.30e-15
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 952994634  15 GTGPGDPELLAVKAQKAIASADVIVYDATQIEHIIDFcqsKAKRVKINkdktrnsdtlRKEIIQILADYHKTGKRVVRLK 94
Cdd:cd11644    2 GIGPGGPEYLTPEAREAIEEADVVIGAKRLLELFPDL---GAEKIPLP----------SEDIAELLEEIAEAGKRVVVLA 68
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 952994634  95 TGDAFMFGSGAAETELLFEMNLpfSVIPGITA-GMAAAvygnvRIseKK---EADTVTFymanqknhqH-ENLEQIAQLL 169
Cdd:cd11644   69 SGDPGFYGIGKTLLRRLGGEEV--EVIPGISSvQLAAA-----RL--GLpweDARLVSL---------HgRDLENLRRAL 130
                        170       180       190       200       210
                 ....*....|....*....|....*....|....*....|....*....|....*.
gi 952994634 170 QTQATVALYMAENILPQ-IRDCLLKQKLPkHFPVVAVANASLPNQQVLSATLADIQ 224
Cdd:cd11644  131 RRGRKVFVLTDGKNTPAeIARLLLERGLG-DSRVTVGENLGYPDERITEGTAEELA 185
Precorrin_3B_C17_MT cd11646
Precorrin-3B C(17)-methyltransferase (also named CobJ or CbiH); Precorrin-3B C(17) ...
11-223 1.27e-14

Precorrin-3B C(17)-methyltransferase (also named CobJ or CbiH); Precorrin-3B C(17)-methyltransferase participates in the pathway toward the biosynthesis of cobalamin (vitamin B12). There are two distinct cobalamin biosynthetic pathways. The aerobic pathway requires oxygen, and cobalt is inserted late in the pathway; the anaerobic pathway does not require oxygen, and cobalt insertion is the first committed step towards cobalamin synthesis. This model includes CobJ of the aerobic pathway and CbiH of the anaerobic pathway, both as stand-alone enzymes and when CobJ or CbiH form part of bifunctional enzymes, such as in Mycobacterium tuberculosis CobIJ where CobJ fuses with a precorrin-2 C(20)-methyltransferase domain, or Bacillus megaterium CbiH60, where CbiH is fused to a nitrite and sulfite reductase-like domain. In the aerobic pathway, once CobG has generated precorrin-3b, CobJ catalyzes the methylation of precorrin-3b at C-17 to form precorrin-4 (the extruded methylated C-20 fragment is left attached as an acyl group at C-1). In the corresponding anaerobic pathway, CbiH carries out this ring contraction, using cobalt-precorrin-3b as a substrate to generate a tetramethylated delta-lactone.


Pssm-ID: 381173 [Multi-domain]  Cd Length: 238  Bit Score: 70.91  E-value: 1.27e-14
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 952994634  11 IIIAGTGPGDPELLAVKAQKAIASADVIV-YDA--TQIEHIIdfcqskakrvkinKDKTRNSDTLRKEI--IQILADYHK 85
Cdd:cd11646    1 LYVVGIGPGSADLMTPRAREALEEADVIVgYKTylDLIEDLL-------------PGKEVISSGMGEEVerAREALELAL 67
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 952994634  86 TGKRVVRLKTGDAFMFGSGAAETELLFEM--NLPFSVIPGITAGMAAA-----VYGN--VRIS-----------EKK--- 142
Cdd:cd11646   68 EGKRVALVSSGDPGIYGMAGLVLELLDERwdDIEVEVVPGITAALAAAallgaPLGHdfAVISlsdlltpweviEKRlra 147
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 952994634 143 --EADTVT-FYmaNQKNHQ-HENLEQIAQllqtqatvalymaenilpqirdcLLKQKLPKHFPVVAVANASLPNQQVLSA 218
Cdd:cd11646  148 aaEADFVIaLY--NPRSKKrPWQLEKALE-----------------------ILLEHRPPDTPVGIVRNAGREGEEVTIT 202

                 ....*
gi 952994634 219 TLADI 223
Cdd:cd11646  203 TLGEL 207
CobJ COG1010
Precorrin-3B methylase [Coenzyme transport and metabolism]; Precorrin-3B methylase is part of ...
11-131 1.97e-14

Precorrin-3B methylase [Coenzyme transport and metabolism]; Precorrin-3B methylase is part of the Pathway/BioSystem: Cobalamine/B12 biosynthesis


Pssm-ID: 440634  Cd Length: 250  Bit Score: 70.48  E-value: 1.97e-14
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 952994634  11 IIIAGTGPGDPELLAVKAQKAIASADVIVYDAT---QIEHIIDfcqskakrvkinkDKTRNSDTLRKEI------IQiLA 81
Cdd:COG1010    6 LYVVGLGPGSAELMTPRARAALAEADVVVGYGTyldLIPPLLP-------------GKEVHASGMREEVerareaLE-LA 71
                         90       100       110       120       130
                 ....*....|....*....|....*....|....*....|....*....|....
gi 952994634  82 dyhKTGKRVVRLKTGDAFMFGSGAAETELLFEMN----LPFSVIPGITAGMAAA 131
Cdd:COG1010   72 ---AEGKTVAVVSSGDPGVYGMAGLVLEVLEEGGawrdVEVEVVPGITAAQAAA 122
CbiE TIGR02467
precorrin-6y C5,15-methyltransferase (decarboxylating), CbiE subunit; This model recognizes ...
13-237 9.67e-13

precorrin-6y C5,15-methyltransferase (decarboxylating), CbiE subunit; This model recognizes the CbiE methylase which is responsible, in part (along with CbiT), for methylating precorrin-6y (or cobalt-precorrin-6y) at both the 5 and 15 positions as well as the concomitant decarbozylation at C-12. In many organisms, this protein is fused to the CbiT subunit. The fused protein, when found in organisms catalyzing the oxidative version of the cobalamin biosynthesis pathway, is called CobL.


Pssm-ID: 274146 [Multi-domain]  Cd Length: 204  Bit Score: 65.03  E-value: 9.67e-13
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 952994634   13 IAGTGPGDPELLAVKAQKAIASADVIVYDATQIEHIIDFCQSKAKRVKINKDKtrnsdtlrKEIIQILADYHKtGKRVVR 92
Cdd:TIGR02467   1 VVGIGPGGPELLTPAAIEAIRKADLVVGGERHLELLAELIGEKREIILTYKDL--------DELLEFIAATRK-EKRVVV 71
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 952994634   93 LKTGDAFMFGSGAAETELLFEMNLpfSVIPGITA-GMAAAvygnvRIseKKEADTVTFYMAnqknHQHENLEQIAQLLQT 171
Cdd:TIGR02467  72 LASGDPLFYGIGRTLAERLGKERL--EIIPGISSvQYAFA-----RL--GLPWQDAVVISL----HGRELDELLLALLRG 138
                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 952994634  172 QATVALYM-AENILPQIRDCLLKQKLPKHFPVVAVANASLPNQQVLSATLADIqSILNKIPKNSSVV 237
Cdd:TIGR02467 139 HRKVAVLTdPRNGPAEIARELIELGIGGSYELTVGENLGYEDERITEGTLEEI-AAAQFDFSPLLVV 204
CobL COG2241
Precorrin-6B methylase 1 [Coenzyme transport and metabolism]; Precorrin-6B methylase 1 is part ...
9-223 4.90e-12

Precorrin-6B methylase 1 [Coenzyme transport and metabolism]; Precorrin-6B methylase 1 is part of the Pathway/BioSystem: Cobalamine/B12 biosynthesis


Pssm-ID: 441842 [Multi-domain]  Cd Length: 207  Bit Score: 63.24  E-value: 4.90e-12
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 952994634   9 KPIIIAGTGPGDPELLAVKAQKAIASADVIVYDATQIEHIIDFcqsKAKRVKINKDktrnsdtLRKEIIQILAdyHKTGK 88
Cdd:COG2241    2 PWLTVVGIGPGGPDGLTPAAREAIAEADVVVGGKRHLELFPDL---GAERIVWPSP-------LSELLEELLA--LLRGR 69
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 952994634  89 RVVRLKTGDAFMFGSGAAETELL--FEMNlpfsVIPGITA-GMAAAvygnvRISEK-KEADTVTFymanqknhqH-ENLE 163
Cdd:COG2241   70 RVVVLASGDPLFYGIGATLARHLpaEEVR----VIPGISSlQLAAA-----RLGWPwQDAAVVSL---------HgRPLE 131
                        170       180       190       200       210       220
                 ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 952994634 164 QIAQLLQTQATVALYMAENILP-QIRDCLLKQKLPkHFPVVAVANASLPNQQVLSATLADI 223
Cdd:COG2241  132 RLLPALAPGRRVLVLTDDGNTPaAIARLLLERGFG-DSRLTVLENLGGPDERITRGTAEEL 191
PRK05765 PRK05765
precorrin-3B C17-methyltransferase; Provisional
11-237 1.48e-11

precorrin-3B C17-methyltransferase; Provisional


Pssm-ID: 235597  Cd Length: 246  Bit Score: 62.49  E-value: 1.48e-11
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 952994634  11 IIIAGTGPGDPELLAVKAQKAIASADVIVYDATQIEHIIDFCQSK----AKrvkinkdktrnsdtLRKEIIQILADYHKT 86
Cdd:PRK05765   4 LYIVGIGPGSKEQRTIKAQEAIEKSNVIIGYNTYLRLISDLLDGKevigAR--------------MKEEIFRANTAIEKA 69
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 952994634  87 --GKRVVRLKTGDAFMFGSGAAETELLFEMNLP--FSVIPGITAGMAAAvygnVRISEKKEADTVTFYMANQKNHQHENL 162
Cdd:PRK05765  70 leGNIVALVSSGDPQVYGMAGLVFELISRRKLDvdVEVIPGVTAALAAA----ARLGSPLSLDFVVISLSDLLIPREEIL 145
                        170       180       190       200       210       220       230
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 952994634 163 EQIAQLLQTQATVALY--MAENILPQIRDCLLKQKLPKHfPVVAVANASLPNQQVLSATLADIQSILNKIPKNSSVV 237
Cdd:PRK05765 146 HRVTKAAEADFVIVFYnpINENLLIEVMDIVSKHRKPNT-PVGLVKSAYRNNENVVITTLSSWKEHMDEIGMTTTMI 221
PRK05576 PRK05576
cobalt-factor II C(20)-methyltransferase;
15-216 1.95e-11

cobalt-factor II C(20)-methyltransferase;


Pssm-ID: 235512 [Multi-domain]  Cd Length: 229  Bit Score: 61.86  E-value: 1.95e-11
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 952994634  15 GTGPGDPELLAVKAQKAIASADVIVYDAT-----QIEHII--DFCQSKAKRVKINKDKTRNSDTLR---KEIIQILADYH 84
Cdd:PRK05576   8 GLGPGDPELLTVKAARILEEADVVYAPASrkgggSLALNIvrPYLKEETEIVELHFPMSKDEEEKEavwKENAEEIAAEA 87
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 952994634  85 KTGKRVVRLKTGDAFMFGSGAAETELLFEMNLPFSVIPGITAGMAAAVYGNVRISEKKEADTVtfymanqknHQHENLEQ 164
Cdd:PRK05576  88 EEGKNVAFITLGDPNLYSTFSHLLEYLKCHDIEVETVPGISSFTAIASRAGVPLAMGDESLAI---------IPATREAL 158
                        170       180       190       200       210
                 ....*....|....*....|....*....|....*....|....*....|..
gi 952994634 165 IAQLLQTQATVALYMAENILPQIRDcLLKQklpKHFPVVAVANASLPNQQVL 216
Cdd:PRK05576 159 IEQALTDFDSVVLMKVYKNFALIEE-LLEE---GYLDALYVRRAYMEGEQIL 206
PRK05990 PRK05990
precorrin-2 C(20)-methyltransferase; Reviewed
15-191 5.05e-09

precorrin-2 C(20)-methyltransferase; Reviewed


Pssm-ID: 180341  Cd Length: 241  Bit Score: 54.99  E-value: 5.05e-09
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 952994634  15 GTGPGDPELLAVKAQKAIASADVIVYDATQ---------IEHIIDFCQSKAKRV-KINKDKTRNSDTLRKEI-------I 77
Cdd:PRK05990   9 GVGPGDPELLTLKALRLLQAAPVVAYFVAKgkkgnafgiVEAHLSPGQTLLPLVyPVTTEILPPPLCYETVIadfydtsA 88
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 952994634  78 QILADYHKTGKRVVRLKTGDAFMFGSgaaetellfEMNL--------PFSVIPGITA--GMAAA-----VYGNVRISekk 142
Cdd:PRK05990  89 EAVAAHLDAGRDVAVICEGDPFFYGS---------YMYLhdrlapryETEVIPGVCSmlGCWSVlgaplVYRNQSLS--- 156
                        170       180       190       200
                 ....*....|....*....|....*....|....*....|....*....
gi 952994634 143 eadTVTFYMAnqknhqHENLEQiaQLLQTQATVALYMAENiLPQIRDCL 191
Cdd:PRK05990 157 ---VLSGVLP------EEELRR--RLADADAAVIMKLGRN-LDKVRRVL 193
cbiH PRK15478
precorrin-3B C(17)-methyltransferase;
13-131 2.61e-05

precorrin-3B C(17)-methyltransferase;


Pssm-ID: 185375 [Multi-domain]  Cd Length: 241  Bit Score: 44.10  E-value: 2.61e-05
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 952994634  13 IAGTGPGDPELLAVKAQKAIASADVIVYDATQIEHIIDFCQskakrvkinkDKTRNSDTLRKEI--IQILADYHKTGKRV 90
Cdd:PRK15478   4 VIGIGPGSQAMMTMEAIEALQAAEIVVGYKTYTHLVKAFTG----------DKQVIKTGMCKEIerCQAAIELAQAGHNV 73
                         90       100       110       120
                 ....*....|....*....|....*....|....*....|...
gi 952994634  91 VRLKTGDAFMFGSGAAETELLFEMNLPFSV--IPGITAGMAAA 131
Cdd:PRK15478  74 ALISSGDAGIYGMAGLVLELVSKQKLDVEVrlIPGMTASIAAA 116
PRK05991 PRK05991
precorrin-3B C17-methyltransferase; Provisional
11-131 1.95e-04

precorrin-3B C17-methyltransferase; Provisional


Pssm-ID: 180342 [Multi-domain]  Cd Length: 250  Bit Score: 41.66  E-value: 1.95e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 952994634  11 IIIAGTGPGDPELLAVKAQKAIASA-DVIVYdatqiEHIIDfcqskakRVKINKDKTRNSDTLRKEIIQILA--DYHKTG 87
Cdd:PRK05991   5 LFVIGTGPGNPEQMTPEALAAVEAAtDFFGY-----GPYLD-------RLPLRADQLRHASDNREELDRAGAalAMAAAG 72
                         90       100       110       120
                 ....*....|....*....|....*....|....*....|....*....
gi 952994634  88 KRVVRLKTGDAFMFGSGAAETELLFE-----MNLPFSVIPGITAGMAAA 131
Cdd:PRK05991  73 ANVCVVSGGDPGVFAMAAAVCEAIENgpaawRAVDLTIVPGVTAMLAVA 121
YabN_N_like cd11723
N-terminal S-AdoMet-dependent tetrapyrrole methylase domain of Bacillus subtilis YabN and ...
11-39 7.82e-03

N-terminal S-AdoMet-dependent tetrapyrrole methylase domain of Bacillus subtilis YabN and similar domains; This family includes the S-AdoMet (S-adenosyl-L-methionine or SAM)-dependent tetrapyrrole methylase (TP-methylase) domain of Bacillus subtilis YabN, and similar domains. YabN is a fusion of an N-terminal TP-methylase and a C-terminal MazG-type nucleotide pyrophosphohydrolase domain. MazG-like NTP-PPases have been implicated in house-cleaning functions such as degrading abnormal (d)NTPs. TP-methylases use S-AdoMet in the methylation of diverse substrates. Most TP-methylase family members catalyze various methylation steps in cobalamin (vitamin B12) biosynthesis, other members like diphthine synthase and ribosomal RNA small subunit methyltransferase I (RsmI) act on other substrates. The specific function of YabN's TP-methylase domain is not known.


Pssm-ID: 381177  Cd Length: 218  Bit Score: 36.70  E-value: 7.82e-03
                         10        20
                 ....*....|....*....|....*....
gi 952994634  11 IIIAGTGPGDPELLAVKAQKAIASADVIV 39
Cdd:cd11723    1 ITIVGLGPGDPDLLTLGALEALKSADKVY 29
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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