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Conserved domains on  [gi|966513659|ref|WP_058530178|]
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flagellar filament capping protein FliD [Legionella rubrilucens]

Protein Classification

flagellar filament capping protein FliD( domain architecture ID 11442561)

flagellar filament capping protein FliD is required for the morphogenesis and elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament

Gene Ontology:  GO:0007155|GO:0009288
PubMed:  27664419

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
FliD COG1345
Flagellar capping protein FliD [Cell motility];
1-550 1.11e-104

Flagellar capping protein FliD [Cell motility];


:

Pssm-ID: 440956 [Multi-domain]  Cd Length: 450  Bit Score: 322.18  E-value: 1.11e-104
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966513659   1 MASISPTG-GSSLDIKAIVDALVAADITPaKSRLDKLEASYTTKLSAVGQIKGSLAKLQTAMVKLSDLQQFYTMKSTVSD 79
Cdd:COG1345    1 MASISSLGlGSGLDTDSLVSQLMAAERAP-LTRLTQQQTSLEAQISAYGTLKSALSSLQDALSALKKSSTFNAKKATSSN 79

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966513659  80 PNLFSASASTEAVPGIYDVEVRYLASRQSLASSPVASANTVVGNGSITIDFGtyssdlstftanpDKQSVTINIApGQNT 159
Cdd:COG1345   80 ESAVTATATSGAAAGSYSIEVTQLAQAQSLASAAFASATTTLGTGTLTITVG-------------DGKTVTITID-ANDT 145

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966513659 160 LQAIRDAINANGSGVKAAIVQDSqGARLTLSSPDTGKNLAMKISVNDADGNNtngaglSALAYDPTAGITnaqETVAARD 239
Cdd:COG1345  146 LADIADAINAAGAGVTASIVNDG-SYRLVLTSKKTGAANAITVSVSGDGALS------ALLGFDPASGMT---ETQAAQD 215

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966513659 240 SEIKINGLTLTQSTNQYKDALAGVTIDLRKADLGTTySLTIENNKAQLTGFVNEFIKQFNEAMTTLNNLTGYNK--ETKQ 317
Cdd:COG1345  216 AKLTVNGITITSSSNTFTDAIDGVTLTLKKVTGGPV-TLTVSTDTDAIKKAIKDFVDAYNELIDTINSLTKYTKdeETAK 294

                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966513659 318 GGLLQGDASTRNLKLSISKILSQPIDtGDSAINSLADIGIKTDAKGLLTLNTADFDAAVNDHYGAIGNLFAKTAvasdsn 397
Cdd:COG1345  295 AGALLGDSTLRSLQSQLRSALSSPVS-GGGSYKSLSDIGITTDKDGKLELDETKLDKALAEDPDAVAKLFTGDG------ 367

                        410       420       430       440       450       460       470       480
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966513659 398 vriksvgadvkagsyainitsftagvtlagtigglsatssdgltlkgsgalknlsiqviggstgdrgsvvVSDGIAAQLN 477
Cdd:COG1345  368 ----------------------------------------------------------------------KTTGIATRLD 377

                        490       500       510       520       530       540       550
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 966513659 478 NLVTDYLGDKGDLANRTKQLNDNLKDLDNQRLRLDTHMTSLRKRYTAQFTRLDVLLSSLQDTSAFLTQQLANL 550
Cdd:COG1345  378 DLLDSYTGSDGTITSRTDGLNKQLKDLDDQIERLEDRLEAREARYRKQFTALDTAMSQLNSQSSYLTQQLASL 450
 
Name Accession Description Interval E-value
FliD COG1345
Flagellar capping protein FliD [Cell motility];
1-550 1.11e-104

Flagellar capping protein FliD [Cell motility];


Pssm-ID: 440956 [Multi-domain]  Cd Length: 450  Bit Score: 322.18  E-value: 1.11e-104
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966513659   1 MASISPTG-GSSLDIKAIVDALVAADITPaKSRLDKLEASYTTKLSAVGQIKGSLAKLQTAMVKLSDLQQFYTMKSTVSD 79
Cdd:COG1345    1 MASISSLGlGSGLDTDSLVSQLMAAERAP-LTRLTQQQTSLEAQISAYGTLKSALSSLQDALSALKKSSTFNAKKATSSN 79

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966513659  80 PNLFSASASTEAVPGIYDVEVRYLASRQSLASSPVASANTVVGNGSITIDFGtyssdlstftanpDKQSVTINIApGQNT 159
Cdd:COG1345   80 ESAVTATATSGAAAGSYSIEVTQLAQAQSLASAAFASATTTLGTGTLTITVG-------------DGKTVTITID-ANDT 145

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966513659 160 LQAIRDAINANGSGVKAAIVQDSqGARLTLSSPDTGKNLAMKISVNDADGNNtngaglSALAYDPTAGITnaqETVAARD 239
Cdd:COG1345  146 LADIADAINAAGAGVTASIVNDG-SYRLVLTSKKTGAANAITVSVSGDGALS------ALLGFDPASGMT---ETQAAQD 215

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966513659 240 SEIKINGLTLTQSTNQYKDALAGVTIDLRKADLGTTySLTIENNKAQLTGFVNEFIKQFNEAMTTLNNLTGYNK--ETKQ 317
Cdd:COG1345  216 AKLTVNGITITSSSNTFTDAIDGVTLTLKKVTGGPV-TLTVSTDTDAIKKAIKDFVDAYNELIDTINSLTKYTKdeETAK 294

                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966513659 318 GGLLQGDASTRNLKLSISKILSQPIDtGDSAINSLADIGIKTDAKGLLTLNTADFDAAVNDHYGAIGNLFAKTAvasdsn 397
Cdd:COG1345  295 AGALLGDSTLRSLQSQLRSALSSPVS-GGGSYKSLSDIGITTDKDGKLELDETKLDKALAEDPDAVAKLFTGDG------ 367

                        410       420       430       440       450       460       470       480
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966513659 398 vriksvgadvkagsyainitsftagvtlagtigglsatssdgltlkgsgalknlsiqviggstgdrgsvvVSDGIAAQLN 477
Cdd:COG1345  368 ----------------------------------------------------------------------KTTGIATRLD 377

                        490       500       510       520       530       540       550
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 966513659 478 NLVTDYLGDKGDLANRTKQLNDNLKDLDNQRLRLDTHMTSLRKRYTAQFTRLDVLLSSLQDTSAFLTQQLANL 550
Cdd:COG1345  378 DLLDSYTGSDGTITSRTDGLNKQLKDLDDQIERLEDRLEAREARYRKQFTALDTAMSQLNSQSSYLTQQLASL 450
fliD PRK08032
flagellar capping protein; Reviewed
 1-547 1.61e-57

flagellar capping protein; Reviewed


Pssm-ID: 236141 [Multi-domain]  Cd Length: 462  Bit Score: 199.15  E-value: 1.61e-57
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966513659   1 MASISPTG-GSSLDIKAIVDALVAADitpaKSRLDKL---EASYTTKLSAVGQIKGSLAKLQTAMVKLSDLQQFYTMKST 76
Cdd:PRK08032   1 MASISSLGvGSGLDLDSLLDSLTAAE----KKRLTPItnqQSSYTAKLTAYGTLKSALEKFQTANTALNKADLFSSTKVS 76

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966513659  77 vSDPNLFSASASTEAVPGIYDVEVRYLASRQSLASSPVASANTVVGNGSITIDFgtyssdlsTFTANPDKQSVTINIAPG 156
Cdd:PRK08032  77 -SSTTAFSATTDSGASAGKYTISVTQLAQAQSLTTATVSSTKEALGTSDSTRTI--------TITQPGRKEPLEIDLTAG 147

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966513659 157 QNTLQAIRDAINANGSGVKAAIVQDSQGA-RLTLSSPDTGKNLAMKISVNDADGNNtngaglSALAYDPTAGITNAQETV 235
Cdd:PRK08032 148 QTSLSGIRDAINKAEGGVSASIIKVGDGEyRLVLTSKDTGTDNAMTISVEGDSKLN------DFLNYDSSTGSGNMTQSV 221

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966513659 236 AARDSEIKINGLTLTQSTNQYKDALAGVTIDLRKADLGTTySLTIENNKAQLTGFVNEFIKQFNEAMTTLNNLTGYnKET 315
Cdd:PRK08032 222 AAQNAKLTVNGIAIERQSNTITDAPEGITLNLKKVTTGNQ-TLTITKDTTKAKEAIKDWVDAYNSLQDTFSSLTKY-TAV 299

                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966513659 316 KQG-------GLLQGDASTRNLKLSISKILSQPIDTGDsaINSLADIGIKTDAK-GLLTLNTADFDAAVNDHYGAIGNLF 387
Cdd:PRK08032 300 DAGadqsssnGALLGDSTLRTIQTQLKSQLANSQSSSD--FKTLAQIGITQDPSdGKLEIDDDKLTKALKEDPAGVKALF 377

                        410       420       430       440       450       460       470       480
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966513659 388 aktavasdsnvriksVGadvkagsyainitsftagvtlagtigglsatssDGLTlkgsgalknlsiqviggstgdrgsvv 467
Cdd:PRK08032 378 ---------------VG---------------------------------DGKK-------------------------- 383

                        490       500       510       520       530       540       550       560
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966513659 468 vsDGIAAQLNNLVTDYLGDKGDLANRTKQLNDNLKDLDNQRLRLDTHMTSLRKRYTAQFTRLDVLLSSLQDTSAFLTQQL 547
Cdd:PRK08032 384 --TGITTQIATNLKSWLSTTGIIKTATDGVNKTLKKLTKQYNAVSDSIDATIARYKAQFTQLDKLMTSLNSTSSYLTQQF 461
FliD_C pfam07195
Flagellar hook-associated protein 2 C-terminus; The flagellar hook-associated protein 2 (HAP2 ...
 237-538 1.18e-31

Flagellar hook-associated protein 2 C-terminus; The flagellar hook-associated protein 2 (HAP2 or FliD) forms the distal end of the flagella, and plays a role in mucin specific adhesion of the bacteria. This alignment covers the C-terminal region of this family of proteins.


Pssm-ID: 429344 [Multi-domain]  Cd Length: 230  Bit Score: 122.01  E-value: 1.18e-31
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966513659  237 ARDSEIKINGLTLTQSTNQYKDALAGVTIDLRKADLGTTYSLTIENNKAQLTGFVNEFIKQFNEAMTTLNNLTGY--NKE 314
Cdd:pfam07195   1 AQNAEFTVDGIKVTSSSNTVTDVIDGVTLNLTKTTEGGETTLSVSTDTDGIKEAIKDFVDAYNELITTINELTSYtlDEE 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966513659  315 TKQGGLLQGDASTRNLKLSISKILSQPidTGDSAINSLADIGIKTDAK-GLLTLNTADFDAAVNDHYGAIGNLFAKTAVA 393
Cdd:pfam07195  81 TKKAGALAGDSTLRSILSQLRSVLSSS--VSDGSISSLADIGITTDSDyGTLELDEEKLDKALKENPDSVAELFTGDGSR 158

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966513659  394 SDSnvriksvgadvkagsyainitsftagvtlagtigglsatssdgltlkgsgalknlsiqviggstgdrgsvvvsdGIA 473
Cdd:pfam07195 159 VDT--------------------------------------------------------------------------GFA 164

                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 966513659  474 AQLNNLVTDYLG-DKGDLANRTKQLNDNLKDLDNQRLRLDTHMTSLRKRYTAQFTRLDVLLSSLQD 538
Cdd:pfam07195 165 KRLTDLLKSYVGaSNGTIAGRSDSLNKQIKRLDKQIEDLDKRLETLEARLTAQFTAMDTAVSKMNA 230
 
Name Accession Description Interval E-value
FliD COG1345
Flagellar capping protein FliD [Cell motility];
1-550 1.11e-104

Flagellar capping protein FliD [Cell motility];


Pssm-ID: 440956 [Multi-domain]  Cd Length: 450  Bit Score: 322.18  E-value: 1.11e-104
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966513659   1 MASISPTG-GSSLDIKAIVDALVAADITPaKSRLDKLEASYTTKLSAVGQIKGSLAKLQTAMVKLSDLQQFYTMKSTVSD 79
Cdd:COG1345    1 MASISSLGlGSGLDTDSLVSQLMAAERAP-LTRLTQQQTSLEAQISAYGTLKSALSSLQDALSALKKSSTFNAKKATSSN 79

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966513659  80 PNLFSASASTEAVPGIYDVEVRYLASRQSLASSPVASANTVVGNGSITIDFGtyssdlstftanpDKQSVTINIApGQNT 159
Cdd:COG1345   80 ESAVTATATSGAAAGSYSIEVTQLAQAQSLASAAFASATTTLGTGTLTITVG-------------DGKTVTITID-ANDT 145

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966513659 160 LQAIRDAINANGSGVKAAIVQDSqGARLTLSSPDTGKNLAMKISVNDADGNNtngaglSALAYDPTAGITnaqETVAARD 239
Cdd:COG1345  146 LADIADAINAAGAGVTASIVNDG-SYRLVLTSKKTGAANAITVSVSGDGALS------ALLGFDPASGMT---ETQAAQD 215

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966513659 240 SEIKINGLTLTQSTNQYKDALAGVTIDLRKADLGTTySLTIENNKAQLTGFVNEFIKQFNEAMTTLNNLTGYNK--ETKQ 317
Cdd:COG1345  216 AKLTVNGITITSSSNTFTDAIDGVTLTLKKVTGGPV-TLTVSTDTDAIKKAIKDFVDAYNELIDTINSLTKYTKdeETAK 294

                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966513659 318 GGLLQGDASTRNLKLSISKILSQPIDtGDSAINSLADIGIKTDAKGLLTLNTADFDAAVNDHYGAIGNLFAKTAvasdsn 397
Cdd:COG1345  295 AGALLGDSTLRSLQSQLRSALSSPVS-GGGSYKSLSDIGITTDKDGKLELDETKLDKALAEDPDAVAKLFTGDG------ 367

                        410       420       430       440       450       460       470       480
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966513659 398 vriksvgadvkagsyainitsftagvtlagtigglsatssdgltlkgsgalknlsiqviggstgdrgsvvVSDGIAAQLN 477
Cdd:COG1345  368 ----------------------------------------------------------------------KTTGIATRLD 377

                        490       500       510       520       530       540       550
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 966513659 478 NLVTDYLGDKGDLANRTKQLNDNLKDLDNQRLRLDTHMTSLRKRYTAQFTRLDVLLSSLQDTSAFLTQQLANL 550
Cdd:COG1345  378 DLLDSYTGSDGTITSRTDGLNKQLKDLDDQIERLEDRLEAREARYRKQFTALDTAMSQLNSQSSYLTQQLASL 450
fliD PRK08032
flagellar capping protein; Reviewed
 1-547 1.61e-57

flagellar capping protein; Reviewed


Pssm-ID: 236141 [Multi-domain]  Cd Length: 462  Bit Score: 199.15  E-value: 1.61e-57
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966513659   1 MASISPTG-GSSLDIKAIVDALVAADitpaKSRLDKL---EASYTTKLSAVGQIKGSLAKLQTAMVKLSDLQQFYTMKST 76
Cdd:PRK08032   1 MASISSLGvGSGLDLDSLLDSLTAAE----KKRLTPItnqQSSYTAKLTAYGTLKSALEKFQTANTALNKADLFSSTKVS 76

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966513659  77 vSDPNLFSASASTEAVPGIYDVEVRYLASRQSLASSPVASANTVVGNGSITIDFgtyssdlsTFTANPDKQSVTINIAPG 156
Cdd:PRK08032  77 -SSTTAFSATTDSGASAGKYTISVTQLAQAQSLTTATVSSTKEALGTSDSTRTI--------TITQPGRKEPLEIDLTAG 147

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966513659 157 QNTLQAIRDAINANGSGVKAAIVQDSQGA-RLTLSSPDTGKNLAMKISVNDADGNNtngaglSALAYDPTAGITNAQETV 235
Cdd:PRK08032 148 QTSLSGIRDAINKAEGGVSASIIKVGDGEyRLVLTSKDTGTDNAMTISVEGDSKLN------DFLNYDSSTGSGNMTQSV 221

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966513659 236 AARDSEIKINGLTLTQSTNQYKDALAGVTIDLRKADLGTTySLTIENNKAQLTGFVNEFIKQFNEAMTTLNNLTGYnKET 315
Cdd:PRK08032 222 AAQNAKLTVNGIAIERQSNTITDAPEGITLNLKKVTTGNQ-TLTITKDTTKAKEAIKDWVDAYNSLQDTFSSLTKY-TAV 299

                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966513659 316 KQG-------GLLQGDASTRNLKLSISKILSQPIDTGDsaINSLADIGIKTDAK-GLLTLNTADFDAAVNDHYGAIGNLF 387
Cdd:PRK08032 300 DAGadqsssnGALLGDSTLRTIQTQLKSQLANSQSSSD--FKTLAQIGITQDPSdGKLEIDDDKLTKALKEDPAGVKALF 377

                        410       420       430       440       450       460       470       480
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966513659 388 aktavasdsnvriksVGadvkagsyainitsftagvtlagtigglsatssDGLTlkgsgalknlsiqviggstgdrgsvv 467
Cdd:PRK08032 378 ---------------VG---------------------------------DGKK-------------------------- 383

                        490       500       510       520       530       540       550       560
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966513659 468 vsDGIAAQLNNLVTDYLGDKGDLANRTKQLNDNLKDLDNQRLRLDTHMTSLRKRYTAQFTRLDVLLSSLQDTSAFLTQQL 547
Cdd:PRK08032 384 --TGITTQIATNLKSWLSTTGIIKTATDGVNKTLKKLTKQYNAVSDSIDATIARYKAQFTQLDKLMTSLNSTSSYLTQQF 461
FliD_C pfam07195
Flagellar hook-associated protein 2 C-terminus; The flagellar hook-associated protein 2 (HAP2 ...
 237-538 1.18e-31

Flagellar hook-associated protein 2 C-terminus; The flagellar hook-associated protein 2 (HAP2 or FliD) forms the distal end of the flagella, and plays a role in mucin specific adhesion of the bacteria. This alignment covers the C-terminal region of this family of proteins.


Pssm-ID: 429344 [Multi-domain]  Cd Length: 230  Bit Score: 122.01  E-value: 1.18e-31
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966513659  237 ARDSEIKINGLTLTQSTNQYKDALAGVTIDLRKADLGTTYSLTIENNKAQLTGFVNEFIKQFNEAMTTLNNLTGY--NKE 314
Cdd:pfam07195   1 AQNAEFTVDGIKVTSSSNTVTDVIDGVTLNLTKTTEGGETTLSVSTDTDGIKEAIKDFVDAYNELITTINELTSYtlDEE 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966513659  315 TKQGGLLQGDASTRNLKLSISKILSQPidTGDSAINSLADIGIKTDAK-GLLTLNTADFDAAVNDHYGAIGNLFAKTAVA 393
Cdd:pfam07195  81 TKKAGALAGDSTLRSILSQLRSVLSSS--VSDGSISSLADIGITTDSDyGTLELDEEKLDKALKENPDSVAELFTGDGSR 158

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966513659  394 SDSnvriksvgadvkagsyainitsftagvtlagtigglsatssdgltlkgsgalknlsiqviggstgdrgsvvvsdGIA 473
Cdd:pfam07195 159 VDT--------------------------------------------------------------------------GFA 164

                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 966513659  474 AQLNNLVTDYLG-DKGDLANRTKQLNDNLKDLDNQRLRLDTHMTSLRKRYTAQFTRLDVLLSSLQD 538
Cdd:pfam07195 165 KRLTDLLKSYVGaSNGTIAGRSDSLNKQIKRLDKQIEDLDKRLETLEARLTAQFTAMDTAVSKMNA 230
PRK12765 PRK12765
flagellar filament capping protein FliD;
17-545 3.88e-29

flagellar filament capping protein FliD;


Pssm-ID: 237194 [Multi-domain]  Cd Length: 595  Bit Score: 121.54  E-value: 3.88e-29
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966513659  17 IVDALVAADITPAKSRLDKLEASYTTKLSAVGQIKGSLAKLQTAMVKLSDLQQFYTMKSTVSDPNLFSASASTEAVPGIY 96
Cdd:PRK12765  21 TIDKLKEADQKAQIDPITTKIEENTTKQKDLTAIKTLLSNFKTSVSSLADETSYLKRKVSISDNPPASVTVNSGVNLQSM 100

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966513659  97 DVEVRYLASRQSLASSPVASANTVVG-NGSITIDFgtyssdlsTFTANPDKQSVTINIApgqNTLQAIRDAIN-ANGSGV 174
Cdd:PRK12765 101 KINVSQLAQKDVYQSKGFANDSSFVNaTLTGETDL--------TIFSNGKEYTITVDKS---TTYRDLADKINeASGGKI 169

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966513659 175 KAAI--VQDSQGARLTLSSPDTGKNLAMKIS-VNDADGNNTNGAG-LSALAYDPTAGITNAQETVA-------------- 236
Cdd:PRK12765 170 QAKIlnVGGKNPYRLVLQSKETGADNAISFYaGKKDAQSDNDAENiFKSLGWDLDDTSTIDPGKDKkgygikdaslhiqt 249

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966513659 237 ARDSEIKINGLTLTQSTNQYKDALAGVTIDLRKadlGTTYSLTIENNKAQLTGFVNEFIKQFNEAMTTLNNLTGYNKETK 316
Cdd:PRK12765 250 AQNAEFTYNGIKITRSSNTIDDLGVGVTLTLNK---TGSINFDIQQDTEGVTKAVEDLVDAYNNLVTNLNAATSYNSETG 326

                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966513659 317 QGGLLQGDASTRNLKLSISK-ILSQPIDTGDSAINSLADIGIKTDAKGLLTLNTADFDAAVNDHYGAIGNLFAKTAVASD 395
Cdd:PRK12765 327 TKGTFQGVSEITSIRSSILAdLFSQVVDGTDEDGKSLQDFGLSLNSDGTLSFDSSKFEQKVSEDPDSTQSFFSGSTKYED 406

                        410       420       430       440       450       460       470       480
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966513659 396 SNVRIKSVGA---DVKAGSYAIN----ITSFTAGVTL------------AGTIGGLSAT---SSDGLTLKGSGAlKNLSI 453
Cdd:PRK12765 407 ISHTGEVVKSgslNIQTGDLTINgkgiNFKTLTGKTAeenalnlqnainSAGIEGVKVSvdsKGFRLVLKGSGG-EDIEI 485

                        490       500       510       520       530       540       550       560
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966513659 454 -------QVIGGSTGD-RGSVVVSDGIAAQLNNLVTDYLGDKGDLANRTKQLNDNLKDLDNQRlrlDTHMTSLRKRYTA- 524
Cdd:PRK12765 486 kgdatalKELGLSDTTiNGKSIETKGIFSKLKDTLQEMTGKDGSLTKYDESLTNEIKSLTTSK---ESTQELIDTKYETm 562

                        570       580
                 ....*....|....*....|...
gi 966513659 525 --QFTRLDVLLSSLQDTSAFLTQ 545
Cdd:PRK12765 563 anKWLQYDSIIAKLEQQFSTLKN 585
fliD PRK08724
flagellar filament capping protein FliD;
3-233 9.27e-22

flagellar filament capping protein FliD;


Pssm-ID: 236335 [Multi-domain]  Cd Length: 673  Bit Score: 99.18  E-value: 9.27e-22
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966513659   3 SISPTG-GSSLDIKAIVDALVAADITPAKSRLDKLEASYTTKLSAVGQIKGSLAKLQTAMVKLSDLQQFYTMKSTVSDPN 81
Cdd:PRK08724   2 SLGPMGmSGGMDINSMVSKIVDAERVPKQQRIDNERTDIDTSISAYGRLRESLDTMKNLMTNFRQEKAFAVRTVDTSDED 81

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966513659  82 LFSASASTEAVPGIYDVEVRYLASRQSLASSPVASaNTVVGNGSITIDFGtyssdlstftanpdKQSVTINIApGQNTLQ 161
Cdd:PRK08724  82 VVSATATTDAIAGKYAIDVLQLAQSHKVASDVLDE-DAKFGPGKLQISLG--------------DKSFTLDVV-GNSKLV 145

                        170       180       190       200       210       220       230
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 966513659 162 AIRDAINANGS--GVKAAIVQDSQGARLTLSSPDTGKNLAMKISVnDADGNNTngagLSALAYDPTAGITNAQE 233
Cdd:PRK08724 146 DIVRGINGAKSnpGVRASIINDVEGPRLILASNVSGKDNQIKISV-DAEYGNP----LKRFEYKTLEDRVRALE 214
FliD_N pfam02465
Flagellar hook-associated protein 2 N-terminus; The flagellar hook-associated protein 2 (HAP2 ...
 10-107 1.10e-18

Flagellar hook-associated protein 2 N-terminus; The flagellar hook-associated protein 2 (HAP2 or FliD) forms the distal end of the flagella, and plays a role in mucin specific adhesion of the bacteria. This alignment covers the N-terminal region of this family of proteins.


Pssm-ID: 460566 [Multi-domain]  Cd Length: 97  Bit Score: 81.07  E-value: 1.10e-18
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966513659   10 SSLDIKAIVDALVAADITPaKSRLDKLEASYTTKLSAVGQIKGSLAKLQTAMVKLSDLQQFYTMKSTVSDPNLFSASAST 89
Cdd:pfam02465   1 SGLDTDSIVDQLMAAERAP-LDRLEQQKTTLEWKQSAYGELNSKLSSLQSALKALSSSSTFNAKKATSSNESVVTATASS 79

                          90
                  ....*....|....*...
gi 966513659   90 EAVPGIYDVEVRYLASRQ 107
Cdd:pfam02465  80 GAAAGSYSIEVTQLAQAQ 97
fliD PRK08453
flagellar filament capping protein FliD;
110-387 6.30e-17

flagellar filament capping protein FliD;


Pssm-ID: 181432 [Multi-domain]  Cd Length: 673  Bit Score: 84.12  E-value: 6.30e-17
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966513659 110 ASSPVASANT--VVGNGSITIDFGTYSSDLSTFTANPDkqsvtiNIAPGQNTLQAIRDAINANGSgvkaaIVQDSQGARL 187
Cdd:PRK08453 322 SSRTIKEGKLegVISIGGIKLDLSALTKEGNTSEENAD------AIAQAINAKAGLYAFKNAEGK-----LVINSKTGMV 390

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966513659 188 TLSSPDTGKNLAMKisvndaDGNNTNGAGLSALAY-DPTAGITNAQEtvaARDSEIKINGLTLTQSTNQYKDALAGVTID 266
Cdd:PRK08453 391 TIKGEDALGKKSLK------DLGLKAGTVQSYEASqETLFMSKNLQK---ASDAKFTYNGVSITRPTNEVNDVISGVNIT 461

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966513659 267 LRKA-DLGTTYSLTIENNKAQLTGFVNEFIKQFNEAMTTLNNLTGYNKETKQGGLLQGDASTRNLKLSISKILSQPIDTG 345
Cdd:PRK08453 462 LEQTtEPNKPAIISVSRDNQAIIDSLKEFVKAYNELIPKLDEDTRYDADTKIAGIFNGVGDIRSIRSSLNNVFSYSVHTD 541

                        250       260       270       280
                 ....*....|....*....|....*....|....*....|..
gi 966513659 346 DSAiNSLADIGIKTDAKGLLTLNTADFDAAVNDHYGAIGNLF 387
Cdd:PRK08453 542 NGV-ESLMKYGLSLDEKGVMTLDEAKLSSALNSDPKATQDFF 582
fliD PRK06798
flagellar hook-associated protein 2;
33-376 1.54e-13

flagellar hook-associated protein 2;


Pssm-ID: 180698 [Multi-domain]  Cd Length: 440  Bit Score: 72.89  E-value: 1.54e-13
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966513659  33 LDKLEASYTTKLSAVGQIKGSLAKLQTAMVKL----SDLQQFY--TMKSTVSDPNLFSASASTEAVPGIYDVEVRYLASR 106
Cdd:PRK06798  35 LEMKKTPYTNQKQSLTSEKLLYASLKKEFSSFlqtfKDLTTFKgnEKKVTLSQEGYITVQADASAIAGTYNITVENLAQR 114

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966513659 107 QSLASSPVASANTVVGNGSitidfgtyssdlsTFTANPDKQSVTINIapgqnTLQAIRDAINANGSGVKAAivqdSQGAR 186
Cdd:PRK06798 115 HQITSKPVPDIDAKIGVDE-------------TIKINGKEIKVTKDM-----TYKDLINKINSGNYGVSAY----TLGNK 172

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966513659 187 LTLSSPDTGKNLAMKISVNDadgnntnGAGLSALAYDPTAGITnAQETVAARDSEIKINGLTLTQSTNQYkDALAGVTID 266
Cdd:PRK06798 173 IFFTSTTEGEEGSIKFTDGD-------SGFLEAIGLVQSSGVA-ANDITAAENAEYTINGIKGTSATNKI-ETIPGVTIN 243

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966513659 267 LRKADlGTTYSLTIEN-NKAQLTGFVNEFIKQFNEAMTTLNNLTGynketkQGGLLQGDASTRNLKLSISKILSQPIDTg 345
Cdd:PRK06798 244 LKKET-TEPIKLTIQDsNVKDAANLIKKMVDEYNKAVSTVDLFAG------KGGALQGSAIMFSINRAMNNVFTFSQDG- 315

                        330       340       350
                 ....*....|....*....|....*....|.
gi 966513659 346 dsaiNSLADIGIKTDAKGLLTLNTADFDAAV 376
Cdd:PRK06798 316 ----NYLFSFGIQVDKEGTMKVDEEALKKAL 342
fliD PRK06664
flagellar hook-associated protein FliD; Validated
 236-397 1.78e-12

flagellar hook-associated protein FliD; Validated


Pssm-ID: 235848 [Multi-domain]  Cd Length: 661  Bit Score: 70.18  E-value: 1.78e-12
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966513659 236 AARDSEIKINGLTLTQSTNQYKDALAGVTIDLRKADLGTTySLTIENNKAQLTGFVNEFIKQFNEAMTTLNNLTGYNKE- 314
Cdd:PRK06664 389 EAKDAKIKFDGVEVERDKNEITDLIPGVTLNLHKASEDPV-TLKIEPDYEKIKNLIIEFVAAYNEVLAEINIVTSNEKSs 467

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966513659 315 ----------------TKQGGLLQGDASTRNLKLSISKILSQPIDTGD-SAINSLADIGIKTDA---------KGLLTLN 368
Cdd:PRK06664 468 iieeltylsdeekeeaYKNLGLLRGEFTLLRLKSRLKTIISSSYPTSDdNAFRMLNQIGISTNSvgssggliqDGYLELD 547

                        170       180
                 ....*....|....*....|....*....
gi 966513659 369 TADFDAAVNDHYGAIGNLFaktavASDSN 397
Cdd:PRK06664 548 EKKLDEVLKENPDSVRELF-----AFDSN 571
fliD PRK07737
flagellar hook-associated protein 2;
10-387 1.15e-11

flagellar hook-associated protein 2;


Pssm-ID: 236082 [Multi-domain]  Cd Length: 501  Bit Score: 67.14  E-value: 1.15e-11
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966513659  10 SSLDIKAIVDALVAADITPaksrLDKLEASYTT---KLSAVGQIKGSLAKLQTAMVKLSDLQQFYTMKS-TVSDPNLFSA 85
Cdd:PRK07737  10 SGMDIDDIVSKLMKTERAP----LDKLTQKKQTlewQRDSYREMNTLLKDLDDYIFNNITRQSTYLKKTvTSSNESVVTA 85

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966513659  86 SASTEAVPGIYDVEVRYLASRQSLASSPVASANTvvgNGSITIDFGTYSSDLSTftanpdKQSVTINIAPGqNTLQAIRD 165
Cdd:PRK07737  86 TASSSAANGSTTMQVTQLATAATWKSSAKTSFYT---GADQTLTFNVTNPGETT------AKTVEISVKQT-DTLDDVIS 155

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966513659 166 AINANGSGVKAAIVQDSQGA----RLTLSSPDTGKNLAMKIsvndADGnNTNGAGLSALAYDPTAGITNAQETVAARDSE 241
Cdd:PRK07737 156 KLNSSDLGVSAFKDKIWNGTeyveTIAITSKATGAGASIQA----ADG-ATASFFSQQLGFTNLDADNELTAKTEGQNAQ 230

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966513659 242 IKINGLTLTQSTNQYkdALAGVTIDLRKADLGTTySLTIENNKAQLTGFVNEFIKQFNEAMTTLNN------------LT 309
Cdd:PRK07737 231 VTINGLQTERTSNTF--TINGVTYTLKNTTAGTV-TLSVATDVDGIFNKIKDFVDKYNELIDKINAklkeeryrdyppLT 307

                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966513659 310 GYNKE------------TKQGGLLQGDASTRNLKLSISKILSQPIDTGDSAINSLADIGIKTDAK----GLLTLNTADFD 373
Cdd:PRK07737 308 DEQKEamtekqielweeKAKSGLLRGDSILSSALSKMRMDFYTKVEGIDGGFSQLAQIGITTSSNyldgGKLEIDETKLR 387

                        410
                 ....*....|....
gi 966513659 374 AAVNDHYGAIGNLF 387
Cdd:PRK07737 388 QKIKENPDAVYQLF 401
fliD PRK08724
flagellar filament capping protein FliD;
221-387 4.30e-11

flagellar filament capping protein FliD;


Pssm-ID: 236335 [Multi-domain]  Cd Length: 673  Bit Score: 65.66  E-value: 4.30e-11
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966513659 221 AYDPTAGITNAQetvAARDSEIKINGL-TLTQSTNQYKDALAGVTIDLRkadlGTT------YSLTIENNKAQLTGFVNE 293
Cdd:PRK08724 425 AFDLYSGMTEVQ---SAQDSMVVLDGVaQLSSNNNVIEDAIEGVDLTLK----GKTdknkppAEIGVEYDRQSVRNDIEQ 497

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966513659 294 FIKQFNEAMTTLNNLTGYNKETKQGGLLQGDASTRNLKLSISKILSQPIDTGDSAINSLADIGIKTDAKGLLTLNTADFD 373
Cdd:PRK08724 498 FVAAYNQFYQTSKALSGVDPATGQKGPLAGDSTVRSADSRLKSVFSSSIEQAPENLKSLTEFGITTTRQGTLEINYDMLD 577

                        170
                 ....*....|....
gi 966513659 374 AAVNDHYGAIGNLF 387
Cdd:PRK08724 578 RQLNNNFNKLEEFF 591
AidA COG3468
Autotransporter adhesin AidA [Cell wall/membrane/envelope biogenesis, Intracellular ...
 114-494 4.57e-03

Autotransporter adhesin AidA [Cell wall/membrane/envelope biogenesis, Intracellular trafficking, secretion, and vesicular transport];


Pssm-ID: 442691 [Multi-domain]  Cd Length: 846  Bit Score: 39.93  E-value: 4.57e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966513659 114 VASANTVVGNGSITIDFGTYSSDLSTFTANPDKQSVTINIAPGQNTLQAIRDAINANGSGVKAAIVQDSQGARLTLSSPD 193
Cdd:COG3468   67 GGGAGSGGGLAGAGSGGTGGNSTGGGGGNSGTGGTGGGGGGGGSGNGGGGGGGGGGGGTGGGGGGGTGSAGGGGGGGGGG 146

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966513659 194 TGKNLAMKISVNDADGNNTNGAGLSALAYD----PTAGITNAQETVAARDSEIKINGLTLTQSTNQYKDALAGVTIDLRK 269
Cdd:COG3468  147 TGVGGTGAAAAGGGTGSGGGGSGGGGGAGGggggGAGGSGGAGSTGSGAGGGGGGSGGGGGAAGTGGGGGGGGGAGGATG 226

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966513659 270 ADLGTTYSLTIENNKAQLTGFVNEFIKQFNEAMTTLNNLTGYNKETKQGGLLQGDASTRNLKLSISKILSQPIDTGDSAI 349
Cdd:COG3468  227 GAGSGGNTGGGVGGGGGSAGGTGGGGLTGGGAAGTGGGGGGTGTGSGGGGGGGANGGGSGGGGGASGTGGGGTASTGGGG 306

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966513659 350 NSLADIGIKTDAKGLLTLNTADFDAAVNDHYGAIGNLFAKTAVASDSNVRIKSVGADVKAGSYAINITSFTAGVTLAGTI 429
Cdd:COG3468  307 GGGGGNGGGGGGGSNAGGGSGGGGGGGGGGGGGGTTLNGAGSAGGGTGAALAGTGGSGSGGGGGGGSGGGGGAGGGGANT 386

                        330       340       350       360       370       380
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 966513659 430 GGLSATSSDGLTLKGSGALKNLSIQVIGGSTGDRGSVVVSDgiaaqlnnlvtDYLGDKGDLANRT 494
Cdd:COG3468  387 GSDGVGTGLTTGGTGNNGGGGVGGGGGGGLTLTGGTLTVNG-----------NYTGNNGTLVLNT 440
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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