|
Name |
Accession |
Description |
Interval |
E-value |
| CirA |
COG1629 |
Outer membrane receptor protein, Fe transport [Inorganic ion transport and metabolism]; |
43-737 |
8.20e-84 |
|
Outer membrane receptor protein, Fe transport [Inorganic ion transport and metabolism];
Pssm-ID: 441236 [Multi-domain] Cd Length: 644 Bit Score: 279.40 E-value: 8.20e-84
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 972326200 43 LDALQVTAQRRVENAKDVPVALSAIQGEKLDVLGsaGDDIRFLAARVPSLNIESSYGRAfPRFYIRGLGNtdfdlnASQP 122
Cdd:COG1629 1 LEEVVVTATRTDESLQDVPGSVSVISREQLEDQP--ATDLGDLLRRVPGVSVTSAGGGA-GQISIRGFGG------GGNR 71
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 972326200 123 VSLVYDDVVQESPL-----LKGFPLFDLANVEVLRGPQGTLFGRNTPAGVVKFDSARPSQDADGYLRVGYGSYNSWNVQG 197
Cdd:COG1629 72 VLVLVDGVPLNDPSggdggLSYIDPEDIERVEVLRGPSSALYGSGALGGVINIVTKKPKDGKGGEVSASYGSYGTYRASL 151
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 972326200 198 AYGGPlTDRWSARVSAIYQRRDDWVDNTRvgapnsgfegYDEAAGRVQFLYEGDD---FEALFNLHKRKLNGTARLFRAN 274
Cdd:COG1629 152 SLSGG-NGKLAYRLSASYRDSDGYRDNSD----------SDRYNLRAKLGYQLGDdtrLTLSASYSDSDQDSPGYLTLAA 220
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 972326200 275 IIQKGGNSLVENFDRDkvandgvNFSDLETWGGSARLQWNLGS--VTLHSITGYetaeSLNRGDIDGGYGAAFLGAGNYg 352
Cdd:COG1629 221 LRPRGAMDDGTNPYSN-------DTDDNTRDRYSLSLEYEHLGdgLKLSASAYY----RYDDTDLDSDFTPTPADGGTL- 288
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 972326200 353 pglipfssesADGLPHHRQWTQEVRIESNE--WGRFDWQAGVFYFDEDVTINNFNYDSLTPGNPQTGHVV-QNQRNKAWA 429
Cdd:COG1629 289 ----------EQTDFDNRTYGLELRLTYDLgfGGKHTLLVGLDYQRQDLDGSGYPLDLGSGSLPTLTSGAdDDGTTTSLA 358
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 972326200 430 VFASGDFDVTDRFKLRAGVRYTQDKKDFSasvlqavpfgTPVSGPYLANTDVND--VSWDVSGVYKLTDDINAYARVAKG 507
Cdd:COG1629 359 LYAQDTYKLTDKLTLTAGLRYDYVSYDVD----------DTVTGTDSASGSRSYsaFSPSLGLTYQLSPNLSLYASYSRG 428
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 972326200 508 FRAPSIQ-----GRLAFAPGLSQADSEKVISYEAGIKADLFERRARLGLSVFRYNVDGQQL--IAVGGANNTATLLNADK 580
Cdd:COG1629 429 FRAPTFGelyanGTDPYSVGNPDLKPETSTNYELGLRYRLLDGRLSLSLALFYSDVDNEILsvPLPNDSGFSTYYTNAGK 508
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 972326200 581 TIGQGVELDLEAYLADNVLLTFGSSYNDTEIKDknlavaicgggctindpttviNGGTYALVNGNPLPQAPKWIHNATLR 660
Cdd:COG1629 509 ARSYGVELELSYQLTPGLSLNASYSYTDAKFDD---------------------DTDGSADLDGNRLPGVPPLTANLGLT 567
|
650 660 670 680 690 700 710
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 972326200 661 VGFPlsdgSELYAYTDWAYRSAVNFFIYESPEFRGRSSLeGGLRLGYNWDyGQYDVAVFGRNLTNQTRVVGAIDFNN 737
Cdd:COG1629 568 YEFP----GGWSLGLGVRYVGDRYLDDANTQGAPGGYTL-VDLGAGYRFG-DNLTLSLGVDNLFDKKYATSLSVRAS 638
|
|
| ligand_gated_channel |
cd01347 |
TonB dependent/Ligand-Gated channels are created by a monomeric 22 strand (22,24) ... |
80-756 |
7.91e-46 |
|
TonB dependent/Ligand-Gated channels are created by a monomeric 22 strand (22,24) anti-parallel beta-barrel. Ligands apparently bind to the large extracellular loops. The N-terminal 150-200 residues form a plug from the periplasmic end of barrel. Energy (proton-motive force) and TonB-dependent conformational alteration of channel (parts of plug, and loops 7 and 8) allow passage of ligand. FepA residues 12-18 form the TonB box, which mediates the interaction with the TonB-containing inner membrane complex. TonB preferentially interacts with ligand-bound receptors. Transport thru the channel may resemble passage thru an air lock. In this model, ligand binding leads to closure of the extracellular end of pore, then a TonB-mediated signal facillitates opening of the interior side of pore, deforming the N-terminal plug and allowing passage of the ligand to the periplasm. Such a mechanism would prevent the free diffusion of small molecules thru the pore.
Pssm-ID: 238657 [Multi-domain] Cd Length: 635 Bit Score: 173.79 E-value: 7.91e-46
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 972326200 80 DDIRFLAARVPSLNIESSYGRAFPRFYIRGLG--NTDFDLNAsqpVSLVYDDVVQESPLLKgFPLFDLANVEVLRGPQGT 157
Cdd:cd01347 16 TSLADLLRRIPGVSVTRGGGGGGSTISIRGFGpdRTLVLVDG---LPLASSNYGRGVDLNT-IPPELIERVEVLKGPSSA 91
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 972326200 158 LFGRNTPAGVVKFDSARPSQDADGYLRVGYGSYNSWNVQGA---YGGPLT--DRWSARVSAIYQRRDDWVDntRVGAPNS 232
Cdd:cd01347 92 LYGSGAIGGVVNIITKRPTDEFGGSVTAGYGSDNSGSSGGGgfdVSGALAddGAFGARLYGAYRDGDGTID--GDGQADD 169
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 972326200 233 GFEGYDEAAGRVQF-LYEGDDFEALFNLHKRKLNGTarlFRANIIQKGGNSLVENFDRDKVANDGVNFSDLETWGGSARL 311
Cdd:cd01347 170 SDEERYNVAGKLDWrPDDDTRLTLDAGYQDQDADGP---GGTLPANGTGSSLGGGPSSNTNGDRDWDYRDRYRKRASLGL 246
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 972326200 312 --QWNLGSVTLHSITGYETAESLNRGDIDGGYGAAflgagNYGPGLIPFSSESADglphHRQWTQEVRIESN---EWGRF 386
Cdd:cd01347 247 ehDLNDTGWTLRANLSYSYTDNDGDPLILNGGNNA-----AGGDLGRSGYSSERD----TTQLGFDAGLNAPfgtGPVAH 317
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 972326200 387 DWQAGVFYFDEDVTINNfnydsltpgnpqtghvvqnqrnkaWAVFASGDFDVTDRFKLRAGVRYtqDKKDFSASVLQAVP 466
Cdd:cd01347 318 TLTLGVEYRREELDEKQ------------------------TALYAQDTIELTDDLTLTLGLRY--DHYDQDSKDTIAGG 371
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 972326200 467 FGTPVSGpylantdvNDVSWDVSGVYKLTDDINAYARVAKGFRAPSIQGRLAFAPGLSQA-------DSEKVISYEAGIK 539
Cdd:cd01347 372 TTAKKSY--------SHWSPSLGLVYKLTDGLSLYASYSQGFRAPSLGELYGGGSHGGTAavgnpnlKPEKSKQYELGLK 443
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 972326200 540 ADlFERRARLGLSVFRYNVDG--QQLIAVGGANNTATLLNADKTIGQGVELDLEAYLADNVLLTFGSSYNDTEIKDknla 617
Cdd:cd01347 444 YD-PGDGLTLSAALFRIDIKNeiVSTPTNTGLGLVTVYVNGGKARIRGVELEASYDLTDGLGLTGSYTYTDTEVKR---- 518
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 972326200 618 vaicgggctindpttvinggTYALVNGNPLPQAPKWIHNATLRVGFPLSDgseLYAYTDWAYRSAVN---FFIYESPEFR 694
Cdd:cd01347 519 --------------------TDGATTGNRLPGIPKHTANLGLDYELPDEG---LTAGGGVRYRGKQYadtANGNNTVKVP 575
|
650 660 670 680 690 700
....*....|....*....|....*....|....*....|....*....|....*....|...
gi 972326200 695 GRSSLegGLRLGYNWDYGqYDVAVFGRNLTNQTRV-VGAIDFNNLTGFLNEPRTWGVEFTAKF 756
Cdd:cd01347 576 GYTLV--DLSASYQFTKN-LTLRLGVNNLFDKDYYtSLSVRGSGLYGYYGPGRTYYLSVSYKF 635
|
|
| TonB-siderophor |
TIGR01783 |
TonB-dependent siderophore receptor; This subfamily model encompasses a wide variety of ... |
59-756 |
2.28e-27 |
|
TonB-dependent siderophore receptor; This subfamily model encompasses a wide variety of TonB-dependent outer membrane siderophore receptors. It has no overlap with TonB receptors known to transport other substances, but is likely incomplete due to lack of characterizations. It is likely that genuine siderophore receptors will be identified which score below the noise cutoff to this model at which point the model should be updated. [Transport and binding proteins, Cations and iron carrying compounds, Transport and binding proteins, Porins]
Pssm-ID: 273805 [Multi-domain] Cd Length: 651 Bit Score: 117.90 E-value: 2.28e-27
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 972326200 59 DVPVALSAIQGEKLDVLGsaGDDIRFLAARVPS-LNIESSYGRAFPRFYIRGLGNTDFDLNA---SQPVSLVYDDVVQes 134
Cdd:TIGR01783 1 DIPQSVSVITRQELEDQQ--AGSLSEALQRVPGvVVGGSGGTTQFGNITIRGFGLEVDIDNVyldGVPLLSRGNLAIV-- 76
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 972326200 135 pllkgfPLFDLANVEVLRGPQGTLFGRNTPAGVVKFDSARPSQDADGYLRVGYGSYNSWNVQGAYGGPLTD--RWSARVS 212
Cdd:TIGR01783 77 ------DPAMVERVEVLRGPASLLYGGSAPGGVINIVTKRPQDEPKGSVTFGAGTRSGYRTAFDLGGPLGAdgTFRGRLN 150
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 972326200 213 AIYQRRDDWVDN----TRVGAPNSGFEgydeAAGRVQFLYEGDDfealfnLHKRKLNGTARLFRANIIQkgGNSLVENFD 288
Cdd:TIGR01783 151 GARQDGDSFYDGageeTRLGATATDWQ----LDDRTLLRLGAYY------QKERDRGGYGGLPASGGTS--GRDLSSDRY 218
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 972326200 289 RDKVANDGVNfsDLETWGGSARLQWNLGSVtlhsITGYETAESLnRGDIDGG--YGAAFLGAGNYGPGLIPFSSESADGL 366
Cdd:TIGR01783 219 LGTSSNRNYD--DREYLSYGLSLEYQFNDV----WTGKQNLRYS-YFDTDSNqvQASGYSSDGGLFGRSLTVVNVKQDRV 291
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 972326200 367 PHHRQWTQEVRIESNE----WGRFDWQAGVFYF--DEDVTINNFNYDSLTPGNPQTGHVVQNQRN----KAWAVFASGDF 436
Cdd:TIGR01783 292 QIDAGLDGEFETGPIEhdllLGVSYGQRTTNRFnnTGYPSDNIYSLTATSSARTDIGDSPKDRALssttKALNGVALQRI 371
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 972326200 437 DVTDRFKLRAGVRYTQDKKDFSASVlqavpFGTPVSgpylanTDVNDVSWDVSGVYKLTDDINAYARVAKGFRAPSIQGR 516
Cdd:TIGR01783 372 LLADKWTLTLGGRYDSVDVKSNNGV-----AGSTGK------RDDSQFTPSLGVAYKPTDDWSLYASYAESFKPGGYYPK 440
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 972326200 517 LAfAPGLSQADSEKVISYEAGIKADlFERRARLGLSVFRYNVDGQqliAVGGANNTATLLNADKTIGQGVELDLEAYLAD 596
Cdd:TIGR01783 441 GA-GNSGDILEPEKGKNYELGVRYD-LGDSLLATAALFRITKDNQ---LVQDPVNGTFSVNAGKTRNRGVELEARGYLTP 515
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 972326200 597 NVLLTFGSSYNDTEIKDKNlavaicgggctindpttviNGGTYalvnGNPLPQAPKwiHNATLRVGFPLSDGSELYAYTd 676
Cdd:TIGR01783 516 GLSLSAGYTYTDAEFTEDT-------------------NGDTQ----GNTVPFVPK--HTASLWASYAPPVGDNGLTLG- 569
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 972326200 677 WAYRSAVNFFIYESPEFRGRSSLEGGLRLGYNWDYGQYDVAVFG-RNLTNQTRVVGAIDFNNLTG-FLNEPRTWGVEFTA 754
Cdd:TIGR01783 570 GGVQYTGKAYVDGGNTGKVPSYTVVDLSVRYDLTKKKNLTLALNvNNLFDRDYYTSGYRWGPSAYiYPGAPRTVGLSVSY 649
|
..
gi 972326200 755 KF 756
Cdd:TIGR01783 650 DF 651
|
|
| TonB_dep_Rec |
pfam00593 |
TonB dependent receptor; This model now only covers the conserved part of the barrel structure. |
279-755 |
1.26e-22 |
|
TonB dependent receptor; This model now only covers the conserved part of the barrel structure.
Pssm-ID: 395474 [Multi-domain] Cd Length: 475 Bit Score: 102.16 E-value: 1.26e-22
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 972326200 279 GGNSLVENFDRDKVANDGVNFSDLETWGGSARLQWNLGSvTLHSITGYETAESLNRGDIDGGYgaaflgAGNYGPGLIPF 358
Cdd:pfam00593 35 DGYGNDGGYLGDRPLYYGRDYSDTDRKRLSLGYDYDLGD-GLSWLSTLRLGLRYSSLDGDYTS------NSSGLSGAGDY 107
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 972326200 359 SSESADGLPHHRQWTQEVRIESNewgrFDWQAGVFYFDEDVTINNFNYDSLTPGNPQTGHVVQ--NQRNKAWAVFASGDF 436
Cdd:pfam00593 108 LSDDRLYGLYGLDGDLELSLDLS----HDLLLGVELRTAGLDYRRLDDDAYDPYDPANPSSSSysDTTTDSYGLYLQDNI 183
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 972326200 437 DVTDRFKLRAGVRYTQDKKDFSASVLQAVPFgtpvsgpylaNTDVNDVSWDVSGVYKLTDDINAYARVAKGFRAPSIQGR 516
Cdd:pfam00593 184 KLTDRLTLTLGLRYDHYSTDGDDGNGGGDNF----------SRSYSAFSPRLGLVYKPTDNLSLYASYSRGFRAPSLGEL 253
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 972326200 517 LAFAPGLSQA---------DSEKVISYEAGIKadLFERRARLGLSVFRYNVDGQQL---IAVGGANNTATLLNADKTIGQ 584
Cdd:pfam00593 254 YGSGSGGGGGavaggnpdlKPETSDNYELGLK--YDDGRLSLSLALFYIDIKNLITsdpDGPGLGGTVYTYTNVGKARIR 331
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 972326200 585 GVELDLEAYLADnvLLTFGSSYNDTEIKDKNLAVAicgggctindpttvinggtyalvNGNPLPQAPKWIHNATLRVGFP 664
Cdd:pfam00593 332 GVELELSGRLWG--LGLSGGGYTYTDADDDADADD-----------------------TGNPLPNVPRHTANLGLTYDFP 386
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 972326200 665 LSDgseLYAYTDWAYRSAVNFFIYESPE-FRGRSSLEGGLRLGYNWDYgQYDVAVFGRNLTNQT-RVVGAIDFNNLTGFL 742
Cdd:pfam00593 387 LGG---WGARLGARYVGSGERRYGDAANtFKTPGYTLVDLSAGYRLNK-NLTLRLGVNNLFDKYyKRYYSSGGGNLGGYP 462
|
490
....*....|...
gi 972326200 743 NEPRTWGVEFTAK 755
Cdd:pfam00593 463 GPGRTFYLGLSYK 475
|
|
| PRK13483 |
PRK13483 |
ligand-gated channel protein; |
14-659 |
2.07e-12 |
|
ligand-gated channel protein;
Pssm-ID: 184080 [Multi-domain] Cd Length: 660 Bit Score: 70.57 E-value: 2.07e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 972326200 14 ARPLVAALSALLPLVAAAQETPAAKDPVALDALQVTAQRRVENAKDVPVALSAIQGEKLDvlGSAGDDIRFLAARVPSLN 93
Cdd:PRK13483 4 YLAQVISALCLLPAVFVTHALAQAAPDKTMETVVVTASGYEQQIRDAPASISVITREDLE--NRFYRDLTDALLDVPGVV 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 972326200 94 IESSYGRAfpRFYIRGLGNtDFDL----------NASQPVSlvyddvvqESPLLKGF---PLFDLANVEVLRGPQGTLFG 160
Cdd:PRK13483 82 VTGGGDRT--DISLRGMGS-QYTLilvdgkrqssRETRPNS--------DGPGVEQAwtpPLAAIERIEVIRGPMSSLYG 150
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 972326200 161 RNTPAGVVKFDSARPSQDADGYLRVG---YGSYNSWNVQGA---YGGPL-TDRWSARVSAIYQRRDDwvDNTrvgapNSG 233
Cdd:PRK13483 151 SDAIGGVINIITRKVPNEWQGEVRLDttlQENSDSGNVYQAnffVNGPLiKDLLGLQLYGQYTQREE--DDI-----EGG 223
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 972326200 234 FEGYDEAAGRVQFLYE-GDDFEALFNLhkrklnGTARLFRANIIQKGGNSLV--ENFDRDKVANDGVNFSDLETWGGSAR 310
Cdd:PRK13483 224 YRDKDARSLTAKLALTpNEDHDIMLEV------GTSNQERDSTVGKTVAPLApgESCGRRGCPESSTTEYERSTVSLSHT 297
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 972326200 311 LQWNLGSVtlHSITGYETAESLNRgdidggygaaflgagnygpglipfsSESADGLPHHRQWTQEVRIESNewgrfdWQA 390
Cdd:PRK13483 298 GRWDFGTS--DTYIQHEEFDNKSR-------------------------EMKIKNTDFQSSLVAPLGQEHT------LTF 344
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 972326200 391 GVFYFDEDVTinnfnydsltpgnPQTGHVVQNQ---RNKAWAVFASGDFDVTDRFKLRAGVRYTQDKKdfsasvlqavpF 467
Cdd:PRK13483 345 GAAYNHQDLT-------------DETSNQISDLtdiSRTQWAVFSEDEWRIADDFALTGGLRLDHDEN-----------F 400
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 972326200 468 GTPVSgPylantdvndvswDVSGVYKLTDDINAYARVAKGFRAPSIQgrlAFAPGLSQA------------DSEKVISYE 535
Cdd:PRK13483 401 GGHVS-P------------RVYGVWNLAPSWTVKGGVSTGFRAPSLR---QTTPDWGQVsrggniygnpdlKPETSLNKE 464
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 972326200 536 AGIKADLFERRArLGLSVFrYN--------VDGQQLIAVGGAN----NTATLLNADKTIGQGVELDLEAYLADNVLLTFG 603
Cdd:PRK13483 465 LGLYYDLGSGLT-ASLTVF-YNefkdkitrVACPATQCTDGPNqfgaDPTTYVNIDEAVTQGVEASLSYPITSTLSLSGN 542
|
650 660 670 680 690
....*....|....*....|....*....|....*....|....*....|....*.
gi 972326200 604 SSYNDTEIKDknlavaicgggctindpttvingGTYAlvnGNPLPQAPKWIHNATL 659
Cdd:PRK13483 543 YTYTDSEQKS-----------------------GAYK---GSPLNQLPKHLFQASL 572
|
|
| |
|
Name |
Accession |
Description |
Interval |
E-value |
| CirA |
COG1629 |
Outer membrane receptor protein, Fe transport [Inorganic ion transport and metabolism]; |
43-737 |
8.20e-84 |
|
Outer membrane receptor protein, Fe transport [Inorganic ion transport and metabolism];
Pssm-ID: 441236 [Multi-domain] Cd Length: 644 Bit Score: 279.40 E-value: 8.20e-84
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 972326200 43 LDALQVTAQRRVENAKDVPVALSAIQGEKLDVLGsaGDDIRFLAARVPSLNIESSYGRAfPRFYIRGLGNtdfdlnASQP 122
Cdd:COG1629 1 LEEVVVTATRTDESLQDVPGSVSVISREQLEDQP--ATDLGDLLRRVPGVSVTSAGGGA-GQISIRGFGG------GGNR 71
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 972326200 123 VSLVYDDVVQESPL-----LKGFPLFDLANVEVLRGPQGTLFGRNTPAGVVKFDSARPSQDADGYLRVGYGSYNSWNVQG 197
Cdd:COG1629 72 VLVLVDGVPLNDPSggdggLSYIDPEDIERVEVLRGPSSALYGSGALGGVINIVTKKPKDGKGGEVSASYGSYGTYRASL 151
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 972326200 198 AYGGPlTDRWSARVSAIYQRRDDWVDNTRvgapnsgfegYDEAAGRVQFLYEGDD---FEALFNLHKRKLNGTARLFRAN 274
Cdd:COG1629 152 SLSGG-NGKLAYRLSASYRDSDGYRDNSD----------SDRYNLRAKLGYQLGDdtrLTLSASYSDSDQDSPGYLTLAA 220
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 972326200 275 IIQKGGNSLVENFDRDkvandgvNFSDLETWGGSARLQWNLGS--VTLHSITGYetaeSLNRGDIDGGYGAAFLGAGNYg 352
Cdd:COG1629 221 LRPRGAMDDGTNPYSN-------DTDDNTRDRYSLSLEYEHLGdgLKLSASAYY----RYDDTDLDSDFTPTPADGGTL- 288
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 972326200 353 pglipfssesADGLPHHRQWTQEVRIESNE--WGRFDWQAGVFYFDEDVTINNFNYDSLTPGNPQTGHVV-QNQRNKAWA 429
Cdd:COG1629 289 ----------EQTDFDNRTYGLELRLTYDLgfGGKHTLLVGLDYQRQDLDGSGYPLDLGSGSLPTLTSGAdDDGTTTSLA 358
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 972326200 430 VFASGDFDVTDRFKLRAGVRYTQDKKDFSasvlqavpfgTPVSGPYLANTDVND--VSWDVSGVYKLTDDINAYARVAKG 507
Cdd:COG1629 359 LYAQDTYKLTDKLTLTAGLRYDYVSYDVD----------DTVTGTDSASGSRSYsaFSPSLGLTYQLSPNLSLYASYSRG 428
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 972326200 508 FRAPSIQ-----GRLAFAPGLSQADSEKVISYEAGIKADLFERRARLGLSVFRYNVDGQQL--IAVGGANNTATLLNADK 580
Cdd:COG1629 429 FRAPTFGelyanGTDPYSVGNPDLKPETSTNYELGLRYRLLDGRLSLSLALFYSDVDNEILsvPLPNDSGFSTYYTNAGK 508
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 972326200 581 TIGQGVELDLEAYLADNVLLTFGSSYNDTEIKDknlavaicgggctindpttviNGGTYALVNGNPLPQAPKWIHNATLR 660
Cdd:COG1629 509 ARSYGVELELSYQLTPGLSLNASYSYTDAKFDD---------------------DTDGSADLDGNRLPGVPPLTANLGLT 567
|
650 660 670 680 690 700 710
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 972326200 661 VGFPlsdgSELYAYTDWAYRSAVNFFIYESPEFRGRSSLeGGLRLGYNWDyGQYDVAVFGRNLTNQTRVVGAIDFNN 737
Cdd:COG1629 568 YEFP----GGWSLGLGVRYVGDRYLDDANTQGAPGGYTL-VDLGAGYRFG-DNLTLSLGVDNLFDKKYATSLSVRAS 638
|
|
| FepA |
COG4771 |
Outer membrane receptor for ferrienterochelin and colicins [Inorganic ion transport and ... |
18-695 |
1.61e-56 |
|
Outer membrane receptor for ferrienterochelin and colicins [Inorganic ion transport and metabolism];
Pssm-ID: 443803 [Multi-domain] Cd Length: 612 Bit Score: 203.93 E-value: 1.61e-56
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 972326200 18 VAALSALLPLVAAAQETPAAK-DPVALDALQVTAQRRVENAKDVPVALSAIQGEKLDVLGSAgdDIRFLAARVPSLNIES 96
Cdd:COG4771 1 LLLASLLLLLALAAQAADALAeDATELEEVVVTATRTEQSLSDAPASVSVITAEEIEKLGAT--DLADALRLLPGVSVTR 78
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 972326200 97 SYGRAF-PRFYIRGLGntdfdlnaSQPVSLVYDDVVQESPLLKG------FPLFDLANVEVLRGPQGTLFGRNTPAGVVK 169
Cdd:COG4771 79 SGGRGGsSGISIRGLG--------GDRVLVLIDGVPVNNPALGGggdlsyIPPDDIERIEVIRGPASALYGSDAIGGVIN 150
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 972326200 170 FDSARPSQDADGYLRVGYGSYN--SWNVQGAYGGPlTDRWSARVSAIYQRRDDWVDNTRVGApnSGFEGYDEAAGRVQFL 247
Cdd:COG4771 151 IITKKPTDELEGSVSLGYGSNGngTYSGSLSLGGP-GDKLSFLLSGSYRDRDGYLDYRNGGF--VGNSGYERYNLNAKLG 227
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 972326200 248 YEGDDfealfnlhKRKLNGTARLFRANIIQKGGNSLVENFDRDKVANDGVNFsdlETWGGSARLQWNLGSvTLHSITGYe 327
Cdd:COG4771 228 YRLSD--------NHRLSLSGGYSRQDRDGGPPTLGDTEISSDNAGDRDTTT---DRGNYSLRYNGDLGD-NLDLSLYY- 294
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 972326200 328 taeslNRGDIDGGYGAAFLGAGNYGPglipfssesadglPHHRQWTQEVRIESNEWGRFDWQAGVFYFDEDVTINNFNYD 407
Cdd:COG4771 295 -----SRTDRDSTNGSLGGSTGSFSD-------------SDDTTYGLELDLTYPLGGNHTLTLGAEYRYDDLDSSSFLGG 356
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 972326200 408 SltpgnpqtghvvqNQRNKAWAVFASGDFDVTDRFKLRAGVRYTQDKkdfsasvlqavpfgtpvsgpYLANTDVNDVSWD 487
Cdd:COG4771 357 A-------------DASRDTYGLFAQDEWKLTDKLTLTAGLRYDYYS--------------------TFGASNYTAFSPR 403
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 972326200 488 VSGVYKLTDDINAYARVAKGFRAPSIQGRLAFAPGLSQA--------DSEKVISYEAGIKADLFERRARLGLSVFRYNVD 559
Cdd:COG4771 404 LGLRYDLSDNLTLRASYGRGFRAPSLAELYGSGTGTPGRyvlgnpdlKPETSDNYELGLEYRLGNGGLSLSLTGFYTDIK 483
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 972326200 560 GQQL--IAVGGANNTATLLNADKTIGQGVELDLEAYLADNVLLTFGSSYNDTEIKDKNlavaicgggctindpttvingg 637
Cdd:COG4771 484 DLIVlvPVGPGPGDVLQYENVGKARTYGLELELKYRLGKGLTLTASYTYLDSKIDDGD---------------------- 541
|
650 660 670 680 690
....*....|....*....|....*....|....*....|....*....|....*...
gi 972326200 638 tyalvNGNPLPQAPKwiHNATLRVGFPLSDGSELYAYTDWAYRSAVNFFIYESPEFRG 695
Cdd:COG4771 542 -----TGEPLPNVPP--HKANLGLDYRLPKWWLLLLLTRYYGGRYVTPPSGRLEGYTP 592
|
|
| Fiu |
COG4774 |
Outer membrane receptor for monomeric catechols [Inorganic ion transport and metabolism]; |
89-756 |
2.93e-55 |
|
Outer membrane receptor for monomeric catechols [Inorganic ion transport and metabolism];
Pssm-ID: 443806 [Multi-domain] Cd Length: 639 Bit Score: 200.87 E-value: 2.93e-55
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 972326200 89 VPSLNIESSYGRAFPRFYIRGlgntdFDLNASQPVSLVYDDVVQEspllkgFPLFDLANVEVLRGPQGTLFGRNTPAGVV 168
Cdd:COG4774 36 VPGVTFGAGEGGNGDSFSIRG-----FSASGDIYVDGLRDPGQYR------RDTFNLERVEVLKGPASVLYGRGSPGGVI 104
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 972326200 169 KFDSARPSQDADGYLRVGYGSYNSWNVQGAYGGPLTDRWSARVSAIYQRRDDWVDNTRvgapnsgfegYDEAAGRVQFLY 248
Cdd:COG4774 105 NLVTKRPTDEPFTEVTLTYGSDGQRRATLDVNGPLGDDLAYRLNGMYRDSDSYRDGVD----------NDRWGIAPSLTW 174
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 972326200 249 E-GDDFEALFNLHKRKLNGTARLFraniIQKGGNSLVENFDRDKVANDGVNFSDLETWGGSARLQWNLGS-VTLHSITGY 326
Cdd:COG4774 175 RlGDRTRLTLDYEYQDDDRTPDYG----VPAVANGRPVDVDRSTFYGQPDDYSDSETDSATLRLEHDFNDnWTLRNALRY 250
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 972326200 327 ETAESlnrgDIDGGYGAAFLGAGNYGPGLIPFSSESadglphhRQWTQEVRIESN-EWGRF--DWQAGVFYFDEDVTINN 403
Cdd:COG4774 251 SDYDR----DYRNTYPTGGNATGTVTRSAYRRDQDN-------DTLSNQTDLTGKfDTGGVkhTLLAGVEYSREDSDNAR 319
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 972326200 404 FNY----DSLTPGNPQTGHVV---------QNQRNKAWAVFASGDFDVTDRFKLRAGVRYTQDKKDFSasvlqavpfgTP 470
Cdd:COG4774 320 YSGggtaPTVNLYNPVYGAPVtgptlggadNDSRTDTTGLYLQDTISLTDRWSLLAGLRYDRFDTDYT----------DR 389
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 972326200 471 VSGPYLANTDVNDVSWDVSGVYKLTDDINAYARVAKGFRAPSiqGRLAFAPGLSQADSEKVISYEAGIKADLFERRARLG 550
Cdd:COG4774 390 TTGATTSSYDDSAFSPRAGLVYKPTPNLSLYASYSTSFNPGG--GAPSLSNAGQALDPEKSRQYEVGVKWDLLDGRLSLT 467
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 972326200 551 LSVFRYNvdgQQLIAVGGANNTATLLNADKTIGQGVELDLEAYLADNVLLTFGSSYNDTEIKDknlavaicgggctindp 630
Cdd:COG4774 468 AALFRIE---KTNVRTTDPANPGVYVQTGEQRSRGVELEATGELTPGWSVLAGYTYLDAEITK----------------- 527
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 972326200 631 ttvingGTYALVNGNPLPQAPKWIHNATLRVGFPLSD---GSELYaYTDWAYRSAVNFFiyespefrgrsSLEG----GL 703
Cdd:COG4774 528 ------SANAANVGNRLPNVPRHSASLWTTYDLPLPGltlGGGVR-YVGSRYADAANTV-----------KLPSytrfDA 589
|
650 660 670 680 690
....*....|....*....|....*....|....*....|....*....|...
gi 972326200 704 RLGYNWDyGQYDVAVFGRNLTNQTRVVGAIDFNNLTgfLNEPRTWGVEFTAKF 756
Cdd:COG4774 590 GASYRLN-KNLTLRLNVNNLTDKRYYASAYGSGYVT--PGAPRTVLLSASYRF 639
|
|
| FhuE |
COG4773 |
Outer membrane receptor for ferric coprogen and ferric-rhodotorulic acid [Inorganic ion ... |
18-756 |
6.49e-55 |
|
Outer membrane receptor for ferric coprogen and ferric-rhodotorulic acid [Inorganic ion transport and metabolism];
Pssm-ID: 443805 [Multi-domain] Cd Length: 692 Bit Score: 200.89 E-value: 6.49e-55
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 972326200 18 VAALSALLPLVAAAQETPAAKDPVALDALQVTAQRRVENA----------------KDVPVALSAIQGEKLDVLGSagDD 81
Cdd:COG4773 7 GSGLAAAAAGALAQAAAAAAAEATTLPEVTVTGTAEGTGGytakssstatkldtplRETPQSVSVVTRQLIEDQGA--TT 84
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 972326200 82 IRFLAARVPSLNIESSYGRAFPRFYIRGlgntdFDLNASQpvslvYDDVVQESPLLKGFPLFDLANVEVLRGPQGTLFGR 161
Cdd:COG4773 85 LDDALRNVPGVTVSSYDGGGRDSFSIRG-----FSIDNYL-----RDGLPLGGFGGGQPDTANLERVEVLKGPAGLLYGA 154
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 972326200 162 NTPAGVVKFDSARPSQDADGYLRVGYGSYNSWNVQGAYGGPLTD--RWSARVSAIYQRRDDWVDNTRvgapnsgfegyde 239
Cdd:COG4773 155 GSPGGLVNLVTKRPTAEPQGEVSLSAGSWDTYRATADVGGPLNEdgTLRYRLNAAYEDGDSFRDGVD------------- 221
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 972326200 240 aaGRVQFLY--------EGDDFEALFNLHKRKLNGTARLFRANiiqkgGNSLveNFDRDKVANDGVNFSDLETWGGSARL 311
Cdd:COG4773 222 --NRRTLIApsldwdltDDTTLTLGAEYQDDDSTGDRGFLPLD-----GTLL--DLPRSTNLGEPWDYYDTETTTLFAEL 292
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 972326200 312 QWNLGS-VTLHSITGYetaeslNRGDIDgGYGAAFLGAGNYGPGLIPFSSESADGlpHHRQWTQEVRIEsnewGRFDW-- 388
Cdd:COG4773 293 EHRFNDdWSLRANARY------SDSDRD-GRSAYAYGAPDAATGTLTRYASARDG--DSRSDSLDANLN----GKFETgg 359
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 972326200 389 -----QAGVFYFDEDVTINNFNYDSLTPGNPQTGHVV--------QNQRNKAWAVFASGDFDVTDRFKLRAGVRYTQDKK 455
Cdd:COG4773 360 lehtlLVGADYSRYDSDSDSATAGTINIYNPVYGNLPepdfdasdTDTTTRQTGLYAQDQISLTDRLSLLLGGRYDWYET 439
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 972326200 456 DfsasvlqavpfGTPVSGPYLANTDVNDVSWDVSGVYKLTDDINAYARVAKGFRAPSIQGRL--AFAPGLSQadsekviS 533
Cdd:COG4773 440 D-----------STNRLGGSTTSYDDSAFTPRAGLVYDLTPGLSLYASYSESFEPQSGADNNgnPLDPETGK-------Q 501
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 972326200 534 YEAGIKADLFERRARLGLSVFRYNVDGqqlIAVGGANNTATLLNADKTIGQGVELDLEAYLADNVLLTFGSSYNDTEIKD 613
Cdd:COG4773 502 YEAGVKGELFDGRLNATLAVFDITQKN---VATTDPDNPNFYVQVGEVRSRGVELELSGELTPGLNLIAGYTYTDAKITK 578
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 972326200 614 KNlavaicgggctindpttvinggtyALVNGNPLPQAPKWIHNATLRVGFPLSDGSELYA-----YTDWAYRSAVNffiy 688
Cdd:COG4773 579 DA------------------------DALEGKRLTNVPRHTASLWTTYRFPSGALKGLGLgggvrYVGERYGDAAN---- 630
|
730 740 750 760 770 780
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 972326200 689 espEFRGRSSLEGGLRLGYNWDYgQYDVAVFGRNLTNQTRVVGAidFNNLTGFLNEPRTWGVEFTAKF 756
Cdd:COG4773 631 ---TFTLPSYTLVDAGARYDLGK-NWTLQLNVNNLFDKKYYASS--GSRGYVYYGAPRNVRLSLSYKF 692
|
|
| ligand_gated_channel |
cd01347 |
TonB dependent/Ligand-Gated channels are created by a monomeric 22 strand (22,24) ... |
80-756 |
7.91e-46 |
|
TonB dependent/Ligand-Gated channels are created by a monomeric 22 strand (22,24) anti-parallel beta-barrel. Ligands apparently bind to the large extracellular loops. The N-terminal 150-200 residues form a plug from the periplasmic end of barrel. Energy (proton-motive force) and TonB-dependent conformational alteration of channel (parts of plug, and loops 7 and 8) allow passage of ligand. FepA residues 12-18 form the TonB box, which mediates the interaction with the TonB-containing inner membrane complex. TonB preferentially interacts with ligand-bound receptors. Transport thru the channel may resemble passage thru an air lock. In this model, ligand binding leads to closure of the extracellular end of pore, then a TonB-mediated signal facillitates opening of the interior side of pore, deforming the N-terminal plug and allowing passage of the ligand to the periplasm. Such a mechanism would prevent the free diffusion of small molecules thru the pore.
Pssm-ID: 238657 [Multi-domain] Cd Length: 635 Bit Score: 173.79 E-value: 7.91e-46
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 972326200 80 DDIRFLAARVPSLNIESSYGRAFPRFYIRGLG--NTDFDLNAsqpVSLVYDDVVQESPLLKgFPLFDLANVEVLRGPQGT 157
Cdd:cd01347 16 TSLADLLRRIPGVSVTRGGGGGGSTISIRGFGpdRTLVLVDG---LPLASSNYGRGVDLNT-IPPELIERVEVLKGPSSA 91
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 972326200 158 LFGRNTPAGVVKFDSARPSQDADGYLRVGYGSYNSWNVQGA---YGGPLT--DRWSARVSAIYQRRDDWVDntRVGAPNS 232
Cdd:cd01347 92 LYGSGAIGGVVNIITKRPTDEFGGSVTAGYGSDNSGSSGGGgfdVSGALAddGAFGARLYGAYRDGDGTID--GDGQADD 169
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 972326200 233 GFEGYDEAAGRVQF-LYEGDDFEALFNLHKRKLNGTarlFRANIIQKGGNSLVENFDRDKVANDGVNFSDLETWGGSARL 311
Cdd:cd01347 170 SDEERYNVAGKLDWrPDDDTRLTLDAGYQDQDADGP---GGTLPANGTGSSLGGGPSSNTNGDRDWDYRDRYRKRASLGL 246
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 972326200 312 --QWNLGSVTLHSITGYETAESLNRGDIDGGYGAAflgagNYGPGLIPFSSESADglphHRQWTQEVRIESN---EWGRF 386
Cdd:cd01347 247 ehDLNDTGWTLRANLSYSYTDNDGDPLILNGGNNA-----AGGDLGRSGYSSERD----TTQLGFDAGLNAPfgtGPVAH 317
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 972326200 387 DWQAGVFYFDEDVTINNfnydsltpgnpqtghvvqnqrnkaWAVFASGDFDVTDRFKLRAGVRYtqDKKDFSASVLQAVP 466
Cdd:cd01347 318 TLTLGVEYRREELDEKQ------------------------TALYAQDTIELTDDLTLTLGLRY--DHYDQDSKDTIAGG 371
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 972326200 467 FGTPVSGpylantdvNDVSWDVSGVYKLTDDINAYARVAKGFRAPSIQGRLAFAPGLSQA-------DSEKVISYEAGIK 539
Cdd:cd01347 372 TTAKKSY--------SHWSPSLGLVYKLTDGLSLYASYSQGFRAPSLGELYGGGSHGGTAavgnpnlKPEKSKQYELGLK 443
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 972326200 540 ADlFERRARLGLSVFRYNVDG--QQLIAVGGANNTATLLNADKTIGQGVELDLEAYLADNVLLTFGSSYNDTEIKDknla 617
Cdd:cd01347 444 YD-PGDGLTLSAALFRIDIKNeiVSTPTNTGLGLVTVYVNGGKARIRGVELEASYDLTDGLGLTGSYTYTDTEVKR---- 518
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 972326200 618 vaicgggctindpttvinggTYALVNGNPLPQAPKWIHNATLRVGFPLSDgseLYAYTDWAYRSAVN---FFIYESPEFR 694
Cdd:cd01347 519 --------------------TDGATTGNRLPGIPKHTANLGLDYELPDEG---LTAGGGVRYRGKQYadtANGNNTVKVP 575
|
650 660 670 680 690 700
....*....|....*....|....*....|....*....|....*....|....*....|...
gi 972326200 695 GRSSLegGLRLGYNWDYGqYDVAVFGRNLTNQTRV-VGAIDFNNLTGFLNEPRTWGVEFTAKF 756
Cdd:cd01347 576 GYTLV--DLSASYQFTKN-LTLRLGVNNLFDKDYYtSLSVRGSGLYGYYGPGRTYYLSVSYKF 635
|
|
| FecA |
COG4772 |
Outer membrane receptor for Fe3+-dicitrate [Inorganic ion transport and metabolism]; |
22-756 |
2.49e-45 |
|
Outer membrane receptor for Fe3+-dicitrate [Inorganic ion transport and metabolism];
Pssm-ID: 443804 [Multi-domain] Cd Length: 681 Bit Score: 173.19 E-value: 2.49e-45
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 972326200 22 SALLPLVAAAQETPAAKDPVALDALQVTAQR-RVENAKDVPVALSAIQGEKLDvlGSAGDDIRFLAARVPSLNIESSYGR 100
Cdd:COG4772 2 RRALAAALLLAAAAAAEAATTLETVVVTGSRaAEARLKDVPGSVSVVDREELE--NQAATSLREVLRRVPGVNVQEEDGF 79
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 972326200 101 A-FPRFYIRGLGntdfdLNASQPVSLVYDDV-VQESPLLKG----FPLFD-LANVEVLRGPQGTLFGRNTPAGVVKFDSA 173
Cdd:COG4772 80 GlRPNIGIRGLG-----PRRSRGITLLEDGIpIAPAPYGDPaayyFPDLErMERIEVLRGAAALRYGPQTVGGAINFVTR 154
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 972326200 174 RPSQDADGYLRVGYGSYNSWNVQGAYGGPlTDRWSARVSAIYQRRDDWVDNtrvgapnSGFEgYDEAAGRVQF-LYEGDD 252
Cdd:COG4772 155 TIPTAFGGELRVTGGSFGYRRTHASVGGT-VGNFGYLVEYSRKRGDGFRDN-------SGFD-INDFNAKLGYrLSDRQE 225
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 972326200 253 FEALFNLHKRKLNGTARLFRANiiqkggnslvenFDRD-KVANDGVNFSDLETWGGSARLQWNLGSVTLHSITGYetaes 331
Cdd:COG4772 226 LTLKFQYYDEDANTPGGLTDAQ------------FDADpRQSYRPADQFDTRRTQLSLRYEHQLSDNTTLTTTAY----- 288
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 972326200 332 LNRGDIDGGYGAAFLGAGNYGPGLIPfssesadglpHHRQ---WTQEVRIESN-EWG--RFDWQAGVFYFDEDVTINNFN 405
Cdd:COG4772 289 YNDFSRNWYIRQNTADPNTPGLGLRG----------NPRGyrsYGIEPRLTHRfELGgvPHTLEVGLRYHREEEDRKQYV 358
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 972326200 406 --YDSLTPGNPQTGHvvQNQRNKAWAVFASGDFDVTDRFKLRAGVRYTQDkkDFSASVLQAVPFGTPVSGpylaNTDVND 483
Cdd:COG4772 359 ntYGQGRSGAGLRRD--RRFSADALAAYAQNRFELTGRLTLTPGLRYEHI--RRDRTDRYSTRTGGDDSG----SNSYSE 430
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 972326200 484 VSWDVSGVYKLTDDINAYARVAKGFRAPSIQGRLAFAPGLSQADSEKVISYEAGIKADLFeRRARLGLSVFRYNVDGQQL 563
Cdd:COG4772 431 FLPGLGLLYQLTDNLQLYANVSRGFEPPTFGDLAYGNGGNPDLKPEKSWNYELGTRGRIG-NGLSAEVALFYIDYDNELG 509
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 972326200 564 IAVGGANNTATLLNADKTIGQGVEL----DLEAYLADNVLLTFGSSYNDTEIKDKNLAVaicgggctindpttvinggty 639
Cdd:COG4772 510 SCSAAGGDRSTFTNAGETRHQGLELaldyDLLKGGGLGLPLFAAYTYTDAEFTSDFGPV--------------------- 568
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 972326200 640 alVNGNPLPQAPKWIHNATLRVGFplsdgSELYAYTDWAYRSAVnFFIYESPEFRGRSSLEGG-----LRLGYNWdYGQY 714
Cdd:COG4772 569 --FAGNRLPYVPRHQLTAGLGYEH-----GGWTANLNGRYVSEQ-FTDAANTVADGSFGKIPSytvldLSASYDF-GKNL 639
|
730 740 750 760
....*....|....*....|....*....|....*....|...
gi 972326200 715 DVAVFGRNLTNQTRVVGAIDfNNLTGFL-NEPRTWGVEFTAKF 756
Cdd:COG4772 640 SLFAGVNNLFDKRYIASRAP-NYAAGIRpGPPRTVYAGLRLKF 681
|
|
| TonB-siderophor |
TIGR01783 |
TonB-dependent siderophore receptor; This subfamily model encompasses a wide variety of ... |
59-756 |
2.28e-27 |
|
TonB-dependent siderophore receptor; This subfamily model encompasses a wide variety of TonB-dependent outer membrane siderophore receptors. It has no overlap with TonB receptors known to transport other substances, but is likely incomplete due to lack of characterizations. It is likely that genuine siderophore receptors will be identified which score below the noise cutoff to this model at which point the model should be updated. [Transport and binding proteins, Cations and iron carrying compounds, Transport and binding proteins, Porins]
Pssm-ID: 273805 [Multi-domain] Cd Length: 651 Bit Score: 117.90 E-value: 2.28e-27
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 972326200 59 DVPVALSAIQGEKLDVLGsaGDDIRFLAARVPS-LNIESSYGRAFPRFYIRGLGNTDFDLNA---SQPVSLVYDDVVQes 134
Cdd:TIGR01783 1 DIPQSVSVITRQELEDQQ--AGSLSEALQRVPGvVVGGSGGTTQFGNITIRGFGLEVDIDNVyldGVPLLSRGNLAIV-- 76
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 972326200 135 pllkgfPLFDLANVEVLRGPQGTLFGRNTPAGVVKFDSARPSQDADGYLRVGYGSYNSWNVQGAYGGPLTD--RWSARVS 212
Cdd:TIGR01783 77 ------DPAMVERVEVLRGPASLLYGGSAPGGVINIVTKRPQDEPKGSVTFGAGTRSGYRTAFDLGGPLGAdgTFRGRLN 150
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 972326200 213 AIYQRRDDWVDN----TRVGAPNSGFEgydeAAGRVQFLYEGDDfealfnLHKRKLNGTARLFRANIIQkgGNSLVENFD 288
Cdd:TIGR01783 151 GARQDGDSFYDGageeTRLGATATDWQ----LDDRTLLRLGAYY------QKERDRGGYGGLPASGGTS--GRDLSSDRY 218
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 972326200 289 RDKVANDGVNfsDLETWGGSARLQWNLGSVtlhsITGYETAESLnRGDIDGG--YGAAFLGAGNYGPGLIPFSSESADGL 366
Cdd:TIGR01783 219 LGTSSNRNYD--DREYLSYGLSLEYQFNDV----WTGKQNLRYS-YFDTDSNqvQASGYSSDGGLFGRSLTVVNVKQDRV 291
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 972326200 367 PHHRQWTQEVRIESNE----WGRFDWQAGVFYF--DEDVTINNFNYDSLTPGNPQTGHVVQNQRN----KAWAVFASGDF 436
Cdd:TIGR01783 292 QIDAGLDGEFETGPIEhdllLGVSYGQRTTNRFnnTGYPSDNIYSLTATSSARTDIGDSPKDRALssttKALNGVALQRI 371
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 972326200 437 DVTDRFKLRAGVRYTQDKKDFSASVlqavpFGTPVSgpylanTDVNDVSWDVSGVYKLTDDINAYARVAKGFRAPSIQGR 516
Cdd:TIGR01783 372 LLADKWTLTLGGRYDSVDVKSNNGV-----AGSTGK------RDDSQFTPSLGVAYKPTDDWSLYASYAESFKPGGYYPK 440
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 972326200 517 LAfAPGLSQADSEKVISYEAGIKADlFERRARLGLSVFRYNVDGQqliAVGGANNTATLLNADKTIGQGVELDLEAYLAD 596
Cdd:TIGR01783 441 GA-GNSGDILEPEKGKNYELGVRYD-LGDSLLATAALFRITKDNQ---LVQDPVNGTFSVNAGKTRNRGVELEARGYLTP 515
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 972326200 597 NVLLTFGSSYNDTEIKDKNlavaicgggctindpttviNGGTYalvnGNPLPQAPKwiHNATLRVGFPLSDGSELYAYTd 676
Cdd:TIGR01783 516 GLSLSAGYTYTDAEFTEDT-------------------NGDTQ----GNTVPFVPK--HTASLWASYAPPVGDNGLTLG- 569
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 972326200 677 WAYRSAVNFFIYESPEFRGRSSLEGGLRLGYNWDYGQYDVAVFG-RNLTNQTRVVGAIDFNNLTG-FLNEPRTWGVEFTA 754
Cdd:TIGR01783 570 GGVQYTGKAYVDGGNTGKVPSYTVVDLSVRYDLTKKKNLTLALNvNNLFDRDYYTSGYRWGPSAYiYPGAPRTVGLSVSY 649
|
..
gi 972326200 755 KF 756
Cdd:TIGR01783 650 DF 651
|
|
| TonB_dep_Rec |
pfam00593 |
TonB dependent receptor; This model now only covers the conserved part of the barrel structure. |
279-755 |
1.26e-22 |
|
TonB dependent receptor; This model now only covers the conserved part of the barrel structure.
Pssm-ID: 395474 [Multi-domain] Cd Length: 475 Bit Score: 102.16 E-value: 1.26e-22
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 972326200 279 GGNSLVENFDRDKVANDGVNFSDLETWGGSARLQWNLGSvTLHSITGYETAESLNRGDIDGGYgaaflgAGNYGPGLIPF 358
Cdd:pfam00593 35 DGYGNDGGYLGDRPLYYGRDYSDTDRKRLSLGYDYDLGD-GLSWLSTLRLGLRYSSLDGDYTS------NSSGLSGAGDY 107
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 972326200 359 SSESADGLPHHRQWTQEVRIESNewgrFDWQAGVFYFDEDVTINNFNYDSLTPGNPQTGHVVQ--NQRNKAWAVFASGDF 436
Cdd:pfam00593 108 LSDDRLYGLYGLDGDLELSLDLS----HDLLLGVELRTAGLDYRRLDDDAYDPYDPANPSSSSysDTTTDSYGLYLQDNI 183
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 972326200 437 DVTDRFKLRAGVRYTQDKKDFSASVLQAVPFgtpvsgpylaNTDVNDVSWDVSGVYKLTDDINAYARVAKGFRAPSIQGR 516
Cdd:pfam00593 184 KLTDRLTLTLGLRYDHYSTDGDDGNGGGDNF----------SRSYSAFSPRLGLVYKPTDNLSLYASYSRGFRAPSLGEL 253
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 972326200 517 LAFAPGLSQA---------DSEKVISYEAGIKadLFERRARLGLSVFRYNVDGQQL---IAVGGANNTATLLNADKTIGQ 584
Cdd:pfam00593 254 YGSGSGGGGGavaggnpdlKPETSDNYELGLK--YDDGRLSLSLALFYIDIKNLITsdpDGPGLGGTVYTYTNVGKARIR 331
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 972326200 585 GVELDLEAYLADnvLLTFGSSYNDTEIKDKNLAVAicgggctindpttvinggtyalvNGNPLPQAPKWIHNATLRVGFP 664
Cdd:pfam00593 332 GVELELSGRLWG--LGLSGGGYTYTDADDDADADD-----------------------TGNPLPNVPRHTANLGLTYDFP 386
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 972326200 665 LSDgseLYAYTDWAYRSAVNFFIYESPE-FRGRSSLEGGLRLGYNWDYgQYDVAVFGRNLTNQT-RVVGAIDFNNLTGFL 742
Cdd:pfam00593 387 LGG---WGARLGARYVGSGERRYGDAANtFKTPGYTLVDLSAGYRLNK-NLTLRLGVNNLFDKYyKRYYSSGGGNLGGYP 462
|
490
....*....|...
gi 972326200 743 NEPRTWGVEFTAK 755
Cdd:pfam00593 463 GPGRTFYLGLSYK 475
|
|
| BtuB |
COG4206 |
Outer membrane cobalamin receptor protein BtuB [Coenzyme transport and metabolism]; |
48-235 |
4.85e-21 |
|
Outer membrane cobalamin receptor protein BtuB [Coenzyme transport and metabolism];
Pssm-ID: 443355 [Multi-domain] Cd Length: 276 Bit Score: 93.78 E-value: 4.85e-21
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 972326200 48 VTAQRRVENAKDVPVALSAIQGEKLDVLGSAgdDIRFLAARVPSLNIESSYGR-AFPRFYIRGLGntdfdlnASQPVSLV 126
Cdd:COG4206 3 VTATRLEQSKSDLTGSVTVIDAEELERSGAT--SLADALRRVPGVQVSSSGGPgSAASISIRGLG-------SNQTLVLI 73
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 972326200 127 ----YDDVVQESPLLKGFPLFDLANVEVLRGPQGTLFGRNTPAGVVKFDSARPSQDADGYLRVGYGSYNSWNVQGAYGGP 202
Cdd:COG4206 74 dgvpLNDPSLGGVDLSLIPPDDIERIEVLKGAASALYGSDAIGGVINITTKKGKKGFKGSVSASYGSFGTRRLSASLSGG 153
|
170 180 190
....*....|....*....|....*....|...
gi 972326200 203 lTDRWSARVSAIYQRRDDWVDNTRVGAPNSGFE 235
Cdd:COG4206 154 -AGKFSYSLSASYRRSDGYRYNDPDLRNNDGYE 185
|
|
| TonB-hemin |
TIGR01785 |
TonB-dependent heme/hemoglobin receptor family protein; This model represents the ... |
43-615 |
1.37e-15 |
|
TonB-dependent heme/hemoglobin receptor family protein; This model represents the TonB-dependent outer membrane heme/hemoglobin receptor/transporter found in bacteria which live in contact with animals (which contain hemoglobin or other heme-bearing globins) or legumes (which contain leghemoglobin). Some species having hits to this model such as Nostoc, Caulobacter and Chlorobium do not have an obvious source of hemoglobin-like proteins in their biological niche and so the possibility exists that they act on some other substance. [Transport and binding proteins, Cations and iron carrying compounds, Transport and binding proteins, Porins]
Pssm-ID: 273807 [Multi-domain] Cd Length: 665 Bit Score: 80.90 E-value: 1.37e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 972326200 43 LDALQVTAQRRVENAKDVPVALSAIQGEKLDVLGSAgdDIRFLAARVPSLNIESSyGRAFPRFY-IRGLGNTDfdlnasq 121
Cdd:TIGR01785 1 LDTVTVTATRTRQVLSEAPASVSVISGEQIESKQAN--NLADALNTVPGVDVTGG-GRPPGQSInIRGLQDNR------- 70
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 972326200 122 pVSLVYDDVVQesPLLKGFP-----LFDLAN---VEVLRGPQGTLFGRNTPAGVVKF------DSARPSQDADGYLRVGY 187
Cdd:TIGR01785 71 -VLVVVDGARQ--NYQRGGAhngslFVDPELlkrIEIVKGPSSSLYGSGALGGVVAFrtkdaaDLLRPGQLFGGLAKLSY 147
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 972326200 188 GSYN-SWNVQGAYGGPLTDRWSARVSAIYQRRDDWVDNTRVGAPNSGFEGYD---------EAAGRVQFLYegddfealf 257
Cdd:TIGR01785 148 GSNNnSFGGSVAVAGRLDDNLDALVAATYRDGGNYRNGNKEEATNSAYVQKNllaklgwqlDDAQRLEFSY--------- 218
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 972326200 258 nlhkRKLNGTARLFRANIiqkGGNSLVENFDRDKVANDGVNFSdletwgGSARLQWNLGSVTLHSITgyeTAESLNRGDI 337
Cdd:TIGR01785 219 ----FTTEGSLDEAQNSG---PGTEYVLGSSSTLLASSTRDRS------ATLTYNWTPEDNPWLDAT---ASLYYNRTEN 282
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 972326200 338 DGGYGAAFLGAGNYgpglIPFSSESADgLPHHRQWTQEvriesnEWGRFDWqaGVFYFDEDVTINNFNYDSLTPGNPQTG 417
Cdd:TIGR01785 283 DNDRSARGVGREEG----YQYTTYGAT-LQNTSRFDVA------SWSTLTY--GVDWMKDKRRTESFDPNSVTTIVPNPP 349
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 972326200 418 HVVQNQrnkaWAVFASGDFDV-TDRFKLRAGVRYtqDKKDFSasvlqavpfGTPVSGPYLANTDVNDVSWDVSGVYKLTD 496
Cdd:TIGR01785 350 SAKEYF----FGLFLQDNIPLlDDRLTLSAGLRY--DHYKLS---------PKTTADTEAVDRSYSRWSPSLGLSYKPVD 414
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 972326200 497 DINAYARVAKGFRAPSI-----QGRLAFAPGLS------QADSEKVISYEAGIK---ADLF--ERRARLGLSVFRYNVDg 560
Cdd:TIGR01785 415 WLTLYASYSQGFRAPSIdelygTGDHPGTPGGYtfapnpNLKPETSKTWELGANlsfDNLLldNDQLQFKVAYFYNDVK- 493
|
570 580 590 600 610 620
....*....|....*....|....*....|....*....|....*....|....*....|....
gi 972326200 561 qQLIAVG---------GANNTATLLNADKTIGQGVELDLEaYLADnvLLTFGSSYNDTEIKDKN 615
Cdd:TIGR01785 494 -DFIDLTigvtdnvtaGMNNITQYVNIDGARIRGIEASAS-YDAG--LWATGLSYGYTIGKDQN 553
|
|
| TonB-hemlactrns |
TIGR01786 |
TonB-dependent hemoglobin/transferrin/lactoferrin receptor family protein; This model ... |
44-615 |
2.37e-13 |
|
TonB-dependent hemoglobin/transferrin/lactoferrin receptor family protein; This model represents a family of TonB-dependent outer membrane receptor/transporters acting on iron-containing proteins such as hemoglobin, transferrin and lactoferrin. Two subfamily models with a narrower scope are contained within this model, the heme/hemoglobin receptor family protein model (TIGR01785) and the transferrin/lactoferrin receptor family model (TIGR01776). Accessions which score above trusted to this model while not scoring above trusted to the more specific models are most likely to be hemoglobin transporters. Nearly all of the species containing trusted hits to this model have access to hemoglobin, transferrin or lactoferrin or related proteins in their biological niche. [Transport and binding proteins, Cations and iron carrying compounds, Transport and binding proteins, Porins]
Pssm-ID: 273808 [Multi-domain] Cd Length: 715 Bit Score: 73.60 E-value: 2.37e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 972326200 44 DALQVTAQR----RVENAKDVPVALSAIQGEKLDVLGSAgdDIRFLAARVPSLNIeSSYGRAFPR-FYIRGLGNTDfdln 118
Cdd:TIGR01786 1 DTITVTATRtadpQRRDLSVTPASVSVISREQLKSQQVR--NLRDLLRYEPGVSV-VEGGRGGSQgINIRGLDKNR---- 73
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 972326200 119 asqpVSLVYDDVVQ----ESPLLKGFPLFD-----LANVEVLRGPQGTLFGRNTPAGVVKF------DSARPSQDADGYL 183
Cdd:TIGR01786 74 ----VAVLVDGIRQntsyGGQGSTFYAINSidpelIKSIEIVKGASSSLYGSGALGGVVAFrtkdaaDLLKPGKDLGGLS 149
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 972326200 184 RVGYGSYNSWNVQGAYGGPLTDRWSARVSAIYQRRDDWVDNTRVGAPN------SGFEGYDEAAGRVQFLYEGDDfealf 257
Cdd:TIGR01786 150 KLGYSSANNRFTQSVAAAGRNDDVDALVQATYRRGHELKNGNKANIGNeskrskPNPSDYKSQSFLAKLGWQLND----- 224
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 972326200 258 nLHKRKLNGTARLFRANIIQKGGNSLVENFDRDKVANDGVNFSDLETWggSARLQWNLGsvtLHSITGY----ETAESLN 333
Cdd:TIGR01786 225 -AHRLGLSLEYTQTDYDEPEMTNTSYLTKPLGAPLLSSTVVLGDSKTR--DRRTGLDYE---LNPDNSWldtvKLALDKQ 298
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 972326200 334 RGDIDggygaaflgagNYgpgLIPFSSESADGLP---HHRQWTQEVRIES--NEWGRFDW-----QAGVFYFDEDVTiNN 403
Cdd:TIGR01786 299 YIQLY-----------NY---LNATSASDYPGVDkngRYKDKYDYYTLGFdtNNKIEFSVhslslTYGLDRFKDKVS-TG 363
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 972326200 404 FNYDSLtPGNPQTGHVVQNQRNKAWA----VFASGDFDVTDRFKLRAGVRYtqDKKDFSasvlqavPFGTPVSGPYLANT 479
Cdd:TIGR01786 364 DSRRNL-PTAAYNLYGYEGENRPVKGsnfgLFLQDNIKLGDWLSLSAGLRY--DHYKTD-------PKADESKDYGAISK 433
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 972326200 480 DVNDVSWDVSGVYKLTDDINAYARVAKGFRAPSI-----------QGRLAFAPGLsQADSEKVISYEAGIKADlFErRAR 548
Cdd:TIGR01786 434 TYSRWSPSLGLTYKPTPWLTLYYSYSQGFRAPSFdelygtgahpgGGPYTFLPNP-NLKPETSKNWEIGINLH-FD-QLD 510
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 972326200 549 LGLSVFRYNVDgqQLIAVG------------GANNTATLLNADKTIGQGVEL----DLEAYLADNVLLTFGSSYNDTEIK 612
Cdd:TIGR01786 511 FKVSYFRNDYK--DFIDLGigvtakgnmaqvGSNTITNYVNIDNARIRGIELsgryDLGSFFSGPDGWTTTLKYGYTKGK 588
|
...
gi 972326200 613 DKN 615
Cdd:TIGR01786 589 DSD 591
|
|
| PRK13483 |
PRK13483 |
ligand-gated channel protein; |
14-659 |
2.07e-12 |
|
ligand-gated channel protein;
Pssm-ID: 184080 [Multi-domain] Cd Length: 660 Bit Score: 70.57 E-value: 2.07e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 972326200 14 ARPLVAALSALLPLVAAAQETPAAKDPVALDALQVTAQRRVENAKDVPVALSAIQGEKLDvlGSAGDDIRFLAARVPSLN 93
Cdd:PRK13483 4 YLAQVISALCLLPAVFVTHALAQAAPDKTMETVVVTASGYEQQIRDAPASISVITREDLE--NRFYRDLTDALLDVPGVV 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 972326200 94 IESSYGRAfpRFYIRGLGNtDFDL----------NASQPVSlvyddvvqESPLLKGF---PLFDLANVEVLRGPQGTLFG 160
Cdd:PRK13483 82 VTGGGDRT--DISLRGMGS-QYTLilvdgkrqssRETRPNS--------DGPGVEQAwtpPLAAIERIEVIRGPMSSLYG 150
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 972326200 161 RNTPAGVVKFDSARPSQDADGYLRVG---YGSYNSWNVQGA---YGGPL-TDRWSARVSAIYQRRDDwvDNTrvgapNSG 233
Cdd:PRK13483 151 SDAIGGVINIITRKVPNEWQGEVRLDttlQENSDSGNVYQAnffVNGPLiKDLLGLQLYGQYTQREE--DDI-----EGG 223
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 972326200 234 FEGYDEAAGRVQFLYE-GDDFEALFNLhkrklnGTARLFRANIIQKGGNSLV--ENFDRDKVANDGVNFSDLETWGGSAR 310
Cdd:PRK13483 224 YRDKDARSLTAKLALTpNEDHDIMLEV------GTSNQERDSTVGKTVAPLApgESCGRRGCPESSTTEYERSTVSLSHT 297
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 972326200 311 LQWNLGSVtlHSITGYETAESLNRgdidggygaaflgagnygpglipfsSESADGLPHHRQWTQEVRIESNewgrfdWQA 390
Cdd:PRK13483 298 GRWDFGTS--DTYIQHEEFDNKSR-------------------------EMKIKNTDFQSSLVAPLGQEHT------LTF 344
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 972326200 391 GVFYFDEDVTinnfnydsltpgnPQTGHVVQNQ---RNKAWAVFASGDFDVTDRFKLRAGVRYTQDKKdfsasvlqavpF 467
Cdd:PRK13483 345 GAAYNHQDLT-------------DETSNQISDLtdiSRTQWAVFSEDEWRIADDFALTGGLRLDHDEN-----------F 400
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 972326200 468 GTPVSgPylantdvndvswDVSGVYKLTDDINAYARVAKGFRAPSIQgrlAFAPGLSQA------------DSEKVISYE 535
Cdd:PRK13483 401 GGHVS-P------------RVYGVWNLAPSWTVKGGVSTGFRAPSLR---QTTPDWGQVsrggniygnpdlKPETSLNKE 464
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 972326200 536 AGIKADLFERRArLGLSVFrYN--------VDGQQLIAVGGAN----NTATLLNADKTIGQGVELDLEAYLADNVLLTFG 603
Cdd:PRK13483 465 LGLYYDLGSGLT-ASLTVF-YNefkdkitrVACPATQCTDGPNqfgaDPTTYVNIDEAVTQGVEASLSYPITSTLSLSGN 542
|
650 660 670 680 690
....*....|....*....|....*....|....*....|....*....|....*.
gi 972326200 604 SSYNDTEIKDknlavaicgggctindpttvingGTYAlvnGNPLPQAPKWIHNATL 659
Cdd:PRK13483 543 YTYTDSEQKS-----------------------GAYK---GSPLNQLPKHLFQASL 572
|
|
| Plug |
pfam07715 |
TonB-dependent Receptor Plug Domain; The Plug domain has been shown to be an independently ... |
57-167 |
2.52e-12 |
|
TonB-dependent Receptor Plug Domain; The Plug domain has been shown to be an independently folding subunit of the TonB-dependent receptors. It acts as the channel gate, blocking the pore until the channel is bound by ligand. At this point it under goes conformational changes opens the channel.
Pssm-ID: 462243 [Multi-domain] Cd Length: 107 Bit Score: 63.83 E-value: 2.52e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 972326200 57 AKDVPVALSAIQGEKLDVLGSAgdDIRFLAARVPSLNIESSYGRAFPRFYIRGLGntdfdlnaSQPVSLVYDDVVQESPL 136
Cdd:pfam07715 2 LRDTPGSVSVVTAEDIEDQGAT--NLADALRGVPGVSVSSGGGGGGSSISIRGFG--------SNRVLVLVDGVPLNSGG 71
|
90 100 110
....*....|....*....|....*....|....*.
gi 972326200 137 -----LKGFPLFDLANVEVLRGPQGTLFGRNTPAGV 167
Cdd:pfam07715 72 ggsvdLNSIDPEDIERVEVLKGPASALYGSGAIGGV 107
|
|
| PRK10003 |
PRK10003 |
ferric-rhodotorulic acid outer membrane transporter; Provisional |
1-615 |
3.26e-11 |
|
ferric-rhodotorulic acid outer membrane transporter; Provisional
Pssm-ID: 236640 [Multi-domain] Cd Length: 729 Bit Score: 66.81 E-value: 3.26e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 972326200 1 MSPTRTSRGRlPVARP-LVAALSALLPLVAAAQETPAAKDPVALDALQVTAQRRVEN----------------AKDVPVA 63
Cdd:PRK10003 3 TQFNRDNQYQ-AIAKPsLLAGCIALALLPSAAFAAPATEDTVIVEGSATAPVDDGEQdysvkttsagtkmqmtQRDIPQS 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 972326200 64 LSAI-----QGEKLDVLGSAGDDIRFLAARVpslnIESSygRAFprFYIRGLGNTDFdlnasqpvslVYDDV--VQESPL 136
Cdd:PRK10003 82 VSIVsqqrmEDQQLQTLGEVMENTLGISKSQ----ADSD--RAL--YYSRGFQIDNY----------MVDGIptYFESRW 143
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 972326200 137 LKGFPLFDLA---NVEVLRGPQGTLFGRNTPAGVVKFDSARP-SQDADGYLRVGYGSYNSWNVQGAYGGPLTD--RWSAR 210
Cdd:PRK10003 144 NLGDALSDTAlfeRVEVVRGATGLMTGTGNPSAAINMVRKHAtSREFKGDVSAEYGSWNKQRYVADLQSPLTEdgKVRAR 223
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 972326200 211 VSAIYQRRDDWVDntRVGAPNSGFEG-YDEAAGRVQFLYEGDDFEALfNLHKRKLNGTARLFRaniiqkggNSLVENFDR 289
Cdd:PRK10003 224 IVAGYQNNDSWLD--RYNSEKTFFSGiVDADLGDLTTLSAGYEYQRI-DVNSPTWGGLPRWNT--------DGSSNSYDR 292
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 972326200 290 DKVANDGVNFSDLETWGGSARLQ------WNLGSVTLHSITGYETAESLNRGDIDGGYGAAFLGAGNYGPGLIP------ 357
Cdd:PRK10003 293 ARSTAPDWAYNDKEINKVFMTLKqrfadtWQATLNATHSEVEFDSKMMYVDAYVDKATGMLVGPYSNYGPGFDYvggtgw 372
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 972326200 358 ------------FSSESAD--GLPHHRQWTQEVRIESNEWgrFDWQAGVFYFDedvtINNF-NYDSLTPGNPQTGH-VVQ 421
Cdd:PRK10003 373 nsgkrkvdaldlFADGSYElfGRQHNLMFGGSYSKQNNRY--FSSWANIFPDE----IGSFyNFNGNFPQTDWSPQsLAQ 446
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 972326200 422 NQRNKAWAVFASGDFDVTDRFKLRAGVRYTQDKKDFSAsvlqavpfgtpvsgpylANTDVNDVSWDVSGVYKLTDDINAY 501
Cdd:PRK10003 447 DDTTHMKSLYAATRVSLADPLHLILGARYTNWRVDTLT-----------------YSMEKNHTTPYAGLVYDINDNWSTY 509
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 972326200 502 ARVAkgfrapSIqgrlaFAPGLSQADSEKVIS------YEAGIKADLFERRARLGLSVFRY---NVDGQQLIAVGGANNT 572
Cdd:PRK10003 510 ASYT------SI-----FQPQNDRDSSGKYLApitgnnYELGLKSDWMNSRLTTTLAIFRIeqdNVAQSTGTPIPGSNGE 578
|
650 660 670 680
....*....|....*....|....*....|....*....|...
gi 972326200 573 ATLLNADKTIGQGVELDLEAYLADNVLLTFGSSYNDTEIKDKN 615
Cdd:PRK10003 579 TAYKAVDGTVSKGVEFELNGAITDNWQLTFGATRYIAEDNEGN 621
|
|
| PRK13486 |
PRK13486 |
TonB-dependent receptor; |
42-613 |
2.27e-08 |
|
TonB-dependent receptor;
Pssm-ID: 139606 [Multi-domain] Cd Length: 696 Bit Score: 57.72 E-value: 2.27e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 972326200 42 ALDALQVTAQRRVENAKDVPVALSAIQGEKLDvlGSAGDDIRFLAARVPSLNIESSYG---------RAFPRFY------ 106
Cdd:PRK13486 24 AEDVMIVSASGYEKKLTNAAASVSVISQEELQ--SSQYHDLAEALRSVEGVDVESGTGktggleisiRGMPASYtlilid 101
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 972326200 107 -IRGLGNTDFDLNASqpvslvyddvvqeSPLLKGF--PLFDLANVEVLRGPQGTLFGRNTPAGVVKFDSARPSQDADGYL 183
Cdd:PRK13486 102 gVRQGGSSDVTPNGF-------------SAMNTGFmpPLAAIERIEVIRGPMSTLYGSDAMGGVVNIITRKNADKWLSSV 168
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 972326200 184 RVGYG--SYNSWNVQGAY----GGPLTD-RWSARVSAIYQRRDdwvdntrvGAPNSGFEgyDEAAGRVQFLYEGDDFeal 256
Cdd:PRK13486 169 NAGLNlqESNKWGNSSQFnfwsSGPLVDdSVSLQVRGSTQQRQ--------GSSVTSLS--DTAATRIPYPTESQNY--- 235
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 972326200 257 fnlhkrklNGTARlfraniiqkggnslvenFDRDKVANDGVNFsDLETwggsARLQWNLGSVTLHSITG-YETAESLNRG 335
Cdd:PRK13486 236 --------NLGAR-----------------LDWKASEQDVLWF-DMDT----TRQRYDNRDGQLGSLTGgYDRTLRYERN 285
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 972326200 336 DIDGGYGAAFLgAGNYGPGLIPFSSESADglphhRQWTQEVrIESNEWGRfdwqAGVfyfDEDVTINNFNYDSLTPGNPQ 415
Cdd:PRK13486 286 KISAGYDHTFT-FGTWKSYLNWNETENKG-----RELVRSV-LKRDKWGL----AGQ---PRELKESNLILNSLLLTPLG 351
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 972326200 416 TGHVV---------------------QNQRNKAWAVFASGDFDVTDRFKLRAGVRYTQDKKdfsasvlqavpFGTPVSGP 474
Cdd:PRK13486 352 ESHLVtvggefqsssmkdgvvlastgETFRQKSWSVFAEDEWHLTDALALTAGSRYEHHEQ-----------FGGHFSPR 420
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 972326200 475 YLANTDVNDvSWDVSGVYKLTDDINAYARVAKGFRAPSIQGRLAFApGLSQADSEKVISYEAGIKADlferrarlGLSVF 554
Cdd:PRK13486 421 AYLVWDVAD-AWTLKGGVTTGYKAPRMGQLHKGISGVSGQGKTNLL-GNPDLKPEESVSYEAGVYYD--------NPAGL 490
|
570 580 590 600 610 620
....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 972326200 555 RYNVDG------QQLIAVGGANNTATLLNADKTIGQGVELDLE-AYLADNVLLTFGSSYNDTEIKD 613
Cdd:PRK13486 491 NANVTGfmtdfsNKIVSYSINDNTNSYVNSGKARLHGVEFAGTlPLWSEDVTLSLNYTWTRSEQRD 556
|
|
| PRK14049 |
PRK14049 |
ferrioxamine B receptor precursor protein; Provisional |
7-205 |
1.95e-05 |
|
ferrioxamine B receptor precursor protein; Provisional
Pssm-ID: 172541 [Multi-domain] Cd Length: 726 Bit Score: 47.97 E-value: 1.95e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 972326200 7 SRGRLPVARPLVAALSALlPLVAAA------QETPAAKDPVALDALQVTAQRRVENAKDVPVALSAIQGEKLDV------ 74
Cdd:PRK14049 2 SADLLPLIRAALAGTSAL-ALVATAqaqdagQESVSNEASTALETLVVNGGSGGVITADGYVATSSATGAKVDTpfletp 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 972326200 75 --LGSAGDD---------IRFLAARVPSLNIES-SYGRAFPRFYIRGLGNTD---FDLNASQPVSLvyddvvqeSPLLKG 139
Cdd:PRK14049 81 qsISSVTEQqlkdrnpqtLLETLAYTPGARVGAfGFDPRFDAFFVRGFDVTYtgvFRDNLRQPGAS--------SSIFKT 152
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 972326200 140 FPlFDLANVEVLRGPQGTLFGRNTPAGVVKFDSARPSQDADGYLRVGYGSYNSWNVQGAYGGPLTD 205
Cdd:PRK14049 153 EP-YGLEGVSILRGPSSALYGASGAGGLFNLITKRPTEEPLREVQVQYGTNNRYQGQFDFSGPVNE 217
|
|
| PRK09840 |
PRK09840 |
catecholate siderophore receptor Fiu; Provisional |
422-612 |
5.14e-05 |
|
catecholate siderophore receptor Fiu; Provisional
Pssm-ID: 182105 [Multi-domain] Cd Length: 761 Bit Score: 46.72 E-value: 5.14e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 972326200 422 NQRNKAWAVFASGDFDVTDRFKLRAGVRYTQDKKDFSASVLQAVPFGTPVSGPYLANTDV-----------NDVSWDVSG 490
Cdd:PRK09840 441 NGQTDTFAIYAFDTLQLTRDWELNGGIRLDNYHTEYDSATACGGSGRGAITCPAGVAKGSpvttvdtaksgNLVNWKAGA 520
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 972326200 491 VYKLTDDINAYARVAKGFRAPsiqGRLAFAPGLSQA---------DSEKVISYEAGIKADLFERraRLGLSVFRYNVDGQ 561
Cdd:PRK09840 521 LYKLTENGNVYINYAVSQQPP---GGSNFALAQSGSgnsanrtdfKPQKANTSEIGTKWQVLDK--RLLLTAALFRTDIE 595
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|.
gi 972326200 562 QLIAvggANNTATLLNADKTIGQGVELDLEAYLADNVLLTFGSSYNDTEIK 612
Cdd:PRK09840 596 NEVE---QNDDGTYSQYGKKRVEGYELSVAGNITPAWQVIAGYTQQKATVK 643
|
|
| PRK13513 |
PRK13513 |
ligand-gated channel protein; |
428-733 |
5.63e-05 |
|
ligand-gated channel protein;
Pssm-ID: 184104 [Multi-domain] Cd Length: 659 Bit Score: 46.68 E-value: 5.63e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 972326200 428 WAVFASGDFDVTDRFKLRAGVRYTQDKKdfsasvlqavpFGTPVSgPYLantdvndvswdvSGVYKLTDDINAYARVAKG 507
Cdd:PRK13513 364 WALFAEDEWQMTNDFALTGGIRMDQDQN-----------YGTHWT-PRL------------YGVWHLADQWTLKGGVSTG 419
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 972326200 508 FRAPSIQ-------------GRLAFAPGLSQADSEKVISYEAGIkadLFERRARLGLSVFRYNVDGQQLIA-VGGANNTA 573
Cdd:PRK13513 420 YRSPDLRqatdnwgqltgggGLPALILGNSDLKPEKSISQEIGI---LWDNQENLNASVTLFNTDFKDKITeVRNCDTTN 496
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 972326200 574 T----------------LLNADKTIGQGVELDLEAYLADNVLLTFGSSYNDTEIKDknlavaicgggctindpttvingG 637
Cdd:PRK13513 497 TdgqcvfnginydfisdRINVDKANMRGVEATFNWDINQAWSLATNYTFTQSEQKS-----------------------G 553
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 972326200 638 TYAlvnGNPLPQAPKWIHNATLrvgfplsDGSELYAYTDWA---YRSavnffiyESPEFRGRSSLEGGLRlgynwDYGQY 714
Cdd:PRK13513 554 AFA---GQPLNQMPKHMANATL-------NWQTTEDFATWIrinYRG-------KTSEYLNRTSMGSGTP-----SYTFV 611
|
330
....*....|....*....
gi 972326200 715 DVAVfGRNLTNQTRVVGAI 733
Cdd:PRK13513 612 DLGA-SYQLTKELRLMGGV 629
|
|
| PRK14050 |
PRK14050 |
TonB-dependent siderophore receptor; |
105-223 |
4.50e-04 |
|
TonB-dependent siderophore receptor;
Pssm-ID: 237595 [Multi-domain] Cd Length: 728 Bit Score: 43.64 E-value: 4.50e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 972326200 105 FYIRGlgntdFDlnASQpVSLVYDDVVQESPLLKGFPL--FDLANVEVLRGPQGTLFGRNTPAGVVKFDSARPSQDADGY 182
Cdd:PRK14050 124 FYIRG-----FD--ATQ-TGVFLDGLNLFSYGFGGFQIdpFMLERVEVLKGPASVLYGGSNPGGIVNMVSKRPLDEPLYY 195
|
90 100 110 120
....*....|....*....|....*....|....*....|...
gi 972326200 183 LRVGYGSYNSWNVQGAYGGPLTDR--WSARVSAIYQRRDDWVD 223
Cdd:PRK14050 196 TEIGINSYGNAFTGFDVGDKLSDDgtVRYRVTGKVAGGDNYSD 238
|
|
| PRK10064 |
PRK10064 |
catecholate siderophore receptor CirA; Provisional |
19-252 |
7.02e-04 |
|
catecholate siderophore receptor CirA; Provisional
Pssm-ID: 236646 [Multi-domain] Cd Length: 663 Bit Score: 42.95 E-value: 7.02e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 972326200 19 AALSALLPLVAAAQEtpaakdpvaLDALQVTAQRRVENAKDVPVALSAIQGEKL---------DVLG--------SAGDD 81
Cdd:PRK10064 15 SAISCAWPVLAVDDD---------GETMVVTASAVEQNLKDAPASISVITQEDLqrkpvqnlkDVLKevpgvqltNEGDN 85
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 972326200 82 IRFLAARvpslNIESSY------GRafpRFYIRG--LGNTDFDLNasqpvslvyddvvqespllkGFPLFDLANVEVLRG 153
Cdd:PRK10064 86 RKGVSIR----GLDSSYtlilidGK---RVNSRNavFRHNDFDLN--------------------WIPVDAIERIEVVRG 138
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 972326200 154 PQGTLFGRNTPAGVVKFDSARPSQDADGYLRVGY------GSYNSWNVQGAYGGPLTDR---WSARVSAIYQRRDDWV-- 222
Cdd:PRK10064 139 PMSSLYGSDALGGVVNIITKKIGQKWHGTVTVDTtiqehrDRGDTYNGQFFTSGPLIDGvlgMKAYGSLAKREKDDPQns 218
|
250 260 270
....*....|....*....|....*....|
gi 972326200 223 DNTRVGAPNSgFEGYDEAAGRVQFLYEGDD 252
Cdd:PRK10064 219 TTTDTGETPR-IEGFTSRDGNVEFAWTPNQ 247
|
|
| PRK10044 |
PRK10044 |
ferrichrome outer membrane transporter; Provisional |
145-258 |
1.79e-03 |
|
ferrichrome outer membrane transporter; Provisional
Pssm-ID: 236643 [Multi-domain] Cd Length: 727 Bit Score: 41.67 E-value: 1.79e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 972326200 145 LANVEVLRGPQGTLFGRNTPAGVVKFDSARPSQDADGYLRVGYGSYNSWNVQGAYGGPLTD--RWSARVSAIYQRRD--- 219
Cdd:PRK10044 159 LERAELMRGPVSVLYGKSNPGGLLNMVSKRPTTEPLKEVQFKMGTDNLFQTGFDFSDALDDdgVYSYRLTGLARSANaqq 238
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 972326200 220 --------------DWV--DNTRV-------GAPNSGFEGYDEAAGRVQFLYEGDDFEALFN 258
Cdd:PRK10044 239 kgseeqryaiapsfTWRpdDKTNFtflsyfqNEPETGYYGWLPKEGTVEPLPNGKRLPTDFN 300
|
|
| PRK09840 |
PRK09840 |
catecholate siderophore receptor Fiu; Provisional |
142-234 |
2.95e-03 |
|
catecholate siderophore receptor Fiu; Provisional
Pssm-ID: 182105 [Multi-domain] Cd Length: 761 Bit Score: 40.95 E-value: 2.95e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 972326200 142 LFDLANVEVLRGPQGTLFGRNTPAGVVKFDSARPSQD--ADGYLRVGYGSYNSWNVQgaYGGPLTDRWSARVSAIYQRRD 219
Cdd:PRK09840 144 TFNTEQVEVIKGPSGTDYGRSAPTGSINMISKQPRNDsgIDASASIGSAWFRRGTLD--VNQVIGDTTAVRLNVMGEKTH 221
|
90 100
....*....|....*....|
gi 972326200 220 ----DWVDNTRVG-APNSGF 234
Cdd:PRK09840 222 dagrDKVKNERYGvAPSVAF 241
|
|
| portal_SPP1 |
TIGR01538 |
phage portal protein, SPP1 family; This model represents one of several distantly related ... |
61-198 |
3.36e-03 |
|
phage portal protein, SPP1 family; This model represents one of several distantly related families of phage portal protein. This protein forms a hole, or portal, that enables DNA passage during packaging and ejection. It also forms the junction between the phage head (capsid) and the tail proteins. It functions as a dodecamer of a single polypeptide of average mol. wt. of 40-90 KDa. [Mobile and extrachromosomal element functions, Prophage functions]
Pssm-ID: 273678 Cd Length: 412 Bit Score: 40.60 E-value: 3.36e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 972326200 61 PVALSAIQGEKLDVLGSAGDDIRFlaarvPSLNIE-----SSYGRAFPRFYIRGLGNTDFDLNASQPVSLVYDDVVQESP 135
Cdd:TIGR01538 71 PVKFTSDDKTLLDYLNELANQNDF-----HDILNElvkdlSNKGRAYELLYVDEDDETDVVIFDPEEMFVVYDDNVEQDP 145
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 972326200 136 LlkgFPLF-----DLANVEVLrgpQGTLFgrnTPAGVVKFdsarpSQDADGYL-RVGYGSYNSWNVQGA 198
Cdd:TIGR01538 146 L---FAVRyyskkDLMGETTQ---KAELY---TDTHIYKY-----EKIDDVYQmDYSEGEYNPRPGFGR 200
|
|
| |
