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Conserved domains on  [gi|1005574924|ref|WP_061667226|]
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MULTISPECIES: cytochrome P450 [Bacillus]

Protein Classification

Graphical summary

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List of domain hits

Name Accession Description Interval E-value
P450_EryK-like cd11032
cytochrome P450 EryK and similar cytochrome P450s; This subfamily contains archaeal and ...
36-404 1.18e-156

cytochrome P450 EryK and similar cytochrome P450s; This subfamily contains archaeal and bacterial CYPs including Saccharopolyspora erythraea P450 EryK, Saccharolobus solfataricus cytochrome P450 119 (CYP119), Picrophilus torridus CYP231A2, Bacillus subtilis CYP109, Streptomyces himastatinicus HmtT and HmtN, and Bacillus megaterium CYP106A2, among others. EryK, also called erythromycin C-12 hydroxylase, is active during the final steps of erythromycin A (ErA) biosynthesis. CYP106A2 catalyzes the hydroxylation of a variety of 3-oxo-delta(4)-steroids such as progesterone and deoxycorticosterone, mainly in the 15beta-position. It is also capable of hydroxylating a variety of terpenoids. HmtT and HmtN is involved in the post-tailoring of the cyclohexadepsipeptide backbone during the biosynthesis of the himastatin antibiotic. The EryK-like subfamily belongs to the large cytochrome P450 (P450, CYP) superfamily of heme-containing proteins that catalyze a variety of oxidative reactions of a large number of structurally different endogenous and exogenous compounds in organisms from all major domains of life. CYPs bind their diverse ligands in a buried, hydrophobic active site, which is accessed through a substrate access channel formed by two flexible helices and their connecting loop.


:

Pssm-ID: 410658 [Multi-domain]  Cd Length: 368  Bit Score: 446.28  E-value: 1.18e-156
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1005574924  36 REKEPIYFNSQADMWNVFLYEDVKRVLEDKEFFSN----IMPEKKKSPFPQSILGMDPPKHTQIRSIVNRSFTPKSLKVW 111
Cdd:cd11032     1 REESPVYYDEETGAWHVFRYADVKRVLSDPATFSSdlgrLLPGEDDALTEGSLLTMDPPRHRKLRKLVSQAFTPRLIADL 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1005574924 112 ESRIQQITNDILIQLSNRDNFDIVQELFYPLPVIVIAEMLGVSVNDMDRFKKWSDIIVSspNHDDPDYLKEFFHIRLQAE 191
Cdd:cd11032    81 EPRIAEITDELLDAVDGRGEFDLVEDLAYPLPVIVIAELLGVPAEDRELFKKWSDALVS--GLGDDSFEEEEVEEMAEAL 158
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1005574924 192 NELEEFFEEIIqinRGKSKKDSNDIISLLVQSEAD-KNISGKEVVSFCKLLLVAGNETTTNLLGNLLYCLIENPDVYKQI 270
Cdd:cd11032   159 RELNAYLLEHL---EERRRNPRDDLISRLVEAEVDgERLTDEEIVGFAILLLIAGHETTTNLLGNAVLCLDEDPEVAARL 235
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1005574924 271 QQDVSLVPKAIEEVLRYRSPAQRIVRKVKKEIQIRGQTLQVDQIISGWIGSANRDSLHFKDADSFNIHRSRNPHLAFGHG 350
Cdd:cd11032   236 RADPSLIPGAIEEVLRYRPPVQRTARVTTEDVELGGVTIPAGQLVIAWLASANRDERQFEDPDTFDIDRNPNPHLSFGHG 315
                         330       340       350       360       370
                  ....*....|....*....|....*....|....*....|....*....|....
gi 1005574924 351 IHFCLGAPLARLEAKIVLTEIMKKYKSFSFIDHNLPVPISSvSSVYGLKSLPVK 404
Cdd:cd11032   316 IHFCLGAPLARLEARIALEALLDRFPRIRVDPDVPLELIDS-PVVFGVRSLPVR 368
 
Name Accession Description Interval E-value
P450_EryK-like cd11032
cytochrome P450 EryK and similar cytochrome P450s; This subfamily contains archaeal and ...
36-404 1.18e-156

cytochrome P450 EryK and similar cytochrome P450s; This subfamily contains archaeal and bacterial CYPs including Saccharopolyspora erythraea P450 EryK, Saccharolobus solfataricus cytochrome P450 119 (CYP119), Picrophilus torridus CYP231A2, Bacillus subtilis CYP109, Streptomyces himastatinicus HmtT and HmtN, and Bacillus megaterium CYP106A2, among others. EryK, also called erythromycin C-12 hydroxylase, is active during the final steps of erythromycin A (ErA) biosynthesis. CYP106A2 catalyzes the hydroxylation of a variety of 3-oxo-delta(4)-steroids such as progesterone and deoxycorticosterone, mainly in the 15beta-position. It is also capable of hydroxylating a variety of terpenoids. HmtT and HmtN is involved in the post-tailoring of the cyclohexadepsipeptide backbone during the biosynthesis of the himastatin antibiotic. The EryK-like subfamily belongs to the large cytochrome P450 (P450, CYP) superfamily of heme-containing proteins that catalyze a variety of oxidative reactions of a large number of structurally different endogenous and exogenous compounds in organisms from all major domains of life. CYPs bind their diverse ligands in a buried, hydrophobic active site, which is accessed through a substrate access channel formed by two flexible helices and their connecting loop.


Pssm-ID: 410658 [Multi-domain]  Cd Length: 368  Bit Score: 446.28  E-value: 1.18e-156
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1005574924  36 REKEPIYFNSQADMWNVFLYEDVKRVLEDKEFFSN----IMPEKKKSPFPQSILGMDPPKHTQIRSIVNRSFTPKSLKVW 111
Cdd:cd11032     1 REESPVYYDEETGAWHVFRYADVKRVLSDPATFSSdlgrLLPGEDDALTEGSLLTMDPPRHRKLRKLVSQAFTPRLIADL 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1005574924 112 ESRIQQITNDILIQLSNRDNFDIVQELFYPLPVIVIAEMLGVSVNDMDRFKKWSDIIVSspNHDDPDYLKEFFHIRLQAE 191
Cdd:cd11032    81 EPRIAEITDELLDAVDGRGEFDLVEDLAYPLPVIVIAELLGVPAEDRELFKKWSDALVS--GLGDDSFEEEEVEEMAEAL 158
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1005574924 192 NELEEFFEEIIqinRGKSKKDSNDIISLLVQSEAD-KNISGKEVVSFCKLLLVAGNETTTNLLGNLLYCLIENPDVYKQI 270
Cdd:cd11032   159 RELNAYLLEHL---EERRRNPRDDLISRLVEAEVDgERLTDEEIVGFAILLLIAGHETTTNLLGNAVLCLDEDPEVAARL 235
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1005574924 271 QQDVSLVPKAIEEVLRYRSPAQRIVRKVKKEIQIRGQTLQVDQIISGWIGSANRDSLHFKDADSFNIHRSRNPHLAFGHG 350
Cdd:cd11032   236 RADPSLIPGAIEEVLRYRPPVQRTARVTTEDVELGGVTIPAGQLVIAWLASANRDERQFEDPDTFDIDRNPNPHLSFGHG 315
                         330       340       350       360       370
                  ....*....|....*....|....*....|....*....|....*....|....
gi 1005574924 351 IHFCLGAPLARLEAKIVLTEIMKKYKSFSFIDHNLPVPISSvSSVYGLKSLPVK 404
Cdd:cd11032   316 IHFCLGAPLARLEARIALEALLDRFPRIRVDPDVPLELIDS-PVVFGVRSLPVR 368
CypX COG2124
Cytochrome P450 [Secondary metabolites biosynthesis, transport and catabolism, Defense ...
1-404 8.62e-117

Cytochrome P450 [Secondary metabolites biosynthesis, transport and catabolism, Defense mechanisms]; Cytochrome P450 is part of the Pathway/BioSystem: Biotin biosynthesis


Pssm-ID: 441727 [Multi-domain]  Cd Length: 400  Bit Score: 346.11  E-value: 8.62e-117
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1005574924   1 MKTPYQSIFMIPtnklLGKQALGDPYEpfeWYKEMREKEPIYFNSQAD--MWNVFLYEDVKRVLEDKEFFSNIM----PE 74
Cdd:COG2124     1 MTATATPAADLP----LDPAFLRDPYP---FYARLREYGPVFRVRLPGggAWLVTRYEDVREVLRDPRTFSSDGglpeVL 73
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1005574924  75 KKKSPFPQSILGMDPPKHTQIRSIVNRSFTPKSLKVWESRIQQITNDILIQLSNRDNFDIVQELFYPLPVIVIAEMLGVS 154
Cdd:COG2124    74 RPLPLLGDSLLTLDGPEHTRLRRLVQPAFTPRRVAALRPRIREIADELLDRLAARGPVDLVEEFARPLPVIVICELLGVP 153
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1005574924 155 VNDMDRFKKWSDIIVSSPNHDDPDYLKEFfhirLQAENELEEFFEEIIQINRgksKKDSNDIISLLVQSEADKN-ISGKE 233
Cdd:COG2124   154 EEDRDRLRRWSDALLDALGPLPPERRRRA----RRARAELDAYLRELIAERR---AEPGDDLLSALLAARDDGErLSDEE 226
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1005574924 234 VVSFCKLLLVAGNETTTNLLGNLLYCLIENPDVYKQIQQDVSLVPKAIEEVLRYRSPAQRIVRKVKKEIQIRGQTLQVDQ 313
Cdd:COG2124   227 LRDELLLLLLAGHETTANALAWALYALLRHPEQLARLRAEPELLPAAVEETLRLYPPVPLLPRTATEDVELGGVTIPAGD 306
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1005574924 314 IISGWIGSANRDSLHFKDADSFNIHRSRNPHLAFGHGIHFCLGAPLARLEAKIVLTEIMKKYKSFSFIDHNLPVPISSVs 393
Cdd:COG2124   307 RVLLSLAAANRDPRVFPDPDRFDPDRPPNAHLPFGGGPHRCLGAALARLEARIALATLLRRFPDLRLAPPEELRWRPSL- 385
                         410
                  ....*....|.
gi 1005574924 394 SVYGLKSLPVK 404
Cdd:COG2124   386 TLRGPKSLPVR 396
p450 pfam00067
Cytochrome P450; Cytochrome P450s are haem-thiolate proteins involved in the oxidative ...
27-389 3.54e-37

Cytochrome P450; Cytochrome P450s are haem-thiolate proteins involved in the oxidative degradation of various compounds. They are particularly well known for their role in the degradation of environmental toxins and mutagens. They can be divided into 4 classes, according to the method by which electrons from NAD(P)H are delivered to the catalytic site. Sequence conservation is relatively low within the family - there are only 3 absolutely conserved residues - but their general topography and structural fold are highly conserved. The conserved core is composed of a coil termed the 'meander', a four-helix bundle, helices J and K, and two sets of beta-sheets. These constitute the haem-binding loop (with an absolutely conserved cysteine that serves as the 5th ligand for the haem iron), the proton-transfer groove and the absolutely conserved EXXR motif in helix K. While prokaryotic P450s are soluble proteins, most eukaryotic P450s are associated with microsomal membranes. their general enzymatic function is to catalyze regiospecific and stereospecific oxidation of non-activated hydrocarbons at physiological temperatures.


Pssm-ID: 395020 [Multi-domain]  Cd Length: 461  Bit Score: 140.49  E-value: 3.54e-37
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1005574924  27 EPFEWYKEMREK-EPIY--FNSQADMWNVFLYEDVKRVLEDK-EFFSNIMPEKKKSPFP-----QSILGMDPPKHTQIRS 97
Cdd:pfam00067  21 NLHSVFTKLQKKyGPIFrlYLGPKPVVVLSGPEAVKEVLIKKgEEFSGRPDEPWFATSRgpflgKGIVFANGPRWRQLRR 100
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1005574924  98 IVNRSFTPKSLKVWESRIQQITNDILIQL----SNRDNFDIVQELFYPLPVIVIAEMLGVSVNDMD-----RFKKWSDII 168
Cdd:pfam00067 101 FLTPTFTSFGKLSFEPRVEEEARDLVEKLrktaGEPGVIDITDLLFRAALNVICSILFGERFGSLEdpkflELVKAVQEL 180
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1005574924 169 ---VSSPNHDDPDY-------LKEFFHIRLQAENELEEFFEEIIQINRGK---SKKDSNDIISLLVQSEADKNISG---K 232
Cdd:pfam00067 181 sslLSSPSPQLLDLfpilkyfPGPHGRKLKRARKKIKDLLDKLIEERRETldsAKKSPRDFLDALLLAKEEEDGSKltdE 260
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1005574924 233 EVVSFCKLLLVAGNETTTNLLGNLLYCLIENPDVYKQIQQDVS------------------LVPKAIEEVLRYRSPA-QR 293
Cdd:pfam00067 261 ELRATVLELFFAGTDTTSSTLSWALYELAKHPEVQEKLREEIDevigdkrsptyddlqnmpYLDAVIKETLRLHPVVpLL 340
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1005574924 294 IVRKVKKEIQIRGQTLQVDQIISGWIGSANRDSLHFKDADSFNIHR-------SRNP--HLAFGHGIHFCLGAPLARLEA 364
Cdd:pfam00067 341 LPREVTKDTVIPGYLIPKGTLVIVNLYALHRDPEVFPNPEEFDPERfldengkFRKSfaFLPFGAGPRNCLGERLARMEM 420
                         410       420
                  ....*....|....*....|....*
gi 1005574924 365 KIVLTEIMKKYkSFSFIDHNLPVPI 389
Cdd:pfam00067 421 KLFLATLLQNF-EVELPPGTDPPDI 444
PLN02302 PLN02302
ent-kaurenoic acid oxidase
56-395 5.35e-12

ent-kaurenoic acid oxidase


Pssm-ID: 215171 [Multi-domain]  Cd Length: 490  Bit Score: 67.05  E-value: 5.35e-12
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1005574924  56 EDVKRVLEDKEFFSNIMPEKKKSPF-PQSILGMDPPKHTQIRSIVNRSFT-PKSLKVWESRIQQITNDILIQLSNRDNFD 133
Cdd:PLN02302  101 EACKRVLTDDDAFEPGWPESTVELIgRKSFVGITGEEHKRLRRLTAAPVNgPEALSTYIPYIEENVKSCLEKWSKMGEIE 180
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1005574924 134 IVQELfyplpviviaemlgvsvnDMDRFKKWSDIIVSSPNHDDPDYLKEFFH-----IR--------------LQAENEL 194
Cdd:PLN02302  181 FLTEL------------------RKLTFKIIMYIFLSSESELVMEALEREYTtlnygVRamainlpgfayhraLKARKKL 242
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1005574924 195 EEFFEEIIQINRGKSKKDSN----DIISLL--VQSEADKNISGKEVVSFCKLLLVAGNETTTNLLGNLLYCLIENPDVYK 268
Cdd:PLN02302  243 VALFQSIVDERRNSRKQNISprkkDMLDLLldAEDENGRKLDDEEIIDLLLMYLNAGHESSGHLTMWATIFLQEHPEVLQ 322
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1005574924 269 QI--------------QQDVSL--------VPKAIEEVLRYRSPAQRIVRKVKKEIQIRGQTLQVDQIISGWIGSANRDS 326
Cdd:PLN02302  323 KAkaeqeeiakkrppgQKGLTLkdvrkmeyLSQVIDETLRLINISLTVFREAKTDVEVNGYTIPKGWKVLAWFRQVHMDP 402
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1005574924 327 LHFKDADSFNIHRSRNP------HLAFGHGIHFCLGAPLARLEAKIVLTEIMKKYK--------SFSFIDH-----NLPV 387
Cdd:PLN02302  403 EVYPNPKEFDPSRWDNYtpkagtFLPFGLGSRLCPGNDLAKLEISIFLHHFLLGYRlerlnpgcKVMYLPHprpkdNCLA 482

                  ....*...
gi 1005574924 388 PISSVSSV 395
Cdd:PLN02302  483 RITKVASE 490
 
Name Accession Description Interval E-value
P450_EryK-like cd11032
cytochrome P450 EryK and similar cytochrome P450s; This subfamily contains archaeal and ...
36-404 1.18e-156

cytochrome P450 EryK and similar cytochrome P450s; This subfamily contains archaeal and bacterial CYPs including Saccharopolyspora erythraea P450 EryK, Saccharolobus solfataricus cytochrome P450 119 (CYP119), Picrophilus torridus CYP231A2, Bacillus subtilis CYP109, Streptomyces himastatinicus HmtT and HmtN, and Bacillus megaterium CYP106A2, among others. EryK, also called erythromycin C-12 hydroxylase, is active during the final steps of erythromycin A (ErA) biosynthesis. CYP106A2 catalyzes the hydroxylation of a variety of 3-oxo-delta(4)-steroids such as progesterone and deoxycorticosterone, mainly in the 15beta-position. It is also capable of hydroxylating a variety of terpenoids. HmtT and HmtN is involved in the post-tailoring of the cyclohexadepsipeptide backbone during the biosynthesis of the himastatin antibiotic. The EryK-like subfamily belongs to the large cytochrome P450 (P450, CYP) superfamily of heme-containing proteins that catalyze a variety of oxidative reactions of a large number of structurally different endogenous and exogenous compounds in organisms from all major domains of life. CYPs bind their diverse ligands in a buried, hydrophobic active site, which is accessed through a substrate access channel formed by two flexible helices and their connecting loop.


Pssm-ID: 410658 [Multi-domain]  Cd Length: 368  Bit Score: 446.28  E-value: 1.18e-156
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1005574924  36 REKEPIYFNSQADMWNVFLYEDVKRVLEDKEFFSN----IMPEKKKSPFPQSILGMDPPKHTQIRSIVNRSFTPKSLKVW 111
Cdd:cd11032     1 REESPVYYDEETGAWHVFRYADVKRVLSDPATFSSdlgrLLPGEDDALTEGSLLTMDPPRHRKLRKLVSQAFTPRLIADL 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1005574924 112 ESRIQQITNDILIQLSNRDNFDIVQELFYPLPVIVIAEMLGVSVNDMDRFKKWSDIIVSspNHDDPDYLKEFFHIRLQAE 191
Cdd:cd11032    81 EPRIAEITDELLDAVDGRGEFDLVEDLAYPLPVIVIAELLGVPAEDRELFKKWSDALVS--GLGDDSFEEEEVEEMAEAL 158
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1005574924 192 NELEEFFEEIIqinRGKSKKDSNDIISLLVQSEAD-KNISGKEVVSFCKLLLVAGNETTTNLLGNLLYCLIENPDVYKQI 270
Cdd:cd11032   159 RELNAYLLEHL---EERRRNPRDDLISRLVEAEVDgERLTDEEIVGFAILLLIAGHETTTNLLGNAVLCLDEDPEVAARL 235
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1005574924 271 QQDVSLVPKAIEEVLRYRSPAQRIVRKVKKEIQIRGQTLQVDQIISGWIGSANRDSLHFKDADSFNIHRSRNPHLAFGHG 350
Cdd:cd11032   236 RADPSLIPGAIEEVLRYRPPVQRTARVTTEDVELGGVTIPAGQLVIAWLASANRDERQFEDPDTFDIDRNPNPHLSFGHG 315
                         330       340       350       360       370
                  ....*....|....*....|....*....|....*....|....*....|....
gi 1005574924 351 IHFCLGAPLARLEAKIVLTEIMKKYKSFSFIDHNLPVPISSvSSVYGLKSLPVK 404
Cdd:cd11032   316 IHFCLGAPLARLEARIALEALLDRFPRIRVDPDVPLELIDS-PVVFGVRSLPVR 368
CypX COG2124
Cytochrome P450 [Secondary metabolites biosynthesis, transport and catabolism, Defense ...
1-404 8.62e-117

Cytochrome P450 [Secondary metabolites biosynthesis, transport and catabolism, Defense mechanisms]; Cytochrome P450 is part of the Pathway/BioSystem: Biotin biosynthesis


Pssm-ID: 441727 [Multi-domain]  Cd Length: 400  Bit Score: 346.11  E-value: 8.62e-117
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1005574924   1 MKTPYQSIFMIPtnklLGKQALGDPYEpfeWYKEMREKEPIYFNSQAD--MWNVFLYEDVKRVLEDKEFFSNIM----PE 74
Cdd:COG2124     1 MTATATPAADLP----LDPAFLRDPYP---FYARLREYGPVFRVRLPGggAWLVTRYEDVREVLRDPRTFSSDGglpeVL 73
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1005574924  75 KKKSPFPQSILGMDPPKHTQIRSIVNRSFTPKSLKVWESRIQQITNDILIQLSNRDNFDIVQELFYPLPVIVIAEMLGVS 154
Cdd:COG2124    74 RPLPLLGDSLLTLDGPEHTRLRRLVQPAFTPRRVAALRPRIREIADELLDRLAARGPVDLVEEFARPLPVIVICELLGVP 153
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1005574924 155 VNDMDRFKKWSDIIVSSPNHDDPDYLKEFfhirLQAENELEEFFEEIIQINRgksKKDSNDIISLLVQSEADKN-ISGKE 233
Cdd:COG2124   154 EEDRDRLRRWSDALLDALGPLPPERRRRA----RRARAELDAYLRELIAERR---AEPGDDLLSALLAARDDGErLSDEE 226
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1005574924 234 VVSFCKLLLVAGNETTTNLLGNLLYCLIENPDVYKQIQQDVSLVPKAIEEVLRYRSPAQRIVRKVKKEIQIRGQTLQVDQ 313
Cdd:COG2124   227 LRDELLLLLLAGHETTANALAWALYALLRHPEQLARLRAEPELLPAAVEETLRLYPPVPLLPRTATEDVELGGVTIPAGD 306
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1005574924 314 IISGWIGSANRDSLHFKDADSFNIHRSRNPHLAFGHGIHFCLGAPLARLEAKIVLTEIMKKYKSFSFIDHNLPVPISSVs 393
Cdd:COG2124   307 RVLLSLAAANRDPRVFPDPDRFDPDRPPNAHLPFGGGPHRCLGAALARLEARIALATLLRRFPDLRLAPPEELRWRPSL- 385
                         410
                  ....*....|.
gi 1005574924 394 SVYGLKSLPVK 404
Cdd:COG2124   386 TLRGPKSLPVR 396
CYP130-like cd11078
cytochrome P450 family 130-like and similar cytochrome P450s; This subfamily includes ...
32-404 1.11e-109

cytochrome P450 family 130-like and similar cytochrome P450s; This subfamily includes Mycobacterium tuberculosis cytochrome P450 130 (CYP130), Rhodococcus erythropolis CYP116, and similar bacterial proteins. CYP130 catalyzes the N-demethylation of dextromethorphan, and has also shown a natural propensity to bind primary arylamines. CYP116 is involved in the degradation of thiocarbamate herbicides. The CYP130-like subfamily belongs to the large cytochrome P450 (P450, CYP) superfamily of heme-containing proteins that catalyze a variety of oxidative reactions of a large number of structurally different endogenous and exogenous compounds in organisms from all major domains of life. CYPs bind their diverse ligands in a buried, hydrophobic active site, which is accessed through a substrate access channel formed by two flexible helices and their connecting loop.


Pssm-ID: 410700 [Multi-domain]  Cd Length: 380  Bit Score: 327.25  E-value: 1.11e-109
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1005574924  32 YKEMREKEPIYFNSQADMWNVFLYEDVKRVLEDKEFFSN---IMPEKKKSPFPQ-----SILGMDPPKHTQIRSIVNRSF 103
Cdd:cd11078     4 YARLRDEEPVFFSEPLGYWVVSRYEDVKAVLRDPQTFSSaggLTPESPLWPEAGfaptpSLVNEDPPRHTRLRRLVSRAF 83
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1005574924 104 TPKSLKVWESRIQQITNDILIQLSNRDNFDIVQELFYPLPVIVIAEMLGVSVNDMDRFKKWSD-IIVSSPNHDDPDYLKE 182
Cdd:cd11078    84 TPRRIAALEPRIRELAAELLDRLAEDGRADFVADFAAPLPALVIAELLGVPEEDMERFRRWADaFALVTWGRPSEEEQVE 163
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1005574924 183 FFH--IRLQAENELEEFFeeiiqinRGKSKKDsnDIISLLV--QSEADKNISGKEVVSFCKLLLVAGNETTTNLLGNLLY 258
Cdd:cd11078   164 AAAavGELWAYFADLVAE-------RRREPRD--DLISDLLaaADGDGERLTDEELVAFLFLLLVAGHETTTNLLGNAVK 234
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1005574924 259 CLIENPDVYKQIQQDVSLVPKAIEEVLRYRSPAQRIVRKVKKEIQIRGQTLQVDQIISGWIGSANRDSLHFKDADSFNIH 338
Cdd:cd11078   235 LLLEHPDQWRRLRADPSLIPNAVEETLRYDSPVQGLRRTATRDVEIGGVTIPAGARVLLLFGSANRDERVFPDPDRFDID 314
                         330       340       350       360       370       380
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1005574924 339 RS-RNPHLAFGHGIHFCLGAPLARLEAKIVLTEIMKKYKSFSFIDHNlpVPISSVSSVYGLKSLPVK 404
Cdd:cd11078   315 RPnARKHLTFGHGIHFCLGAALARMEARIALEELLRRLPGMRVPGQE--VVYSPSLSFRGPESLPVE 379
CYP164-like cd20625
cytochrome P450 family 164 and similar cytochrome P450s; This group is composed mostly of ...
40-403 1.02e-101

cytochrome P450 family 164 and similar cytochrome P450s; This group is composed mostly of bacterial cytochrome P450s from multiple families, including Mycobacterium smegmatis CYP164A2, Streptomyces sp. CYP245A1, Bacillus subtilis CYP107H1, Micromonospora echinospora P450 oxidase Calo2, and putative P450s such as Xylella fastidiosa CYP133 and Mycobacterium tuberculosis CYP140. CYP107H1, also called cytochrome P450(BioI), catalyzes the C-C bond cleavage of fatty acid linked to acyl carrier protein (ACP) to generate pimelic acid for biotin biosynthesis. CYP245A1, also called cytochrome P450 StaP, catalyzes the intramolecular C-C bond formation and oxidative decarboxylation of chromopyrrolic acid (CPA) to form the indolocarbazole core, a key step in staurosporine biosynthesis. CalO2 is involved in calicheamicin biosynthesis. The CYP164-like group belongs to the large cytochrome P450 (P450, CYP) superfamily of heme-containing proteins that catalyze a variety of oxidative reactions of a large number of structurally different endogenous and exogenous compounds in organisms from all major domains of life. CYPs bind their diverse ligands in a buried, hydrophobic active site, which is accessed through a substrate access channel formed by two flexible helices and their connecting loop.


Pssm-ID: 410718 [Multi-domain]  Cd Length: 369  Bit Score: 306.40  E-value: 1.02e-101
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1005574924  40 PIYFnSQADMWNVFLYEDVKRVLEDKEFFSNIMP--------EKKKSP----FPQSILGMDPPKHTQIRSIVNRSFTPKS 107
Cdd:cd20625     2 PVHR-SPLGAWVVTRHADVSAVLRDPRFGSDDPEaaprrrggEAALRPlarlLSRSMLFLDPPDHTRLRRLVSKAFTPRA 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1005574924 108 LKVWESRIQQITNDILIQLSNRDNFDIVQELFYPLPVIVIAEMLGVSVNDMDRFKKWSDIIVSS--PNHDDPDY------ 179
Cdd:cd20625    81 VERLRPRIERLVDELLDRLAARGRVDLVADFAYPLPVRVICELLGVPEEDRPRFRGWSAALARAldPGPLLEELaranaa 160
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1005574924 180 ---LKEFF--HIRLqaeneleeffeeiiqinRGKSKKDsnDIISLLVQSEADKN-ISGKEVVSFCKLLLVAGNETTTNLL 253
Cdd:cd20625   161 aaeLAAYFrdLIAR-----------------RRADPGD--DLISALVAAEEDGDrLSEDELVANCILLLVAGHETTVNLI 221
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1005574924 254 GNLLYCLIENPDVYKQIQQDVSLVPKAIEEVLRYRSPAQRIVRKVKKEIQIRGQTLQVDQIISGWIGSANRDSLHFKDAD 333
Cdd:cd20625   222 GNGLLALLRHPEQLALLRADPELIPAAVEELLRYDSPVQLTARVALEDVEIGGQTIPAGDRVLLLLGAANRDPAVFPDPD 301
                         330       340       350       360       370       380       390
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1005574924 334 SFNIHRSRNPHLAFGHGIHFCLGAPLARLEAKIVLTEIMKKYKSFSFIDHnlPVPISSVSSVYGLKSLPV 403
Cdd:cd20625   302 RFDITRAPNRHLAFGAGIHFCLGAPLARLEAEIALRALLRRFPDLRLLAG--EPEWRPSLVLRGLRSLPV 369
CYP142-like cd11033
cytochrome P450 family 142 and similar cytochrome P450s; This family is composed of cytochrome ...
32-404 4.66e-101

cytochrome P450 family 142 and similar cytochrome P450s; This family is composed of cytochrome P450s (CYPs) with similarity to Streptomyces sp. P450sky (also called CYP163B3), Sphingopyxis macrogoltabida P450pyr hydroxylase, Novosphingobium aromaticivorans CYP108D1, Pseudomonas sp. cytochrome P450-Terp (P450terp), and Amycolatopsis balhimycina P450 OxyD, as well as several Mycobacterium proteins CYP124, CYP125, CYP126, and CYP142. P450sky is involved in the hydroxylation of three beta-hydroxylated amino acid precursors required for the biosynthesis of the cyclic depsipeptide skyllamycin. P450pyr hydroxylase is an active and selective catalyst for the regio- and stereo-selective hydroxylation at non-activated carbon atoms with a broad substrate range. P450terp catalyzes the hydroxylation of alpha-terpineol as part of its catabolic assimilation. OxyD is involved in beta-hydroxytyrosine formation during vancomycin biosynthesis. CYP124 is a methyl-branched lipid omega-hydroxylase while CYP142 is a cholesterol 27-oxidase with likely roles in host response modulation and cholesterol metabolism. This family belongs to the large cytochrome P450 (P450, CYP) superfamily of heme-containing proteins that catalyze a variety of oxidative reactions of a large number of structurally different endogenous and exogenous compounds in organisms from all major domains of life. CYPs bind their diverse ligands in a buried, hydrophobic active site, which is accessed through a substrate access channel formed by two flexible helices and their connecting loop.


Pssm-ID: 410659 [Multi-domain]  Cd Length: 378  Bit Score: 305.22  E-value: 4.66e-101
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1005574924  32 YKEMREKEPIYFNSQAD----MWNVFLYEDVKRVLEDKEFFSN--------IMPEKKKSPFPQSILGMDPPKHTQIRSIV 99
Cdd:cd11033     1 FARLRAEAPVHWHPPPDggpgFWAVTRHADVVAVSRDPELFSSarggvlidLPEEDADPAAGRMLINMDPPRHTRLRRLV 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1005574924 100 NRSFTPKSLKVWESRIQQITNDILIQLSNRDNFDIVQELFYPLPVIVIAEMLGVSVNDMDRFKKWSDIIVSSpnhDDPDY 179
Cdd:cd11033    81 SRAFTPRAVARLEDRIRERARRLVDRALARGECDFVEDVAAELPLQVIADLLGVPEEDRPKLLEWTNELVGA---DDPDY 157
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1005574924 180 LKEFFHIRLQAENELEEFFEEIIqinRGKSKKDSNDIISLLVQSEAD-KNISGKEVVSFCKLLLVAGNETTTNLLGNLLY 258
Cdd:cd11033   158 AGEAEEELAAALAELFAYFRELA---EERRANPGDDLISVLANAEVDgEPLTDEEFASFFILLAVAGNETTRNSISGGVL 234
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1005574924 259 CLIENPDVYKQIQQDVSLVPKAIEEVLRYRSPAQRIVRKVKKEIQIRGQTLQVDQIISGWIGSANRDSLHFKDADSFNIH 338
Cdd:cd11033   235 ALAEHPDQWERLRADPSLLPTAVEEILRWASPVIHFRRTATRDTELGGQRIRAGDKVVLWYASANRDEEVFDDPDRFDIT 314
                         330       340       350       360       370       380
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1005574924 339 RSRNPHLAFGHGIHFCLGAPLARLEAKIVLTEIMKKYKSFSFIDhnlPVPISSVSSVYGLKSLPVK 404
Cdd:cd11033   315 RSPNPHLAFGGGPHFCLGAHLARLELRVLFEELLDRVPDIELAG---EPERLRSNFVNGIKSLPVR 377
CYP107-like cd11029
cytochrome P450 family 107 and similar cytochrome P450s; This group contains bacterial ...
28-403 9.23e-89

cytochrome P450 family 107 and similar cytochrome P450s; This group contains bacterial cytochrome P450s from families 107 (CYP107), 154 (CYP154), 197 (CYP197), and similar proteins. Among the members of this group are: Pseudonocardia autotrophica vitamin D(3) 25-hydroxylase (also known as CYP197A; EC 1.14.15.15) that catalyzes the hydroxylation of vitamin D(3) into 25-hydroxyvitamin D(3) and 1-alpha,25-dihydroxyvitamin D(3), its physiologically active forms; Saccharopolyspora erythraea CYP107A1, also called P450eryF or 6-deoxyerythronolide B hydroxylase (EC 1.14.15.35), that catalyzes the conversion of 6-deoxyerythronolide B (6-DEB) to erythronolide B (EB) by the insertion of an oxygen at the 6S position of 6-DEB; Bacillus megaterium CYP107DY1 that displays C6-hydroxylation activity towards mevastatin to produce pravastatin; Streptomyces coelicolor CYP154C1 that shows activity towards 12- and 14-membered ring macrolactones in vitro and may be involved in catalyzing the site-specific oxidation of the precursors to macrolide antibiotics, which introduces regiochemical diversity into the macrolide ring system; and Nocardia farcinica CYP154C5 that acts on steroids with regioselectivity and stereoselectivity, converting various pregnans and androstans to yield 16 alpha-hydroxylated steroid products. Bacillus subtilis CYP107H1 is not included in this group. The CYP107-like group belongs to the large cytochrome P450 (P450, CYP) superfamily of heme-containing proteins that catalyze a variety of oxidative reactions of a large number of structurally different endogenous and exogenous compounds in organisms from all major domains of life. CYPs bind their diverse ligands in a buried, hydrophobic active site, which is accessed through a substrate access channel formed by two flexible helices and their connecting loop.


Pssm-ID: 410655 [Multi-domain]  Cd Length: 384  Bit Score: 273.64  E-value: 9.23e-89
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1005574924  28 PFEWYKEMREKEPIY---FNSQADMWNVFLYEDVKRVLEDKEFFSNI-------------MPEKKKSPFPQSILGMDPPK 91
Cdd:cd11029     1 PHPEYARLREQGPVHrvrLPGGVPAWLVTRYDDARAALADPRLSKDPrkawpafrgrapgAPPDLPPVLSDNMLTSDPPD 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1005574924  92 HTQIRSIVNRSFTPKSLKVWESRIQQITNDILIQLSNRDNFDIVQELFYPLPVIVIAEMLGVSVNDMDRFKKWSDIIVSS 171
Cdd:cd11029    81 HTRLRRLVAKAFTPRRVEALRPRIEEITDELLDALAARGVVDLVADFAYPLPITVICELLGVPEEDRDRFRRWSDALVDT 160
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1005574924 172 PNHDDP---------DYLKEFFHIrlqaeneleeffeeiiqinrgKSKKDSNDIISLLVQSEADKN-ISGKEVVSFCKLL 241
Cdd:cd11029   161 DPPPEEaaaalrelvDYLAELVAR---------------------KRAEPGDDLLSALVAARDEGDrLSEEELVSTVFLL 219
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1005574924 242 LVAGNETTTNLLGNLLYCLIENPDVYKQIQQDVSLVPKAIEEVLRYRSPAQRIVRKVKKE-IQIRGQTL-QVDQIISGwI 319
Cdd:cd11029   220 LVAGHETTVNLIGNGVLALLTHPDQLALLRADPELWPAAVEELLRYDGPVALATLRFATEdVEVGGVTIpAGEPVLVS-L 298
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1005574924 320 GSANRDSLHFKDADSFNIHRSRNPHLAFGHGIHFCLGAPLARLEAKIVLTEIMKKYKSFSfidhnLPVPISSV-----SS 394
Cdd:cd11029   299 AAANRDPARFPDPDRLDITRDANGHLAFGHGIHYCLGAPLARLEAEIALGALLTRFPDLR-----LAVPPDELrwrpsFL 373

                  ....*....
gi 1005574924 395 VYGLKSLPV 403
Cdd:cd11029   374 LRGLRALPV 382
P450cin-like cd11034
P450cin and similar cytochrome P450s; This group is composed of Citrobacter braakii cytochrome ...
50-404 1.76e-82

P450cin and similar cytochrome P450s; This group is composed of Citrobacter braakii cytochrome P450cin (P450cin, also called CYP176A1) and similar proteins. P450cin is a bacterial P450 enzyme that catalyzes the enantiospecific hydroxylation of 1,8-cineole to (1R)-6beta-hydroxycineole; its natural reduction-oxidation partner is cindoxin. This family belongs to the large cytochrome P450 (P450, CYP) superfamily of heme-containing proteins that catalyze a variety of oxidative reactions of a large number of structurally different endogenous and exogenous compounds in organisms from all major domains of life. CYPs bind their diverse ligands in a buried, hydrophobic active site, which is accessed through a substrate access channel formed by two flexible helices and their connecting loop.


Pssm-ID: 410660 [Multi-domain]  Cd Length: 361  Bit Score: 256.88  E-value: 1.76e-82
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1005574924  50 WNVFLYEDVKRVLEDKEFFSNimpekKKSPFPQSILGM--------DPPKHTQIRSIVNRSFTPKSLKVWESRIQQITND 121
Cdd:cd11034    16 WVLTRYAEVQAVARDTDTFSS-----KGVTFPRPELGEfrlmpietDPPEHKKYRKLLNPFFTPEAVEAFRPRVRQLTND 90
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1005574924 122 ILIQLSNRDNFDIVQELFYPLPVIVIAEMLGVSVNDMDRFKKWSDIIVSSPNHDDpdylkeffhiRLQAENELEEFFEEI 201
Cdd:cd11034    91 LIDAFIERGECDLVTELANPLPARLTLRLLGLPDEDGERLRDWVHAILHDEDPEE----------GAAAFAELFGHLRDL 160
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1005574924 202 IQINRGKSKkdsNDIISLLVQSEAD-KNISGKEVVSFCKLLLVAGNETTTNLLGNLLYCLIENPDVYKQIQQDVSLVPKA 280
Cdd:cd11034   161 IAERRANPR---DDLISRLIEGEIDgKPLSDGEVIGFLTLLLLGGTDTTSSALSGALLWLAQHPEDRRRLIADPSLIPNA 237
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1005574924 281 IEEVLRYRSPAQRIVRKVKKEIQIRGQTLQVDQIISGWIGSANRDSLHFKDADSFNIHRSRNPHLAFGHGIHFCLGAPLA 360
Cdd:cd11034   238 VEEFLRFYSPVAGLARTVTQEVEVGGCRLKPGDRVLLAFASANRDEEKFEDPDRIDIDRTPNRHLAFGSGVHRCLGSHLA 317
                         330       340       350       360
                  ....*....|....*....|....*....|....*....|....
gi 1005574924 361 RLEAKIVLTEIMKKYKSFSfIDHNLPVPISSVSSVYGLKSLPVK 404
Cdd:cd11034   318 RVEARVALTEVLKRIPDFE-LDPGATCEFLDSGTVRGLRTLPVI 360
Cyp158A-like cd11031
cytochrome P450 family 158, subfamily A and similar cytochrome P450s; This family is composed ...
32-403 6.88e-80

cytochrome P450 family 158, subfamily A and similar cytochrome P450s; This family is composed of cytochrome P450s (CYPs) with similarity to Streptomyces coelicolor CYP158A1 and CYP158A2, Streptomyces natalensis PimD (also known as CYP107E), Mycobacterium tuberculosis CYP121, and Micromonospora griseorubida MycG (also known as CYP107B). CYP158A1 and CYP158A2 catalyze an unusual oxidative C-C coupling reaction to polymerize flaviolin and form highly conjugated pigments; CYP158A2 produces three isomers of biflaviolin and one triflaviolin while CYP158A1 produces only two isomers of biflaviolin. PimD is a cytochrome P450 monooxygenase with native epoxidase activity that is critical in the biosynthesis of the polyene macrolide antibiotic pimaricin. CYP121 is essential for the viability of M. tuberculosis and is a novel drug target for the inhibition of mycobacterial growth. MycG catalyzes both hydroxylation and epoxidation reactions in the biosynthesis of the 16-membered ring macrolide antibiotic mycinamicin II. This family belongs to the large cytochrome P450 (P450, CYP) superfamily of heme-containing proteins that catalyze a variety of oxidative reactions of a large number of structurally different endogenous and exogenous compounds in organisms from all major domains of life. CYPs bind their diverse ligands in a buried, hydrophobic active site, which is accessed through a substrate access channel formed by two flexible helices and their connecting loop.


Pssm-ID: 410657 [Multi-domain]  Cd Length: 380  Bit Score: 250.95  E-value: 6.88e-80
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1005574924  32 YKEMREKEPIY---FNSQADMWNVFLYEDVKRVLEDKEFFSNIMPEK------KKSPFPQSILGMDPPKHTQIRSIVNRS 102
Cdd:cd11031     5 YAELRREGPVArvrLPYGDEAWLVTRYADVRQVLADPRFSRAAAAPPdaprltPEPLLPGSLMSMDPPEHTRLRRLVAKA 84
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1005574924 103 FTPKSLKVWESRIQQITNDILIQLSNRDN-FDIVQELFYPLPVIVIAEMLGVSVNDMDRFKKWSDIIVSSPnHDDPDY-- 179
Cdd:cd11031    85 FTARRVERLRPRIEEIADELLDAMEAQGPpADLVEALALPLPVAVICELLGVPYEDRERFRAWSDALLSTS-ALTPEEae 163
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1005574924 180 -----LKEFFHIRLQAeneleeffeeiiqinrgKSKKDSNDIISLLVQ-SEADKNISGKEVVSFCKLLLVAGNETTTNLL 253
Cdd:cd11031   164 aarqeLRGYMAELVAA-----------------RRAEPGDDLLSALVAaRDDDDRLSEEELVTLAVGLLVAGHETTASQI 226
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1005574924 254 GNLLYCLIENPDVYKQIQQDVSLVPKAIEEVLRYRSPAQR--IVRKVKKEIQIRGQTLQVDQIISGWIGSANRDSLHFKD 331
Cdd:cd11031   227 GNGVLLLLRHPEQLARLRADPELVPAAVEELLRYIPLGAGggFPRYATEDVELGGVTIRAGEAVLVSLNAANRDPEVFPD 306
                         330       340       350       360       370       380       390
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1005574924 332 ADSFNIHRSRNPHLAFGHGIHFCLGAPLARLEAKIVLTEIMKKyksfsFIDHNLPVPISSV-----SSVYGLKSLPV 403
Cdd:cd11031   307 PDRLDLDREPNPHLAFGHGPHHCLGAPLARLELQVALGALLRR-----LPGLRLAVPEEELrwregLLTRGPEELPV 378
CYP105-like cd11030
cytochrome P450 family 105 and similar cytochrome P450s; This group predominantly contains ...
32-403 8.53e-75

cytochrome P450 family 105 and similar cytochrome P450s; This group predominantly contains bacterial cytochrome P450s, including those belonging to families 105 (CYP105) and 165 (CYP165). Also included in this group are fungal family 55 proteins (CYP55). CYP105s are predominantly found in bacteria belonging to the phylum Actinobacteria and the order Actinomycetales, and are associated with a wide variety of pathways and processes, from steroid biotransformation to production of macrolide metabolites. CYP105A1 catalyzes two sequential hydroxylations of vitamin D3 with differing specificity and cytochrome P450-SOY (also known as CYP105D1) has been shown to be capable of both oxidation and dealkylation reactions. CYP105D6 and CYP105P1, from the filipin biosynthetic pathway, perform highly regio- and stereospecific hydroxylations. Other members of this group include, but are not limited to: CYP165D3 (also called OxyE) from the teicoplanin biosynthetic gene cluster of Actinoplanes teichomyceticus, which is responsible for the phenolic coupling of the aromatic side chains of the first and third peptide residues in the teicoplanin peptide; Micromonospora griseorubida cytochrome P450 MycCI that catalyzes hydroxylation at the C21 methyl group of mycinamicin VIII, the earliest macrolide form in the postpolyketide synthase tailoring pathway; and Fusarium oxysporum CYP55A1 (also called nitric oxide reductase cytochrome P450nor) that catalyzes an unusual reaction, the direct electron transfer from NAD(P)H to bound heme. The CYP105-like group belongs to the large cytochrome P450 (P450, CYP) superfamily of heme-containing proteins that catalyze a variety of oxidative reactions of a large number of structurally different endogenous and exogenous compounds in organisms from all major domains of life. CYPs bind their diverse ligands in a buried, hydrophobic active site, which is accessed through a substrate access channel formed by two flexible helices and their connecting loop.


Pssm-ID: 410656 [Multi-domain]  Cd Length: 381  Bit Score: 237.81  E-value: 8.53e-75
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1005574924  32 YKEMREKEPIyfnSQADMWN---VFL---YEDVKRVLEDKEFFS--------NIMPEKKKSP-FPQSILGMDPPKHTQIR 96
Cdd:cd11030     5 YAELREEGPV---SRVTLPDgrpAWLvtgHDEVRAVLADPRFSSdrtrpgfpALSPEGKAAAaLPGSFIRMDPPEHTRLR 81
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1005574924  97 SIVNRSFTPKSLKVWESRIQQITNDILIQLSNRDN-FDIVQELFYPLPVIVIAEMLGVSVNDMDRFKKWSDIIVSSpnHD 175
Cdd:cd11030    82 RMLAPEFTVRRVRALRPRIQEIVDELLDAMEAAGPpADLVEAFALPVPSLVICELLGVPYEDREFFQRRSARLLDL--SS 159
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1005574924 176 DPDylkeffhIRLQAENELEEFFEEIIqinRGKSKKDSNDIISLLVQSE-ADKNISGKEVVSFCKLLLVAGNETTTNLLG 254
Cdd:cd11030   160 TAE-------EAAAAGAELRAYLDELV---ARKRREPGDDLLSRLVAEHgAPGELTDEELVGIAVLLLVAGHETTANMIA 229
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1005574924 255 NLLYCLIENPDVYKQIQQDVSLVPKAIEEVLRYRSPAQR-IVRKVKKEIQIRGQTLQVDQIISGWIGSANRDSLHFKDAD 333
Cdd:cd11030   230 LGTLALLEHPEQLAALRADPSLVPGAVEELLRYLSIVQDgLPRVATEDVEIGGVTIRAGEGVIVSLPAANRDPAVFPDPD 309
                         330       340       350       360       370       380       390
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1005574924 334 SFNIHRSRNPHLAFGHGIHFCLGAPLARLEAKIVLTEIMKKyksfsFIDHNLPVPISSV-----SSVYGLKSLPV 403
Cdd:cd11030   310 RLDITRPARRHLAFGHGVHQCLGQNLARLELEIALPTLFRR-----FPGLRLAVPAEELpfrpdSLVYGVHELPV 379
P450_pinF1-like cd20629
cytochrome P450-pinF1 and similar cytochrome P450s; This subfamily is composed of bacterial ...
40-364 2.61e-72

cytochrome P450-pinF1 and similar cytochrome P450s; This subfamily is composed of bacterial CYPs similar to Agrobacterium tumefaciens plant-inducible cytochrome P450-pinF1, which is not essential for virulence but may be involved in the detoxification of plant protective agents at the site of wounding. The P450-pinF1-like subfamily belongs to the large cytochrome P450 (P450, CYP) superfamily of heme-containing proteins that catalyze a variety of oxidative reactions of a large number of structurally different endogenous and exogenous compounds in organisms from all major domains of life. CYPs bind their diverse ligands in a buried, hydrophobic active site, which is accessed through a substrate access channel formed by two flexible helices and their connecting loop.


Pssm-ID: 410722 [Multi-domain]  Cd Length: 353  Bit Score: 230.65  E-value: 2.61e-72
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1005574924  40 PIYFNSQADMWNVFLYEDVKRVLEDKEFFSN-IMPEKKKSPFPQ-SILGMDPPKHTQIRSIVNRSFTPKSLKVWE-SRIQ 116
Cdd:cd20629     2 PFARREDRGVYVLLRHDDVMAVLRDPRTFSSeTYDATLGGPFLGhSILAMDGEEHRRRRRLLQPAFAPRAVARWEePIVR 81
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1005574924 117 QITNDILIQLSNRDNFDIVQELFYPLPVIVIAEMLGVSVNDMDRFKKWSDIIVSSPNHDDPDYLKEFFhirlQAENELEE 196
Cdd:cd20629    82 PIAEELVDDLADLGRADLVEDFALELPARVIYALLGLPEEDLPEFTRLALAMLRGLSDPPDPDVPAAE----AAAAELYD 157
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1005574924 197 FFEEIIQINRGKskkDSNDIISLLVQSEAD-KNISGKEVVSFCKLLLVAGNETTTNLLGNLLYCLIENPDVYKQIQQDVS 275
Cdd:cd20629   158 YVLPLIAERRRA---PGDDLISRLLRAEVEgEKLDDEEIISFLRLLLPAGSDTTYRALANLLTLLLQHPEQLERVRRDRS 234
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1005574924 276 LVPKAIEEVLRYRSPAQRIVRKVKKEIQIRGQTLQVDQIISGWIGSANRDSLHFKDADSFNIHRSRNPHLAFGHGIHFCL 355
Cdd:cd20629   235 LIPAAIEEGLRWEPPVASVPRMALRDVELDGVTIPAGSLLDLSVGSANRDEDVYPDPDVFDIDRKPKPHLVFGGGAHRCL 314

                  ....*....
gi 1005574924 356 GAPLARLEA 364
Cdd:cd20629   315 GEHLARVEL 323
P450cam-like cd11035
P450cam and similar cytochrome P450s; This family is composed of cytochrome P450s (CYPs) with ...
36-403 2.89e-71

P450cam and similar cytochrome P450s; This family is composed of cytochrome P450s (CYPs) with similarity to Pseudomonas putida P450cam and Cyp101 proteins from Novosphingobium aromaticivorans such as CYP101C1 and CYP101D2. P450cam catalyzes the hydroxylation of camphor in a process that involves two electron transfers from the iron-sulfur protein, putidaredoxin. CYP101D2 is capable of oxidizing camphor while CYP101C1 does not bind camphor but is capable of binding and hydroxylating ionone derivatives such as alpha- and beta-ionone and beta-damascone. This family belongs to the large cytochrome P450 (P450, CYP) superfamily of heme-containing proteins that catalyze a variety of oxidative reactions of a large number of structurally different endogenous and exogenous compounds in organisms from all major domains of life. CYPs bind their diverse ligands in a buried, hydrophobic active site, which is accessed through a substrate access channel formed by two flexible helices and their connecting loop.


Pssm-ID: 410661 [Multi-domain]  Cd Length: 359  Bit Score: 227.86  E-value: 2.89e-71
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1005574924  36 REKEPIYFNSQAD-MWNVFLYEDVKRVLEDKEFFSN---IMPEKKKSPFPQSILGMDPPKHTQIRSIVNRSFTPKSLKVW 111
Cdd:cd11035     1 RDGPPIVYTPRNGgHWIVTRGEDIREVLRDPETFSSrviTVPPPAGEPYPLIPLELDPPEHTRYRRLLNPLFSPKAVAAL 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1005574924 112 ESRIQQITNDILIQLSNRDNFDIVQELFYPLPVIVIAEMLGVSVNDMDRFKKWSDIIVsspnHDDPDylkeffHIRLQAE 191
Cdd:cd11035    81 EPRIRERAVELIESFAPRGECDFVADFAEPFPTRVFLELMGLPLEDLDRFLEWEDAML----RPDDA------EERAAAA 150
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1005574924 192 NELEEFFEEIIQINRGKSKkdsNDIISLLVQSEAD-KNISGKEVVSFCKLLLVAGNETTTNLLGNLLYCLIENPDVYKQI 270
Cdd:cd11035   151 QAVLDYLTPLIAERRANPG---DDLISAILNAEIDgRPLTDDELLGLCFLLFLAGLDTVASALGFIFRHLARHPEDRRRL 227
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1005574924 271 QQDVSLVPKAIEEVLRYRSPAQRIvRKVKKEIQIRGQTLQVDQIISGWIGSANRDSLHFKDADSFNIHRSRNPHLAFGHG 350
Cdd:cd11035   228 REDPELIPAAVEELLRRYPLVNVA-RIVTRDVEFHGVQLKAGDMVLLPLALANRDPREFPDPDTVDFDRKPNRHLAFGAG 306
                         330       340       350       360       370
                  ....*....|....*....|....*....|....*....|....*....|...
gi 1005574924 351 IHFCLGAPLARLEAKIVLTEIMKKYKSFSFIDHNlpVPISSVSSVYGLKSLPV 403
Cdd:cd11035   307 PHRCLGSHLARLELRIALEEWLKRIPDFRLAPGA--QPTYHGGSVMGLESLPL 357
cytochrome_P450 cd00302
cytochrome P450 (CYP) superfamily; Cytochrome P450 (P450, CYP) is a large superfamily of ...
40-402 1.20e-70

cytochrome P450 (CYP) superfamily; Cytochrome P450 (P450, CYP) is a large superfamily of heme-containing proteins that catalyze a variety of oxidative reactions of a large number of structurally different endogenous and exogenous compounds in organisms from all major domains of life. CYPs with > 40% sequence identity are members of the same family. There are approximately 2250 CYP families: mammals, insects, plants, fungi, bacteria, and archaea have around 18, 208, 277, 805, 591, and 14 families, respectively. CYPs bind their diverse ligands in a buried, hydrophobic active site, which is accessed through a substrate access channel formed by two flexible helices and their connecting loop. Their monooxygenase activity relies on the reductive scission of molecular oxygen bound to the P450 heme iron, and the delivery of two electrons to the heme iron during the catalytic cycle. CYPs use a variety of redox partners, such as the eukaryotic diflavin enzyme NADPH-cytochrome P450 oxidoreductase and the bacterial/mitochondrial NAD(P)H-ferredoxin reductase and ferredoxin partners. Some CYPs are naturally linked to their redox partners and others have evolved to bypass requirements for redox partners, and instead react directly with hydrogen peroxide or NAD(P)H to facilitate oxidative or reductive catalysis.


Pssm-ID: 410651 [Multi-domain]  Cd Length: 391  Bit Score: 227.40  E-value: 1.20e-70
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1005574924  40 PIYF--NSQADMWNVFLYEDVKRVLEDKEFFSN---IMPEKKKSPFPQSILGMDPPKHTQIRSIVNRSFTPKSLKVWESR 114
Cdd:cd00302     2 PVFRvrLGGGPVVVVSDPELVREVLRDPRDFSSdagPGLPALGDFLGDGLLTLDGPEHRRLRRLLAPAFTPRALAALRPV 81
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1005574924 115 IQQITNDILIQL-SNRDNFDIVQELFYPLPVIVIAEMLGVSV--NDMDRFKKWSDIIVSSPNHDDPDYLKEFFHIRLQAE 191
Cdd:cd00302    82 IREIARELLDRLaAGGEVGDDVADLAQPLALDVIARLLGGPDlgEDLEELAELLEALLKLLGPRLLRPLPSPRLRRLRRA 161
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1005574924 192 NELEEFfeeIIQ--INRGKSKKDSNDIISLLVQSEADKNISGKEVVSFCKLLLVAGNETTTNLLGNLLYCLIENPDVYKQ 269
Cdd:cd00302   162 RARLRD---YLEelIARRRAEPADDLDLLLLADADDGGGLSDEEIVAELLTLLLAGHETTASLLAWALYLLARHPEVQER 238
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1005574924 270 IQQDV---------------SLVPKAIEEVLRYRSPAQRIVRKVKKEIQIRGQTLQVDQIISGWIGSANRDSLHFKDADS 334
Cdd:cd00302   239 LRAEIdavlgdgtpedlsklPYLEAVVEETLRLYPPVPLLPRVATEDVELGGYTIPAGTLVLLSLYAAHRDPEVFPDPDE 318
                         330       340       350       360       370       380       390
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1005574924 335 FNIHR-------SRNPHLAFGHGIHFCLGAPLARLEAKIVLTEIMKKYKSFSfiDHNLPVPISSVSSVYGLKSLP 402
Cdd:cd00302   319 FDPERflpereePRYAHLPFGAGPHRCLGARLARLELKLALATLLRRFDFEL--VPDEELEWRPSLGTLGPASLP 391
CYP199A2-like cd11037
cytochrome P450 family 199, subfamily A, polypeptide 2 and similar cytochrome P450s; This ...
24-404 6.26e-68

cytochrome P450 family 199, subfamily A, polypeptide 2 and similar cytochrome P450s; This family is composed of cytochrome P450s (CYPs) with similarity to Rhodopseudomonas palustris CYP199A2 and CYP199A4. CYP199A2 catalyzes the oxidation of aromatic carboxylic acids including indole-2-carboxylic acid, 2-naphthoic acid and 4-ethylbenzoic acid. CYP199A4 catalyzes the hydroxylation of para-substituted benzoic acids. This family belongs to the large cytochrome P450 (P450, CYP) superfamily of heme-containing proteins that catalyze a variety of oxidative reactions of a large number of structurally different endogenous and exogenous compounds in organisms from all major domains of life. CYPs bind their diverse ligands in a buried, hydrophobic active site, which is accessed through a substrate access channel formed by two flexible helices and their connecting loop.


Pssm-ID: 410663 [Multi-domain]  Cd Length: 371  Bit Score: 219.76  E-value: 6.26e-68
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1005574924  24 DPYePFewYKEMREKEPIYFNSQADMWNVFLYEDVKRVLEDKEFFSNI----MPEKKKSPFPQSILGMDPPKHTQIRSIV 99
Cdd:cd11037     1 DPY-PH--YAELRDAGPVVYLEKYDVYALARYDEVRAALRDHETFSSArgvgLNDFLNWRLPGSILASDPPEHDRLRAVL 77
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1005574924 100 NRSFTPKSLKVWESRIQQITNDILIQLSNRDNFDIVQELFYPLPVIVIAEMLGVSVNDMDRFKKWSDIIVSS--PNHDdp 177
Cdd:cd11037    78 SRPLSPRALRKLRDRIEEAADELVDELVARGEFDAVTDLAEAFPLRVVPDLVGLPEEGRENLLPWAAATFNAfgPLNE-- 155
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1005574924 178 dylkeffhIRLQAENELEEFFEEII-QINRGKSKKDSndIISLLVQSEADKNISGKEVVSFCKLLLVAGNETTTNLLGNL 256
Cdd:cd11037   156 --------RTRAALPRLKELRDWVAeQCARERLRPGG--WGAAIFEAADRGEITEDEAPLLMRDYLSAGLDTTISAIGNA 225
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1005574924 257 LYCLIENPDVYKQIQQDVSLVPKAIEEVLRYRSPAQRIVRKVKKEIQIRGQTLQVDQIISGWIGSANRDSLHFKDADSFN 336
Cdd:cd11037   226 LWLLARHPDQWERLRADPSLAPNAFEEAVRLESPVQTFSRTTTRDTELAGVTIPAGSRVLVFLGSANRDPRKWDDPDRFD 305
                         330       340       350       360       370       380
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1005574924 337 IHRSRNPHLAFGHGIHFCLGAPLARLEAKIVLTEIMKKYKSFSFIDHnlPVPISSvSSVYGLKSLPVK 404
Cdd:cd11037   306 ITRNPSGHVGFGHGVHACVGQHLARLEGEALLTALARRVDRIELAGP--PVRALN-NTLRGLASLPVR 370
CYP134A1 cd11080
cytochrome P450 family 134, subfamily A, polypeptide 1; Cytochrome P450 134A1 (CYP134A1, EC 1. ...
40-387 2.36e-59

cytochrome P450 family 134, subfamily A, polypeptide 1; Cytochrome P450 134A1 (CYP134A1, EC 1.14.15.13), also called pulcherriminic acid synthase or cyclo-L-leucyl-L-leucyl dipeptide oxidase or cytochrome P450 CYPX, catalyzes the oxidation of cyclo(L-Leu-L-Leu) (cLL) to yield pulcherriminic acid which forms the red pigment pulcherrimin via a non-enzymatic spontaneous reaction with Fe(3+). It belongs to the large cytochrome P450 (P450, CYP) superfamily of heme-containing proteins that catalyze a variety of oxidative reactions of a large number of structurally different endogenous and exogenous compounds in organisms from all major domains of life. CYPs bind their diverse ligands in a buried, hydrophobic active site, which is accessed through a substrate access channel formed by two flexible helices and their connecting loop.


Pssm-ID: 410702 [Multi-domain]  Cd Length: 370  Bit Score: 197.31  E-value: 2.36e-59
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1005574924  40 PIYFNSQADMWNVFLYEDVKRVLEDKEFFSNIMPEKKKSPF--PQSILGMDPPKHTQIRSIVNRSFTPKSLKVWESRIQQ 117
Cdd:cd11080     2 PVHYEESIDSYFVSRYEDVRRILKDPDGFTTKSLAERAEPVmrGPVLAQMTGKEHAAKRAIVVRAFRGDALDHLLPLIKE 81
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1005574924 118 ITNDILIQLSNRDNFDIVQELFYPLPVIVIAEMLGVSVNDMDRFKKW-SDIIVSSPNHDDPDylkeffHIRLQAENELEE 196
Cdd:cd11080    82 NAEELIAPFLERGRVDLVNDFGKPFAVNVTMDMLGLDKRDHEKIHEWhSSVAAFITSLSQDP------EARAHGLRCAEQ 155
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1005574924 197 FFEEIIQINRGKSKKDSNDIISLLVQSEADK-NISGKEVVSFCKLLLVAGNETTTNLLGNLLYCLIENPDVYKQIQQDVS 275
Cdd:cd11080   156 LSQYLLPVIEERRVNPGSDLISILCTAEYEGeALSDEDIKALILNVLLAATEPADKTLALMIYHLLNNPEQLAAVRADRS 235
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1005574924 276 LVPKAIEEVLRYRSPAQRIVRKVKKEIQIRGQTLQVDQIISGWIGSANRDSLHFKDADSFNIHRSR-NP---------HL 345
Cdd:cd11080   236 LVPRAIAETLRYHPPVQLIPRQASQDVVVSGMEIKKGTTVFCLIGAANRDPAAFEDPDTFNIHREDlGIrsafsgaadHL 315
                         330       340       350       360
                  ....*....|....*....|....*....|....*....|..
gi 1005574924 346 AFGHGIHFCLGAPLARLEAKIVLTEIMKKYKSFSFIDHNLPV 387
Cdd:cd11080   316 AFGSGRHFCVGAALAKREIEIVANQVLDALPNIRLEPGFEYA 357
CYP_AurH-like cd11038
cytochrome P450 AurH and similar cytochrome P450s; This group includes Streptomyces thioluteus ...
50-404 2.78e-56

cytochrome P450 AurH and similar cytochrome P450s; This group includes Streptomyces thioluteus P450 monooxygenase AurH which is uniquely capable of forming a homochiral tetrahydrofuran ring, a vital component of the polyketide antibiotic aureothin. AurH catalyzes an unprecedented tandem oxygenation process: first, it catalyzes an asymmetric hydroxylation of deoxyaureothin to yield (7R)-7-hydroxydeoxyaureothin as an intermediate; and second, it mediates another C-O bond formation that leads to O-heterocyclization. The AurH-like subfamily belongs to the large cytochrome P450 (P450, CYP) superfamily of heme-containing proteins that catalyze a variety of oxidative reactions of a large number of structurally different endogenous and exogenous compounds in organisms from all major domains of life. CYPs bind their diverse ligands in a buried, hydrophobic active site, which is accessed through a substrate access channel formed by two flexible helices and their connecting loop.


Pssm-ID: 410664 [Multi-domain]  Cd Length: 382  Bit Score: 189.88  E-value: 2.78e-56
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1005574924  50 WNVFLYEDVKRVLEDKEFFSNIM--PEKKKSP-------FPQSILGMDPPKHTQIRSIVNRSFTPKSLKVWESRIQQITN 120
Cdd:cd11038    28 LAVLRYEEVGQLLRDRRLRQGGHrwLAMNGVTegpfadwWVDFLLSLEGADHARLRGLVNPAFTPKAVEALRPRFRATAN 107
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1005574924 121 DILIQLSNRDNFDIVQELFYPLPVIVIAEMLGVSVNDMDRFKKWSDIIVSSPNHDDPDYLKEFfhirLQAENELEEFFEE 200
Cdd:cd11038   108 DLIDGFAEGGECEFVEAFAEPYPARVICTLLGLPEEDWPRVHRWSADLGLAFGLEVKDHLPRI----EAAVEELYDYADA 183
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1005574924 201 IIQINRgksKKDSNDIISLLVQSEADKN-ISGKEVVSFCKLLLVAGNETTTNLLGNLLYCLIENPDVYKQIQQDVSLVPK 279
Cdd:cd11038   184 LIEARR---AEPGDDLISTLVAAEQDGDrLSDEELRNLIVALLFAGVDTTRNQLGLAMLTFAEHPDQWRALREDPELAPA 260
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1005574924 280 AIEEVLRYRSPAQRIVRKVKKEIQIRGQTLQVDQIISGWIGSANRDSLHFkDADSFNIHRSRNPHLAFGHGIHFCLGAPL 359
Cdd:cd11038   261 AVEEVLRWCPTTTWATREAVEDVEYNGVTIPAGTVVHLCSHAANRDPRVF-DADRFDITAKRAPHLGFGGGVHHCLGAFL 339
                         330       340       350       360
                  ....*....|....*....|....*....|....*....|....*...
gi 1005574924 360 ARL---EAKIVLTEIMKKYKSFSfidhnlPVPISSVSSVYGLKSLPVK 404
Cdd:cd11038   340 ARAelaEALTVLARRLPTPAIAG------EPTWLPDSGNTGPATLPLR 381
P450_epoK-like cd20630
cytochrome P450epok and similar cytochrome P450s; Sorangium cellulosum cytochrome P450epoK is ...
40-375 2.08e-52

cytochrome P450epok and similar cytochrome P450s; Sorangium cellulosum cytochrome P450epoK is a heme-containing monooxygenase which participates in epothilone biosynthesis where it catalyzes the epoxidation of epothilones C and D into epothilones A and B, respectively. This subfamily belongs to the large cytochrome P450 (P450, CYP) superfamily of heme-containing proteins that catalyze a variety of oxidative reactions of a large number of structurally different endogenous and exogenous compounds in organisms from all major domains of life. CYPs bind their diverse ligands in a buried, hydrophobic active site, which is accessed through a substrate access channel formed by two flexible helices and their connecting loop.


Pssm-ID: 410723 [Multi-domain]  Cd Length: 373  Bit Score: 179.16  E-value: 2.08e-52
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1005574924  40 PIYFNSQADMWNVFLYEDVKRVLEDKEFFSN-----------IMPEKKKS-PFPQSILGMDPPKHTQIRSIVNRSFTPKS 107
Cdd:cd20630     2 PLFYWPEGQAWVMTRMEDVMAVLRDPRLSADrrewefaaelpLADEPSLArLIKGGLFLLAPEDHARVRKLVAPAFTPRA 81
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1005574924 108 LKVWESRIQQITNDILIQLSNRDNFDIVQELFYPLPVIVIAEMLGVSVNDMDRFKKWSD-IIVSSPNHDDPDYLKEffhI 186
Cdd:cd20630    82 IDRLRAEIQAIVDQLLDELGEPEEFDVIREIAEHIPFRVISAMLGVPAEWDEQFRRFGTaTIRLLPPGLDPEELET---A 158
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1005574924 187 RlQAENELEEFFEEIIQINRGKSKKDsnDIISLLVQSEAD-KNISGKEVVSFCKLLLVAGNETTTNLLGNLLYCLIENPD 265
Cdd:cd20630   159 A-PDVTEGLALIEEVIAERRQAPVED--DLLTTLLRAEEDgERLSEDELMALVAALIVAGTDTTVHLITFAVYNLLKHPE 235
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1005574924 266 VYKQIQQDVSLVPKAIEEVLRYRSPAQR-IVRKVKKEIQIRGQTLQVDQIISGWIGSANRDSLHFKDADSFNIHRSRNPH 344
Cdd:cd20630   236 ALRKVKAEPELLRNALEEVLRWDNFGKMgTARYATEDVELCGVTIRKGQMVLLLLPSALRDEKVFSDPDRFDVRRDPNAN 315
                         330       340       350
                  ....*....|....*....|....*....|.
gi 1005574924 345 LAFGHGIHFCLGAPLARLEAKIVLTEIMKKY 375
Cdd:cd20630   316 IAFGYGPHFCIGAALARLELELAVSTLLRRF 346
Cyp_unk cd11079
unknown subfamily of mostly bacterial cytochrome P450s; This subfamily is composed of ...
50-402 9.25e-44

unknown subfamily of mostly bacterial cytochrome P450s; This subfamily is composed of uncharacterized cytochrome P450s, predominantly from bacteria. Cytochrome P450 (P450, CYP) is a large superfamily of heme-containing proteins that catalyze a variety of oxidative reactions of a large number of structurally different endogenous and exogenous compounds in organisms from all major domains of life. CYPs bind their diverse ligands in a buried, hydrophobic active site, which is accessed through a substrate access channel formed by two flexible helices and their connecting loop. Their monooxygenase activity relies on the reductive scission of molecular oxygen bound to the P450 heme iron, and the delivery of two electrons to the heme iron during the catalytic cycle.


Pssm-ID: 410701 [Multi-domain]  Cd Length: 350  Bit Score: 155.98  E-value: 9.25e-44
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1005574924  50 WNVFLYEDVKRVLEDKEFFSNIMpekkkSPFPQSILGMDPPKHTQIRSIVNRSFTPKSLKVWESRIQQITNDILIQLSNR 129
Cdd:cd11079    11 WVVLRHADVKAAAEDPETFSSAV-----SARLSVPNGMDPPEHTAYRAAIDRYFTPERLARFEPVCRRVAARLVAELPAG 85
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1005574924 130 DNFDIVQELFYPLPVIVIAEMLGVSVNDMDRFKKWSdiivsSPNHD---DPDYLK------EFFHIrlqaeneleefFEE 200
Cdd:cd11079    86 GGGDVVGQFAQPFAVRVQTAFLGWPAALERPLAEWV-----NKNHAatrSGDRAAtaevaeEFDGI-----------IRD 149
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1005574924 201 IIQINRGKSKKDSNDIISLLVQSEAD-KNISGKEVVSFCKLLLVAGNETTTNLLGNLLYCLIENPDVYKQIQQDVSLVPK 279
Cdd:cd11079   150 LLADRRAAPRDADDDVTARLLRERVDgRPLTDEEIVSILRNWTVGELGTIAACVGVLVHYLARHPELQARLRANPALLPA 229
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1005574924 280 AIEEVLRYRSPAQRIVRKVKKEIQIRGQTL-QVDQIISGWIgSANRDSLHFKDADSFNIHRSRNPHLAFGHGIHFCLGAP 358
Cdd:cd11079   230 AIDEILRLDDPFVANRRITTRDVELGGRTIpAGSRVTLNWA-SANRDERVFGDPDEFDPDRHAADNLVYGRGIHVCPGAP 308
                         330       340       350       360
                  ....*....|....*....|....*....|....*....|....
gi 1005574924 359 LARLEAKIVLTEIMKKYKSFSFIDHNLPVPisSVSSVYGLKSLP 402
Cdd:cd11079   309 LARLELRILLEELLAQTEAITLAAGGPPER--ATYPVGGYASVP 350
P450-pinF2-like cd11039
P450-pinF2 and similar cytochrome P450s; This family is composed of cytochrome P450s (CYPs) ...
24-376 1.35e-38

P450-pinF2 and similar cytochrome P450s; This family is composed of cytochrome P450s (CYPs) with similarity to Agrobacterium tumefaciens P450-pinF2, whose expression is induced by the presence of wounded plant tissue and by plant phenolic compounds such as acetosyringone. P450-pinF2 may be involved in the detoxification of plant protective agents at the site of wounding. This family belongs to the large cytochrome P450 (P450, CYP) superfamily of heme-containing proteins that catalyze a variety of oxidative reactions of a large number of structurally different endogenous and exogenous compounds in organisms from all major domains of life. CYPs bind their diverse ligands in a buried, hydrophobic active site, which is accessed through a substrate access channel formed by two flexible helices and their connecting loop.


Pssm-ID: 410665 [Multi-domain]  Cd Length: 372  Bit Score: 142.64  E-value: 1.35e-38
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1005574924  24 DPYePFewYKEMREKEPIYFNSQADMWNVFLYEDVKRVLEDKEFFSnimPEKKKSPFP----QSILGMDPPKHTQIRSIV 99
Cdd:cd11039     1 DPY-PI--YARMRSEAPVAYVPSLRETLVTRRDDIRAVEKDIEVFS---SSQPAGLMNvlmgHNMMRKDGEAHACERRAI 74
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1005574924 100 NRSFTPKSLK-VWESRIQQITNDILIQLSNRDNFDIVQELFYPLPVIVIAEMLG---VSVNDMDRfkkWSD-IIVSSPNH 174
Cdd:cd11039    75 FPTFSPKTVKsYWAALFRAVVQRFLDDIEPGGAADLFTELAEPVSARCLKDILGlteTSNAELDR---WSQaMIDGAGNY 151
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1005574924 175 DDPDYLKEFFHIRLQAENEleeffeeiiQINRGKSKKDSNDIISLL-VQSEADKNISGKEVVSFCKLLLVAGNETTTNLL 253
Cdd:cd11039   152 SGDPEVEARCDEATAGIDA---------AIDALIPVHRSNPNPSLLsVMLNAGMPMSLEQIRANIKVAIGGGLNEPRDAI 222
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1005574924 254 GNLLYCLIENPDVYKQIQQDVSLVPKAIEEVLRYRSPAQRIVRKVKKEIQIRGQTLQVDQIISGWIGSANRDSLHFKDAD 333
Cdd:cd11039   223 AGTCWGLLSNPEQLAEVMAGDVHWLRAFEEGLRWISPIGMSPRRVAEDFEIRGVTLPAGDRVFLMFGSANRDEARFENPD 302
                         330       340       350       360
                  ....*....|....*....|....*....|....*....|....
gi 1005574924 334 SFNIHRSRNPHLAFGHGIHFCLGAPLAR-LEAKIVLTEIMKKYK 376
Cdd:cd11039   303 RFDVFRPKSPHVSFGAGPHFCAGAWASRqMVGEIALPELFRRLP 346
p450 pfam00067
Cytochrome P450; Cytochrome P450s are haem-thiolate proteins involved in the oxidative ...
27-389 3.54e-37

Cytochrome P450; Cytochrome P450s are haem-thiolate proteins involved in the oxidative degradation of various compounds. They are particularly well known for their role in the degradation of environmental toxins and mutagens. They can be divided into 4 classes, according to the method by which electrons from NAD(P)H are delivered to the catalytic site. Sequence conservation is relatively low within the family - there are only 3 absolutely conserved residues - but their general topography and structural fold are highly conserved. The conserved core is composed of a coil termed the 'meander', a four-helix bundle, helices J and K, and two sets of beta-sheets. These constitute the haem-binding loop (with an absolutely conserved cysteine that serves as the 5th ligand for the haem iron), the proton-transfer groove and the absolutely conserved EXXR motif in helix K. While prokaryotic P450s are soluble proteins, most eukaryotic P450s are associated with microsomal membranes. their general enzymatic function is to catalyze regiospecific and stereospecific oxidation of non-activated hydrocarbons at physiological temperatures.


Pssm-ID: 395020 [Multi-domain]  Cd Length: 461  Bit Score: 140.49  E-value: 3.54e-37
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1005574924  27 EPFEWYKEMREK-EPIY--FNSQADMWNVFLYEDVKRVLEDK-EFFSNIMPEKKKSPFP-----QSILGMDPPKHTQIRS 97
Cdd:pfam00067  21 NLHSVFTKLQKKyGPIFrlYLGPKPVVVLSGPEAVKEVLIKKgEEFSGRPDEPWFATSRgpflgKGIVFANGPRWRQLRR 100
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1005574924  98 IVNRSFTPKSLKVWESRIQQITNDILIQL----SNRDNFDIVQELFYPLPVIVIAEMLGVSVNDMD-----RFKKWSDII 168
Cdd:pfam00067 101 FLTPTFTSFGKLSFEPRVEEEARDLVEKLrktaGEPGVIDITDLLFRAALNVICSILFGERFGSLEdpkflELVKAVQEL 180
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1005574924 169 ---VSSPNHDDPDY-------LKEFFHIRLQAENELEEFFEEIIQINRGK---SKKDSNDIISLLVQSEADKNISG---K 232
Cdd:pfam00067 181 sslLSSPSPQLLDLfpilkyfPGPHGRKLKRARKKIKDLLDKLIEERRETldsAKKSPRDFLDALLLAKEEEDGSKltdE 260
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1005574924 233 EVVSFCKLLLVAGNETTTNLLGNLLYCLIENPDVYKQIQQDVS------------------LVPKAIEEVLRYRSPA-QR 293
Cdd:pfam00067 261 ELRATVLELFFAGTDTTSSTLSWALYELAKHPEVQEKLREEIDevigdkrsptyddlqnmpYLDAVIKETLRLHPVVpLL 340
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1005574924 294 IVRKVKKEIQIRGQTLQVDQIISGWIGSANRDSLHFKDADSFNIHR-------SRNP--HLAFGHGIHFCLGAPLARLEA 364
Cdd:pfam00067 341 LPREVTKDTVIPGYLIPKGTLVIVNLYALHRDPEVFPNPEEFDPERfldengkFRKSfaFLPFGAGPRNCLGERLARMEM 420
                         410       420
                  ....*....|....*....|....*
gi 1005574924 365 KIVLTEIMKKYkSFSFIDHNLPVPI 389
Cdd:pfam00067 421 KLFLATLLQNF-EVELPPGTDPPDI 444
CYP110-like cd11053
cytochrome P450 family 110 and similar cytochrome P450s; This group is composed of mostly ...
52-375 5.47e-24

cytochrome P450 family 110 and similar cytochrome P450s; This group is composed of mostly uncharacterized proteins, including Nostoc sp. probable cytochrome P450 110 (CYP110) and putative cytochrome P450s 139 (CYP139), 138 (CYP138), and 135B1 (CYP135B1) from Mycobacterium bovis. CYP110 genes, unique to cyanobacteria, are widely distributed in heterocyst-forming cyanobacteria including nitrogen-fixing genera Nostoc and Anabaena. This family belongs to the large cytochrome P450 (P450, CYP) superfamily of heme-containing proteins that catalyze a variety of oxidative reactions of a large number of structurally different endogenous and exogenous compounds in organisms from all major domains of life. CYPs bind their diverse ligands in a buried, hydrophobic active site, which is accessed through a substrate access channel formed by two flexible helices and their connecting loop.


Pssm-ID: 410676 [Multi-domain]  Cd Length: 415  Bit Score: 102.66  E-value: 5.47e-24
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1005574924  52 VFLY--EDVKRVLE-DKEFFsniMPEKKKSPF-----PQSILGMDPPKHTQIRSIVNRSFTPKSLKVWESRIQQITNDIL 123
Cdd:cd11053    26 VVLSdpEAIKQIFTaDPDVL---HPGEGNSLLepllgPNSLLLLDGDRHRRRRKLLMPAFHGERLRAYGELIAEITEREI 102
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1005574924 124 IQLSNRDNFDIVQELF-YPLPVIVIAeMLGVSVND--------MDRFKKWSDIIVSSPNHDDPDYLKEF-FHIRLQAENE 193
Cdd:cd11053   103 DRWPPGQPFDLRELMQeITLEVILRV-VFGVDDGErlqelrrlLPRLLDLLSSPLASFPALQRDLGPWSpWGRFLRARRR 181
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1005574924 194 LEEFFEEIIQINRGKSKKDSNDIISLLVQSEA-------DKNISGkEVVSfcklLLVAGNETTTNLLGNLLYCLIENPDV 266
Cdd:cd11053   182 IDALIYAEIAERRAEPDAERDDILSLLLSARDedgqplsDEELRD-ELMT----LLFAGHETTATALAWAFYWLHRHPEV 256
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1005574924 267 YKQIQQDVS-----LVPKAIE----------EVLRYRSPAQRIVRKVKKEIQIRGQTLQVDQIISGWIGSANRDSLHFKD 331
Cdd:cd11053   257 LARLLAELDalggdPDPEDIAklpyldavikETLRLYPVAPLVPRRVKEPVELGGYTLPAGTTVAPSIYLTHHRPDLYPD 336
                         330       340       350       360       370
                  ....*....|....*....|....*....|....*....|....*....|
gi 1005574924 332 ADSFN----IHRSRNPH--LAFGHGIHFCLGAPLARLEAKIVLTEIMKKY 375
Cdd:cd11053   337 PERFRperfLGRKPSPYeyLPFGGGVRRCIGAAFALLEMKVVLATLLRRF 386
CYP_LDS-like_C cd20612
C-terminal cytochrome P450 domain of linoleate diol synthase and similar cytochrome P450s; ...
50-373 1.16e-23

C-terminal cytochrome P450 domain of linoleate diol synthase and similar cytochrome P450s; This family contains Gaeumannomyces graminis linoleate diol synthase (LDS) and similar proteins including Ssp1 from the phytopathogenic basidiomycete Ustilago maydis. LDS, also called linoleate (8R)-dioxygenase, catalyzes the dioxygenation of linoleic acid to (8R)-hydroperoxylinoleate and the isomerization of the resulting hydroperoxide to (7S,8S)-dihydroxylinoleate. Ssp1 is expressed in mature teliospores, which are produced by U. maydis only after infection of its host plant, maize. Ssp1 is localized on lipid bodies in germinating teliospores, suggesting a role in the mobilization of storage lipids. LDS and Ssp1 contain an N-terminal dioxygenase domain related to animal heme peroxidases, and a C-terminal cytochrome P450 domain. The LDS-like subfamily belongs to the large cytochrome P450 (P450, CYP) superfamily of heme-containing proteins that catalyze a variety of oxidative reactions of a large number of structurally different endogenous and exogenous compounds in organisms from all major domains of life. CYPs bind their diverse ligands in a buried, hydrophobic active site, which is accessed through a substrate access channel formed by two flexible helices and their connecting loop.


Pssm-ID: 410705 [Multi-domain]  Cd Length: 370  Bit Score: 101.26  E-value: 1.16e-23
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1005574924  50 WNVFLYEDVKRVLEDKEFFSNIMPEKKKSPFPQS---ILGMDPPKHTQIRSIVNRS-FTPKSLKVWESRIQQITNDILIQ 125
Cdd:cd20612    14 VIVTRYADVKKVLEDPESFSVPWGPAMEDLTKGGpffLLGGDTPANDRQRELMRKAlYSPDLAKDVVFFYELQTRALLVE 93
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1005574924 126 ----LSNRDNFDIVQELFYPLPVIVIAEMLGVSVNDMDRFKK---------WSDIIVSSPNHDDPDylkeffHIRLQaen 192
Cdd:cd20612    94 ssrlGGSGGQVDIVRDVANLVPARFCADLFGLPLKTKENPRGgyteaelyrALAAIFAYIFFDLDP------AKSFQ--- 164
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1005574924 193 eleeffeeiiqiNRGKSKKDSNDIISLLvqseaDKNISGkEVVSFCKLLLVAGNETTTNLLGNLL--YCLIENPDVYKQI 270
Cdd:cd20612   165 ------------LRRAAQAAAARLGALL-----DAAVAD-EVRDNVLGTAVGGVPTQSQAFAQILdfYLRRPGAAHLAEI 226
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1005574924 271 QQDVSLVPKAIEEVLRY-------RSPAQRIVRKVKKEIQI-----RGQTLQVDQIISGWIGSANRDSLHFKDADSFNIH 338
Cdd:cd20612   227 QALARENDEADATLRGYvlealrlNPIAPGLYRRATTDTTVadgggRTVSIKAGDRVFVSLASAMRDPRAFPDPERFRLD 306
                         330       340       350
                  ....*....|....*....|....*....|....*
gi 1005574924 339 RSRNPHLAFGHGIHFCLGAPLARleakIVLTEIMK 373
Cdd:cd20612   307 RPLESYIHFGHGPHQCLGEEIAR----AALTEMLR 337
AknT-like cd11036
AknT-like proteins; This family is composed of proteins similar to Streptomyces biosynthesis ...
40-371 1.62e-23

AknT-like proteins; This family is composed of proteins similar to Streptomyces biosynthesis proteins including anthracycline biosynthesis proteins DnrQ and AknT, and macrolide antibiotic biosynthesis proteins TylM3 and DesVIII. Streptomyces peucetius DnrQ is involved in the biosynthesis of carminomycin and daunorubicin (daunomycin) while Streptomyces galilaeus AknT functions in the biosynthesis of aclacinomycin A. Streptomyces fradiae TylM3 is involved in the biosynthesis of tylosin derived from the polyketide lactone tylactone, and Streptomyces venezuelae functions in the biosynthesis of methymycin, neomethymycin, narbomycin, and pikromycin. These proteins are required for the glycosylation of specific substrates during the biosynthesis of specific anthracyclines and macrolide antibiotics. Although members of this family belong to the large cytochrome P450 (P450, CYP) superfamily and show significant similarity to cytochrome P450s, they lack heme-binding sites and are not functional cytochromes.


Pssm-ID: 410662 [Multi-domain]  Cd Length: 340  Bit Score: 100.26  E-value: 1.62e-23
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1005574924  40 PIYFNSQADMWNVFLYEDVKRVLEDKEF----FSNIMPEKKKSPFPQSILGMDPPKHTQIRSIVNRsftPKSLKVWESRI 115
Cdd:cd11036     4 PLYRSDLLGLWVTSDAAAADAVLADPALrvrpAAGPVPPAAGLPFGRLVRMTDGPDHSALRPAAAP---ALGGADVRPLA 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1005574924 116 QQITNDILIQLSnrDNFDIVQELFYPLPVIVIAEMLGVSVNDMDRFKKwsDIIVSSPNHDDPDYLKEFFHIRLQAENELE 195
Cdd:cd11036    81 ERARARALDAAP--PGFDLVADFLRPLPVRVAAALLGLPADDRARFAR--LFAALAPALDSLLCARALLAARALLRAALA 156
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1005574924 196 EFFEeiiqinrgkskkdsndiISLLVQSEADKNISGKEVVSFCKLLLVAGNETTTNLLGNLLYCLIENPDVYKQIQQDVS 275
Cdd:cd11036   157 ELLA-----------------LTRSAAADALALSAPGDLVANAILLAVQGAEAAAGLVGNAVLALLRRPAQWARLRPDPE 219
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1005574924 276 LVPKAIEEVLRYRSPAQRIVRKVKKEIQIRGQTLQVDQIISGWIGSANRDSLHFKDADSFNIHRSRNPHLAFGHGIHFCL 355
Cdd:cd11036   220 LAAAAVAETLRYDPPVRLERRFAAEDLELAGVTLPAGDHVVVLLAAANRDPEAFPDPDRFDLGRPTARSAHFGLGRHACL 299
                         330
                  ....*....|....*.
gi 1005574924 356 GAPLARLEAKIVLTEI 371
Cdd:cd11036   300 GAALARAAAAAALRAL 315
CYP120A1_CYP26-like cd11044
cyanobacterial cytochrome P450 family 120, subfamily A, polypeptide 1 (CYP120A1), vertebrate ...
51-375 3.93e-23

cyanobacterial cytochrome P450 family 120, subfamily A, polypeptide 1 (CYP120A1), vertebrate cytochrome P450 family 26 enzymes, and similar cytochrome P450s; This family includes cyanobacterial CYP120A1 and vertebrate cytochrome P450s 26A1 (CYP26A1), 26B1 (CYP26B1), and 26C1 (CYP26C1). These are retinoic acid-metabolizing cytochromes that play key roles in retinoic acid (RA) metabolism. Human and zebrafish CYP26a1, as well as Synechocystis CYP120A1 are characterized as RA hydroxylases. RA is a critical signaling molecule that regulates gene transcription and the cell cycle. This family belongs to the large cytochrome P450 (P450, CYP) superfamily of heme-containing proteins that catalyze a variety of oxidative reactions of a large number of structurally different endogenous and exogenous compounds in organisms from all major domains of life. CYPs bind their diverse ligands in a buried, hydrophobic active site, which is accessed through a substrate access channel formed by two flexible helices and their connecting loop.


Pssm-ID: 410670 [Multi-domain]  Cd Length: 420  Bit Score: 100.44  E-value: 3.93e-23
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1005574924  51 NVFL--YEDVKRVL-EDKEFFSNIMPEKKKSPF-PQSILGMDPPKHTQIRSIVNRSFTPKSLKVWESRIQQITNDILIQL 126
Cdd:cd11044    34 TVFVigAEAVRFILsGEGKLVRYGWPRSVRRLLgENSLSLQDGEEHRRRRKLLAPAFSREALESYVPTIQAIVQSYLRKW 113
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1005574924 127 SNRDNFDIVQEL-FYPLPVI---VIAEMLGVSVNDMDR-FKKWSDIIVSSPnhddPDYLKEFFHIRLQAENELEEFFEEI 201
Cdd:cd11044   114 LKAGEVALYPELrRLTFDVAarlLLGLDPEVEAEALSQdFETWTDGLFSLP----VPLPFTPFGRAIRARNKLLARLEQA 189
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1005574924 202 IQINRGKSKKDSNDIISLLVQSEADKN--ISGKEVVSFCKLLLVAGNETTTNLLGNLLYCLIENPDVYKQIQQD------ 273
Cdd:cd11044   190 IRERQEEENAEAKDALGLLLEAKDEDGepLSMDELKDQALLLLFAGHETTASALTSLCFELAQHPDVLEKLRQEqdalgl 269
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1005574924 274 -----------VSLVPKAIEEVLRYRSPAQRIVRKVKKEIQIRGQtlqvdQIISGW-----IGSANRDSLHFKDADSFN- 336
Cdd:cd11044   270 eepltleslkkMPYLDQVIKEVLRLVPPVGGGFRKVLEDFELGGY-----QIPKGWlvyysIRDTHRDPELYPDPERFDp 344
                         330       340       350       360
                  ....*....|....*....|....*....|....*....|....*...
gi 1005574924 337 ---------IHRSRNPHLAFGHGIHFCLGAPLARLEAKIVLTEIMKKY 375
Cdd:cd11044   345 erfsparseDKKKPFSLIPFGGGPRECLGKEFAQLEMKILASELLRNY 392
CYP3A-like cd11055
cytochrome P450 family 3, subfamily A and similar cytochrome P450s; This family includes ...
201-376 6.15e-22

cytochrome P450 family 3, subfamily A and similar cytochrome P450s; This family includes vertebrate CYP3A subfamily enzymes and CYP5a1, and similar proteins. CYP5A1, also called thromboxane-A synthase, converts prostaglandin H2 into thromboxane A2, a biologically active metabolite of arachidonic acid. CYP3A enzymes are drug-metabolizing enzymes embedded in the endoplasmic reticulum, where they can catalyze a wide variety of biochemical reactions including hydroxylation, N-demethylation, O-dealkylation, S-oxidation, deamination, or epoxidation of substrates. The CYP3A-like family belongs to the large cytochrome P450 (P450, CYP) superfamily of heme-containing proteins that catalyze a variety of oxidative reactions of a large number of structurally different endogenous and exogenous compounds in organisms from all major domains of life. CYPs bind their diverse ligands in a buried, hydrophobic active site, which is accessed through a substrate access channel formed by two flexible helices and their connecting loop.


Pssm-ID: 410678 [Multi-domain]  Cd Length: 422  Bit Score: 96.88  E-value: 6.15e-22
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1005574924 201 IIQINRGKSKKDSNDIISLLVQSEADKNISGK------EVVSFCKLLLVAGNETTTNLLGNLLYCLIENPDVYKQIQQDV 274
Cdd:cd11055   188 IIEQRRKNKSSRRKDLLQLMLDAQDSDEDVSKkkltddEIVAQSFIFLLAGYETTSNTLSFASYLLATNPDVQEKLIEEI 267
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1005574924 275 SLV-PKA-----------------IEEVLRYRSPAQRIVRKVKKEIQIRGQTLQVDQIISGWIGSANRDSLHFKDADSFN 336
Cdd:cd11055   268 DEVlPDDgsptydtvsklkyldmvINETLRLYPPAFFISRECKEDCTINGVFIPKGVDVVIPVYAIHHDPEFWPDPEKFD 347
                         170       180       190       200
                  ....*....|....*....|....*....|....*....|....*....
gi 1005574924 337 IHR-------SRNPH--LAFGHGIHFCLGAPLARLEAKIVLTEIMKKYK 376
Cdd:cd11055   348 PERfspenkaKRHPYayLPFGAGPRNCIGMRFALLEVKLALVKILQKFR 396
CYP5011A1-like cd20621
cytochrome P450 monooxygenase CYP5011A1 and similar cytochrome P450s; This subfamily is ...
65-376 5.99e-21

cytochrome P450 monooxygenase CYP5011A1 and similar cytochrome P450s; This subfamily is composed of CYPs from unicellular ciliates similar to Tetrahymena thermophila CYP5011A1, whose function is still unknown. It belongs to the large cytochrome P450 (P450, CYP) superfamily of heme-containing proteins that catalyze a variety of oxidative reactions of a large number of structurally different endogenous and exogenous compounds in organisms from all major domains of life. CYPs bind their diverse ligands in a buried, hydrophobic active site, which is accessed through a substrate access channel formed by two flexible helices and their connecting loop.


Pssm-ID: 410714 [Multi-domain]  Cd Length: 427  Bit Score: 94.24  E-value: 5.99e-21
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1005574924  65 KEFFSNIMPEKKKSPFP-------QSILGMDPPKHTQIRSIVNRSFTPKSLKVWESRIQQITNDILIQLSNRdNFDIVQE 137
Cdd:cd20621    25 KEFLQNHHYYKKKFGPLgidrlfgKGLLFSEGEEWKKQRKLLSNSFHFEKLKSRLPMINEITKEKIKKLDNQ-NVNIIQF 103
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1005574924 138 LFYPLPVIVI-----AEMLGVSVNDMD---------------------------RFKKWSDIIVSSPNHDDPD-YLKEFF 184
Cdd:cd20621   104 LQKITGEVVIrsffgEEAKDLKINGKEiqvelveiliesflyrfsspyfqlkrlIFGRKSWKLFPTKKEKKLQkRVKELR 183
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1005574924 185 HIRLQaeneleEFFEEIIQINRGKSKKDSNDII---SLLVQSEADKNISGKEVVSFCKLLLVAGNETTTNLLGNLLYCLI 261
Cdd:cd20621   184 QFIEK------IIQNRIKQIKKNKDEIKDIIIDldlYLLQKKKLEQEITKEEIIQQFITFFFAGTDTTGHLVGMCLYYLA 257
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1005574924 262 ENPDVYKQIQQDV-SLVPKA-----------------IEEVLRYRSPA-QRIVRKVKKEIQIRGQTLQVDQIISGWIGSA 322
Cdd:cd20621   258 KYPEIQEKLRQEIkSVVGNDdditfedlqklnylnafIKEVLRLYNPApFLFPRVATQDHQIGDLKIKKGWIVNVGYIYN 337
                         330       340       350       360       370       380
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1005574924 323 NRDSLHFKDADSFNIHR------SRNPHLAFghgIHF------CLGAPLARLEAKIVLTEIMKKYK 376
Cdd:cd20621   338 HFNPKYFENPDEFNPERwlnqnnIEDNPFVF---IPFsagprnCIGQHLALMEAKIILIYILKNFE 400
CYP_unk cd20623
unknown subfamily of actinobacterial cytochrome P450s; This subfamily is composed of ...
49-404 9.05e-20

unknown subfamily of actinobacterial cytochrome P450s; This subfamily is composed of uncharacterized cytochrome P450s. Cytochrome P450 (P450, CYP) is a large superfamily of heme-containing proteins that catalyze a variety of oxidative reactions of a large number of structurally different endogenous and exogenous compounds in organisms from all major domains of life. CYPs bind their diverse ligands in a buried, hydrophobic active site, which is accessed through a substrate access channel formed by two flexible helices and their connecting loop. Their monooxygenase activity relies on the reductive scission of molecular oxygen bound to the P450 heme iron, and the delivery of two electrons to the heme iron during the catalytic cycle.


Pssm-ID: 410716 [Multi-domain]  Cd Length: 367  Bit Score: 90.02  E-value: 9.05e-20
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1005574924  49 MWNVFLYEDVKRVLEDKEFFS---------NIMPEKKKSPFP------QSILGMDPPKHTQIRSIVNRSFTPKSLKVWES 113
Cdd:cd20623    14 AWLVLGYREALQVLRDPELFArdprrwrawDEGRVPPDWPLLpmvgwrPNALFADGEEHRRLRAAITDALGAVDQHELRR 93
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1005574924 114 RIQQITNDILIQLSNRDNFDIVQELFYPLPVIVIAEMLGVSVNDMDRF-KKWSDIIVSSPNHDDPdylkeffHIRLQAen 192
Cdd:cd20623    94 HVERIADELIDGFAGAGRADLVAQYARPLPMLVLARLFGLPDEEGDRLvEDLAAMIDGGEDALAA-------NARLVG-- 164
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1005574924 193 eleeffeEIIQINRGKSKKDSNDIISLLVQSEADknISGKEVVSFCKLLLVAGNETTTNLLGNLLYCLIENPDVYKQIQQ 272
Cdd:cd20623   165 -------ALRELVALRRARPGDDLTSRLLAHPAG--LTDEEVVHDLVLLLGAGHEPTTNLIGNTLRLMLTDPRFAASLSG 235
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1005574924 273 DVSLVPKAIEEVLRYRSPAQRIV-RKVKKEIQIRGQTLQVDQIISGWIGSANRDSL-HFKDADSfniHRSRNPHLAFGHG 350
Cdd:cd20623   236 GRLSVREALNEVLWRDPPLANLAgRFAARDTELGGQWIRAGDLVVLGLAAANADPRvRPDPGAS---MSGNRAHLAFGAG 312
                         330       340       350       360       370       380
                  ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1005574924 351 IHFCLGAPLARLEAKI---VLTEimkkyksfSFIDHNLPVP---ISSVSSVY--GLKSLPVK 404
Cdd:cd20623   313 PHRCPAQELAETIARTaveVLLD--------RLPDLELAVPpdqLRWRPSPWhrGLRALPVR 366
CYP51-like cd11042
cytochrome P450 family 51 and similar cytochrome P450s; This family is composed of cytochrome ...
201-388 1.18e-18

cytochrome P450 family 51 and similar cytochrome P450s; This family is composed of cytochrome P450 51 (CYP51 or sterol 14alpha-demethylase) and related cytochrome P450s. CYP51 is the only cytochrome P450 enzyme with a conserved function across animals, fungi, and plants, in the synthesis of essential sterols. In mammals, it is expressed in many different tissues, with highest expression in testis, ovary, adrenal gland, prostate, liver, kidney, and lung. In fungi, CYP51 is a significant drug target for treatment of human protozoan infections. In plants, it functions within a specialized defense-related metabolic pathway. CYP51 is also found in several bacterial species. This family belongs to the large cytochrome P450 (P450, CYP) superfamily of heme-containing proteins that catalyze a variety of oxidative reactions of a large number of structurally different endogenous and exogenous compounds in organisms from all major domains of life. CYPs bind their diverse ligands in a buried, hydrophobic active site, which is accessed through a substrate access channel formed by two flexible helices and their connecting loop.


Pssm-ID: 410668 [Multi-domain]  Cd Length: 416  Bit Score: 87.27  E-value: 1.18e-18
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1005574924 201 IIQINRGKSKKDSNDIISLLVQSEADK--NISGKEVVSFCKLLLVAGNETTTNLLGNLLYCLIENPDVYKQIQQDVSLVP 278
Cdd:cd11042   178 IIQKRRKSPDKDEDDMLQTLMDAKYKDgrPLTDDEIAGLLIALLFAGQHTSSATSAWTGLELLRNPEHLEALREEQKEVL 257
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1005574924 279 K-------------------AIEEVLRYRSPAQRIVRKVKKEIQIRGQTLQvdqIISGWI-----GSANRDSLHFKDADS 334
Cdd:cd11042   258 GdgddpltydvlkempllhaCIKETLRLHPPIHSLMRKARKPFEVEGGGYV---IPKGHIvlaspAVSHRDPEIFKNPDE 334
                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1005574924 335 FNIHR-----------SRNPHLAFGHGIHFCLGAPLARLEAKIVLTEIMKKYKsFSFIDHNLPVP 388
Cdd:cd11042   335 FDPERflkgraedskgGKFAYLPFGAGRHRCIGENFAYLQIKTILSTLLRNFD-FELVDSPFPEP 398
CYP67-like cd11061
cytochrome P450 family 67 and similar cytochrome P450s; This subfamily includes Uromyces ...
88-375 3.21e-17

cytochrome P450 family 67 and similar cytochrome P450s; This subfamily includes Uromyces viciae-fabae cytochrome P450 67 (CYP67), also called planta-induced rust protein 16, Cystobasidium minutum (Rhodotorula minuta) cytochrome P450rm, and other fungal cytochrome P450s. P450rm catalyzes the formation of isobutene and 4-hydroxylation of benzoate. The gene encoding CYP67 is a planta-induced gene that is expressed in haustoria and rust-infected leaves. The CYP67-like subfamily belongs to the large cytochrome P450 (P450, CYP) superfamily of heme-containing proteins that catalyze a variety of oxidative reactions of a large number of structurally different endogenous and exogenous compounds in organisms from all major domains of life. CYPs bind their diverse ligands in a buried, hydrophobic active site, which is accessed through a substrate access channel formed by two flexible helices and their connecting loop.


Pssm-ID: 410684 [Multi-domain]  Cd Length: 418  Bit Score: 83.04  E-value: 3.21e-17
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1005574924  88 DPPKHTQIRSIVNRSFTPKSLKVWESRIQQITNDILIQLSNRDN-----------------FDIVQELFY---------- 140
Cdd:cd11061    50 DKAEHARRRRVWSHAFSDKALRGYEPRILSHVEQLCEQLDDRAGkpvswpvdmsdwfnylsFDVMGDLAFgksfgmlesg 129
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1005574924 141 ---PLPVIVIAEMLGVSV----NDMDRFKKWSDIIVSSPNHDDPdyLKEFFHIRLQaeneleeffeeiiqiNRGKSKKDS 213
Cdd:cd11061   130 kdrYILDLLEKSMVRLGVlghaPWLRPLLLDLPLFPGATKARKR--FLDFVRAQLK---------------ERLKAEEEK 192
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1005574924 214 -NDIISLLVQSEADKNISGK---EVVSFCKLLLVAGNETTTNLLGNLLYCLIENPDVYKQIQ----------QDVSLVPK 279
Cdd:cd11061   193 rPDIFSYLLEAKDPETGEGLdleELVGEARLLIVAGSDTTATALSAIFYYLARNPEAYEKLRaeldstfpsdDEIRLGPK 272
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1005574924 280 A---------IEEVLRYRSPAQRIV-RKVKKE-IQIRGQTLQVDQIISGWIGSANRDSLHFKDADSF----------NIH 338
Cdd:cd11061   273 LkslpylracIDEALRLSPPVPSGLpRETPPGgLTIDGEYIPGGTTVSVPIYSIHRDERYFPDPFEFiperwlsrpeELV 352
                         330       340       350
                  ....*....|....*....|....*....|....*..
gi 1005574924 339 RSRNPHLAFGHGIHFCLGAPLARLEAKIVLTEIMKKY 375
Cdd:cd11061   353 RARSAFIPFSIGPRGCIGKNLAYMELRLVLARLLHRY 389
CYP90-like cd11043
plant cytochrome P450s similar to cytochrome P450 family 90, subfamily A, polypeptide 1, ...
81-376 6.58e-17

plant cytochrome P450s similar to cytochrome P450 family 90, subfamily A, polypeptide 1, cytochrome P450 family 90, subfamily B, polypeptide 1, and cytochrome P450 family 90, subfamily D, polypeptide 2; This family is composed of plant cytochrome P450s including: Arabidopsis thaliana cytochrome P450s 85A1 (CYP85A1 or brassinosteroid-6-oxidase 1), 90A1 (CYP90A1), 88A3 (CYP88A3 or ent-kaurenoic acid oxidase 1), 90B1 (CYP90B1 or Dwarf4 or steroid 22-alpha-hydroxylase), and 90C1 (CYP90C1 or 3-epi-6-deoxocathasterone 23-monooxygenase); Oryza sativa cytochrome P450s 90D2 (CYP90D2 or C6-oxidase), 87A3 (CYP87A3), and 724B1 (CYP724B1 or dwarf protein 11); and Taxus cuspidata cytochrome P450 725A2 (CYP725A2 or taxane 13-alpha-hydroxylase). These enzymes are monooxygenases that catalyze oxidation reactions involved in steroid or hormone biosynthesis. CYP85A1, CYP90D2, and CYP90C1 are involved in brassinosteroids biosynthesis, while CYP88A3 catalyzes three successive oxidations of ent-kaurenoic acid, which is a key step in the synthesis of gibberellins. This family belongs to the large cytochrome P450 (P450, CYP) superfamily of heme-containing proteins that catalyze a variety of oxidative reactions of a large number of structurally different endogenous and exogenous compounds in organisms from all major domains of life. CYPs bind their diverse ligands in a buried, hydrophobic active site, which is accessed through a substrate access channel formed by two flexible helices and their connecting loop.


Pssm-ID: 410669 [Multi-domain]  Cd Length: 408  Bit Score: 81.84  E-value: 6.58e-17
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1005574924  81 PQSILGMDPPKHTQIRSIVNRSFTPKSLKV-WESRIQQITNDILIQLSNRDNFDiVQELFYPLPVIVIAEMLgVSVND-- 157
Cdd:cd11043    52 KSSLLTVSGEEHKRLRGLLLSFLGPEALKDrLLGDIDELVRQHLDSWWRGKSVV-VLELAKKMTFELICKLL-LGIDPee 129
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1005574924 158 -----MDRFKKWSDIIVSSPnhddpdyLKEF---FHIRLQAENELEEFFEEIIQ--INRGKSKKDSNDIISLLVQ--SEA 225
Cdd:cd11043   130 vveelRKEFQAFLEGLLSFP-------LNLPgttFHRALKARKRIRKELKKIIEerRAELEKASPKGDLLDVLLEekDED 202
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1005574924 226 DKNISGKEVVSFCKLLLVAGNETTTNLLGNLLYCLIENPDVYKQIQQ------------------DVSLVP---KAIEEV 284
Cdd:cd11043   203 GDSLTDEEILDNILTLLFAGHETTSTTLTLAVKFLAENPKVLQELLEeheeiakrkeegegltweDYKSMKytwQVINET 282
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1005574924 285 LRYRSPAQRIVRKVKKEIQIRGQTlqvdqIISGWI-----GSANRDSLHFKDADSFNIHRSRNPH-------LAFGHGIH 352
Cdd:cd11043   283 LRLAPIVPGVFRKALQDVEYKGYT-----IPKGWKvlwsaRATHLDPEYFPDPLKFNPWRWEGKGkgvpytfLPFGGGPR 357
                         330       340
                  ....*....|....*....|....
gi 1005574924 353 FCLGAPLARLEAKIVLTEIMKKYK 376
Cdd:cd11043   358 LCPGAELAKLEILVFLHHLVTRFR 381
CYP132-like cd20620
cytochrome P450 family 132 and similar cytochrome P450s; This subfamily is composed of ...
206-375 1.79e-15

cytochrome P450 family 132 and similar cytochrome P450s; This subfamily is composed of Mycobacterium tuberculosis cytochrome P450 132 (CYP132) and similar proteins. The function of CYP132 is as yet unknown. CYP132 belongs to the large cytochrome P450 (P450, CYP) superfamily of heme-containing proteins that catalyze a variety of oxidative reactions of a large number of structurally different endogenous and exogenous compounds in organisms from all major domains of life. CYPs bind their diverse ligands in a buried, hydrophobic active site, which is accessed through a substrate access channel formed by two flexible helices and their connecting loop.


Pssm-ID: 410713 [Multi-domain]  Cd Length: 406  Bit Score: 77.62  E-value: 1.79e-15
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1005574924 206 RGKSKKDSNDIISLLVQSEADKNISG-------KEVVSfcklLLVAGNETTTNLLGNLLYCLIENPDVYKQIQQDVSLV- 277
Cdd:cd20620   182 RRAAPADGGDLLSMLLAARDEETGEPmsdqqlrDEVMT----LFLAGHETTANALSWTWYLLAQHPEVAARLRAEVDRVl 257
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1005574924 278 ----------PK------AIEEVLRYRSPAQRIVRKVKKEIQIRGQTLQVDQ--IISGWIgsANRDSLHFKDADSFNIHR 339
Cdd:cd20620   258 ggrpptaedlPQlpytemVLQESLRLYPPAWIIGREAVEDDEIGGYRIPAGStvLISPYV--THRDPRFWPDPEAFDPER 335
                         170       180       190       200
                  ....*....|....*....|....*....|....*....|....*
gi 1005574924 340 ------SRNPHLA---FGHGIHFCLGAPLARLEAKIVLTEIMKKY 375
Cdd:cd20620   336 ftpereAARPRYAyfpFGGGPRICIGNHFAMMEAVLLLATIAQRF 380
CYP5A1 cd20649
cytochrome P450 family 5, subfamily A, polypeptide 1, also called thromboxane-A synthase; ...
223-395 2.89e-15

cytochrome P450 family 5, subfamily A, polypeptide 1, also called thromboxane-A synthase; Cytochrome P450 5A1 (CYP5A1), also called thromboxane-A synthase (EC 5.3.99.5) or thromboxane synthetase, converts prostaglandin H2 into thromboxane A2, a biologically active metabolite of arachidonic acid that has been implicated in stroke, asthma, and various cardiovascular diseases, due to its acute and chronic effects in promoting platelet aggregation, vasoconstriction, bronchoconstriction, and proliferation. CYP5A1 belongs to the large cytochrome P450 (P450, CYP) superfamily of heme-containing proteins that catalyze a variety of oxidative reactions of a large number of structurally different endogenous and exogenous compounds in organisms from all major domains of life. CYPs bind their diverse ligands in a buried, hydrophobic active site, which is accessed through a substrate access channel formed by two flexible helices and their connecting loop.


Pssm-ID: 410742 [Multi-domain]  Cd Length: 457  Bit Score: 77.19  E-value: 2.89e-15
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1005574924 223 SEADKNISGKEVVSFCKLLLVAGNETTTNLLGNLLYCLIENPDVYKQIQQDVS------------------LVPKAIEEV 284
Cdd:cd20649   251 SKQKRMLTEDEIVGQAFIFLIAGYETTTNTLSFATYLLATHPECQKKLLREVDeffskhemvdyanvqelpYLDMVIAET 330
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1005574924 285 LRYRSPAQRIVRKVKKEIQIRGQTLQVDQIISGWIGSANRDSLHFKDADSFNIHR-------SRNP--HLAFGHGIHFCL 355
Cdd:cd20649   331 LRMYPPAFRFAREAAEDCVVLGQRIPAGAVLEIPVGFLHHDPEHWPEPEKFIPERftaeakqRRHPfvYLPFGAGPRSCI 410
                         170       180       190       200
                  ....*....|....*....|....*....|....*....|
gi 1005574924 356 GAPLARLEAKIVLTEIMKKYKSFSFIDHNLPVPISSVSSV 395
Cdd:cd20649   411 GMRLALLEIKVTLLHILRRFRFQACPETEIPLQLKSKSTL 450
CYP1_2-like cd20617
cytochrome P450 families 1 and 2, and similar cytochrome P450s; This model includes cytochrome ...
55-384 5.83e-15

cytochrome P450 families 1 and 2, and similar cytochrome P450s; This model includes cytochrome P450 families 1 (CYP1) and 2 (CYP2), CYP17A1, and CYP21 in vertebrates, as well as insect and crustacean CYPs similar to CYP15A1 and CYP306A1. CYP1 and CYP2 enzymes are involved in the metabolism of endogenous and exogenous compounds such as hormones, xenobiotics, and drugs. CYP17A1 catalyzes the conversion of pregnenolone and progesterone to their 17-alpha-hydroxylated products, while CYP21 catalyzes the 21-hydroxylation of steroids such as progesterone and 17-alpha-hydroxyprogesterone (17-alpha-OH-progesterone) to form 11-deoxycorticosterone and 11-deoxycortisol, respectively. Members of this group belongs to the large cytochrome P450 (P450, CYP) superfamily of heme-containing proteins that catalyze a variety of oxidative reactions of a large number of structurally different endogenous and exogenous compounds in organisms from all major domains of life. CYPs bind their diverse ligands in a buried, hydrophobic active site, which is accessed through a substrate access channel formed by two flexible helices and their connecting loop.


Pssm-ID: 410710 [Multi-domain]  Cd Length: 419  Bit Score: 76.10  E-value: 5.83e-15
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1005574924  55 YEDVKRVL-EDKEFFSN--IMPEKKKSPFPQSILGMDPPKHTQIRSIVNRSFTP-KSLKVWESRIQQITNDILIQLsnrD 130
Cdd:cd20617    19 PEIIKEAFvKNGDNFSDrpLLPSFEIISGGKGILFSNGDYWKELRRFALSSLTKtKLKKKMEELIEEEVNKLIESL---K 95
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1005574924 131 NFDIVQELFYPLPVI------VIAEML------GVSVNDMDRFKKWSDII---VSSPNHDDPD-YLKEFFHIRLQAENEL 194
Cdd:cd20617    96 KHSKSGEPFDPRPYFkkfvlnIINQFLfgkrfpDEDDGEFLKLVKPIEEIfkeLGSGNPSDFIpILLPFYFLYLKKLKKS 175
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1005574924 195 EEFFEEII--QINRGKSKKDSN-------DIISLLVQSEADKNISGKEVVSFCKLLLVAGNETTTNLLGNLLYCLIENPD 265
Cdd:cd20617   176 YDKIKDFIekIIEEHLKTIDPNnprdlidDELLLLLKEGDSGLFDDDSIISTCLDLFLAGTDTTSTTLEWFLLYLANNPE 255
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1005574924 266 VYKQIQQ---------------DVSLVP---KAIEEVLRYRSPAQRIV-RKVKKEIQIRGQTLQVD-QIISGwIGSANRD 325
Cdd:cd20617   256 IQEKIYEeidnvvgndrrvtlsDRSKLPylnAVIKEVLRLRPILPLGLpRVTTEDTEIGGYFIPKGtQIIIN-IYSLHRD 334
                         330       340       350       360       370       380
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1005574924 326 SLHFKDADSFNIHR----SRNPH----LAFGHGIHFCLGAPLARLEAKIVLTEIMKKYKsFSFIDHN 384
Cdd:cd20617   335 EKYFEDPEEFNPERflenDGNKLseqfIPFGIGKRNCVGENLARDELFLFFANLLLNFK-FKSSDGL 400
CYP60B-like cd11058
cytochrome P450 family 60, subfamily B and similar cytochrome P450s; This family is composed ...
69-372 2.84e-14

cytochrome P450 family 60, subfamily B and similar cytochrome P450s; This family is composed of fungal cytochrome P450s including: Aspergillus nidulans cytochrome P450 60B (CYP60B), also called versicolorin B desaturase, which catalyzes the conversion of versicolorin B to versicolorin A during sterigmatocystin biosynthesis; Fusarium sporotrichioides cytochrome P450 65A1 (CYP65A1), also called isotrichodermin C-15 hydroxylase, which catalyzes the hydroxylation at C-15 of isotricodermin in trichothecene biosynthesis; and Penicillium aethiopicum P450 monooxygenase vrtK, also called viridicatumtoxin synthesis protein K, which catalyzes the spirocyclization of the geranyl moiety of previridicatumtoxin to produce viridicatumtoxin, a tetracycline-like fungal meroterpenoid. The CYP60B-like family belongs to the large cytochrome P450 (P450, CYP) superfamily of heme-containing proteins that catalyze a variety of oxidative reactions of a large number of structurally different endogenous and exogenous compounds in organisms from all major domains of life. CYPs bind their diverse ligands in a buried, hydrophobic active site, which is accessed through a substrate access channel formed by two flexible helices and their connecting loop.


Pssm-ID: 410681 [Multi-domain]  Cd Length: 419  Bit Score: 73.77  E-value: 2.84e-14
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1005574924  69 SNIMPEKKKSPF--------PQSILGMDPPKHTQIRSIVNRSFTPKSLKVWESRIQQITNDILIQLSNR----DNFDIVq 136
Cdd:cd11058    27 PGGPKFPKKDPRfyppapngPPSISTADDEDHARLRRLLAHAFSEKALREQEPIIQRYVDLLVSRLRERagsgTPVDMV- 105
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1005574924 137 ELFYPLPVIVIAEM-LGVSVNDMDRFK------------KWSDIIVSSPNHDDPDYLKEFFHIRLQAENELEEFFEEIIQ 203
Cdd:cd11058   106 KWFNFTTFDIIGDLaFGESFGCLENGEyhpwvalifdsiKALTIIQALRRYPWLLRLLRLLIPKSLRKKRKEHFQYTREK 185
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1005574924 204 INRGKSKK-DSNDIIS-LLVQSEADKNISGKEVVSFCKLLLVAGNETTTNLLGNLLYCLIENPDVYKQIQQDV------- 274
Cdd:cd11058   186 VDRRLAKGtDRPDFMSyILRNKDEKKGLTREELEANASLLIIAGSETTATALSGLTYYLLKNPEVLRKLVDEIrsafsse 265
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1005574924 275 ------SLVP----KA-IEEVLRYRSPA----QRIVRKvkKEIQIRGQTLQVDQIISGWIGSANRDSLHFKDADSF---- 335
Cdd:cd11058   266 dditldSLAQlpylNAvIQEALRLYPPVpaglPRVVPA--GGATIDGQFVPGGTSVSVSQWAAYRSPRNFHDPDEFiper 343
                         330       340       350       360
                  ....*....|....*....|....*....|....*....|....*
gi 1005574924 336 --------NIHRSRNPHLAFGHGIHFCLGAPLARLEAKIVLTEIM 372
Cdd:cd11058   344 wlgdprfeFDNDKKEAFQPFSVGPRNCIGKNLAYAEMRLILAKLL 388
CYP72_clan cd11052
Plant cytochrome P450s, clan CYP72; CYPs have been classified into families and subfamilies ...
207-379 4.99e-14

Plant cytochrome P450s, clan CYP72; CYPs have been classified into families and subfamilies based on homology and phylogenetic criteria; family membership is defined as 40% amino acid sequence identity or higher. The plant CYPs have also been classified according to clans; land plants have 11 clans that form two groups: single-family clans (CYP51, CYP74, CYP97, CYP710, CYP711, CYP727, CYP746) and multi-family clans (CYP71, CYP72, CYP85, CYP86). The CYP72 clan is associated with the metabolism of a diversity of fairly hydrophobic compounds including fatty acids and isoprenoids, with the catabolism of hormones (brassinosteroids and gibberellin, GA) and with the biosynthesis of cytokinins. This clan includes: CYP734 enzymes that are involved in brassinosteroid (BRs) catabolism and regulation of BRs homeostasis; CYP714 enzymes that are involved in the biosynthesis of gibberellins (GAs) and the mechanism to control their bioactive endogenous levels; and CYP72 family enzymes, among others. The CYP72 clan belongs to the large cytochrome P450 (P450, CYP) superfamily of heme-containing proteins that catalyze a variety of oxidative reactions of a large number of structurally different endogenous and exogenous compounds in organisms from all major domains of life. CYPs bind their diverse ligands in a buried, hydrophobic active site, which is accessed through a substrate access channel formed by two flexible helices and their connecting loop.


Pssm-ID: 410675 [Multi-domain]  Cd Length: 427  Bit Score: 73.14  E-value: 4.99e-14
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1005574924 207 GKSKKDSNDIISLLVQS----EADKNISGKEVVSFCKLLLVAGNETTTNLLGNLLYCLIENPDVYKQIQQDV-------- 274
Cdd:cd11052   202 GRGDDYGDDLLGLLLEAnqsdDQNKNMTVQEIVDECKTFFFAGHETTALLLTWTTMLLAIHPEWQEKAREEVlevcgkdk 281
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1005574924 275 ---------SLVPKAIEEVLRYRSPAQRIVRKVKKEIQIRGQTLQVDQIISGWIGSANRD-SLHFKDADSFNIHR----- 339
Cdd:cd11052   282 ppsdslsklKTVSMVINESLRLYPPAVFLTRKAKEDIKLGGLVIPKGTSIWIPVLALHHDeEIWGEDANEFNPERfadgv 361
                         170       180       190       200
                  ....*....|....*....|....*....|....*....|....*
gi 1005574924 340 -----SRNPHLAFGHGIHFCLGAPLARLEAKIVLTEIMKKYkSFS 379
Cdd:cd11052   362 akaakHPMAFLPFGLGPRNCIGQNFATMEAKIVLAMILQRF-SFT 405
CYP24A1-like cd11054
cytochrome P450 family 24 subfamily A, polypeptide 1 and similar cytochrome P450s; This family ...
49-376 1.04e-13

cytochrome P450 family 24 subfamily A, polypeptide 1 and similar cytochrome P450s; This family is composed of vertebrate cytochrome P450 24A1 (CYP24A1) and similar proteins including several Drosophila proteins such as CYP315A1 (also called protein shadow) and CYP314A1 (also called ecdysone 20-monooxygenase), and vertebrate CYP11 and CYP27 subfamilies. Both CYP314A1 and CYP315A1, which has ecdysteroid C2-hydroxylase activity, are involved in the metabolism of insect hormones. CYP24A1 and CYP27B1 have roles in calcium homeostasis and metabolism, and the regulation of vitamin D. CYP24A1 catabolizes calcitriol (1,25(OH)2D), the physiologically active vitamin D hormone, by catalyzing its hydroxylation, while CYP27B1 is a calcidiol 1-monooxygenase that coverts 25-hydroxyvitamin D3 to calcitriol. The CYP24A1-like family belongs to the large cytochrome P450 (P450, CYP) superfamily of heme-containing proteins that catalyze a variety of oxidative reactions of a large number of structurally different endogenous and exogenous compounds in organisms from all major domains of life. CYPs bind their diverse ligands in a buried, hydrophobic active site, which is accessed through a substrate access channel formed by two flexible helices and their connecting loop.


Pssm-ID: 410677 [Multi-domain]  Cd Length: 426  Bit Score: 72.17  E-value: 1.04e-13
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1005574924  49 MWNVFLY--EDVKRVL--EDKeffsniMPE----------KKKSPFPQSILGMDPPKHTQIRSIVNRSFT-PKSLKVWES 113
Cdd:cd11054    15 RDIVHLFdpDDIEKVFrnEGK------YPIrpsleplekyRKKRGKPLGLLNSNGEEWHRLRSAVQKPLLrPKSVASYLP 88
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1005574924 114 RIQQITND---ILIQLSNRDNF---DIVQELF-YPLPVIVI-----------------AEMLGVSVNDMdrFKKWSDIIV 169
Cdd:cd11054    89 AINEVADDfveRIRRLRDEDGEevpDLEDELYkWSLESIGTvlfgkrlgclddnpdsdAQKLIEAVKDI--FESSAKLMF 166
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1005574924 170 SSPNH---DDPDYlKEFFhirlQAENELEEFFEEIIQ--INRGKSK-KDSNDIISLLVQSEADKNISGKEVVSFCKLLLV 243
Cdd:cd11054   167 GPPLWkyfPTPAW-KKFV----KAWDTIFDIASKYVDeaLEELKKKdEEDEEEDSLLEYLLSKPGLSKKEIVTMALDLLL 241
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1005574924 244 AGNETTTNLLGNLLYCLIENPDVYKQIQQDV-SLVP----------------KA-IEEVLRYRSPAQRIVRKVKKEIQIR 305
Cdd:cd11054   242 AGVDTTSNTLAFLLYHLAKNPEVQEKLYEEIrSVLPdgepitaedlkkmpylKAcIKESLRLYPVAPGNGRILPKDIVLS 321
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1005574924 306 G------QTLQVDQIISGwigsanRDSLHFKDADSF-------NIHRSRNPH----LAFGHGIHFCLGAPLARLEAKIVL 368
Cdd:cd11054   322 GyhipkgTLVVLSNYVMG------RDEEYFPDPEEFiperwlrDDSENKNIHpfasLPFGFGPRMCIGRRFAELEMYLLL 395

                  ....*...
gi 1005574924 369 TEIMKKYK 376
Cdd:cd11054   396 AKLLQNFK 403
CYP6-like cd11056
cytochrome P450 family 6 and similar cytochrome P450s; This family is composed of cytochrome ...
56-376 1.23e-13

cytochrome P450 family 6 and similar cytochrome P450s; This family is composed of cytochrome P450s from insects and crustaceans, including the CYP6, CYP9 and CYP310 subfamilies, which are involved in the metabolism of insect hormones and xenobiotic detoxification. The CYP6-like family belongs to the large cytochrome P450 (P450, CYP) superfamily of heme-containing proteins that catalyze a variety of oxidative reactions of a large number of structurally different endogenous and exogenous compounds in organisms from all major domains of life. CYPs bind their diverse ligands in a buried, hydrophobic active site, which is accessed through a substrate access channel formed by two flexible helices and their connecting loop.


Pssm-ID: 410679 [Multi-domain]  Cd Length: 429  Bit Score: 72.19  E-value: 1.23e-13
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1005574924  56 EDVKRVLEdKEF--FSN--IMPEKKKSPFPQSILGMDPPKHTQIRSIVNRSFTPKSLK----VWESRIQQITNDILIQLS 127
Cdd:cd11056    22 ELIKQILV-KDFahFHDrgLYSDEKDDPLSANLFSLDGEKWKELRQKLTPAFTSGKLKnmfpLMVEVGDELVDYLKKQAE 100
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1005574924 128 NRDNFDIvQELFYPLPVIVIAEM-LGVSVN----DMDRFKKWSDIIVSSPNHDDPDYLKEFFHIRLQAENELEEFFEEII 202
Cdd:cd11056   101 KGKELEI-KDLMARYTTDVIASCaFGLDANslndPENEFREMGRRLFEPSRLRGLKFMLLFFFPKLARLLRLKFFPKEVE 179
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1005574924 203 Q---------IN-RGKSKKDSNDIISLLVQ---------SEADKNISGKEVVSFCKLLLVAGNETTTNLLGNLLYCLIEN 263
Cdd:cd11056   180 DffrklvrdtIEyREKNNIVRNDFIDLLLElkkkgkiedDKSEKELTDEELAAQAFVFFLAGFETSSSTLSFALYELAKN 259
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1005574924 264 PDVYKQIQQDVSLVPKA-------------------IEEVLRYRSPAQRIVRKVKKEIQIRGQTLQVDQ----IISgwIG 320
Cdd:cd11056   260 PEIQEKLREEIDEVLEKhggeltyealqemkyldqvVNETLRKYPPLPFLDRVCTKDYTLPGTDVVIEKgtpvIIP--VY 337
                         330       340       350       360       370       380
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1005574924 321 SANRDSLHFKDADSFNIHR-------SRNPH--LAFGHGIHFCLGAPLARLEAKIVLTEIMKKYK 376
Cdd:cd11056   338 ALHHDPKYYPEPEKFDPERfspenkkKRHPYtyLPFGDGPRNCIGMRFGLLQVKLGLVHLLSNFR 402
CYPBJ-4-like cd20614
cytochrome P450 BJ-4 homolog and similar cytochrome P450s; This group is composed of mostly ...
83-364 1.71e-13

cytochrome P450 BJ-4 homolog and similar cytochrome P450s; This group is composed of mostly uncharacterized proteins including Sinorhizobium fredii CYPBJ-4 homolog. It belongs to the large cytochrome P450 (P450, CYP) superfamily of heme-containing proteins that catalyze a variety of oxidative reactions of a large number of structurally different endogenous and exogenous compounds in organisms from all major domains of life. CYPs bind their diverse ligands in a buried, hydrophobic active site, which is accessed through a substrate access channel formed by two flexible helices and their connecting loop.


Pssm-ID: 410707 [Multi-domain]  Cd Length: 406  Bit Score: 71.70  E-value: 1.71e-13
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1005574924  83 SILGMDPPKHTQIRSIVNRSFTPKSLKvwESRIQQITNDILIQ----LSNRDNFDIVQELfYPLPVIVIAEMLGVSVNDM 158
Cdd:cd20614    57 TMAAQDGALHRRARAASNPSFTPKGLS--AAGVGALIAEVIEAriraWLSRGDVAVLPET-RDLTLEVIFRILGVPTDDL 133
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1005574924 159 DrfkKWSD------IIVSSPNHDDP-----------DYLKEffhiRLQAeneleeffeeIIQINRGKSKKDSndIISLLV 221
Cdd:cd20614   134 P---EWRRqyrelfLGVLPPPVDLPgmparrsrrarAWIDA----RLSQ----------LVATARANGARTG--LVAALI 194
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1005574924 222 QS--EADKNISGKEVVSFCKLLLVAGNETTTNLLGNLLYCLIENPDVYKQIQQ------DVSLVPKAIE----------E 283
Cdd:cd20614   195 RArdDNGAGLSEQELVDNLRLLVLAGHETTASIMAWMVIMLAEHPAVWDALCDeaaaagDVPRTPAELRrfplaealfrE 274
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1005574924 284 VLRYRSPAQRIVRKVKKEIQIRGQTLQVDQ--IISGWIGSanRDSLHFKDADSFN----IHRSRNPH----LAFGHGIHF 353
Cdd:cd20614   275 TLRLHPPVPFVFRRVLEEIELGGRRIPAGThlGIPLLLFS--RDPELYPDPDRFRperwLGRDRAPNpvelLQFGGGPHF 352
                         330
                  ....*....|.
gi 1005574924 354 CLGAPLARLEA 364
Cdd:cd20614   353 CLGYHVACVEL 363
CYP136-like cd11045
putative cytochrome P450 family 136 and similar cytochrome P450s; This group is composed of ...
36-404 1.87e-13

putative cytochrome P450 family 136 and similar cytochrome P450s; This group is composed of Mycobacterium tuberculosis putative cytochrome P450 136 (CYP136) and similar proteins. It belongs to the large cytochrome P450 (P450, CYP) superfamily of heme-containing proteins that catalyze a variety of oxidative reactions of a large number of structurally different endogenous and exogenous compounds in organisms from all major domains of life. CYPs bind their diverse ligands in a buried, hydrophobic active site, which is accessed through a substrate access channel formed by two flexible helices and their connecting loop.


Pssm-ID: 410671 [Multi-domain]  Cd Length: 407  Bit Score: 71.58  E-value: 1.87e-13
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1005574924  36 REKEPIYFNSQADMWNVFLY--EDVKRVL--EDKEFFSNIMPEKKKSP-FPQSILGMDPPKHTQIRSIVNRSFTPKSLKV 110
Cdd:cd11045     8 RRYGPVSWTGMLGLRVVALLgpDANQLVLrnRDKAFSSKQGWDPVIGPfFHRGLMLLDFDEHRAHRRIMQQAFTRSALAG 87
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1005574924 111 WESRIQQITNDILIQLSNRDNFDivqelFYP----LPVIVIAEM-LGVSVND-MDRFKKWSDIIVSSPN----------- 173
Cdd:cd11045    88 YLDRMTPGIERALARWPTGAGFQ-----FYPaikeLTLDLATRVfLGVDLGPeADKVNKAFIDTVRASTaiirtpipgtr 162
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1005574924 174 ----HDDPDYLKEFFHIRLQAeneleeffeeiiqinrgKSKKDSNDIISLLVQSEAD--KNISGKEVVSFCKLLLVAGNE 247
Cdd:cd11045   163 wwrgLRGRRYLEEYFRRRIPE-----------------RRAGGGDDLFSALCRAEDEdgDRFSDDDIVNHMIFLMMAAHD 225
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1005574924 248 TTTNLLGNLLYCLIENPDVYKQIQQDVSLVPK----------------AIEEVLRYRSPAQRIVRKVKKEIQIRGQTLQV 311
Cdd:cd11045   226 TTTSTLTSMAYFLARHPEWQERLREESLALGKgtldyedlgqlevtdwVFKEALRLVPPVPTLPRRAVKDTEVLGYRIPA 305
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1005574924 312 DQIISGWIGSANRDSLHFKDADSFNIHR---SRNPH-------LAFGHGIHFCLGAPLARLEAKIVLTEIMKKYKSFSFI 381
Cdd:cd11045   306 GTLVAVSPGVTHYMPEYWPNPERFDPERfspERAEDkvhryawAPFGGGAHKCIGLHFAGMEVKAILHQMLRRFRWWSVP 385
                         410       420
                  ....*....|....*....|....*...
gi 1005574924 382 D-----HNLPVPISSVssvyglkSLPVK 404
Cdd:cd11045   386 GyyppwWQSPLPAPKD-------GLPVV 406
CYP_FUM15-like cd11069
Fusarium verticillioides cytochrome P450 monooxygenase FUM15, and similar cytochrome P450s; ...
203-380 3.30e-13

Fusarium verticillioides cytochrome P450 monooxygenase FUM15, and similar cytochrome P450s; Fusarium verticillioides cytochrome P450 monooxygenase FUM15, is also called fumonisin biosynthesis cluster protein 15. The FUM15 gene is part of the gene cluster that mediates the biosynthesis of fumonisins B1, B2, B3, and B4, which are carcinogenic mycotoxins. This FUM15-like subfamily belongs to the large cytochrome P450 (P450, CYP) superfamily of heme-containing proteins that catalyze a variety of oxidative reactions of a large number of structurally different endogenous and exogenous compounds in organisms from all major domains of life. CYPs bind their diverse ligands in a buried, hydrophobic active site, which is accessed through a substrate access channel formed by two flexible helices and their connecting loop.


Pssm-ID: 410692 [Multi-domain]  Cd Length: 437  Bit Score: 70.76  E-value: 3.30e-13
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1005574924 203 QINRGKSKkDSNDIISLLVQSEA---DKNISGKEVVSFCKLLLVAGNETTTNLLGNLLYCLIENPDV--------YKQIQ 271
Cdd:cd11069   203 ALLEGKDD-SGKDILSILLRANDfadDERLSDEELIDQILTFLAAGHETTSTALTWALYLLAKHPDVqerlreeiRAALP 281
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1005574924 272 QDVSLVPKAIE------------EVLRYRSPAQRIVRK-----VKKEIQI-RGQTLqvdqIISgwIGSANRD-SLHFKDA 332
Cdd:cd11069   282 DPPDGDLSYDDldrlpylnavcrETLRLYPPVPLTSREatkdtVIKGVPIpKGTVV----LIP--PAAINRSpEIWGPDA 355
                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1005574924 333 DSFN----IHRSRNPH----------LAFGHGIHFCLGAPLARLEAKIVLTEIMkkyKSFSF 380
Cdd:cd11069   356 EEFNperwLEPDGAASpggagsnyalLTFLHGPRSCIGKKFALAEMKVLLAALV---SRFEF 414
CYP120A1 cd11068
cytochrome P450 family 102, subfamily A, polypeptide 1, also called bifunctional cytochrome ...
226-383 5.66e-13

cytochrome P450 family 102, subfamily A, polypeptide 1, also called bifunctional cytochrome P450/NADPH--P450 reductase; Cytochrome P450 102A1, also called cytochrome P450(BM-3) or P450BM-3, is a bifunctional cytochrome P450/NADPH--P450 reductase. These proteins fuse an N-terminal cytochrome p450 with a C-terminal cytochrome p450 reductase (CYPOR). It functions as a fatty acid monooxygenase, catalyzing the hydroxylation of fatty acids at omega-1, omega-2 and omega-3 positions, with activity towards fatty acids with a chain length of 9-18 carbons. Its NADPH-dependent reductase activity (via the C-terminal domain) allows electron transfer from NADPH to the heme iron of the N-terminal cytochrome P450. CYP120A1 belongs to the large cytochrome P450 (P450, CYP) superfamily of heme-containing proteins that catalyze a variety of oxidative reactions of a large number of structurally different endogenous and exogenous compounds in organisms from all major domains of life. CYPs bind their diverse ligands in a buried, hydrophobic active site, which is accessed through a substrate access channel formed by two flexible helices and their connecting loop.


Pssm-ID: 410691 [Multi-domain]  Cd Length: 430  Bit Score: 69.91  E-value: 5.66e-13
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1005574924 226 DKNISGkEVVSFckllLVAGNETTTNLLGNLLYCLIENPDVYKQIQQDVSLV-----------------PKAIEEVLRYR 288
Cdd:cd11068   228 DENIRY-QMITF----LIAGHETTSGLLSFALYYLLKNPEVLAKARAEVDEVlgddpppyeqvaklryiRRVLDETLRLW 302
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1005574924 289 SPAQRIVRKVKKEIQIRGQ-TLQVDQIISGWIGSANRD-SLHFKDADSFNIHR-------SRNPHL--AFGHGIHFCLGA 357
Cdd:cd11068   303 PTAPAFARKPKEDTVLGGKyPLKKGDPVLVLLPALHRDpSVWGEDAEEFRPERflpeefrKLPPNAwkPFGNGQRACIGR 382
                         170       180
                  ....*....|....*....|....*.
gi 1005574924 358 PLARLEAKIVLTEIMKKyksFSFIDH 383
Cdd:cd11068   383 QFALQEATLVLAMLLQR---FDFEDD 405
CYP46A1-like cd20613
cytochrome P450 family 46, subfamily A, polypeptide 1, also called cholesterol 24-hydroxylase, ...
203-383 8.37e-13

cytochrome P450 family 46, subfamily A, polypeptide 1, also called cholesterol 24-hydroxylase, and similar cytochrome P450s; CYP46A1 is also called cholesterol 24-hydroxylase (EC 1.14.14.25), CH24H, cholesterol 24-monooxygenase, or cholesterol 24S-hydroxylase. It catalyzes the conversion of cholesterol into 24S-hydroxycholesterol and, to a lesser extent, 25-hydroxycholesterol. CYP46A1 is associated with high-order brain functions; increased expression improves cognition while a reduction leads to a poor cognitive performance. It also plays a role in the pathogenesis or progression of neurodegenerative disorders. CYP46A1 belongs to the large cytochrome P450 (P450, CYP) superfamily of heme-containing proteins that catalyze a variety of oxidative reactions of a large number of structurally different endogenous and exogenous compounds in organisms from all major domains of life. CYPs bind their diverse ligands in a buried, hydrophobic active site, which is accessed through a substrate access channel formed by two flexible helices and their connecting loop.


Pssm-ID: 410706 [Multi-domain]  Cd Length: 429  Bit Score: 69.47  E-value: 8.37e-13
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1005574924 203 QINRGKSkkDSNDIISLLVQSEADKNISGKE-----VVSFckllLVAGNETTTNLLGNLLYCLIENPDVYKQIQQDV--- 274
Cdd:cd20613   205 ALKRGEE--VPNDILTHILKASEEEPDFDMEellddFVTF----FIAGQETTANLLSFTLLELGRHPEILKRLQAEVdev 278
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1005574924 275 ------------------SLVPKaieEVLRYRSPAQRIVRKVKKEIQI------RGQTLQVDQIISGwigsanRDSLHFK 330
Cdd:cd20613   279 lgskqyveyedlgkleylSQVLK---ETLRLYPPVPGTSRELTKDIELggykipAGTTVLVSTYVMG------RMEEYFE 349
                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1005574924 331 DADSFNIHR------SRNPHLA---FGHGIHFCLGAPLARLEAKIVLTEIMKKYK-------SFSFIDH 383
Cdd:cd20613   350 DPLKFDPERfspeapEKIPSYAyfpFSLGPRSCIGQQFAQIEAKVILAKLLQNFKfelvpgqSFGILEE 418
PLN02302 PLN02302
ent-kaurenoic acid oxidase
56-395 5.35e-12

ent-kaurenoic acid oxidase


Pssm-ID: 215171 [Multi-domain]  Cd Length: 490  Bit Score: 67.05  E-value: 5.35e-12
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1005574924  56 EDVKRVLEDKEFFSNIMPEKKKSPF-PQSILGMDPPKHTQIRSIVNRSFT-PKSLKVWESRIQQITNDILIQLSNRDNFD 133
Cdd:PLN02302  101 EACKRVLTDDDAFEPGWPESTVELIgRKSFVGITGEEHKRLRRLTAAPVNgPEALSTYIPYIEENVKSCLEKWSKMGEIE 180
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1005574924 134 IVQELfyplpviviaemlgvsvnDMDRFKKWSDIIVSSPNHDDPDYLKEFFH-----IR--------------LQAENEL 194
Cdd:PLN02302  181 FLTEL------------------RKLTFKIIMYIFLSSESELVMEALEREYTtlnygVRamainlpgfayhraLKARKKL 242
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1005574924 195 EEFFEEIIQINRGKSKKDSN----DIISLL--VQSEADKNISGKEVVSFCKLLLVAGNETTTNLLGNLLYCLIENPDVYK 268
Cdd:PLN02302  243 VALFQSIVDERRNSRKQNISprkkDMLDLLldAEDENGRKLDDEEIIDLLLMYLNAGHESSGHLTMWATIFLQEHPEVLQ 322
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1005574924 269 QI--------------QQDVSL--------VPKAIEEVLRYRSPAQRIVRKVKKEIQIRGQTLQVDQIISGWIGSANRDS 326
Cdd:PLN02302  323 KAkaeqeeiakkrppgQKGLTLkdvrkmeyLSQVIDETLRLINISLTVFREAKTDVEVNGYTIPKGWKVLAWFRQVHMDP 402
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1005574924 327 LHFKDADSFNIHRSRNP------HLAFGHGIHFCLGAPLARLEAKIVLTEIMKKYK--------SFSFIDH-----NLPV 387
Cdd:PLN02302  403 EVYPNPKEFDPSRWDNYtpkagtFLPFGLGSRLCPGNDLAKLEISIFLHHFLLGYRlerlnpgcKVMYLPHprpkdNCLA 482

                  ....*...
gi 1005574924 388 PISSVSSV 395
Cdd:PLN02302  483 RITKVASE 490
CYP_fungal cd11059
unknown subfamily of fungal cytochrome P450s; This subfamily is composed of uncharacterized ...
208-382 1.78e-11

unknown subfamily of fungal cytochrome P450s; This subfamily is composed of uncharacterized fungal cytochrome P450s. Cytochrome P450 (P450, CYP) is a large superfamily of heme-containing proteins that catalyze a variety of oxidative reactions of a large number of structurally different endogenous and exogenous compounds in organisms from all major domains of life. CYPs bind their diverse ligands in a buried, hydrophobic active site, which is accessed through a substrate access channel formed by two flexible helices and their connecting loop. Their monooxygenase activity relies on the reductive scission of molecular oxygen bound to the P450 heme iron, and the delivery of two electrons to the heme iron during the catalytic cycle.


Pssm-ID: 410682 [Multi-domain]  Cd Length: 422  Bit Score: 65.40  E-value: 1.78e-11
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1005574924 208 KSKKDSNDIISLLVQSEADKN------ISGKEVVSFCKLLLVAGNETTTNLLGNLLYCLIENPDVYKQIQQ---DVSLVP 278
Cdd:cd11059   190 SSLAESSDSESLTVLLLEKLKglkkqgLDDLEIASEALDHIVAGHDTTAVTLTYLIWELSRPPNLQEKLREelaGLPGPF 269
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1005574924 279 KA----------------IEEVLRYRSPA----QRIVRKvkkeiqiRGQTLQVDQIISGWIGSANRDSLH-----FKDAD 333
Cdd:cd11059   270 RGppdledldklpylnavIRETLRLYPPIpgslPRVVPE-------GGATIGGYYIPGGTIVSTQAYSLHrdpevFPDPE 342
                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|
gi 1005574924 334 SFNIHRSRNPH-----------LAFGHGIHFCLGAPLARLEAKIVLTEIMKKYKSFSFID 382
Cdd:cd11059   343 EFDPERWLDPSgetaremkrafWPFGSGSRMCIGMNLALMEMKLALAAIYRNYRTSTTTD 402
CYP_XplA cd20619
cytochrome P450 XplA; XplA is a cytochrome P450 that was found to mediate the microbial ...
80-402 2.26e-11

cytochrome P450 XplA; XplA is a cytochrome P450 that was found to mediate the microbial metabolism of the military explosive, hexahydro-1,3,5-trinitro-1,3,5-triazine (RDX). XplA has an unusual structural organization comprising a heme domain that is fused to its flavodoxin redox partner. XplA, along with its partner reductase XplB, are plasmid encoded and the xplA gene has now been found in divergent genera across the globe with near sequence identity. It has only been detected at explosive-contaminated sites, suggesting rapid dissemination of this novel catabolic activity, possibly within a 50-year period since the introduction of RDX into the environment. XplA belongs to the large cytochrome P450 (P450, CYP) superfamily of heme-containing proteins that catalyze a variety of oxidative reactions of a large number of structurally different endogenous and exogenous compounds in organisms from all major domains of life. CYPs bind their diverse ligands in a buried, hydrophobic active site, which is accessed through a substrate access channel formed by two flexible helices and their connecting loop.


Pssm-ID: 410712 [Multi-domain]  Cd Length: 358  Bit Score: 64.76  E-value: 2.26e-11
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1005574924  80 FPQSILGMDPPKHTQIRSIVNRSFTPKSLKVWESRIQQITNDILIQLSNRDNFDIVQELFYPLPVIVIAEMLGVSVNDMD 159
Cdd:cd20619    43 ASDTALGSDPPHHTVLRRQTNKWFTPKLVDGWVRTTRELVGDLLDGVEAGQVIEARRDLAVVPTHVTMARVLQLPEDDAD 122
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1005574924 160 ----RFKKWSDIIVSSPNHDDPDYLKEFFHIRLQAENELEeffeeiiqinrgKSKKDSNDI--ISLLVQSEADKNISGKE 233
Cdd:cd20619   123 avmeAMFEAMLMQSAEPADGDVDRAAVAFGYLSARVAEML------------EDKRVNPGDglADSLLDAARAGEITESE 190
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1005574924 234 VVSFCKLLLVAGNETTTNLLGNLLYCLIENPDVYKQIQQDVSLVPKAIEEVLRYRSPAQRIVRKVKKEIQIRGQTLQVDQ 313
Cdd:cd20619   191 AIATILVFYAVGHMAIGYLIASGIELFARRPEVFTAFRNDESARAAIINEMVRMDPPQLSFLRFPTEDVEIGGVLIEAGS 270
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1005574924 314 IISGWIGSANRDSLHFKDADSFNIHR--SRNPHLAFGHGIHFCLGAPLARLEAKIVLTEIMKKYKSFSFIDHnlpVPISS 391
Cdd:cd20619   271 PIRFMIGAANRDPEVFDDPDVFDHTRppAASRNLSFGLGPHSCAGQIISRAEATTVFAVLAERYERIELAEE---PTVAH 347
                         330
                  ....*....|.
gi 1005574924 392 VSSVYGLKSLP 402
Cdd:cd20619   348 NDFARRYRKLP 358
CYP3A cd20650
cytochrome P450 family 3, subfamily A; The cytochrome P450 3A (CYP3A) subfamily, the most ...
202-380 3.97e-11

cytochrome P450 family 3, subfamily A; The cytochrome P450 3A (CYP3A) subfamily, the most abundant CYP subfamily in the liver, consists of drug-metabolizing enzymes. In humans, there are at least four isoforms: CYP3A4, 3A5, 3A7, and 3A3. CYP3A enzymes are embedded in the endoplasmic reticulum, where they can catalyze a wide variety of biochemical reactions including hydroxylation, N-demethylation, O-dealkylation, S-oxidation, deamination, or epoxidation of substrates. They oxidize a variety of structurally unrelated compounds including steroids, fatty acids, and xenobiotics. The CYP3A subfamily belongs to the large cytochrome P450 (P450, CYP) superfamily of heme-containing proteins that catalyze a variety of oxidative reactions of a large number of structurally different endogenous and exogenous compounds in organisms from all major domains of life. CYPs bind their diverse ligands in a buried, hydrophobic active site, which is accessed through a substrate access channel formed by two flexible helices and their connecting loop.


Pssm-ID: 410743 [Multi-domain]  Cd Length: 426  Bit Score: 64.36  E-value: 3.97e-11
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1005574924 202 IQINRGKSKKDSN-DIISLLVQS------EADKNISGKEVVSFCKLLLVAGNETTTNLLGNLLYCLIENPDVYKQIQQ-- 272
Cdd:cd20650   190 IKESRLDSTQKHRvDFLQLMIDSqnsketESHKALSDLEILAQSIIFIFAGYETTSSTLSFLLYELATHPDVQQKLQEei 269
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1005574924 273 DVSLVPKA----------------IEEVLRYRSPAQRIVRKVKKEIQIRGQTLQVDQIISGWIGSANRDSLHFKDADSFN 336
Cdd:cd20650   270 DAVLPNKApptydtvmqmeyldmvVNETLRLFPIAGRLERVCKKDVEINGVFIPKGTVVMIPTYALHRDPQYWPEPEEFR 349
                         170       180       190       200       210
                  ....*....|....*....|....*....|....*....|....*....|...
gi 1005574924 337 IHR-------SRNPH--LAFGHGIHFCLGAPLARLEAKIVLTEIMkkyKSFSF 380
Cdd:cd20650   350 PERfskknkdNIDPYiyLPFGSGPRNCIGMRFALMNMKLALVRVL---QNFSF 399
PLN02987 PLN02987
Cytochrome P450, family 90, subfamily A
207-375 5.89e-11

Cytochrome P450, family 90, subfamily A


Pssm-ID: 166628 [Multi-domain]  Cd Length: 472  Bit Score: 63.84  E-value: 5.89e-11
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1005574924 207 GKSKKdsNDIISLLVQSeaDKNISGKEVVSFCKLLLVAGNETTTNLLGNLLYCLIENPDVYKQIQQDVSLV------PKA 280
Cdd:PLN02987  245 GAEKK--KDMLAALLAS--DDGFSDEEIVDFLVALLVAGYETTSTIMTLAVKFLTETPLALAQLKEEHEKIramksdSYS 320
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1005574924 281 IE---------------EVLRYRSPAQRIVRKVKKEIQIRGQTlqvdqIISGW-IGSANR----DSLHFKDADSFNIHRS 340
Cdd:PLN02987  321 LEwsdyksmpftqcvvnETLRVANIIGGIFRRAMTDIEVKGYT-----IPKGWkVFASFRavhlDHEYFKDARTFNPWRW 395
                         170       180       190       200
                  ....*....|....*....|....*....|....*....|....
gi 1005574924 341 RNPHLA---------FGHGIHFCLGAPLARLEAKIVLTEIMKKY 375
Cdd:PLN02987  396 QSNSGTtvpsnvftpFGGGPRLCPGYELARVALSVFLHRLVTRF 439
CYP734 cd20639
cytochrome P450 family 734; Cytochrome P450 family 734 (CYP734) belongs to the plant CYP72 ...
207-375 1.30e-10

cytochrome P450 family 734; Cytochrome P450 family 734 (CYP734) belongs to the plant CYP72 clan, which is generally associated with the metabolism of a diversity of fairly hydrophobic compounds including fatty acids and isoprenoids, with the catabolism of hormones (brassinosteroids and gibberellin, GA) and with the biosynthesis of cytokinins. CYP734As function as multisubstrate and multifunctional enzymes in brassinosteroid (BRs) catabolism and regulation of BRs homeostasis. Arabidopsis thaliana CYP734A1/BAS1 (formerly CYP72B1) inactivates bioactive brassinosteroids such as castasterone (CS) and brassinolide (BL) by C-26 hydroxylation. Rice CYP734As can catalyze C-22 hydroxylation as well as second and third oxidations to produce aldehyde and carboxylate groups at C-26. CYP734 belongs to the large cytochrome P450 (P450, CYP) superfamily of heme-containing proteins that catalyze a variety of oxidative reactions of a large number of structurally different endogenous and exogenous compounds in organisms from all major domains of life. CYPs bind their diverse ligands in a buried, hydrophobic active site, which is accessed through a substrate access channel formed by two flexible helices and their connecting loop.


Pssm-ID: 410732 [Multi-domain]  Cd Length: 428  Bit Score: 62.85  E-value: 1.30e-10
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1005574924 207 GKSKKDSNDIISLLVQSEADKN---ISGKEVVSFCKLLLVAGNETTTNLLGNLLYCLIENPD--------VY-------- 267
Cdd:cd20639   203 EKDDEDSKDLLGLMISAKNARNgekMTVEEIIEECKTFFFAGKETTSNLLTWTTVLLAMHPEwqerarreVLavcgkgdv 282
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1005574924 268 --KQIQQDVSLVPKAIEEVLRYRSPAQRIVRKVKKEIQIRGQTLQVDQIISGWIGSANRDS-LHFKDADSFNIHRSRNP- 343
Cdd:cd20639   283 ptKDHLPKLKTLGMILNETLRLYPPAVATIRRAKKDVKLGGLDIPAGTELLIPIMAIHHDAeLWGNDAAEFNPARFADGv 362
                         170       180       190       200
                  ....*....|....*....|....*....|....*....|.
gi 1005574924 344 -----HLA----FGHGIHFCLGAPLARLEAKIVLTEIMKKY 375
Cdd:cd20639   363 araakHPLafipFGLGPRTCVGQNLAILEAKLTLAVILQRF 403
CYP97 cd11046
cytochrome P450 family/clan 97; CYPs have been classified into families and subfamilies based ...
209-376 2.18e-10

cytochrome P450 family/clan 97; CYPs have been classified into families and subfamilies based on homology and phylogenetic criteria; family membership is defined as 40% amino acid sequence identity or higher. The plant CYPs have also been classified according to clans; land plants have 11 clans that form two groups: single-family clans (CYP51, CYP74, CYP97, CYP710, CYP711, CYP727, CYP746) and multi-family clans (CYP71, CYP72, CYP85, CYP86). Members of the CYP97 clan include Arabidopsis thaliana cytochrome P450s 97A3 (CYP97A3), CYP97B3, and CYP97C1. CYP97A3 is also called protein LUTEIN DEFICIENT 5 (LUT5) and CYP97C1 is also called carotene epsilon-monooxygenase or protein LUTEIN DEFICIENT 1 (LUT1). These cytochromes function as beta- and epsilon-ring carotenoid hydroxylases and are involved in the biosynthesis of xanthophylls. CYP97 belongs to the large cytochrome P450 (P450, CYP) superfamily of heme-containing proteins that catalyze a variety of oxidative reactions of a large number of structurally different endogenous and exogenous compounds in organisms from all major domains of life. CYPs bind their diverse ligands in a buried, hydrophobic active site, which is accessed through a substrate access channel formed by two flexible helices and their connecting loop.


Pssm-ID: 410672 [Multi-domain]  Cd Length: 441  Bit Score: 62.00  E-value: 2.18e-10
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1005574924 209 SKKDSNDIISLLVQSEaDKNISGKEVVSFCKLLLVAGNETTTNLLGNLLYCLIENPDVYKQIQQDVSLV----------- 277
Cdd:cd11046   217 LNEDDPSLLRFLVDMR-DEDVDSKQLRDDLMTMLIAGHETTAAVLTWTLYELSQNPELMAKVQAEVDAVlgdrlpptyed 295
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1005574924 278 -------PKAIEEVLR-YRSPAQRIVRKVKKEIQ-------IRGQtlqvDQIISGWigSANRDSLHFKDADSFNIHR--- 339
Cdd:cd11046   296 lkklkytRRVLNESLRlYPQPPVLIRRAVEDDKLpgggvkvPAGT----DIFISVY--NLHRSPELWEDPEEFDPERfld 369
                         170       180       190       200
                  ....*....|....*....|....*....|....*....|....*..
gi 1005574924 340 --SRNPH--------LAFGHGIHFCLGAPLARLEAKIVLTEIMKKYK 376
Cdd:cd11046   370 pfINPPNeviddfafLPFGGGPRKCLGDQFALLEATVALAMLLRRFD 416
CYP72 cd20642
cytochrome P450 family 72; Cytochrome P450 family 72 (CYP72) belongs to the plant CYP72 clan, ...
204-380 2.73e-10

cytochrome P450 family 72; Cytochrome P450 family 72 (CYP72) belongs to the plant CYP72 clan, which is generally associated with the metabolism of a diversity of fairly hydrophobic compounds including fatty acids and isoprenoids, with the catabolism of hormones (brassinosteroids and gibberellin, GA) and with the biosynthesis of cytokinins. Characterized members, among others, include: Catharanthus roseus cytochrome P450 72A1 (CYP72A1), also called secologanin synthase (EC 1.3.3.9), that catalyzes the conversion of loganin into secologanin, the precursor of monoterpenoid indole alkaloids and ipecac alkaloids; Medicago truncatula CYP72A67 that catalyzes a key oxidative step in hemolytic sapogenin biosynthesis; and Arabidopsis thaliana CYP72C1, an atypical CYP that acts on brassinolide precursors and functions as a brassinosteroid-inactivating enzyme. This family also includes Panax ginseng CYP716A47 that catalyzes the formation of protopanaxadiol from dammarenediol-II during ginsenoside biosynthesis. CYP72 belongs to the large cytochrome P450 (P450, CYP) superfamily of heme-containing proteins that catalyze a variety of oxidative reactions of a large number of structurally different endogenous and exogenous compounds in organisms from all major domains of life. CYPs bind their diverse ligands in a buried, hydrophobic active site, which is accessed through a substrate access channel formed by two flexible helices and their connecting loop.


Pssm-ID: 410735 [Multi-domain]  Cd Length: 431  Bit Score: 61.91  E-value: 2.73e-10
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1005574924 204 INRGKSKKDsnDIISLLVQS-------EADKNI--SGKEVVSFCKLLLVAGNETTTNLLGNLLYCLIENPDVYKQIQQDV 274
Cdd:cd20642   198 MKAGEATND--DLLGILLESnhkeikeQGNKNGgmSTEDVIEECKLFYFAGQETTSVLLVWTMVLLSQHPDWQERAREEV 275
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1005574924 275 S-----------------LVPKAIEEVLRYRSPAQRIVRKVKKEIQIRGQTLQVDQIISGWIGSANRDS-LHFKDADSFN 336
Cdd:cd20642   276 LqvfgnnkpdfeglnhlkVVTMILYEVLRLYPPVIQLTRAIHKDTKLGDLTLPAGVQVSLPILLVHRDPeLWGDDAKEFN 355
                         170       180       190       200       210
                  ....*....|....*....|....*....|....*....|....*....|....
gi 1005574924 337 IHR----------SRNPHLAFGHGIHFCLGAPLARLEAKIVLTEIMKKyksFSF 380
Cdd:cd20642   356 PERfaegiskatkGQVSYFPFGWGPRICIGQNFALLEAKMALALILQR---FSF 406
CYP56-like cd11070
cytochrome P450 family 56-like fungal cytochrome P450s; This group includes Saccharomyces ...
203-376 2.75e-10

cytochrome P450 family 56-like fungal cytochrome P450s; This group includes Saccharomyces cerevisiae cytochrome P450 56, also called cytochrome P450-DIT2, and similar fungal proteins. CYP56 is involved in spore wall maturation and is thought to catalyze the oxidation of tyrosine residues in the formation of LL-dityrosine-containing precursors of the spore wall. The CYP56-like subfamily belongs to the large cytochrome P450 (P450, CYP) superfamily of heme-containing proteins that catalyze a variety of oxidative reactions of a large number of structurally different endogenous and exogenous compounds in organisms from all major domains of life. CYPs bind their diverse ligands in a buried, hydrophobic active site, which is accessed through a substrate access channel formed by two flexible helices and their connecting loop.


Pssm-ID: 410693 [Multi-domain]  Cd Length: 438  Bit Score: 61.58  E-value: 2.75e-10
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1005574924 203 QINRGKSKKDSNDIISLLVQSEADKN--ISGKEVVSFCKLLLVAGNETTTNLLGNLLYCLIENPDVYKQIQQDVSLV--- 277
Cdd:cd11070   191 ELSADSKGKQGTESVVASRLKRARRSggLTEKELLGNLFIFFIAGHETTANTLSFALYLLAKHPEVQDWLREEIDSVlgd 270
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1005574924 278 -----------PKA------IEEVLRYRSPAQRIVRKVKKEIQIRGQTLQVDQIISG-WIG----SANRD-SLHFKDADS 334
Cdd:cd11070   271 epddwdyeedfPKLpyllavIYETLRLYPPVQLLNRKTTEPVVVITGLGQEIVIPKGtYVGynayATHRDpTIWGPDADE 350
                         170       180       190       200       210
                  ....*....|....*....|....*....|....*....|....*....|....*...
gi 1005574924 335 FN----------------IHRSRNPHLAFGHGIHFCLGAPLARLEAKIVLTEIMKKYK 376
Cdd:cd11070   351 FDperwgstsgeigaatrFTPARGAFIPFSAGPRACLGRKFALVEFVAALAELFRQYE 408
CYP2 cd11026
cytochrome P450 family 2; The cytochrome P450 family 2 (CYP2 or Cyp2) is one of the largest, ...
241-380 3.84e-10

cytochrome P450 family 2; The cytochrome P450 family 2 (CYP2 or Cyp2) is one of the largest, most diverse CYP families in vertebrates. It includes many subfamilies across vertebrate species but not all subfamilies are found in multiple vertebrate taxonomic classes. The CYP2U and CYP2R genes are present in the vertebrate ancestor and are shared across all vertebrate classes, whereas some subfamilies are lineage-specific, such as CYP2B and CYP2S in mammals. CYP2 enzymes play important roles in drug metabolism. The CYP2 family belongs to the large cytochrome P450 (P450, CYP) superfamily of heme-containing proteins that catalyze a variety of oxidative reactions of a large number of structurally different endogenous and exogenous compounds in organisms from all major domains of life. CYPs bind their diverse ligands in a buried, hydrophobic active site, which is accessed through a substrate access channel formed by two flexible helices and their connecting loop.


Pssm-ID: 410652 [Multi-domain]  Cd Length: 425  Bit Score: 61.42  E-value: 3.84e-10
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1005574924 241 LLVAGNETTTNLLGNLLYCLIENPDVYKQIQQDvslvpkaIEEVL-RYRSP-----------------AQR--------I 294
Cdd:cd11026   234 LFFAGTETTSTTLRWALLLLMKYPHIQEKVQEE-------IDRVIgRNRTPsledrakmpytdaviheVQRfgdivplgV 306
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1005574924 295 VRKVKKEIQIRGQTLQVDQIISGWIGSANRDSLHFKDADSFNIH---------RSRNPHLAFGHGIHFCLGAPLARLEAK 365
Cdd:cd11026   307 PHAVTRDTKFRGYTIPKGTTVIPNLTSVLRDPKQWETPEEFNPGhfldeqgkfKKNEAFMPFSAGKRVCLGEGLARMELF 386
                         170
                  ....*....|....*
gi 1005574924 366 IVLTEIMKKYkSFSF 380
Cdd:cd11026   387 LFFTSLLQRF-SLSS 400
CYP15A1-like cd20651
cytochrome P450 family 15, subfamily A, polypeptide 1, and similar cytochrome P450s; This ...
222-388 4.02e-10

cytochrome P450 family 15, subfamily A, polypeptide 1, and similar cytochrome P450s; This subfamily is composed of insect and crustacean cytochrome P450s including Diploptera punctata cytochrome P450 15A1 (CYP15A1 or CYP15A1), Panulirus argus CYP2L1, and CYP303A1, CYP304A1, and CYP305A1 from Drosophila melanogaster. CYP15A1, also called methyl farnesoate epoxidase, catalyzes the conversion of methyl farnesoate to juvenile hormone III acid during juvenile hormone biosynthesis. CYP303A1, CYP304A1, and CYP305A1 may be involved in the metabolism of insect hormones and in the breakdown of synthetic insecticides. The CYP15A1-like subfamily belongs to the large cytochrome P450 (P450, CYP) superfamily of heme-containing proteins that catalyze a variety of oxidative reactions of a large number of structurally different endogenous and exogenous compounds in organisms from all major domains of life. CYPs bind their diverse ligands in a buried, hydrophobic active site, which is accessed through a substrate access channel formed by two flexible helices and their connecting loop.


Pssm-ID: 410744 [Multi-domain]  Cd Length: 423  Bit Score: 61.08  E-value: 4.02e-10
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1005574924 222 QSEADKNISGKEVVSFCKLLLVAGNETTTNLLGNLLYCLIENPDVYKQIQQDV-SLVPKA-----------------IEE 283
Cdd:cd20651   214 KEPPSSSFTDDQLVMICLDLFIAGSETTSNTLGFAFLYLLLNPEVQRKVQEEIdEVVGRDrlptlddrsklpyteavILE 293
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1005574924 284 VLRYRSPAQ-RIVRKVKKEIQIRGQTLQVDQIISGWIGSANRDSLHFKDADSFNIHR---------SRNPHLAFGHGIHF 353
Cdd:cd20651   294 VLRIFTLVPiGIPHRALKDTTLGGYRIPKDTTILASLYSVHMDPEYWGDPEEFRPERfldedgkllKDEWFLPFGAGKRR 373
                         170       180       190
                  ....*....|....*....|....*....|....*
gi 1005574924 354 CLGAPLARLEAKIVLTEIMKKyksFSFIDHNLPVP 388
Cdd:cd20651   374 CLGESLARNELFLFFTGLLQN---FTFSPPNGSLP 405
CYP57A1-like cd11060
cytochrome P450 family 57, subfamily A, polypeptide 1 and similar cytochrome P450s; This ...
88-384 4.48e-10

cytochrome P450 family 57, subfamily A, polypeptide 1 and similar cytochrome P450s; This family is composed of fungal cytochrome P450s including: Nectria haematococca cytochrome P450 57A1 (CYP57A1), also called pisatin demethylase, which detoxifies the phytoalexin pisatin; Penicillium aethiopicum P450 monooxygenase gsfF, also called griseofulvin synthesis protein F, which catalyzes the coupling of orcinol and phloroglucinol rings in griseophenone B to form desmethyl-dehydrogriseofulvin A during the biosynthesis of griseofulvin, a spirocyclic fungal natural product used to treat dermatophyte infections; and Penicillium aethiopicum P450 monooxygenase vrtE, also called viridicatumtoxin synthesis protein E, which catalyzes hydroxylation at C5 of the polyketide backbone during the biosynthesis of viridicatumtoxin, a tetracycline-like fungal meroterpenoid. The CYP57A1-like family belongs to the large cytochrome P450 (P450, CYP) superfamily of heme-containing proteins that catalyze a variety of oxidative reactions of a large number of structurally different endogenous and exogenous compounds in organisms from all major domains of life. CYPs bind their diverse ligands in a buried, hydrophobic active site, which is accessed through a substrate access channel formed by two flexible helices and their connecting loop.


Pssm-ID: 410683 [Multi-domain]  Cd Length: 425  Bit Score: 61.06  E-value: 4.48e-10
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1005574924  88 DPPKHTQIRSIVNRSFTPKSLKVWESRIQQITNDILIQLS----NRDNFDIVQEL-FYPLPVI-VIA--EMLGvsvnDMD 159
Cdd:cd11060    53 DEKRHAALRRKVASGYSMSSLLSLEPFVDECIDLLVDLLDekavSGKEVDLGKWLqYFAFDVIgEITfgKPFG----FLE 128
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1005574924 160 RFKKWSDIIVSSPNHDD--------PDYLKEFFHIRLQAENELEEFFEEIIQI----------NRGKSKKDSNDIISLLV 221
Cdd:cd11060   129 AGTDVDGYIASIDKLLPyfavvgqiPWLDRLLLKNPLGPKRKDKTGFGPLMRFaleavaerlaEDAESAKGRKDMLDSFL 208
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1005574924 222 --QSEADKNISGKEVVSFCKLLLVAGNETTTNLLGNLLYCLIENPDVYKQIQQDV----------SLVPKA--------- 280
Cdd:cd11060   209 eaGLKDPEKVTDREVVAEALSNILAGSDTTAIALRAILYYLLKNPRVYAKLRAEIdaavaegklsSPITFAeaqklpylq 288
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1005574924 281 --IEEVLRYRSPAQRIV-RKVKKE-IQIRGQTlqvdqIISGWIGSANRDSLHF------KDADSFN-----------IHR 339
Cdd:cd11060   289 avIKEALRLHPPVGLPLeRVVPPGgATICGRF-----IPGGTIVGVNPWVIHRdkevfgEDADVFRperwleadeeqRRM 363
                         330       340       350       360
                  ....*....|....*....|....*....|....*....|....*
gi 1005574924 340 SRNPHLAFGHGIHFCLGAPLARLEAKIVLTEIMKKYKsFSFIDHN 384
Cdd:cd11060   364 MDRADLTFGAGSRTCLGKNIALLELYKVIPELLRRFD-FELVDPE 407
CYP4 cd20628
cytochrome P450 family 4; Cytochrome P450 family 4 (CYP4) proteins catalyze the ...
233-376 1.22e-09

cytochrome P450 family 4; Cytochrome P450 family 4 (CYP4) proteins catalyze the omega-hydroxylation of the terminal carbon of fatty acids, including essential signaling molecules such as eicosanoids, prostaglandins and leukotrienes, and they are important for chemical defense. There are seven vertebrate family 4 subfamilies: CYP4A, CYP4B, CYP4F, CYP4T, CYP4V, CYP4X, and CYP4Z; three (CYP4X, CYP4A, CYP4Z) are specific to mammals. CYP4 enzymes metabolize fatty acids off various length, level of saturation, and branching. Specific subfamilies show preferences for the length of fatty acids; CYP4B, CYP4A and CYP4V, and CYP4F preferentially metabolize short (C7-C10), medium (C10-C16), and long to very long (C18-C26) fatty acid chains, respectively. CYP4 belongs to the large cytochrome P450 (P450, CYP) superfamily of heme-containing proteins that catalyze a variety of oxidative reactions of a large number of structurally different endogenous and exogenous compounds in organisms from all major domains of life. CYPs bind their diverse ligands in a buried, hydrophobic active site, which is accessed through a substrate access channel formed by two flexible helices and their connecting loop.


Pssm-ID: 410721 [Multi-domain]  Cd Length: 426  Bit Score: 59.84  E-value: 1.22e-09
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1005574924 233 EVVSFckllLVAGNETTTNLLGNLLYCLIENPDVYKQIQQDVSLVP-------------------KAIEEVLRYRSPAQR 293
Cdd:cd20628   233 EVDTF----MFAGHDTTASAISFTLYLLGLHPEVQEKVYEELDEIFgdddrrptledlnkmkyleRVIKETLRLYPSVPF 308
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1005574924 294 IVRKVKKEIQIRGQTLQVDQIISGWIGSANRDSLHFKDADSFN-------IHRSRNP--HLAFGHGIHFCLGAPLARLEA 364
Cdd:cd20628   309 IGRRLTEDIKLDGYTIPKGTTVVISIYALHRNPEYFPDPEKFDpdrflpeNSAKRHPyaYIPFSAGPRNCIGQKFAMLEM 388
                         170
                  ....*....|..
gi 1005574924 365 KIVLTEIMKKYK 376
Cdd:cd20628   389 KTLLAKILRNFR 400
CYP709 cd20641
cytochrome P450 family 709; Cytochrome P450 family 709 (CYP709) belongs to the plant CYP72 ...
233-398 1.43e-09

cytochrome P450 family 709; Cytochrome P450 family 709 (CYP709) belongs to the plant CYP72 clan, which is generally associated with the metabolism of a diversity of fairly hydrophobic compounds including fatty acids and isoprenoids, with the catabolism of hormones (brassinosteroids and gibberellin, GA) and with the biosynthesis of cytokinins. Arabidopsis thaliana CYP709B3 is involved in abscisic acid (ABA) and salt stress response. CYP709 belongs to the large cytochrome P450 (P450, CYP) superfamily of heme-containing proteins that catalyze a variety of oxidative reactions of a large number of structurally different endogenous and exogenous compounds in organisms from all major domains of life. CYPs bind their diverse ligands in a buried, hydrophobic active site, which is accessed through a substrate access channel formed by two flexible helices and their connecting loop.


Pssm-ID: 410734 [Multi-domain]  Cd Length: 431  Bit Score: 59.38  E-value: 1.43e-09
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1005574924 233 EVVSFCKLLLVAGNETTTNLLGNLLYCLIENPDVYKQIQQDV------------------SLVPKAIEEVLRYRSPAQRI 294
Cdd:cd20641   235 EIIDECKTFFFAGHETTSNLLTWTMFLLSLHPDWQEKLREEVfrecgkdkipdadtlsklKLMNMVLMETLRLYGPVINI 314
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1005574924 295 VRKVKKEIQIRGQTLQVDQIISGWIGSANRD-SLHFKDADSFNIHRSRN--------PH--LAFGHGIHFCLGAPLARLE 363
Cdd:cd20641   315 ARRASEDMKLGGLEIPKGTTIIIPIAKLHRDkEVWGSDADEFNPLRFANgvsraathPNalLSFSLGPRACIGQNFAMIE 394
                         170       180       190
                  ....*....|....*....|....*....|....*..
gi 1005574924 364 AKIVLTEIMKKYkSFSFIDH--NLPVPISSVSSVYGL 398
Cdd:cd20641   395 AKTVLAMILQRF-SFSLSPEyvHAPADHLTLQPQYGL 430
CYP503A1-like cd11041
cytochrome P450 family 503, subfamily A, polypeptide 1 and similar cytochrome P450s; This ...
206-388 4.43e-09

cytochrome P450 family 503, subfamily A, polypeptide 1 and similar cytochrome P450s; This family is composed of predominantly fungal cytochrome P450s (CYPs) with similarity to Fusarium fujikuroi Cytochrome P450 503A1 (CYP503A1, also called ent-kaurene oxidase or cytochrome P450-4), Aspergillus nidulans austinol synthesis protein I (ausI), Alternaria alternata tentoxin synthesis protein 1 (TES1), and Acanthamoeba polyphaga mimivirus cytochrome P450 51 (CYP51, also called P450-LIA1 or sterol 14-alpha demethylase). Ent-kaurene oxidase catalyzes three successive oxidations of the 4-methyl group of ent-kaurene to form kaurenoic acid, an intermediate in gibberellin biosynthesis. AusI and TES1 are cytochrome P450 monooxygenases that mediate the biosynthesis of the meroterpenoids, austinol and dehydroaustinol, and the phytotoxin tentoxin, respectively. P450-LIA1 catalyzes the 14-alpha demethylation of obtusifoliol and functions in steroid biosynthesis. This family belongs to the large cytochrome P450 (P450, CYP) superfamily of heme-containing proteins that catalyze a variety of oxidative reactions of a large number of structurally different endogenous and exogenous compounds in organisms from all major domains of life. CYPs bind their diverse ligands in a buried, hydrophobic active site, which is accessed through a substrate access channel formed by two flexible helices and their connecting loop.


Pssm-ID: 410667 [Multi-domain]  Cd Length: 441  Bit Score: 58.07  E-value: 4.43e-09
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1005574924 206 RGKSKKDSNDIISLLVQsEADKNISGKEVVSFCKLLLV--AGNETTTNLLGNLLYCLIENPDVYKQIQQDVSLV------ 277
Cdd:cd11041   199 KGPKEDKPNDLLQWLIE-AAKGEGERTPYDLADRQLALsfAAIHTTSMTLTHVLLDLAAHPEYIEPLREEIRSVlaehgg 277
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1005574924 278 ---------PK---AIEEVLRYRSPAQRIV-RKVKKEIQIR-GQTLQVDQIISGWIGSANRDSLHFKDADSFNIHRSRNP 343
Cdd:cd11041   278 wtkaalnklKKldsFMKESQRLNPLSLVSLrRKVLKDVTLSdGLTLPKGTRIAVPAHAIHRDPDIYPDPETFDGFRFYRL 357
                         170       180       190       200       210       220       230
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1005574924 344 ------------------HLAFGHGIHFCLGAPLARLEAKIVLTEIMKKY-----------KSFSFIDHNLPVP 388
Cdd:cd11041   358 reqpgqekkhqfvstspdFLGFGHGRHACPGRFFASNEIKLILAHLLLNYdfklpeggerpKNIWFGEFIMPDP 431
CYP_unk cd11083
unknown subfamily of cytochrome P450s; This subfamily is composed of uncharacterized ...
201-397 1.05e-08

unknown subfamily of cytochrome P450s; This subfamily is composed of uncharacterized cytochrome P450s. Cytochrome P450 (P450, CYP) is a large superfamily of heme-containing proteins that catalyze a variety of oxidative reactions of a large number of structurally different endogenous and exogenous compounds in organisms from all major domains of life. CYPs bind their diverse ligands in a buried, hydrophobic active site, which is accessed through a substrate access channel formed by two flexible helices and their connecting loop. Their monooxygenase activity relies on the reductive scission of molecular oxygen bound to the P450 heme iron, and the delivery of two electrons to the heme iron during the catalytic cycle.


Pssm-ID: 410704 [Multi-domain]  Cd Length: 421  Bit Score: 56.95  E-value: 1.05e-08
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1005574924 201 IIQINRGKSKKDS------NDIISLLVQSEADKN-ISGKEVVSFCKLLLVAGNETTTNLLGNLLYCLIENPDVYKQIQQD 273
Cdd:cd11083   183 IIAAARARLAANPalaeapETLLAMMLAEDDPDArLTDDEIYANVLTLLLAGEDTTANTLAWMLYYLASRPDVQARVREE 262
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1005574924 274 VSLV---------PKAIE----------EVLRYRSPAQRIVRKVKKEIQIRGQTLQVDQIISGWIGSANRDSLHFKDADS 334
Cdd:cd11083   263 VDAVlggarvpplLEALDrlpyleavarETLRLKPVAPLLFLEPNEDTVVGDIALPAGTPVFLLTRAAGLDAEHFPDPEE 342
                         170       180       190       200       210       220       230
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1005574924 335 FN------------IHRSRNpHLAFGHGIHFCLGAPLARLEAKIVLTEIMKKYksfsfiDHNLPVPISSVSSVYG 397
Cdd:cd11083   343 FDperwldgaraaePHDPSS-LLPFGAGPRLCPGRSLALMEMKLVFAMLCRNF------DIELPEPAPAVGEEFA 410
PLN02290 PLN02290
cytokinin trans-hydroxylase
201-399 1.62e-08

cytokinin trans-hydroxylase


Pssm-ID: 215164 [Multi-domain]  Cd Length: 516  Bit Score: 56.36  E-value: 1.62e-08
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1005574924 201 IIQINR-----GKSKKDSNDIISLLVqSEADKNISGKE------VVSFCKLLLVAGNETTTNLLGNLLYCLIENPDVYKQ 269
Cdd:PLN02290  274 IIQSRRdcveiGRSSSYGDDLLGMLL-NEMEKKRSNGFnlnlqlIMDECKTFFFAGHETTALLLTWTLMLLASNPTWQDK 352
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1005574924 270 IQQDV-----------------SLVPKAIEEVLRYRSPAQRIVRKVKKEIQIRGqtLQVDQIISGWI---GSANRDSLHF 329
Cdd:PLN02290  353 VRAEVaevcggetpsvdhlsklTLLNMVINESLRLYPPATLLPRMAFEDIKLGD--LHIPKGLSIWIpvlAIHHSEELWG 430
                         170       180       190       200       210       220       230
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1005574924 330 KDADSFNIHR--SRNP-----HLAFGHGIHFCLGAPLARLEAKIVLTEIMKKYkSFSFIDH--NLPVPISSVSSVYGLK 399
Cdd:PLN02290  431 KDANEFNPDRfaGRPFapgrhFIPFAAGPRNCIGQAFAMMEAKIILAMLISKF-SFTISDNyrHAPVVVLTIKPKYGVQ 508
CYP17A1-like cd11027
cytochrome P450 family 17, subfamily A, polypeptide 1, and similar cytochrome P450s; This ...
241-379 1.90e-08

cytochrome P450 family 17, subfamily A, polypeptide 1, and similar cytochrome P450s; This subfamily contains cytochrome P450 17A1 (CYP17A1 or Cyp17a1), cytochrome P450 21 (CYP21 or Cyp21) and similar proteins. CYP17A1, also called cytochrome P450c17, steroid 17-alpha-hydroxylase (EC 1.14.14.19)/17,20 lyase (EC 1.14.14.32), or 17-alpha-hydroxyprogesterone aldolase, catalyzes the conversion of pregnenolone and progesterone to their 17-alpha-hydroxylated products and subsequently to dehydroepiandrosterone (DHEA) and androstenedione; it catalyzes both the 17-alpha-hydroxylation and the 17,20-lyase reaction. This subfamily also contains CYP21, also called steroid 21-hydroxylase (EC 1.14.14.16) or cytochrome P-450c21 or CYP21A2, catalyzes the 21-hydroxylation of steroids and is required for the adrenal synthesis of mineralocorticoids and glucocorticoids. The CYP17A1-like subfamily belongs to the large cytochrome P450 (P450, CYP) superfamily of heme-containing proteins that catalyze a variety of oxidative reactions of a large number of structurally different endogenous and exogenous compounds in organisms from all major domains of life. CYPs bind their diverse ligands in a buried, hydrophobic active site, which is accessed through a substrate access channel formed by two flexible helices and their connecting loop.


Pssm-ID: 410653 [Multi-domain]  Cd Length: 428  Bit Score: 56.06  E-value: 1.90e-08
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1005574924 241 LLVAGNETTTNLLGNLLYCLIENPDVYKQIQQ---------------DVSLVP--KA-IEEVLRYRSPA-QRIVRKVKKE 301
Cdd:cd11027   237 IFGAGTETTATTLRWAIAYLVNYPEVQAKLHAelddvigrdrlptlsDRKRLPylEAtIAEVLRLSSVVpLALPHKTTCD 316
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1005574924 302 IQIRGQTLQVDQ--IISGWigSANRDSLHFKDADSFNIHR-----------SRNpHLAFGHGIHFCLGAPLARLEAKIVL 368
Cdd:cd11027   317 TTLRGYTIPKGTtvLVNLW--ALHHDPKEWDDPDEFRPERfldengklvpkPES-FLPFSAGRRVCLGESLAKAELFLFL 393
                         170
                  ....*....|.
gi 1005574924 369 TEIMKKYKsFS 379
Cdd:cd11027   394 ARLLQKFR-FS 403
Cyp2F cd20669
cytochrome P450 family 2, subfamily F; Cytochrome P450 family 2, subfamily F (CYP2F) members ...
241-402 1.97e-08

cytochrome P450 family 2, subfamily F; Cytochrome P450 family 2, subfamily F (CYP2F) members are selectively expressed in lung tissues. They are responsible for the bioactivation of several pneumotoxic and carcinogenic chemicals such as benzene, styrene, naphthalene, and 1,1-dichloroethylene. CYP2F1 and CYP2F3 selectively catalyzes the 3-methyl dehydrogenation of 3-methylindole, forming toxic reactive intermediates that can form adducts with proteins and DNA. The CYP2F subfamily belongs to the large cytochrome P450 (P450, CYP) superfamily of heme-containing proteins that catalyze a variety of oxidative reactions of a large number of structurally different endogenous and exogenous compounds in organisms from all major domains of life. CYPs bind their diverse ligands in a buried, hydrophobic active site, which is accessed through a substrate access channel formed by two flexible helices and their connecting loop.


Pssm-ID: 410762 [Multi-domain]  Cd Length: 425  Bit Score: 55.92  E-value: 1.97e-08
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1005574924 241 LLVAGNETTTNLLGNLLYCLIENPDVYKQIQQDVSLVpkaieeVLRYRSPA-----------------QRIV-------- 295
Cdd:cd20669   234 LLFGGTETVSTTLRYGFLILMKYPKVAARVQEEIDRV------VGRNRLPTledrarmpytdaviheiQRFAdiipmslp 307
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1005574924 296 RKVKKEIQIRGQTLQVDQIISGWIGSANRDSLHFKDADSFNIH---------RSRNPHLAFGHGIHFCLGAPLARLEAKI 366
Cdd:cd20669   308 HAVTRDTNFRGFLIPKGTDVIPLLNSVHYDPTQFKDPQEFNPEhflddngsfKKNDAFMPFSAGKRICLGESLARMELFL 387
                         170       180       190
                  ....*....|....*....|....*....|....*.
gi 1005574924 367 VLTEIMkkyKSFSFIDHNLPVPISSVSSVYGLKSLP 402
Cdd:cd20669   388 YLTAIL---QNFSLQPLGAPEDIDLTPLSSGLGNVP 420
CYP21 cd20674
cytochrome P450 21, also called steroid 21-hydroxylase; Cytochrome P450 21 (CYP21 or Cyp21), ...
241-404 6.76e-08

cytochrome P450 21, also called steroid 21-hydroxylase; Cytochrome P450 21 (CYP21 or Cyp21), also called steroid 21-hydroxylase (EC 1.14.14.16) or cytochrome P-450c21 or CYP21A2 (in humans), catalyzes the 21-hydroxylation of steroids such as progesterone and 17-alpha-hydroxyprogesterone (17-alpha-OH-progesterone) to form 11-deoxycorticosterone and 11-deoxycortisol, respectively. It is required for the adrenal synthesis of mineralocorticoids and glucocorticoids. Deficiency of this CYP is involved in ~95% of cases of human congenital adrenal hyperplasia, a disorder of adrenal steroidogenesis. There are two CYP21 genes in the human genome, CYP21A1 (a pseudogene) and CYP21A2 (the functional gene). Deficiencies in steroid 21-hydroxylase activity lead to a type of congenital adrenal hyperplasia, which has three clinical forms: a severe form with concurrent defects in both cortisol and aldosterone biosynthesis; a form with adequate aldosterone biosynthesis; and a mild, non-classic form that can be asymptomatic or associated with signs of postpubertal androgen excess without cortisol deficiency. CYP21A2 is also the major autoantigen in autoimmune Addison disease. Cyp21 belongs to the large cytochrome P450 (P450, CYP) superfamily of heme-containing proteins that catalyze a variety of oxidative reactions of a large number of structurally different endogenous and exogenous compounds in organisms from all major domains of life. CYPs bind their diverse ligands in a buried, hydrophobic active site, which is accessed through a substrate access channel formed by two flexible helices and their connecting loop.


Pssm-ID: 410767 [Multi-domain]  Cd Length: 424  Bit Score: 54.34  E-value: 6.76e-08
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1005574924 241 LLVAGNETTTNLLGNLLYCLIENPDVYKQIQQDVSLV--PKA----------------IEEVLRYRSPAQRIV-RKVKKE 301
Cdd:cd20674   234 LFIGGTETTASTLSWAVAFLLHHPEIQDRLQEELDRVlgPGAspsykdrarlpllnatIAEVLRLRPVVPLALpHRTTRD 313
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1005574924 302 IQIRGQTLQVDQIISGWIGSANRDSLHFKDADSFNIHRSRNPH------LAFGHGIHFCLGAPLARLEAKIVLTEIMKKY 375
Cdd:cd20674   314 SSIAGYDIPKGTVVIPNLQGAHLDETVWEQPHEFRPERFLEPGaanralLPFGCGARVCLGEPLARLELFVFLARLLQAF 393
                         170       180
                  ....*....|....*....|....*....
gi 1005574924 376 KSFSFIDHNLPvpisSVSSVYGLkSLPVK 404
Cdd:cd20674   394 TLLPPSDGALP----SLQPVAGI-NLKVQ 417
PLN02196 PLN02196
abscisic acid 8'-hydroxylase
56-376 9.71e-08

abscisic acid 8'-hydroxylase


Pssm-ID: 177847 [Multi-domain]  Cd Length: 463  Bit Score: 53.79  E-value: 9.71e-08
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1005574924  56 EDVKRVLEDK-EFFSNIMPEKKKSPF-PQSILGMDPPKHTQIRSIVNRSFTPKSLKVWESRIQQITNDILIQLSNRDnFD 133
Cdd:PLN02196   88 EAAKFVLVTKsHLFKPTFPASKERMLgKQAIFFHQGDYHAKLRKLVLRAFMPDAIRNMVPDIESIAQESLNSWEGTQ-IN 166
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1005574924 134 IVQEL-FYPLPVIVIAEMLGVSVNDMDRFKKWSDIIVSSPNHDDPDYLKEFFHIRLQAENELEEFFEEIIQINRgKSKKD 212
Cdd:PLN02196  167 TYQEMkTYTFNVALLSIFGKDEVLYREDLKRCYYILEKGYNSMPINLPGTLFHKSMKARKELAQILAKILSKRR-QNGSS 245
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1005574924 213 SNDIISLLVQSEAdkNISGKEVVSFCKLLLVAGNETTTNLLGNLLYCLIENPDVYKQIQQD------------------- 273
Cdd:PLN02196  246 HNDLLGSFMGDKE--GLTDEQIADNIIGVIFAARDTTASVLTWILKYLAENPSVLEAVTEEqmairkdkeegesltwedt 323
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1005574924 274 --VSLVPKAIEEVLRYRSPAQRIVRKVKKEIQIRGQTlqvdqIISGW-IGSANRDSLH----FKDADSFNIHR-----SR 341
Cdd:PLN02196  324 kkMPLTSRVIQETLRVASILSFTFREAVEDVEYEGYL-----IPKGWkVLPLFRNIHHsadiFSDPGKFDPSRfevapKP 398
                         330       340       350
                  ....*....|....*....|....*....|....*
gi 1005574924 342 NPHLAFGHGIHFCLGAPLARLEAKIVLTEIMKKYK 376
Cdd:PLN02196  399 NTFMPFGNGTHSCPGNELAKLEISVLIHHLTTKYR 433
CYP4B_4F-like cd20659
cytochrome P450 family 4, subfamilies B and F, and similar cytochrome P450s; This group is ...
233-388 1.56e-07

cytochrome P450 family 4, subfamilies B and F, and similar cytochrome P450s; This group is composed of family 4 cytochrome P450s from vertebrate subfamilies A (CYP4A), B (CYP4B), F (CYP4F), T (CYP4T), X (CYP4X), and Z (CYP4Z). Also included are similar proteins from lancelets, tunicates, hemichordates, echinoderms, mollusks, annelid worms, sponges, and choanoflagellates, among others. The CYP4A, CYP4X, and CYP4Z subfamilies are specific to mammals, CYP4T is present in fish, while CYP4B and CYP4F are conserved among vertebrates. CYP4Bs specialize in omega-hydroxylation of short chain fatty acids and also participates in the metabolism of exogenous compounds that are protoxic including valproic acid (C8), 3-methylindole (C9), 4-ipomeanol, 3-methoxy-4-aminoazobenzene, and several aromatic amines. CYP4F enzymes are known for known for omega-hydroxylation of very long fatty acids (VLFA; C18-C26), leukotrienes, prostaglandins, and vitamins with long alkyl side chains. The CYP4B_4F-like group belongs to the large cytochrome P450 (P450, CYP) superfamily of heme-containing proteins that catalyze a variety of oxidative reactions of a large number of structurally different endogenous and exogenous compounds in organisms from all major domains of life. CYPs bind their diverse ligands in a buried, hydrophobic active site, which is accessed through a substrate access channel formed by two flexible helices and their connecting loop.


Pssm-ID: 410752 [Multi-domain]  Cd Length: 423  Bit Score: 52.94  E-value: 1.56e-07
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1005574924 233 EVVSFckllLVAGNETTTNLLGNLLYCLIENPDVYKQIQQDVS--LVPKA----------------IEEVLRYRSPAQRI 294
Cdd:cd20659   231 EVDTF----LFAGHDTTASGISWTLYSLAKHPEHQQKCREEVDevLGDRDdiewddlsklpyltmcIKESLRLYPPVPFI 306
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1005574924 295 VRKVKKEIQIRGQTLQVDQIISGWIGSANRDSLHFKDADSFNIHR-------SRNPH--LAFGHGIHFCLGAPLARLEAK 365
Cdd:cd20659   307 ARTLTKPITIDGVTLPAGTLIAINIYALHHNPTVWEDPEEFDPERflpenikKRDPFafIPFSAGPRNCIGQNFAMNEMK 386
                         170       180
                  ....*....|....*....|...
gi 1005574924 366 IVLTEIMKKYKsFSfIDHNLPVP 388
Cdd:cd20659   387 VVLARILRRFE-LS-VDPNHPVE 407
CYP52 cd11063
cytochrome P450 family 52; Cytochrome P450 52 (CYP52), also called P450ALK, monooxygenases ...
208-378 5.30e-07

cytochrome P450 family 52; Cytochrome P450 52 (CYP52), also called P450ALK, monooxygenases catalyze the first hydroxylation step in the assimilation of alkanes and fatty acids by filamentous fungi. The number of CYP52 proteins depend on the fungal species: for example, Candida tropicalis has seven, Candida maltose has eight, and Yarrowia lipolytica has twelve. The CYP52 family belongs to the large cytochrome P450 (P450, CYP) superfamily of heme-containing proteins that catalyze a variety of oxidative reactions of a large number of structurally different endogenous and exogenous compounds in organisms from all major domains of life. CYPs bind their diverse ligands in a buried, hydrophobic active site, which is accessed through a substrate access channel formed by two flexible helices and their connecting loop.


Pssm-ID: 410686 [Multi-domain]  Cd Length: 419  Bit Score: 51.40  E-value: 5.30e-07
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1005574924 208 KSKKDSNDIISLLVQSEADKNISGKEVVSfcklLLVAGNETTTNLLGNLLYCLIENPDVYKQIQQDV-SLVPKA------ 280
Cdd:cd11063   195 EESSDRYVFLDELAKETRDPKELRDQLLN----ILLAGRDTTASLLSFLFYELARHPEVWAKLREEVlSLFGPEptptye 270
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1005574924 281 -----------IEEVLRYRSPAQRIVRkvkkeIQIRGQTLQV--------------DQIISGWIGSANRD-SLHFKDADS 334
Cdd:cd11063   271 dlknmkylravINETLRLYPPVPLNSR-----VAVRDTTLPRgggpdgkspifvpkGTRVLYSVYAMHRRkDIWGPDAEE 345
                         170       180       190       200       210
                  ....*....|....*....|....*....|....*....|....*....|
gi 1005574924 335 FNIHR----SRNP--HLAFGHGIHFCLGAPLARLEAKIVLTEIMKKYKSF 378
Cdd:cd11063   346 FRPERwedlKRPGweYLPFNGGPRICLGQQFALTEASYVLVRLLQTFDRI 395
CYP24A1 cd20645
cytochrome P450 family 24, subfamily A, polypeptide 1, also called vitamin D(3) 24-hydroxylase; ...
209-376 9.60e-07

cytochrome P450 family 24, subfamily A, polypeptide 1, also called vitamin D(3) 24-hydroxylase; Cytochrome P450 24A1 (CYP24A1, EC 1.14.15.16) is also called 1,25-dihydroxyvitamin D(3) 24-hydroxylase (24-OHase), vitamin D(3) 24-hydroxylase, or cytochrome P450-CC24. It catalyzes the NADPH-dependent 24-hydroxylation of calcidiol (25-hydroxyvitamin D(3)) and calcitriol (1-alpha,25-dihydroxyvitamin D(3) or 1,25(OH)2D3). CYP24A1 regulates vitamin D activity through its hydroxylation of calcitriol, the physiologically active vitamin D hormone, which controls gene-expression and signal-transduction processes associated with calcium homeostasis, cellular growth, and the maintenance of heart, muscle, immune, and skin function. CYP24A1 belongs to the large cytochrome P450 (P450, CYP) superfamily of heme-containing proteins that catalyze a variety of oxidative reactions of a large number of structurally different endogenous and exogenous compounds in organisms from all major domains of life. CYPs bind their diverse ligands in a buried, hydrophobic active site, which is accessed through a substrate access channel formed by two flexible helices and their connecting loop.


Pssm-ID: 410738 [Multi-domain]  Cd Length: 419  Bit Score: 50.58  E-value: 9.60e-07
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1005574924 209 SKKDSNDIISLLVQseaDKNISGKEVVSFCKLLLVAGNETTTNLLGNLLYCLIENPDVYKQIQQDVSLV------PKA-- 280
Cdd:cd20645   205 SQGPANDFLCDIYH---DNELSKKELYAAITELQIGGVETTANSLLWILYNLSRNPQAQQKLLQEIQSVlpanqtPRAed 281
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1005574924 281 ----------IEEVLRYRSPAQRIVRKVKKEIQI------RGQTLQVDQIISGWIGSANRDSLHFKDADSFNIHRSRNP- 343
Cdd:cd20645   282 lknmpylkacLKESMRLTPSVPFTSRTLDKDTVLgdyllpKGTVLMINSQALGSSEEYFEDGRQFKPERWLQEKHSINPf 361
                         170       180       190
                  ....*....|....*....|....*....|....
gi 1005574924 344 -HLAFGHGIHFCLGAPLARLEAKIVLTEIMKKYK 376
Cdd:cd20645   362 aHVPFGIGKRMCIGRRLAELQLQLALCWIIQKYQ 395
PLN02738 PLN02738
carotene beta-ring hydroxylase
216-399 1.87e-06

carotene beta-ring hydroxylase


Pssm-ID: 215393 [Multi-domain]  Cd Length: 633  Bit Score: 49.91  E-value: 1.87e-06
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1005574924 216 IISLLVQSEADknISGKEVVSFCKLLLVAGNETTTNLLGNLLYCLIENPDVYKQIQQDVSLV-----------------P 278
Cdd:PLN02738  376 ILHFLLASGDD--VSSKQLRDDLMTMLIAGHETSAAVLTWTFYLLSKEPSVVAKLQEEVDSVlgdrfptiedmkklkytT 453
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1005574924 279 KAIEEVLR-YRSPAQRIVRKVKKEI----QI-RGQtlqvDQIISGWigSANRDSLHFKDADSFNIHR----SRNP----- 343
Cdd:PLN02738  454 RVINESLRlYPQPPVLIRRSLENDMlggyPIkRGE----DIFISVW--NLHRSPKHWDDAEKFNPERwpldGPNPnetnq 527
                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1005574924 344 ---HLAFGHGIHFCLGAPLARLEAKIVLTEIMKKYkSFSFIDHNLPVPISSVSSVY---GLK 399
Cdd:PLN02738  528 nfsYLPFGGGPRKCVGDMFASFENVVATAMLVRRF-DFQLAPGAPPVKMTTGATIHtteGLK 588
CYP39A1 cd20635
cytochrome P450 family 39, subfamily A, polypeptide 1; Cytochrome P450 39A1 (CYP39A1) is also ...
261-388 2.74e-06

cytochrome P450 family 39, subfamily A, polypeptide 1; Cytochrome P450 39A1 (CYP39A1) is also called 24-hydroxycholesterol 7-alpha-hydroxylase (EC 1.14.14.26) or oxysterol 7-alpha-hydroxylase. It is involved in the metabolism of bile acids and has a preference for 24-hydroxycholesterol, converting it into the 7-alpha-hydroxylated product. It may play a role in the alternative bile acid synthesis pathway in the liver. CYP39A1 belongs to the large cytochrome P450 (P450, CYP) superfamily of heme-containing proteins that catalyze a variety of oxidative reactions of a large number of structurally different endogenous and exogenous compounds in organisms from all major domains of life. CYPs bind their diverse ligands in a buried, hydrophobic active site, which is accessed through a substrate access channel formed by two flexible helices and their connecting loop.


Pssm-ID: 410728  Cd Length: 410  Bit Score: 49.23  E-value: 2.74e-06
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1005574924 261 IENPDVYKQIQQDVSLVPK----------------------AIEEVLRYRSPAQrIVRKVKKEIQIRGQTLQVDQIISG- 317
Cdd:cd20635   238 LSHPSVYKKVMEEISSVLGkagkdkikiseddlkkmpyikrCVLEAIRLRSPGA-ITRKVVKPIKIKNYTIPAGDMLMLs 316
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1005574924 318 --WigsANRDSLHFKDADSFNIHR------SRNPHL----AFGHGIHFCLGAPLARLEAKIVLTEIMKKYKsFSFIDHnL 385
Cdd:cd20635   317 pyW---AHRNPKYFPDPELFKPERwkkadlEKNVFLegfvAFGGGRYQCPGRWFALMEIQMFVAMFLYKYD-FTLLDP-V 391

                  ...
gi 1005574924 386 PVP 388
Cdd:cd20635   392 PKP 394
CYP17A1 cd20673
cytochrome P450 family 17, subfamily A, polypeptide 1; Cytochrome P450 17A1 (CYP17A1 or ...
244-375 3.06e-06

cytochrome P450 family 17, subfamily A, polypeptide 1; Cytochrome P450 17A1 (CYP17A1 or Cyp17a1), also called cytochrome P450c17, steroid 17-alpha-hydroxylase (EC 1.14.14.19)/17,20 lyase (EC 1.14.14.32), or 17-alpha-hydroxyprogesterone aldolase, catalyzes the conversion of pregnenolone and progesterone to their 17-alpha-hydroxylated products and subsequently to dehydroepiandrosterone (DHEA) and androstenedione. It is a dual enzyme that catalyzes both the 17-alpha-hydroxylation and the 17,20-lyase reactions. Severe mutations on the enzyme cause combined 17-hydroxylase/17,20-lyase deficiency (17OHD); patients with 17OHD synthesize 11-deoxycorticosterone (DOC) which causes hypertension and hypokalemia. Loss of 17,20-lyase activity precludes sex steroid synthesis and leads to sexual infantilism. Included in this group is a second 17A P450 from teleost fish, CYP17A2, that is more efficient in pregnenolone 17-alpha-hydroxylation than CYP17A1, but does not catalyze the lyase reaction. CYP17A1 belongs to the large cytochrome P450 (P450, CYP) superfamily of heme-containing proteins that catalyze a variety of oxidative reactions of a large number of structurally different endogenous and exogenous compounds in organisms from all major domains of life. CYPs bind their diverse ligands in a buried, hydrophobic active site, which is accessed through a substrate access channel formed by two flexible helices and their connecting loop.


Pssm-ID: 410766 [Multi-domain]  Cd Length: 432  Bit Score: 49.24  E-value: 3.06e-06
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1005574924 244 AGNETTTNLLGNLLYCLIENPDVYKQIQQD------VSLVPK------------AIEEVLRYR--SPAQrIVRKVKKEIQ 303
Cdd:cd20673   243 AGVETTTTVLKWIIAFLLHNPEVQKKIQEEidqnigFSRTPTlsdrnhlplleaTIREVLRIRpvAPLL-IPHVALQDSS 321
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1005574924 304 IRGQTLQVDQ--IISGWigSANRDSLHFKDADSFNIHRSRNP-----------HLAFGHGIHFCLGAPLARLEAKIVLTE 370
Cdd:cd20673   322 IGEFTIPKGTrvVINLW--ALHHDEKEWDQPDQFMPERFLDPtgsqlispslsYLPFGAGPRVCLGEALARQELFLFMAW 399

                  ....*
gi 1005574924 371 IMKKY 375
Cdd:cd20673   400 LLQRF 404
CYP2A cd20668
cytochrome P450 family 2, subfamily A; Cytochrome P450 family 2, subfamily A (CYP2A) includes ...
241-376 3.70e-06

cytochrome P450 family 2, subfamily A; Cytochrome P450 family 2, subfamily A (CYP2A) includes CYP2A1, 2A2, and 2A3 in rats; CYP2A4, 2A5, 2A12, 2A20p, 2A21p, 2A22, and 2A23p in mice; CYP2A6, 2A7, 2A13, 2A18P in humans; CYP2A8, 2A9, 2A14, 2A15, 2A16, and 2A17 in hamsters; CYP2A10 and 2A11 in rabbits; and CYP2A19 in pigs. CYP2A enzymes metabolize numerous xenobiotic compounds, including coumarin, aflatoxin B1, nicotine, cotinine, 1,3-butadiene, and acetaminophen, among others, as well as endogenous compounds, including testosterone, progesterone, and other steroid hormones. Human CYP2A6 is responsible for the systemic clearance of nicotine, while CYP2A13 activates the nicotine-derived procarcinogen 4-(methylnitrosamino)-1-(3-pyridyl)-1-butanone (NNK) into DNA-altering compounds that cause lung cancer. The CYP2A subfamily belongs to the large cytochrome P450 (P450, CYP) superfamily of heme-containing proteins that catalyze a variety of oxidative reactions of a large number of structurally different endogenous and exogenous compounds in organisms from all major domains of life. CYPs bind their diverse ligands in a buried, hydrophobic active site, which is accessed through a substrate access channel formed by two flexible helices and their connecting loop.


Pssm-ID: 410761 [Multi-domain]  Cd Length: 425  Bit Score: 48.64  E-value: 3.70e-06
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1005574924 241 LLVAGNET--TTNLLGNLLycLIENPDVYKQIQQDVSLV------PK------------AIEEVLRYRSPAQR-IVRKVK 299
Cdd:cd20668   234 LFFAGTETvsTTLRYGFLL--LMKHPEVEAKVHEEIDRVigrnrqPKfedrakmpyteaVIHEIQRFGDVIPMgLARRVT 311
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1005574924 300 KEIQIRGQTLQVDQIISGWIGSANRDSLHFKDADSFNIH---------RSRNPHLAFGHGIHFCLGAPLARLEAKIVLTE 370
Cdd:cd20668   312 KDTKFRDFFLPKGTEVFPMLGSVLKDPKFFSNPKDFNPQhflddkgqfKKSDAFVPFSIGKRYCFGEGLARMELFLFFTT 391

                  ....*.
gi 1005574924 371 IMKKYK 376
Cdd:cd20668   392 IMQNFR 397
CYP2G cd20670
cytochrome P450 family 2, subfamily G; CYP2G1 is uniquely expressed in the olfactory mucosa of ...
216-402 4.07e-06

cytochrome P450 family 2, subfamily G; CYP2G1 is uniquely expressed in the olfactory mucosa of rats and rabbits and may have important functions for the olfactory chemosensory system. It is involved in the metabolism of sex steroids and xenobiotic compounds. In cynomolgus monkeys, CYP2G2 is a functional drug-metabolizing enzyme in nasal mucosa. In humans, two different CYP2G genes, CYP2GP1 and CYP2GP2, are pseudogenes because of loss-of-function deletions/mutations. The CYP2G subfamily belongs to the large cytochrome P450 (P450, CYP) superfamily of heme-containing proteins that catalyze a variety of oxidative reactions of a large number of structurally different endogenous and exogenous compounds in organisms from all major domains of life. CYPs bind their diverse ligands in a buried, hydrophobic active site, which is accessed through a substrate access channel formed by two flexible helices and their connecting loop.


Pssm-ID: 410763 [Multi-domain]  Cd Length: 425  Bit Score: 48.77  E-value: 4.07e-06
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1005574924 216 IISLLVQSEADKN-----ISGKEVVSFCKLLLVAGNETTTNLLGNLLYCLIENPDVYKQIQQDVSLV--PKAIEEVL-RY 287
Cdd:cd20670   204 IDCFLIKMHQDKNnphteFNLKNLVLTTLNLFFAGTETVSSTLRYGFLLLMKYPEVEAKIHEEINQVigPHRLPSVDdRV 283
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1005574924 288 RSP--------AQRIV--------RKVKKEIQIRGQTLQVDQIISGWIGSANRDSLHFKDADSFNIH---------RSRN 342
Cdd:cd20670   284 KMPytdaviheIQRLTdivplgvpHNVIRDTQFRGYLLPKGTDVFPLLGSVLKDPKYFRYPEAFYPQhfldeqgrfKKNE 363
                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|
gi 1005574924 343 PHLAFGHGIHFCLGAPLARLEAKIVLTEIMKKYKSFSFIDhnlPVPISSVSSVYGLKSLP 402
Cdd:cd20670   364 AFVPFSSGKRVCLGEAMARMELFLYFTSILQNFSLRSLVP---PADIDITPKISGFGNIP 420
CYP27A1 cd20646
cytochrome P450 family 27, subfamily A, polypeptide 1, also called vitamin D(3) 25-hydroxylase; ...
228-376 4.32e-06

cytochrome P450 family 27, subfamily A, polypeptide 1, also called vitamin D(3) 25-hydroxylase; Cytochrome P450 27A1 (CYP27A1, EC 1.14.15.15) is also called CYP27, cholestanetriol 26-monooxygenase, sterol 26-hydroxylase, 5-beta-cholestane-3-alpha,7-alpha,12-alpha-triol 27-hydroxylase, cytochrome P-450C27/25, sterol 27-hydroxylase, or vitamin D(3) 25-hydroxylase. It catalyzes the first step in the oxidation of the side chain of sterol intermediates, the 27-hydroxylation of 5-beta-cholestane-3-alpha,7-alpha,12-alpha-triol, and the first three sterol side chain oxidations in bile acid biosynthesis via the neutral (classic) pathway. It also hydroxylates vitamin D3 at the 25-position, as well as cholesterol at positions 24 and 25. CYP27A1 belongs to the large cytochrome P450 (P450, CYP) superfamily of heme-containing proteins that catalyze a variety of oxidative reactions of a large number of structurally different endogenous and exogenous compounds in organisms from all major domains of life. CYPs bind their diverse ligands in a buried, hydrophobic active site, which is accessed through a substrate access channel formed by two flexible helices and their connecting loop.


Pssm-ID: 410739 [Multi-domain]  Cd Length: 430  Bit Score: 48.50  E-value: 4.32e-06
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1005574924 228 NISGKEVV-SFCKLLLvAGNETTTNLLGNLLYCLIENPDVYKQIQQDV-SLVP----------------KA-IEEVLR-Y 287
Cdd:cd20646   228 KLSPKEVYgSLTELLL-AGVDTTSNTLSWALYHLARDPEIQERLYQEViSVCPgdriptaediakmpllKAvIKETLRlY 306
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1005574924 288 rsPA----QRIVrkVKKEIQIRGQTLQVDQIISGWIGSANRDSLHFKDADSFNIHR----SRNPH-----LAFGHGIHFC 354
Cdd:cd20646   307 --PVvpgnARVI--VEKEVVVGDYLFPKNTLFHLCHYAVSHDETNFPEPERFKPERwlrdGGLKHhpfgsIPFGYGVRAC 382
                         170       180
                  ....*....|....*....|..
gi 1005574924 355 LGAPLARLEAKIVLTEIMKKYK 376
Cdd:cd20646   383 VGRRIAELEMYLALSRLIKRFE 404
CYP313-like cd11057
cytochrome P450 family 313 and similar cytochrome P450s; This subfamily is composed of insect ...
224-376 4.94e-06

cytochrome P450 family 313 and similar cytochrome P450s; This subfamily is composed of insect cytochrome P450s from families 313 (CYP313) and 318 (CYP318), and similar proteins. These proteins may be involved in the metabolism of insect hormones and in the breakdown of synthetic insecticides. Their specific function is yet unknown. They belong to the large cytochrome P450 (P450, CYP) superfamily of heme-containing proteins that catalyze a variety of oxidative reactions of a large number of structurally different endogenous and exogenous compounds in organisms from all major domains of life. CYPs bind their diverse ligands in a buried, hydrophobic active site, which is accessed through a substrate access channel formed by two flexible helices and their connecting loop.


Pssm-ID: 410680 [Multi-domain]  Cd Length: 427  Bit Score: 48.37  E-value: 4.94e-06
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1005574924 224 EADKNISGKEVVSFCKLLLVAGNETTTNLLGNLLYCLIENPD----VYKQIQQdvsLVPKA------------------I 281
Cdd:cd11057   218 RNGEEFTDEEIMDEIDTMIFAGNDTSATTVAYTLLLLAMHPEvqekVYEEIME---VFPDDgqfityedlqqlvylemvL 294
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1005574924 282 EEVLRYRSPAQRIVRKVKKEIQI-------RGQTLQVDqiisgwIGSANRDSLHF-KDADSFNIHR-------SRNPH-- 344
Cdd:cd11057   295 KETMRLFPVGPLVGRETTADIQLsngvvipKGTTIVID------IFNMHRRKDIWgPDADQFDPDNflpersaQRHPYaf 368
                         170       180       190
                  ....*....|....*....|....*....|..
gi 1005574924 345 LAFGHGIHFCLGAPLARLEAKIVLTEIMKKYK 376
Cdd:cd11057   369 IPFSAGPRNCIGWRYAMISMKIMLAKILRNYR 400
CYP170A1-like cd11049
cytochrome P450 family 170, subfamily A, polypeptide 1-like actinobacterial cytochrome P450s; ...
212-376 5.46e-06

cytochrome P450 family 170, subfamily A, polypeptide 1-like actinobacterial cytochrome P450s; This subfamily is composed of Streptomyces coelicolor cytochrome P450 170A1 (CYP170A1), Streptomyces avermitilis pentalenene oxygenase, and similar actinobacterial cytochrome P450s. CYP170A1, also called epi-isozizaene 5-monooxygenase (EC 1.14.13.106)/(E)-beta-farnesene synthase (EC 4.2.3.47), catalyzes the two-step allylic oxidation of epi-isozizaene to albaflavenone, which is a sesquiterpenoid antibiotic. Pentalenene oxygenase (EC 1.14.15.32) catalyzes the conversion of pentalenene to pentalen-13-al by stepwise oxidation via pentalen-13-ol, a precursor of the neopentalenolactone antibiotic. The CYP170A1-like subfamily belongs to the large cytochrome P450 (P450, CYP) superfamily of heme-containing proteins that catalyze a variety of oxidative reactions of a large number of structurally different endogenous and exogenous compounds in organisms from all major domains of life. CYPs bind their diverse ligands in a buried, hydrophobic active site, which is accessed through a substrate access channel formed by two flexible helices and their connecting loop.


Pssm-ID: 410673 [Multi-domain]  Cd Length: 415  Bit Score: 48.41  E-value: 5.46e-06
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1005574924 212 DSNDIISLLVQSEADKN--ISGKEVVSFCKLLLVAGNETTTNLLGNLLYCLIENPDVYKQIQQDV--------------- 274
Cdd:cd11049   197 DRDDLLSLLLAARDEEGrpLSDEELRDQVITLLTAGTETTASTLAWAFHLLARHPEVERRLHAELdavlggrpatfedlp 276
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1005574924 275 --SLVPKAIEEVLRYRSPAQRIVRKVKKEIQIRGQTLQV--DQIISGWigSANRDSLHFKDADSFN-----IHRSRNPH- 344
Cdd:cd11049   277 rlTYTRRVVTEALRLYPPVWLLTRRTTADVELGGHRLPAgtEVAFSPY--ALHRDPEVYPDPERFDpdrwlPGRAAAVPr 354
                         170       180       190
                  ....*....|....*....|....*....|....*
gi 1005574924 345 ---LAFGHGIHFCLGAPLARLEAKIVLTEIMKKYK 376
Cdd:cd11049   355 gafIPFGAGARKCIGDTFALTELTLALATIASRWR 389
CYP714 cd20640
cytochrome P450 family 714; Cytochrome P450 family 714 (CYP714) belongs to the plant CYP72 ...
206-380 7.31e-06

cytochrome P450 family 714; Cytochrome P450 family 714 (CYP714) belongs to the plant CYP72 clan, which is generally associated with the metabolism of a diversity of fairly hydrophobic compounds including fatty acids and isoprenoids, with the catabolism of hormones (brassinosteroids and gibberellin, GA) and with the biosynthesis of cytokinins. CYP714 enzymes are involved in the biosynthesis of gibberellins (GAs) and the mechanism to control their bioactive endogenous levels. They contribute to the production of diverse GA compounds through various oxidations of C and D rings in both monocots and eudicots. CYP714B1 and CYP714B2 encode the enzyme GA 13-oxidase, which is required for GA1 biosynthesis, while CYP714D1 encodes GA 16a,17-epoxidase, which inactivates the non-13-hydroxy GAs in rice. Arabidopsis CYP714A1 is an inactivation enzyme that catalyzes the conversion of GA12 to 16-carboxylated GA12 (16-carboxy-16beta,17-dihydro GA12). CYP714 belongs to the large cytochrome P450 (P450, CYP) superfamily of heme-containing proteins that catalyze a variety of oxidative reactions of a large number of structurally different endogenous and exogenous compounds in organisms from all major domains of life. CYPs bind their diverse ligands in a buried, hydrophobic active site, which is accessed through a substrate access channel formed by two flexible helices and their connecting loop.


Pssm-ID: 410733 [Multi-domain]  Cd Length: 426  Bit Score: 47.79  E-value: 7.31e-06
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1005574924 206 RGKSKKDSNDIISLLVQSEADKNISGKE----VVSFCKLLLVAGNETTTNLLGNLLYCLIENPDVYKQIQQDVSLVPKA- 280
Cdd:cd20640   199 REEECDHEKDLLQAILEGARSSCDKKAEaedfIVDNCKNIYFAGHETTAVTAAWCLMLLALHPEWQDRVRAEVLEVCKGg 278
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1005574924 281 ----------------IEEVLRYRSPAQRIVRKVKKEIQIRGQTLQVDQIISGWIGSANRD-SLHFKDADSFNIHRSRN- 342
Cdd:cd20640   279 ppdadslsrmktvtmvIQETLRLYPPAAFVSREALRDMKLGGLVVPKGVNIWVPVSTLHLDpEIWGPDANEFNPERFSNg 358
                         170       180       190       200
                  ....*....|....*....|....*....|....*....|....*..
gi 1005574924 343 -------PH--LAFGHGIHFCLGAPLARLEAKIVLTEIMKKyksFSF 380
Cdd:cd20640   359 vaaackpPHsyMPFGAGARTCLGQNFAMAELKVLVSLILSK---FSF 402
CYP2U1 cd20666
cytochrome P450 family 2, subfamily U, polypeptide 1; CYP2U1 is a thymus- and brain-specific ...
241-402 9.47e-06

cytochrome P450 family 2, subfamily U, polypeptide 1; CYP2U1 is a thymus- and brain-specific cytochrome P450 that catalyzes omega- and (omega-1)-hydroxylation of fatty acids such as arachidonic acid, docosahexaenoic acid, and other long chain fatty acids. Mutations in CYP2U1 are associated with hereditary spastic paraplegia (HSP), a neurological disorder, and pigmentary degenerative maculopathy associated with progressive spastic paraplegia. CYP2U1 belongs to family 2 of the large cytochrome P450 (P450, CYP) superfamily of heme-containing proteins that catalyze a variety of oxidative reactions of a large number of structurally different endogenous and exogenous compounds in organisms from all major domains of life. CYPs bind their diverse ligands in a buried, hydrophobic active site, which is accessed through a substrate access channel formed by two flexible helices and their connecting loop.


Pssm-ID: 410759 [Multi-domain]  Cd Length: 426  Bit Score: 47.46  E-value: 9.47e-06
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1005574924 241 LLVAGNETTTN-LLGNLLYcLIENPDVYKQIQQDV----------SLVPKA--------IEEVLRYRS-PAQRIVRKVKK 300
Cdd:cd20666   236 LFIAGTDTTTNtLLWCLLY-MSLYPEVQEKVQAEIdtvigpdrapSLTDKAqmpfteatIMEVQRMTVvVPLSIPHMASE 314
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1005574924 301 EIQIRGQTLQVDQIISGWIGSANRDSLHFKDADSFNIHR---------SRNPHLAFGHGIHFCLGAPLARLEAKIVLTEI 371
Cdd:cd20666   315 NTVLQGYTIPKGTVIVPNLWSVHRDPAIWEKPDDFMPSRfldengqliKKEAFIPFGIGRRVCMGEQLAKMELFLMFVSL 394
                         170       180       190
                  ....*....|....*....|....*....|..
gi 1005574924 372 MkkyKSFSF-IDHNLPVPisSVSSVYGLKSLP 402
Cdd:cd20666   395 M---QSFTFlLPPNAPKP--SMEGRFGLTLAP 421
CYP27B1 cd20648
cytochrome P450 family 27, subfamily B, polypeptide 1, also called calcidiol 1-monooxygenase; ...
225-372 9.69e-06

cytochrome P450 family 27, subfamily B, polypeptide 1, also called calcidiol 1-monooxygenase; Cytochrome p450 27B1 (CYP27B1) is also called calcidiol 1-monooxygenase (EC 1.14.15.18), 25-hydroxyvitamin D(3) 1-alpha-hydroxylase (VD3 1A hydroxylase), 25-hydroxyvitamin D-1 alpha hydroxylase, 25-OHD-1 alpha-hydroxylase, 25-hydroxycholecalciferol 1-hydroxylase, or 25-hydroxycholecalciferol 1-monooxygenase. It catalyzes the conversion of 25-hydroxyvitamin D3 (25(OH)D3) to 1-alpha,25-dihydroxyvitamin D3 (1,25(OH)2D3 or calcitriol), and of 24,25-dihydroxyvitamin D3 (24,25(OH)(2)D3) to 1-alpha,24,25-trihydroxyvitamin D3 (1alpha,24,25(OH)(3)D3). It is also active with 25-hydroxy-24-oxo-vitamin D3, and has an important role in normal bone growth, calcium metabolism, and tissue differentiation. CYP27B1 belongs to the large cytochrome P450 (P450, CYP) superfamily of heme-containing proteins that catalyze a variety of oxidative reactions of a large number of structurally different endogenous and exogenous compounds in organisms from all major domains of life. CYPs bind their diverse ligands in a buried, hydrophobic active site, which is accessed through a substrate access channel formed by two flexible helices and their connecting loop.


Pssm-ID: 410741 [Multi-domain]  Cd Length: 430  Bit Score: 47.44  E-value: 9.69e-06
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1005574924 225 ADKNISGKEVVSFCKLLLVAGNETTTNLLGNLLYCLIENPDV----YKQIQQ-----------DVSLVP--KA-IEEVLR 286
Cdd:cd20648   226 AREKLPMKSIYGNVTELLLAGVDTISSTLSWSLYELSRHPDVqtalHREITAalkdnsvpsaaDVARMPllKAvVKEVLR 305
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1005574924 287 YRS--PAQ-RIVRKvkKEIQIRGQTLQVDQIISGWIGSANRDSLHFKDADSFN----IHRSRNPH----LAFGHGIHFCL 355
Cdd:cd20648   306 LYPviPGNaRVIPD--RDIQVGEYIIPKKTLITLCHYATSRDENQFPDPNSFRperwLGKGDTHHpyasLPFGFGKRSCI 383
                         170
                  ....*....|....*..
gi 1005574924 356 GAPLARLEAKIVLTEIM 372
Cdd:cd20648   384 GRRIAELEVYLALARIL 400
CYP59-like cd11051
cytochrome P450 family 59 and similar cytochrome P450s; This family is composed of Aspergillus ...
221-368 4.33e-05

cytochrome P450 family 59 and similar cytochrome P450s; This family is composed of Aspergillus nidulans cytochrome P450 59 (CYP59), also called sterigmatocystin biosynthesis P450 monooxygenase stcS, and similar fungal proteins. CYP59 is required for the conversion of versicolorin A to sterigmatocystin. This family belongs to the large cytochrome P450 (P450, CYP) superfamily of heme-containing proteins that catalyze a variety of oxidative reactions of a large number of structurally different endogenous and exogenous compounds in organisms from all major domains of life. CYPs bind their diverse ligands in a buried, hydrophobic active site, which is accessed through a substrate access channel formed by two flexible helices and their connecting loop.


Pssm-ID: 410674 [Multi-domain]  Cd Length: 403  Bit Score: 45.32  E-value: 4.33e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1005574924 221 VQSEADKNISGKEVVSFCKLLLVAGNETTTNLLGNLLYCLIENPDV-------------------YKQIQQDVSLVPK-- 279
Cdd:cd11051   173 LKPEVRKRFELERAIDQIKTFLFAGHDTTSSTLCWAFYLLSKHPEVlakvraehdevfgpdpsaaAELLREGPELLNQlp 252
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1005574924 280 ----AIEEVLRYRSPAQrIVRKVKKEIQIR---GQTLQVD-QIISGWIGSANRDSLHFKDADSFNIHR-----------S 340
Cdd:cd11051   253 yttaVIKETLRLFPPAG-TARRGPPGVGLTdrdGKEYPTDgCIVYVCHHAIHRDPEYWPRPDEFIPERwlvdeghelypP 331
                         170       180
                  ....*....|....*....|....*...
gi 1005574924 341 RNPHLAFGHGIHFCLGAPLARLEAKIVL 368
Cdd:cd11051   332 KSAWRPFERGPRNCIGQELAMLELKIIL 359
CYP27C1 cd20647
cytochrome P450 family 27, subfamily C, polypeptide 1, also called all-trans retinol 3, ...
203-376 6.10e-05

cytochrome P450 family 27, subfamily C, polypeptide 1, also called all-trans retinol 3,4-desaturase; Cytochrome P450 27C1 (CYP27C1) is also called all-trans retinol 3,4-desaturase. It catalyzes the conversion of all-trans retinol (also called vitamin A1, the precursor of 11-cis retinal) to 3,4-didehydroretinol (also called vitamin A2, the precursor of 11-cis 3,4-didehydroretinal). CYP27C1 belongs to the large cytochrome P450 (P450, CYP) superfamily of heme-containing proteins that catalyze a variety of oxidative reactions of a large number of structurally different endogenous and exogenous compounds in organisms from all major domains of life. CYPs bind their diverse ligands in a buried, hydrophobic active site, which is accessed through a substrate access channel formed by two flexible helices and their connecting loop.


Pssm-ID: 410740 [Multi-domain]  Cd Length: 433  Bit Score: 44.91  E-value: 6.10e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1005574924 203 QINRGKSKKDSndiisLLVQSEADKNISGKEVVSFCKLLLVAGNETTTNLLGNLLYCLIENPDVYKQIQQDV------SL 276
Cdd:cd20647   212 QMDRGEEVKGG-----LLTYLLVSKELTLEEIYANMTEMLLAGVDTTSFTLSWATYLLARHPEVQQQVYEEIvrnlgkRV 286
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1005574924 277 VPKAiEEVlryrsPAQRIVRKVKKE-------IQIRGQTLQVDQIISGWI-----------GSANRDSLHFKDADSFNIH 338
Cdd:cd20647   287 VPTA-EDV-----PKLPLIRALLKEtlrlfpvLPGNGRVTQDDLIVGGYLipkgtqlalchYSTSYDEENFPRAEEFRPE 360
                         170       180       190       200
                  ....*....|....*....|....*....|....*....|....*...
gi 1005574924 339 R-SRNPHL---------AFGHGIHFCLGAPLARLEAKIVLTEIMKKYK 376
Cdd:cd20647   361 RwLRKDALdrvdnfgsiPFGYGIRSCIGRRIAELEIHLALIQLLQNFE 408
CYP26B1 cd20637
cytochrome P450 family 26, subfamily B, polypeptide 1; Cytochrome P450 26B1 (CYP26B1) is a ...
92-404 8.29e-05

cytochrome P450 family 26, subfamily B, polypeptide 1; Cytochrome P450 26B1 (CYP26B1) is a retinoic acid-metabolizing cytochrome that plays key roles in retinoic acid (RA) metabolism. It is an all-trans-retinoic acid (atRA) hydroxylase that catalyzes the formation of similar metabolites as CYP26A1. RA is a critical signaling molecule that regulates gene transcription and the cell cycle. In rats, CYP26B1 regulates sex-specific timing of meiotic initiation, independent of RA signaling. CYP26B1 belongs to the large cytochrome P450 (P450, CYP) superfamily of heme-containing proteins that catalyze a variety of oxidative reactions of a large number of structurally different endogenous and exogenous compounds in organisms from all major domains of life. CYPs bind their diverse ligands in a buried, hydrophobic active site, which is accessed through a substrate access channel formed by two flexible helices and their connecting loop.


Pssm-ID: 410730 [Multi-domain]  Cd Length: 430  Bit Score: 44.46  E-value: 8.29e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1005574924  92 HTQIRSIVNRSFTPKSLKVWESRIQQITNDIL-IQLSNRDNFDIVQELFYPLPVIVIAEMLGVSVNDMD------RFKKW 164
Cdd:cd20637    79 HRHKRKVFSKLFSHEALESYLPKIQQVIQDTLrVWSSNPEPINVYQEAQKLTFRMAIRVLLGFRVSEEElshlfsVFQQF 158
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1005574924 165 SDIIVSSPNHDDPDYLKEFFHIRLQAENELEEFFEEIIQINRGKSKKDSNDIislLVQS--EADKNISGKEVVSFCKLLL 242
Cdd:cd20637   159 VENVFSLPLDLPFSGYRRGIRARDSLQKSLEKAIREKLQGTQGKDYADALDI---LIESakEHGKELTMQELKDSTIELI 235
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1005574924 243 VAGNETTTNLLGNLLYCLIENPDVYKQIQQDV---SLVPKA---------------------IEEVLRYRSPAQRIVRKV 298
Cdd:cd20637   236 FAAFATTASASTSLIMQLLKHPGVLEKLREELrsnGILHNGclcegtlrldtisslkyldcvIKEVLRLFTPVSGGYRTA 315
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1005574924 299 KkeiqirgQTLQVD--QIISGW-----IGSANRDSLHFKDADSFNIHR----------SRNPHLAFGHGIHFCLGAPLAR 361
Cdd:cd20637   316 L-------QTFELDgfQIPKGWsvlysIRDTHDTAPVFKDVDAFDPDRfgqersedkdGRFHYLPFGGGVRTCLGKQLAK 388
                         330       340       350       360
                  ....*....|....*....|....*....|....*....|...
gi 1005574924 362 LEAKIVLTEIMKKyKSFSFIDHNLPvPISSVSSVYGLKSLPVK 404
Cdd:cd20637   389 LFLKVLAVELAST-SRFELATRTFP-RMTTVPVVHPVDGLRVK 429
CYP_PhacA-like cd11066
fungal cytochrome P450s similar to Aspergillus nidulans phenylacetate 2-hydroxylase; This ...
232-363 1.13e-04

fungal cytochrome P450s similar to Aspergillus nidulans phenylacetate 2-hydroxylase; This group includes Aspergillus nidulans phenylacetate 2-hydroxylase (encoded by the phacA gene) and similar fungal cytochrome P450s. PhacA catalyzes the ortho-hydroxylation of phenylacetate, the first step of A. nidulans phenylacetate catabolism. The PhacA-like subfamily belongs to the large cytochrome P450 (P450, CYP) superfamily of heme-containing proteins that catalyze a variety of oxidative reactions of a large number of structurally different endogenous and exogenous compounds in organisms from all major domains of life. CYPs bind their diverse ligands in a buried, hydrophobic active site, which is accessed through a substrate access channel formed by two flexible helices and their connecting loop.


Pssm-ID: 410689 [Multi-domain]  Cd Length: 434  Bit Score: 44.23  E-value: 1.13e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1005574924 232 KEVVSFCKLLLVAGNETTTNLLGNLLYCLIENP------DVYKQIQ----------------QDVSLVPKAIEEVLRYRS 289
Cdd:cd11066   227 AELQSICLTMVSAGLDTVPLNLNHLIGHLSHPPgqeiqeKAYEEILeaygndedawedcaaeEKCPYVVALVKETLRYFT 306
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1005574924 290 P-AQRIVRKVKKEIQIRGQTLQVDQII--SGWigSANRDSLHFKDADSFNIHR----SRN-----PHLAFGHGIHFCLGA 357
Cdd:cd11066   307 VlPLGLPRKTTKDIVYNGAVIPAGTILfmNAW--AANHDPEHFGDPDEFIPERwldaSGDlipgpPHFSFGAGSRMCAGS 384

                  ....*.
gi 1005574924 358 PLARLE 363
Cdd:cd11066   385 HLANRE 390
CYP2W1 cd20671
cytochrome P450 family 2, subfamily W, polypeptide 1; Cytochrome P450 2W1 (CYP2W1) is ...
216-376 1.22e-04

cytochrome P450 family 2, subfamily W, polypeptide 1; Cytochrome P450 2W1 (CYP2W1) is expressed during development of the gastrointestinal tract, is silenced after birth in the intestine and colon by epigenetic modifications, but is activated following demethylation in colorectal cancer (CRC). Its expression levels in CRC correlate with the degree of malignancy, are higher in metastases and are predictive of survival. Thus, it is an attractive tumor-specific diagnostic and therapeutic target. CYP2W1 belongs to family 2 of the large cytochrome P450 (P450, CYP) superfamily of heme-containing proteins that catalyze a variety of oxidative reactions of a large number of structurally different endogenous and exogenous compounds in organisms from all major domains of life. CYPs bind their diverse ligands in a buried, hydrophobic active site, which is accessed through a substrate access channel formed by two flexible helices and their connecting loop.


Pssm-ID: 410764 [Multi-domain]  Cd Length: 422  Bit Score: 44.02  E-value: 1.22e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1005574924 216 IISLLVQSEADK---NISGKEVVSFCKL-LLVAGNETTTNLLGNLLYCLIENPDVYKQIQQDVSLV------PK------ 279
Cdd:cd20671   202 IEALIQKQEEDDpkeTLFHDANVLACTLdLVMAGTETTSTTLQWAVLLMMKYPHIQKRVQEEIDRVlgpgclPNyedrka 281
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1005574924 280 ------AIEEVLRYRSPAQRIVRKVKKEIQIRGQTLQVDQIISGWIGSANRDSLHFKDADSFNIHR---------SRNPH 344
Cdd:cd20671   282 lpytsaVIHEVQRFITLLPHVPRCTAADTQFKGYLIPKGTPVIPLLSSVLLDKTQWETPYQFNPNHfldaegkfvKKEAF 361
                         170       180       190
                  ....*....|....*....|....*....|..
gi 1005574924 345 LAFGHGIHFCLGAPLARLEAKIVLTEIMKKYK 376
Cdd:cd20671   362 LPFSAGRRVCVGESLARTELFIFFTGLLQKFT 393
CYP1D1 cd20677
cytochrome P450 family 1, subfamily D, polypeptide 1; The cytochrome P450 1D1 (CYP1D1) gene is ...
215-402 1.33e-04

cytochrome P450 family 1, subfamily D, polypeptide 1; The cytochrome P450 1D1 (CYP1D1) gene is pseudogenized in humans because of five nonsense mutations in the putative coding region. However, in other organisms including cynomolgus monkey, CYP1D1 is a functional drug-metabolizing enzyme that is highly expressed in the liver. CYP1D1 belongs to the large cytochrome P450 (P450, CYP) superfamily of heme-containing proteins that catalyze a variety of oxidative reactions of a large number of structurally different endogenous and exogenous compounds in organisms from all major domains of life. CYPs bind their diverse ligands in a buried, hydrophobic active site, which is accessed through a substrate access channel formed by two flexible helices and their connecting loop.


Pssm-ID: 410770 [Multi-domain]  Cd Length: 435  Bit Score: 43.93  E-value: 1.33e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1005574924 215 DIISLLVQ-----SEADKN--ISGKEVVSFCKLLLVAGNET-TTNLLGNLLYcLIENPDVYKQIQQDV------SLVPKA 280
Cdd:cd20677   211 DITDALIAlcqerKAEDKSavLSDEQIISTVNDIFGAGFDTiSTALQWSLLY-LIKYPEIQDKIQEEIdekiglSRLPRF 289
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1005574924 281 ------------IEEVLRYRS--PAQrIVRKVKKEIQIRGQTLQVDQIISGWIGSANRDSLHFKDADSFNIHR--SRNPH 344
Cdd:cd20677   290 edrkslhyteafINEVFRHSSfvPFT-IPHCTTADTTLNGYFIPKDTCVFINMYQVNHDETLWKDPDLFMPERflDENGQ 368
                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1005574924 345 L---------AFGHGIHFCLGAPLARLEAKIVLTEIMKKYKSFSFIDHNLpvpisSVSSVYGLKSLP 402
Cdd:cd20677   369 LnkslvekvlIFGMGVRKCLGEDVARNEIFVFLTTILQQLKLEKPPGQKL-----DLTPVYGLTMKP 430
CYP61_CYP710 cd11082
C-22 sterol desaturase subfamily, such as fungal cytochrome P450 61 and plant cytochrome P450 ...
66-360 2.14e-04

C-22 sterol desaturase subfamily, such as fungal cytochrome P450 61 and plant cytochrome P450 710; C-22 sterol desaturase (EC 1.14.19.41), also called sterol 22-desaturase, is required for the formation of the C-22 double bond in the sterol side chain of delta22-unsaturated sterols, which are present specifically in fungi and plants. This enzyme is also called cytochrome P450 61 (CYP61) in fungi and cytochrome P450 710 (CYP710) in plants. The CYP61/CYP710 subfamily belongs to the large cytochrome P450 (P450, CYP) superfamily of heme-containing proteins that catalyze a variety of oxidative reactions of a large number of structurally different endogenous and exogenous compounds in organisms from all major domains of life. CYPs bind their diverse ligands in a buried, hydrophobic active site, which is accessed through a substrate access channel formed by two flexible helices and their connecting loop.


Pssm-ID: 410703 [Multi-domain]  Cd Length: 415  Bit Score: 43.39  E-value: 2.14e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1005574924  66 EFFSNIMPEKKK---SPFPQSILG------MDPPKHTQIRSIVNRSFTPKSLKV---------------WESRIQQITND 121
Cdd:cd11082    23 KIFSNNRPDAFHlclHPNAKKILGednlifMFGEEHKELRKSLLPLFTRKALGLylpiqervirkhlakWLENSKSGDKP 102
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1005574924 122 ILIQLSNRD-NFDIVQELF---YpLPviviaemlgvsvNDMDRFkkwsdiivsspNHDDPDYLKEF--FHIRL------- 188
Cdd:cd11082   103 IEMRPLIRDlNLETSQTVFvgpY-LD------------DEARRF-----------RIDYNYFNVGFlaLPVDFpgtalwk 158
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1005574924 189 --QAENELEEFFEEIIQINRGKSKKDSN-----DIISLLVQSEA---------------DKNISGKeVVSFckllLVAGN 246
Cdd:cd11082   159 aiQARKRIVKTLEKCAAKSKKRMAAGEEptcllDFWTHEILEEIkeaeeegepppphssDEEIAGT-LLDF----LFASQ 233
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1005574924 247 ETTTNLLGNLLYCLIENPDVYKQIQQDVSLV-------------------PKAIEEVLRYRSPAQRIVRKVKKEIQI-RG 306
Cdd:cd11082   234 DASTSSLVWALQLLADHPDVLAKVREEQARLrpndeppltldlleemkytRQVVKEVLRYRPPAPMVPHIAKKDFPLtED 313
                         330       340       350       360       370       380
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1005574924 307 QTLQVDQIISGWIGSANRDSlhFKDADSFNIHR-----------SRNpHLAFGHGIHFCLGAPLA 360
Cdd:cd11082   314 YTVPKGTIVIPSIYDSCFQG--FPEPDKFDPDRfsperqedrkyKKN-FLVFGAGPHQCVGQEYA 375
CYP2AB1-like cd20667
cytochrome P450, family 2, subfamily AB, polypeptide 1 and similar cytochrome P450s; The ...
202-399 2.23e-04

cytochrome P450, family 2, subfamily AB, polypeptide 1 and similar cytochrome P450s; The function of CYP2AB1 is unknown. CYP2AB1 belongs to family 2 of the large cytochrome P450 (P450, CYP) superfamily of heme-containing proteins that catalyze a variety of oxidative reactions of a large number of structurally different endogenous and exogenous compounds in organisms from all major domains of life. CYPs bind their diverse ligands in a buried, hydrophobic active site, which is accessed through a substrate access channel formed by two flexible helices and their connecting loop.


Pssm-ID: 410760 [Multi-domain]  Cd Length: 423  Bit Score: 43.29  E-value: 2.23e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1005574924 202 IQINRGKSKKDSNDIISL-LVQ-----SEADKNISGKEVVSFCKLLLVAGNETT-TNLLGNLLYcLIENPDVYKQIQQDV 274
Cdd:cd20667   188 VIRHELRTNEAPQDFIDCyLAQitktkDDPVSTFSEENMIQVVIDLFLGGTETTaTTLHWALLY-MVHHPEIQEKVQQEL 266
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1005574924 275 SLVPKA------------------IEEVLRYRS-PAQRIVRKVKKEIQIRGQTLQVDQIISGWIGSANRDSLHFKDADSF 335
Cdd:cd20667   267 DEVLGAsqlicyedrkrlpytnavIHEVQRLSNvVSVGAVRQCVTSTTMHGYYVEKGTIILPNLASVLYDPECWETPHKF 346
                         170       180       190       200       210       220       230
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1005574924 336 NIH---------RSRNPHLAFGHGIHFCLGAPLARLEAKIVLTEIMkkyKSFSFidhNLPVPISSVSSVYGLK 399
Cdd:cd20667   347 NPGhfldkdgnfVMNEAFLPFSAGHRVCLGEQLARMELFIFFTTLL---RTFNF---QLPEGVQELNLEYVFG 413
CYP4V cd20680
cytochrome P450 family 4, subfamily V; Cytochrome P450 family 4, subfamily V, polypeptide 2 ...
219-375 3.48e-04

cytochrome P450 family 4, subfamily V; Cytochrome P450 family 4, subfamily V, polypeptide 2 (CYP4V2) is the most characterized member of the CYP4V subfamily. It is a selective omega-hydroxylase of saturated, medium-chain fatty acids, such as laurate, myristate and palmitate, with high catalytic efficiency toward myristate. Polymorphisms in the CYP4V2 gene cause Bietti's crystalline corneoretinal dystrophy (BCD), a recessive degenerative retinopathy that is characterized clinically by a progressive decline in central vision, night blindness, and constriction of the visual field. The CYP4V subfamily belongs to the large cytochrome P450 (P450, CYP) superfamily of heme-containing proteins that catalyze a variety of oxidative reactions of a large number of structurally different endogenous and exogenous compounds in organisms from all major domains of life. CYPs bind their diverse ligands in a buried, hydrophobic active site, which is accessed through a substrate access channel formed by two flexible helices and their connecting loop.


Pssm-ID: 410773 [Multi-domain]  Cd Length: 440  Bit Score: 42.44  E-value: 3.48e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1005574924 219 LLVQSEADKNISGKEVVSFCKLLLVAGNETTTNLLGNLLYCLIENPDVYKQIQQDVSLV------PKAIEEV--LRYRSP 290
Cdd:cd20680   229 LSVTDEEGNKLSHEDIREEVDTFMFEGHDTTAAAMNWSLYLLGSHPEVQRKVHKELDEVfgksdrPVTMEDLkkLRYLEC 308
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1005574924 291 AQRIVRKVKKEIQIRGQTLQVDQIISGW----------IGSA-NRDSLHFKDADSFNIHR-------SRNPH--LAFGHG 350
Cdd:cd20680   309 VIKESLRLFPSVPLFARSLCEDCEIRGFkvpkgvnaviIPYAlHRDPRYFPEPEEFRPERffpenssGRHPYayIPFSAG 388
                         170       180
                  ....*....|....*....|....*
gi 1005574924 351 IHFCLGAPLARLEAKIVLTEIMKKY 375
Cdd:cd20680   389 PRNCIGQRFALMEEKVVLSCILRHF 413
CYP2K cd20664
cytochrome P450 family 2, subfamily K; Members of CYP2K are present in fish, birds, and ...
241-407 4.41e-04

cytochrome P450 family 2, subfamily K; Members of CYP2K are present in fish, birds, and amphibians. CYP2K6 from zebrafish has been shown to catalyze the conversion of aflatoxin B1 (AFB1) to its cytotoxic derivative AFB1 exo-8,9-epoxide, while its ortholog in rainbow trout CYP2K1 is also capable of oxidizing lauric acid. In birds, CYP2K is one of the largest CYP2 subfamilies. The CYP2K subfamily belongs to the large cytochrome P450 (P450, CYP) superfamily of heme-containing proteins that catalyze a variety of oxidative reactions of a large number of structurally different endogenous and exogenous compounds in organisms from all major domains of life. CYPs bind their diverse ligands in a buried, hydrophobic active site, which is accessed through a substrate access channel formed by two flexible helices and their connecting loop.


Pssm-ID: 410757 [Multi-domain]  Cd Length: 424  Bit Score: 42.10  E-value: 4.41e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1005574924 241 LLVAGNETTTNLLGNLLYCLIENPDVYKQIQQDVSLVPKAIEEVLRYRS----------PAQRIV--------RKVKKEI 302
Cdd:cd20664   233 LFGAGTDTTGTTLRWGLLLMMKYPEIQKKVQEEIDRVIGSRQPQVEHRKnmpytdavihEIQRFAnivpmnlpHATTRDV 312
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1005574924 303 QIRGQTLQVDQIISGWIGSANRDSLHFKDADSFNIHR---------SRNPHLAFGHGIHFCLGAPLARLEAKIVLTEIMK 373
Cdd:cd20664   313 TFRGYFIPKGTYVIPLLTSVLQDKTEWEKPEEFNPEHfldsqgkfvKRDAFMPFSAGRRVCIGETLAKMELFLFFTSLLQ 392
                         170       180       190
                  ....*....|....*....|....*....|....*...
gi 1005574924 374 KyksFSFidhNLPVPISSV----SSVYGLKSLPVKSEV 407
Cdd:cd20664   393 R---FRF---QPPPGVSEDdldlTPGLGFTLNPLPHQL 424
CYP11A1 cd20643
cytochrome P450 family 11, subfamily A, polypeptide 1, also called cholesterol side-chain ...
241-376 5.32e-04

cytochrome P450 family 11, subfamily A, polypeptide 1, also called cholesterol side-chain cleavage enzyme; Cytochrome P450 11A1 (CYP11A1, EC 1.14.15.6) is also called cholesterol side-chain cleavage enzyme, cholesterol desmolase, or cytochrome P450(scc). It catalyzes the side-chain cleavage reaction of cholesterol to form pregnenolone, the precursor of all steroid hormones. Missense or nonsense mutations of the CYP11A1 gene cause mild to severe early-onset adrenal failure depending on the severity of the enzyme dysfunction/deficiency. CYP11A1 belongs to the large cytochrome P450 (P450, CYP) superfamily of heme-containing proteins that catalyze a variety of oxidative reactions of a large number of structurally different endogenous and exogenous compounds in organisms from all major domains of life. CYPs bind their diverse ligands in a buried, hydrophobic active site, which is accessed through a substrate access channel formed by two flexible helices and their connecting loop.


Pssm-ID: 410736 [Multi-domain]  Cd Length: 425  Bit Score: 42.01  E-value: 5.32e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1005574924 241 LLVAGNETTTNLLGNLLYCLIENPDVYKQIQ------------------QDVSLVPKAIEEVLRYRSPAQRIVRKVKKEI 302
Cdd:cd20643   242 LMAGGVDTTSMTLQWTLYELARNPNVQEMLRaevlaarqeaqgdmvkmlKSVPLLKAAIKETLRLHPVAVSLQRYITEDL 321
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1005574924 303 QIRGQTLQVDQIISGWIGSANRDSLHFKDADSFNIHR------SRNPHLAFGHGIHFCLGAPLARLEAKIVLTEIMKKYK 376
Cdd:cd20643   322 VLQNYHIPAGTLVQVGLYAMGRDPTVFPKPEKYDPERwlskdiTHFRNLGFGFGPRQCLGRRIAETEMQLFLIHMLENFK 401
CYP2C-like cd20665
cytochrome P450 family 2, subfamily C, and similar cytochrome P450s; This CYP2C-like group ...
241-402 8.07e-04

cytochrome P450 family 2, subfamily C, and similar cytochrome P450s; This CYP2C-like group includes CYP2C, and similar CYPs including mammalian CYP2E1, also called 4-nitrophenol 2-hydroxylase, as well as chicken CYP2H1 and CYP2H2. The CYP2C subfamily is composed of four human members (CYP2C8, CYP2C9, CYP2C18, CYP2C19) that metabolize approximately 20% of clinically used drugs, and all four exhibit genetic polymorphisms that results in toxicity or altered efficacy of some drugs in affected individuals. CYP2E1 participates in the metabolism of endogenous substrates, including acetone and fatty acids, and exogenous compounds such as anesthetics, ethanol, nicotine, acetaminophen, aspartame, and chlorzoxazone, among others. The CYP2C-like subfamily belongs to the large cytochrome P450 (P450, CYP) superfamily of heme-containing proteins that catalyze a variety of oxidative reactions of a large number of structurally different endogenous and exogenous compounds in organisms from all major domains of life. CYPs bind their diverse ligands in a buried, hydrophobic active site, which is accessed through a substrate access channel formed by two flexible helices and their connecting loop.


Pssm-ID: 410758 [Multi-domain]  Cd Length: 425  Bit Score: 41.48  E-value: 8.07e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1005574924 241 LLVAGNETTTNLLGNLLYCLIENPDVYKQIQQDvslvpkaIEEVL-RYRSPA-----------------QRIV------- 295
Cdd:cd20665   234 LFGAGTETTSTTLRYGLLLLLKHPEVTAKVQEE-------IDRVIgRHRSPCmqdrshmpytdaviheiQRYIdlvpnnl 306
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1005574924 296 -RKVKKEIQIRGQTLQVDQIISGWIGSANRDSLHFKDADSF----------NIHRSrNPHLAFGHGIHFCLGAPLARLEA 364
Cdd:cd20665   307 pHAVTCDTKFRNYLIPKGTTVITSLTSVLHDDKEFPNPEKFdpghfldengNFKKS-DYFMPFSAGKRICAGEGLARMEL 385
                         170       180       190
                  ....*....|....*....|....*....|....*...
gi 1005574924 365 KIVLTEIMKKYKSFSFIDhnlPVPISSVSSVYGLKSLP 402
Cdd:cd20665   386 FLFLTTILQNFNLKSLVD---PKDIDTTPVVNGFASVP 420
PLN02169 PLN02169
fatty acid (omega-1)-hydroxylase/midchain alkane hydroxylase
203-392 8.71e-04

fatty acid (omega-1)-hydroxylase/midchain alkane hydroxylase


Pssm-ID: 177826 [Multi-domain]  Cd Length: 500  Bit Score: 41.53  E-value: 8.71e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1005574924 203 QINRGKSKKDSNDIISLLVQSEADKNI-----SGKEVVSFCKLLLVAGNETTTNLLGNLLYCLIENPDVYKQIQQDVS-- 275
Cdd:PLN02169  266 EISRAETEPYSKDALTYYMNVDTSKYKllkpkKDKFIRDVIFSLVLAGRDTTSSALTWFFWLLSKHPQVMAKIRHEINtk 345
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1005574924 276 ----------LVPKAIEEVLR--------YRSPAQRIV----RKVKKEIQIRGQTLQVDQIISGWigsaNRDSLHFKD-- 331
Cdd:PLN02169  346 fdnedleklvYLHAALSESMRlypplpfnHKAPAKPDVlpsgHKVDAESKIVICIYALGRMRSVW----GEDALDFKPer 421
                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1005574924 332 --ADSFNI-HRSRNPHLAFGHGIHFCLGAPLARLEAKIVLTEIMKKYkSFSFIDHNLPVPISSV 392
Cdd:PLN02169  422 wiSDNGGLrHEPSYKFMAFNSGPRTCLGKHLALLQMKIVALEIIKNY-DFKVIEGHKIEAIPSI 484
CYP11B cd20644
cytochrome P450 family 11, subfamily B subfamily; Cytochrome P450 11B (CYP11B) enzymes ...
242-408 1.09e-03

cytochrome P450 family 11, subfamily B subfamily; Cytochrome P450 11B (CYP11B) enzymes catalyze the final steps in the production of glucocorticoids and mineralocorticoids that takes place in the adrenal gland. There are two human CYP11B isoforms: Cyb11B1 (11-beta-hydroxylase or P45011beta), which catalyzes the final step of cortisol synthesis by a one-step reaction from 11-deoxycortisol; and CYP11B2 (aldosterone synthase or P450aldo), which catalyzes three steps in the synthesis of aldosterone. The CYP11B subfamily belongs to the large cytochrome P450 (P450, CYP) superfamily of heme-containing proteins that catalyze a variety of oxidative reactions of a large number of structurally different endogenous and exogenous compounds in organisms from all major domains of life. CYPs bind their diverse ligands in a buried, hydrophobic active site, which is accessed through a substrate access channel formed by two flexible helices and their connecting loop.


Pssm-ID: 410737 [Multi-domain]  Cd Length: 428  Bit Score: 40.98  E-value: 1.09e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1005574924 242 LVAGNETTTNLlgNLLYCLIE---NPDVYKQIQQDV------------------SLVPKAIEEVLRYRSPAQRIVRKVKK 300
Cdd:cd20644   240 LTAGGVDTTAF--PLLFTLFElarNPDVQQILRQESlaaaaqisehpqkaltelPLLKAALKETLRLYPVGITVQRVPSS 317
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1005574924 301 EIQIRGQTLQVDQIISGWIGSANRDSLHFKDADSFNIHR-------SRN-PHLAFGHGIHFCLGAPLARLEAKIVLTEIM 372
Cdd:cd20644   318 DLVLQNYHIPAGTLVQVFLYSLGRSAALFPRPERYDPQRwldirgsGRNfKHLAFGFGMRQCLGRRLAEAEMLLLLMHVL 397
                         170       180       190
                  ....*....|....*....|....*....|....*.
gi 1005574924 373 KKYKsfsfIDhnlPVPISSVSSVYGLKSLPVKSEVI 408
Cdd:cd20644   398 KNFL----VE---TLSQEDIKTVYSFILRPEKPPLL 426
CYP2R1 cd20661
cytochrome P450 2R1; CYP2R1, also called vitamin D 25-hydroxylase (EC 1.14.14.24), is a ...
241-375 2.23e-03

cytochrome P450 2R1; CYP2R1, also called vitamin D 25-hydroxylase (EC 1.14.14.24), is a microsomal enzyme that is required for the activation of vitamin D; it catalyzes the initial step converting vitamin D into 25-hydroxyvitamin D (25(OH)D), the major circulating metabolite of vitamin D. The 1alpha-hydroxylation of 25(OH)D by CYP27B1 generates the fully active vitamin D metabolite, 1,25-dihydroxyvitamin D (1,25(OH)2D). Mutations in the CYP2R1 gene are associated with an atypical form of vitamin D-deficiency rickets, which has been classified as vitamin D dependent rickets type 1B. CYP2R1 belongs to family 2 of the large cytochrome P450 (P450, CYP) superfamily of heme-containing proteins that catalyze a variety of oxidative reactions of a large number of structurally different endogenous and exogenous compounds in organisms from all major domains of life. CYPs bind their diverse ligands in a buried, hydrophobic active site, which is accessed through a substrate access channel formed by two flexible helices and their connecting loop.


Pssm-ID: 410754 [Multi-domain]  Cd Length: 436  Bit Score: 40.18  E-value: 2.23e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1005574924 241 LLVAGNETTTNLLGNLLYCLIENPDVYKQIQQDVSLV------------------PKAIEEVLRYRSPAQR-IVRKVKKE 301
Cdd:cd20661   246 LIIAGTETTTNVLRWAILFMALYPNIQGQVQKEIDLVvgpngmpsfedkckmpytEAVLHEVLRFCNIVPLgIFHATSKD 325
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1005574924 302 IQIRGQTLQVDQIISGWIGSANRDSLHFKDADSFNIHR---------SRNPHLAFGHGIHFCLGAPLARLEAKIVLTEIM 372
Cdd:cd20661   326 AVVRGYSIPKGTTVITNLYSVHFDEKYWSDPEVFHPERfldsngqfaKKEAFVPFSLGRRHCLGEQLARMEMFLFFTALL 405

                  ...
gi 1005574924 373 KKY 375
Cdd:cd20661   406 QRF 408
CYP64-like cd11065
cytochrome P450 family 64-like fungal cytochrome P450s; This group includes Aspergillus flavus ...
241-361 2.24e-03

cytochrome P450 family 64-like fungal cytochrome P450s; This group includes Aspergillus flavus cytochrome P450 64 (CYP64), also called O-methylsterigmatocystin (OMST) oxidoreductase or aflatoxin B synthase or aflatoxin biosynthesis protein Q, and similar fungal cytochrome P450s. CYP64 converts OMST to aflatoxin B1 and converts dihydro-O-methylsterigmatocystin (DHOMST) to aflatoxin B2 in the aflatoxin biosynthesis pathway. The CYP64-like subfamily belongs to the large cytochrome P450 (P450, CYP) superfamily of heme-containing proteins that catalyze a variety of oxidative reactions of a large number of structurally different endogenous and exogenous compounds in organisms from all major domains of life. CYPs bind their diverse ligands in a buried, hydrophobic active site, which is accessed through a substrate access channel formed by two flexible helices and their connecting loop.


Pssm-ID: 410688 [Multi-domain]  Cd Length: 425  Bit Score: 39.87  E-value: 2.24e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1005574924 241 LLVAGNETTTNLLGNLLYCLIENPDVYKQIQQ---------------DVSLVP--KA-IEEVLRYRSPAQR-IVRKVKKE 301
Cdd:cd11065   231 LYEAGSDTTASTLQTFILAMALHPEVQKKAQEeldrvvgpdrlptfeDRPNLPyvNAiVKEVLRWRPVAPLgIPHALTED 310
                          90       100       110       120       130       140       150
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1005574924 302 IQIRGQTLQVDQIIsgwIGSA---NRDSLHFKDADSFN-----------IHRSRNPHLAFGHGIHFCLGAPLAR 361
Cdd:cd11065   311 DEYEGYFIPKGTTV---IPNAwaiHHDPEVYPDPEEFDperylddpkgtPDPPDPPHFAFGFGRRICPGRHLAE 381
CYP93 cd20655
cytochrome P450 family 93; The cytochrome P450 family 93 (CYP93) is specifically found in ...
203-360 4.18e-03

cytochrome P450 family 93; The cytochrome P450 family 93 (CYP93) is specifically found in flowering plants and could be classified into ten subfamilies, CYP93A-K. CYP93A appears to be the ancestor that was derived in flowering plants, and the remaining subfamiles show lineage-specific distribution: CYP93B and CYP93C are present in dicots; CYP93F is distributed only in Poaceae; CYP93G and CYP93J are monocot-specific; CYP93E is unique to legumes; CYP93H and CYP93K are only found in Aquilegia coerulea; and CYP93D is Brassicaceae-specific. Members of this family include: Glycyrrhiza echinata CYP93B1, also called licodione synthase (EC 1.14.14.140), that catalyzes the formation of licodione and 2-hydroxynaringenin from (2S)-liquiritigenin and (2S)-naringenin, respectively; and Glycine max CYP93A1, also called 3,9-dihydroxypterocarpan 6A-monooxygenase (EC 1.14.14.93), that is involved in the biosynthesis of the phytoalexin glyceollin. CYP93 belongs to the large cytochrome P450 (P450, CYP) superfamily of heme-containing proteins that catalyze a variety of oxidative reactions of a large number of structurally different endogenous and exogenous compounds in organisms from all major domains of life. CYPs bind their diverse ligands in a buried, hydrophobic active site, which is accessed through a substrate access channel formed by two flexible helices and their connecting loop.


Pssm-ID: 410748 [Multi-domain]  Cd Length: 433  Bit Score: 39.12  E-value: 4.18e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1005574924 203 QINRGKSKKDSNDIISLLVQSEADKN----ISGKEVVSFCKLLLVAGNETTTNLLGNLLYCLIENPDVYKQIQQDV-SLV 277
Cdd:cd20655   194 EKRKKRKEGGSKDLLDILLDAYEDENaeykITRNHIKAFILDLFIAGTDTSAATTEWAMAELINNPEVLEKAREEIdSVV 273
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1005574924 278 PK-----------------AIEEVLRYRSPAQRIVRKVKKEIQIRG-----QTLQVdqiISGW-IGsanRDSLHFKDADS 334
Cdd:cd20655   274 GKtrlvqesdlpnlpylqaVVKETLRLHPPGPLLVRESTEGCKINGydipeKTTLF---VNVYaIM---RDPNYWEDPLE 347
                         170       180       190       200
                  ....*....|....*....|....*....|....*....|.
gi 1005574924 335 FNIHR------------SRNPH---LAFGHGIHFCLGAPLA 360
Cdd:cd20655   348 FKPERflassrsgqeldVRGQHfklLPFGSGRRGCPGASLA 388
CYP77_89 cd11075
cytochrome P450 families 77 and 89, and similar cytochrome P450s; This group includes ...
206-326 4.71e-03

cytochrome P450 families 77 and 89, and similar cytochrome P450s; This group includes cytochrome P450 families 73 (CYP77) and 89 (CYP89), which are sister families that share a common ancestor. CYP89, present only in angiosperms, is younger than CYP77, which is already found in lycopods; thus, CYP89 may have evolved from CYP77 after duplication and divergence. Also included in this group is ent-kaurene oxidase, called CYP701A3 in Arabidopsis thaliana and CYP701B1 in Physcomitrella patens, that catalyzes the oxidation of ent-kaurene to form ent-kaurenoic acid. CYP701A3 is sensitive to inhibitor uniconazole-P while CYP701B1 is not. This CYP77/89 group belongs to the large cytochrome P450 (P450, CYP) superfamily of heme-containing proteins that catalyze a variety of oxidative reactions of a large number of structurally different endogenous and exogenous compounds in organisms from all major domains of life. CYPs bind their diverse ligands in a buried, hydrophobic active site, which is accessed through a substrate access channel formed by two flexible helices and their connecting loop.


Pssm-ID: 410698 [Multi-domain]  Cd Length: 433  Bit Score: 39.15  E-value: 4.71e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1005574924 206 RGKSKKDSNDIISLLVQSEADKNISGK------EVVSFCKLLLVAGNETTTNLLGNLLYCLIENPDV----YKQIQQ--- 272
Cdd:cd11075   198 RASGEADKDYTDFLLLDLLDLKEEGGErkltdeELVSLCSEFLNAGTDTTATALEWAMAELVKNPEIqeklYEEIKEvvg 277
                          90       100       110       120       130       140
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1005574924 273 --------DVSLVP--KA-IEEVLRYRSPAQRIV-RKVKKEIQIRGQTLQVDQIISGWIGSANRDS 326
Cdd:cd11075   278 deavvteeDLPKMPylKAvVLETLRRHPPGHFLLpHAVTEDTVLGGYDIPAGAEVNFNVAAIGRDP 343
CYP26A1 cd20638
cytochrome P450 family 26, subfamily A, polypeptide 1; Cytochrome P450s 26A1 (CYP26A1) is a ...
215-404 5.09e-03

cytochrome P450 family 26, subfamily A, polypeptide 1; Cytochrome P450s 26A1 (CYP26A1) is a retinoic acid-metabolizing cytochrome that plays key roles in retinoic acid (RA) metabolism. It is the main all-trans-retinoic acid (atRA) hydroxylase that catalyzes the formation of several hydroxylated forms of RA, including 4-OH-RA, 4-oxo-RA and 18-OH-RA. RA is a critical signaling molecule that regulates gene transcription and the cell cycle. CYP26A1 has been shown to upregulate fascin and promote the malignant behavior of breast carcinoma cells. It belongs to the large cytochrome P450 (P450, CYP) superfamily of heme-containing proteins that catalyze a variety of oxidative reactions of a large number of structurally different endogenous and exogenous compounds in organisms from all major domains of life. CYPs bind their diverse ligands in a buried, hydrophobic active site, which is accessed through a substrate access channel formed by two flexible helices and their connecting loop.


Pssm-ID: 410731 [Multi-domain]  Cd Length: 432  Bit Score: 39.03  E-value: 5.09e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1005574924 215 DIISLLVQS--EADKNISGKEVVSFCKLLLVAGNETTTNLLGNLLYCLIENPDVYKQIQQDVSL---------------- 276
Cdd:cd20638   210 DALQLLIEHsrRNGEPLNLQALKESATELLFGGHETTASAATSLIMFLGLHPEVLQKVRKELQEkgllstkpnenkelsm 289
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1005574924 277 --------VPKAIEEVLRYRSPAQRIVRKVKKEIQIRGQtlqvdQIISGW-----IGSANRDSLHFKDADSFNIHR---- 339
Cdd:cd20638   290 evleqlkyTGCVIKETLRLSPPVPGGFRVALKTFELNGY-----QIPKGWnviysICDTHDVADIFPNKDEFNPDRfmsp 364
                         170       180       190       200       210       220       230
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1005574924 340 -----SRNPHLAFGHGIHFCLGAPLARLEAKIVLTEIMkkyKSFSFIDHNLPVPISSVSSVYGLKSLPVK 404
Cdd:cd20638   365 lpedsSRFSFIPFGGGSRSCVGKEFAKVLLKIFTVELA---RHCDWQLLNGPPTMKTSPTVYPVDNLPAK 431
CYP4B-like cd20678
cytochrome P450 family 4, subfamily B and similar cytochrome P450s, including subfamilies A, T, ...
217-392 6.38e-03

cytochrome P450 family 4, subfamily B and similar cytochrome P450s, including subfamilies A, T, X, and Z; This group is composed of family 4 cytochrome P450s from subfamilies A (CYP4A), B (CYP4B), T (CYP4T), X (CYP4X), and Z (CYP4Z). The CYP4A, CYP4X, and CYP4Z subfamilies are specific to mammals, CYP4T is present in fish, while CYP4B is conserved among vertebrates. CYP4As are known for catalyzing arachidonic acid to 20-HETE (20-hydroxy-5Z,8Z,11Z,14Z-eicosatetraenoic acid), and some can also metabolize lauric and palmitic acid. CYP4Bs specialize in omega-hydroxylation of short chain fatty acids and also participates in the metabolism of exogenous compounds that are protoxic including valproic acid (C8), 3-methylindole (C9), 4-ipomeanol, 3-methoxy-4-aminoazobenzene, and several aromatic amines. CYP4X1 is expressed at high levels in the mammalian brain and may play a role in regulating fat metabolism. CYP4Z1 is a fatty acid hydroxylase that is unique among human CYPs in that it is predominantly expressed in the mammary gland. Monophyly was not found with the CYP4T and CYP4B subfamilies, and further consideration should be given to their nomenclature. The CYP4B-like group belongs to the large cytochrome P450 (P450, CYP) superfamily of heme-containing proteins that catalyze a variety of oxidative reactions of a large number of structurally different endogenous and exogenous compounds in organisms from all major domains of life. CYPs bind their diverse ligands in a buried, hydrophobic active site, which is accessed through a substrate access channel formed by two flexible helices and their connecting loop.


Pssm-ID: 410771 [Multi-domain]  Cd Length: 436  Bit Score: 38.41  E-value: 6.38e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1005574924 217 ISLLVQSEADKNISGKEVVSFCKLLLVAGNETTTNLLGNLLYCLIENPD----VYKQIQQ-----------DVSLVP--- 278
Cdd:cd20678   223 ILLFAKDENGKSLSDEDLRAEVDTFMFEGHDTTASGISWILYCLALHPEhqqrCREEIREilgdgdsitweHLDQMPytt 302
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1005574924 279 KAIEEVLRYRSPAQRIVRKVKKEIQI-RGQTLQVDQIISGWIGSANRDSLHFKDADSFNIHR-------SRNPH--LAFG 348
Cdd:cd20678   303 MCIKEALRLYPPVPGISRELSKPVTFpDGRSLPAGITVSLSIYGLHHNPAVWPNPEVFDPLRfspenssKRHSHafLPFS 382
                         170       180       190       200
                  ....*....|....*....|....*....|....*....|....*
gi 1005574924 349 HGIHFCLGAPLARLEAKIVLTEIMKKYKSFSfiDH-NLPVPISSV 392
Cdd:cd20678   383 AGPRNCIGQQFAMNEMKVAVALTLLRFELLP--DPtRIPIPIPQL 425
PLN02500 PLN02500
cytochrome P450 90B1
228-389 7.54e-03

cytochrome P450 90B1


Pssm-ID: 215276 [Multi-domain]  Cd Length: 490  Bit Score: 38.31  E-value: 7.54e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1005574924 228 NISGKEVVSFCKLLLVAGNETTTNLLGNLLYCLIENPDVYKQIQQDVSLVPKA-----------------------IEEV 284
Cdd:PLN02500  274 NLSTEQILDLILSLLFAGHETSSVAIALAIFFLQGCPKAVQELREEHLEIARAkkqsgeselnwedykkmeftqcvINET 353
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1005574924 285 LRYRSPAQRIVRKVKKEIQIRGQtlqvdQIISGW-----IGSANRDSLHFKDADSFNIHR----------------SRNP 343
Cdd:PLN02500  354 LRLGNVVRFLHRKALKDVRYKGY-----DIPSGWkvlpvIAAVHLDSSLYDQPQLFNPWRwqqnnnrggssgsssaTTNN 428
                         170       180       190       200       210
                  ....*....|....*....|....*....|....*....|....*....|....*.
gi 1005574924 344 HLAFGHGIHFCLGAPLARLEAKIVLTEIMKKYK----------SFSFIDHNLPVPI 389
Cdd:PLN02500  429 FMPFGGGPRLCAGSELAKLEMAVFIHHLVLNFNwelaeadqafAFPFVDFPKGLPI 484
CYP58-like cd11062
cytochrome P450 family 58-like fungal cytochrome P450s; This group includes Fusarium ...
80-274 9.91e-03

cytochrome P450 family 58-like fungal cytochrome P450s; This group includes Fusarium sporotrichioides cytochrome P450 58 (CYP58, also known as Tri4 and trichodiene oxygenase), and similar fungal proteins. CYP58 catalyzes the oxygenation of trichodiene during the biosynthesis of trichothecenes, which are sesquiterpenoid toxins that act by inhibiting protein biosynthesis. The CYP58-like subfamily belongs to the large cytochrome P450 (P450, CYP) superfamily of heme-containing proteins that catalyze a variety of oxidative reactions of a large number of structurally different endogenous and exogenous compounds in organisms from all major domains of life. CYPs bind their diverse ligands in a buried, hydrophobic active site, which is accessed through a substrate access channel formed by two flexible helices and their connecting loop.


Pssm-ID: 410685 [Multi-domain]  Cd Length: 425  Bit Score: 38.00  E-value: 9.91e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1005574924  80 FPQSILGM-DPPKHTQIRSIVNRSFTPKSL---------KV--WESRIQQ----------------ITNDILIQLSNRDN 131
Cdd:cd11062    42 APGSTFSTvDHDLHRLRRKALSPFFSKRSIlrlepliqeKVdkLVSRLREakgtgepvnlddafraLTADVITEYAFGRS 121
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1005574924 132 FDIVQELFYPLPVIVIAEMLGVSV---NDMDRFKKWSDIIVSSPNHDDPDYLKEFFHIRlqaenelEEFFEEIIQINRGK 208
Cdd:cd11062   122 YGYLDEPDFGPEFLDALRALAEMIhllRHFPWLLKLLRSLPESLLKRLNPGLAVFLDFQ-------ESIAKQVDEVLRQV 194
                         170       180       190       200       210       220       230
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1005574924 209 SKKDSNDIISLLVQSEADKNISGKE-----VVSFCKLLLVAGNETTTNLLGNLLYCLIENPDVYKQIQQDV 274
Cdd:cd11062   195 SAGDPPSIVTSLFHALLNSDLPPSEktlerLADEAQTLIGAGTETTARTLSVATFHLLSNPEILERLREEL 265
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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