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Conserved domains on  [gi|1006542622|ref|WP_061793429|]
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DUF3055 domain-containing protein [Cytobacillus firmus]

Protein Classification

DUF3055 domain-containing protein( domain architecture ID 10567953)

uncharacterized DUF3055 domain-containing protein

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
DUF3055 pfam11256
Protein of unknown function (DUF3055); This family of proteins with unknown function appear to ...
 7-87 2.09e-37

Protein of unknown function (DUF3055); This family of proteins with unknown function appear to be restricted to Firmicutes.


:

Pssm-ID: 431763  Cd Length: 80  Bit Score: 120.38  E-value: 2.09e-37
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1006542622  7 LYDEHENVNVRFVGFTTESTRYDFGIVYTNLFFSKPLVICMQTGRSTLLDPKDLEDIEYLQKAFKLDLyEQAADLSEFFL 86
Cdd:pfam11256  1 LYDETEETKTRFVGFTGESQRFDLAIVYTNRFYGKPLVLCMQTGRSAIIGPDDLEEPGYLEHAFGLSE-EEAEELREFLY 79


                 .
gi 1006542622 87 E 87
Cdd:pfam11256 80 E 80
 
Name Accession Description Interval E-value
DUF3055 pfam11256
Protein of unknown function (DUF3055); This family of proteins with unknown function appear to ...
 7-87 2.09e-37

Protein of unknown function (DUF3055); This family of proteins with unknown function appear to be restricted to Firmicutes.


Pssm-ID: 431763  Cd Length: 80  Bit Score: 120.38  E-value: 2.09e-37
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1006542622  7 LYDEHENVNVRFVGFTTESTRYDFGIVYTNLFFSKPLVICMQTGRSTLLDPKDLEDIEYLQKAFKLDLyEQAADLSEFFL 86
Cdd:pfam11256  1 LYDETEETKTRFVGFTGESQRFDLAIVYTNRFYGKPLVLCMQTGRSAIIGPDDLEEPGYLEHAFGLSE-EEAEELREFLY 79


                 .
gi 1006542622 87 E 87
Cdd:pfam11256 80 E 80
 
Name Accession Description Interval E-value
DUF3055 pfam11256
Protein of unknown function (DUF3055); This family of proteins with unknown function appear to ...
 7-87 2.09e-37

Protein of unknown function (DUF3055); This family of proteins with unknown function appear to be restricted to Firmicutes.


Pssm-ID: 431763  Cd Length: 80  Bit Score: 120.38  E-value: 2.09e-37
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1006542622  7 LYDEHENVNVRFVGFTTESTRYDFGIVYTNLFFSKPLVICMQTGRSTLLDPKDLEDIEYLQKAFKLDLyEQAADLSEFFL 86
Cdd:pfam11256  1 LYDETEETKTRFVGFTGESQRFDLAIVYTNRFYGKPLVLCMQTGRSAIIGPDDLEEPGYLEHAFGLSE-EEAEELREFLY 79


                 .
gi 1006542622 87 E 87
Cdd:pfam11256 80 E 80
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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