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Conserved domains on  [gi|1011229079|ref|WP_062148227|]
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slr1659 superfamily regulator [Beggiatoa leptomitoformis]

Protein Classification

STAS domain-containing protein; SLC26/SulP family anion transporter( domain architecture ID 10009298)

STAS (Sulphate Transporter and AntiSigma factor antagonist) domain-containing protein similar to Lysinibacillus sphaericus anti-sigma-B factor antagonist, SpoIIAA| SLC26 (solute carrier 26)/SulP family anion transporter mediates the transport of anions such as bicarbonate, chloride, sulfate and/or oxalate; similar to Homo sapiens solute carrier family 26 member 10P

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
STAS COG5439
STAS domain [General function prediction only];
1-114 1.71e-58

STAS domain [General function prediction only];


:

Pssm-ID: 444190  Cd Length: 114  Bit Score: 175.44  E-value: 1.71e-58
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1011229079   1 MQIKTDDYDIAFDTVTNVITCKGSLLLSGSDEYAPLLDLMNNATEQPIEMLTLDVRALEFLNSSGINTMTKFVINVRNKK 80
Cdd:COG5439     1 MEIKTEDYRVWYDPATSTVTFQGSLRLNGMDEYAPILSLLNEVAESEPPTLTLDLRELEFLNSSGINMLSKFVIEVRKKK 80

                          90       100       110
                  ....*....|....*....|....*....|....
gi 1011229079  81 SLQLTVVGYEQVPWQVRLLKNLQRLMPTLVLQLE 114
Cdd:COG5439    81 DVQLVVLGSKNIPWQGKSLKNLKRLMPSLQLELE 114
 
Name Accession Description Interval E-value
STAS COG5439
STAS domain [General function prediction only];
1-114 1.71e-58

STAS domain [General function prediction only];


Pssm-ID: 444190  Cd Length: 114  Bit Score: 175.44  E-value: 1.71e-58
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1011229079   1 MQIKTDDYDIAFDTVTNVITCKGSLLLSGSDEYAPLLDLMNNATEQPIEMLTLDVRALEFLNSSGINTMTKFVINVRNKK 80
Cdd:COG5439     1 MEIKTEDYRVWYDPATSTVTFQGSLRLNGMDEYAPILSLLNEVAESEPPTLTLDLRELEFLNSSGINMLSKFVIEVRKKK 80

                          90       100       110
                  ....*....|....*....|....*....|....
gi 1011229079  81 SLQLTVVGYEQVPWQVRLLKNLQRLMPTLVLQLE 114
Cdd:COG5439    81 DVQLVVLGSKNIPWQGKSLKNLKRLMPSLQLELE 114
 
Name Accession Description Interval E-value
STAS COG5439
STAS domain [General function prediction only];
1-114 1.71e-58

STAS domain [General function prediction only];


Pssm-ID: 444190  Cd Length: 114  Bit Score: 175.44  E-value: 1.71e-58
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1011229079   1 MQIKTDDYDIAFDTVTNVITCKGSLLLSGSDEYAPLLDLMNNATEQPIEMLTLDVRALEFLNSSGINTMTKFVINVRNKK 80
Cdd:COG5439     1 MEIKTEDYRVWYDPATSTVTFQGSLRLNGMDEYAPILSLLNEVAESEPPTLTLDLRELEFLNSSGINMLSKFVIEVRKKK 80

                          90       100       110
                  ....*....|....*....|....*....|....
gi 1011229079  81 SLQLTVVGYEQVPWQVRLLKNLQRLMPTLVLQLE 114
Cdd:COG5439    81 DVQLVVLGSKNIPWQGKSLKNLKRLMPSLQLELE 114
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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