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Conserved domains on  [gi|1011507018|ref|WP_062401502|]
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ATP synthase F1 subunit gamma [Veillonella sp. DNF00869]

Protein Classification

F0F1 ATP synthase subunit gamma( domain architecture ID 10000722)

F0F1 ATP synthase subunit gamma is part of the catalytic core of the F-type ATPase that produces ATP from ADP in the presence of a proton gradient across the membrane

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
AtpG COG0224
FoF1-type ATP synthase, gamma subunit [Energy production and conversion]; FoF1-type ATP ...
 1-283 1.90e-135

FoF1-type ATP synthase, gamma subunit [Energy production and conversion]; FoF1-type ATP synthase, gamma subunit is part of the Pathway/BioSystem: FoF1-type ATP synthase


:

Pssm-ID: 439994  Cd Length: 288  Bit Score: 384.11  E-value: 1.90e-135
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1011507018   1 MSSAQDLRKRIKSVTNTQQITKAMKMVASARLRRAQQKAKGTEPYTERLRHMLhQSMSSLDGGADLPLLTVRPVNKVAYV 80
Cdd:COG0224     1 MASLKEIRRRIKSVKSTQKITKAMKMVAASKLRKAQERAEAARPYAEKLREVL-AALAAASPEYDHPLLEEREVKRVGLI 79

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1011507018  81 VVGADKGLAGAYTSNIIKYVQSLLKDTPTDA--YGLFTVGRKPTEYFRGHGYSVVSELQGFSDKPGFHHAQDIVEQVKTM 158
Cdd:COG0224    80 VITSDRGLCGGFNSNVLKAAEELIKELQAEGkeVELIVVGRKGRDFFKRRGINVVAEFTGLSDKPSFEDAKEIAEELLDA 159

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1011507018 159 FLSGEVDEVVLVYTKFVNSLLQEVTHERLLPLSLESDTAEAGES----LFYPDQGSVLEQLLPAYVESTVYNALLHGAAS 234
Cdd:COG0224   160 FLAGEIDEVYLVYNRFVSAITQEPVVEQLLPLDPEELEEAEWETradyIFEPSPEEILDALLPRYLESQIYQALLESAAS 239

                         250       260       270       280
                  ....*....|....*....|....*....|....*....|....*....
gi 1011507018 235 ELGARMTAMTSATDNAGELIGTLHLEYNKLRQAGITNEISEIVGGANAL 283
Cdd:COG0224   240 EHAARMTAMKNATDNAGELIDDLTLEYNRARQAAITQELSEIVGGAEAL 288
 
Name Accession Description Interval E-value
AtpG COG0224
FoF1-type ATP synthase, gamma subunit [Energy production and conversion]; FoF1-type ATP ...
 1-283 1.90e-135

FoF1-type ATP synthase, gamma subunit [Energy production and conversion]; FoF1-type ATP synthase, gamma subunit is part of the Pathway/BioSystem: FoF1-type ATP synthase


Pssm-ID: 439994  Cd Length: 288  Bit Score: 384.11  E-value: 1.90e-135
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1011507018   1 MSSAQDLRKRIKSVTNTQQITKAMKMVASARLRRAQQKAKGTEPYTERLRHMLhQSMSSLDGGADLPLLTVRPVNKVAYV 80
Cdd:COG0224     1 MASLKEIRRRIKSVKSTQKITKAMKMVAASKLRKAQERAEAARPYAEKLREVL-AALAAASPEYDHPLLEEREVKRVGLI 79

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1011507018  81 VVGADKGLAGAYTSNIIKYVQSLLKDTPTDA--YGLFTVGRKPTEYFRGHGYSVVSELQGFSDKPGFHHAQDIVEQVKTM 158
Cdd:COG0224    80 VITSDRGLCGGFNSNVLKAAEELIKELQAEGkeVELIVVGRKGRDFFKRRGINVVAEFTGLSDKPSFEDAKEIAEELLDA 159

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1011507018 159 FLSGEVDEVVLVYTKFVNSLLQEVTHERLLPLSLESDTAEAGES----LFYPDQGSVLEQLLPAYVESTVYNALLHGAAS 234
Cdd:COG0224   160 FLAGEIDEVYLVYNRFVSAITQEPVVEQLLPLDPEELEEAEWETradyIFEPSPEEILDALLPRYLESQIYQALLESAAS 239

                         250       260       270       280
                  ....*....|....*....|....*....|....*....|....*....
gi 1011507018 235 ELGARMTAMTSATDNAGELIGTLHLEYNKLRQAGITNEISEIVGGANAL 283
Cdd:COG0224   240 EHAARMTAMKNATDNAGELIDDLTLEYNRARQAAITQELSEIVGGAEAL 288
PRK05621 PRK05621
F0F1 ATP synthase subunit gamma; Validated
 1-283 8.29e-128

F0F1 ATP synthase subunit gamma; Validated


Pssm-ID: 235535  Cd Length: 284  Bit Score: 364.82  E-value: 8.29e-128
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1011507018   1 MSSAQDLRKRIKSVTNTQQITKAMKMVASARLRRAQQKAKGTEPYTERLRHMLHQSMSSLDGgaDLPLLTVRPVNKVAYV 80
Cdd:PRK05621    1 MASLKEIRRRIKSVKNTQKITKAMEMVAASKLRKAQERAEASRPYAEKIRKVISHLASASEY--DHPLLVEREVKRVGYI 78

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1011507018  81 VVGADKGLAGAYTSNIIKYVQSLLKDTPTDA--YGLFTVGRKPTEYFRGHGYSVVSELQGFSDKPGFHHAQDIVEQVKTM 158
Cdd:PRK05621   79 VVTSDRGLCGGYNSNIIKKVLELIKELEAQGkeVKLIVIGRKGVDFFKRRGINVVAEYTGLGDQPTFEEAIGIAKKLLDA 158

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1011507018 159 FLSGEVDEVVLVYTKFVNSLLQEVTHERLLPLSLESDTAEAGESLFY-PDQGSVLEQLLPAYVESTVYNALLHGAASELG 237
Cdd:PRK05621  159 YDNGEFDELYIVYNKFVNTLSQEPTVEQLLPLEKEEEEEETSWDYEYePDAEEILDALLPRYVESQIYQALLENKASEQA 238

                         250       260       270       280
                  ....*....|....*....|....*....|....*....|....*.
gi 1011507018 238 ARMTAMTSATDNAGELIGTLHLEYNKLRQAGITNEISEIVGGANAL 283
Cdd:PRK05621  239 ARMTAMKNATDNAGDLIKKLTLVYNRARQAAITQEITEIVGGAEAL 284
ATP-synt pfam00231
ATP synthase;
3-282 9.18e-126

ATP synthase;


Pssm-ID: 459722  Cd Length: 285  Bit Score: 359.53  E-value: 9.18e-126
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1011507018   3 SAQDLRKRIKSVTNTQQITKAMKMVASARLRRAQQKAKGTEPYTERLRHMLhQSMSSLDGGADLPLLTVRPVNKVAYVVV 82
Cdd:pfam00231   1 SLKEIKRRIKSVKSTQKITKAMKMVAAAKLRKAQEALEAARPYAEKLQEVL-ADLAAASPEDSHPLLERREVKKVGLIVI 79

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1011507018  83 GADKGLAGAYTSNIIKYVQSLLKDTP--TDAYGLFTVGRKPTEYFRGHGYSVVSELQG-FSDKPGFHHAQDIVEQVKTMF 159
Cdd:pfam00231  80 TSDRGLCGGFNSNVIKAARALIEELLaeGKEVKLIVVGRKGRDYFKKRGYEVILEFTGsLGDKPTFEEAAEIADELLDAF 159

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1011507018 160 LSGEVDEVVLVYTKFVNSLLQEVTHERLLPLSLESDTAEAGES---LFYPDQGSVLEQLLPAYVESTVYNALLHGAASEL 236
Cdd:pfam00231 160 LAGEIDEVYLVYNRFVSAISQEPTVEQLLPLDPEEEEEEEESLadyEFEPSAEEVLDALLPRYLESQIYGALLESAASEQ 239

                         250       260       270       280
                  ....*....|....*....|....*....|....*....|....*.
gi 1011507018 237 GARMTAMTSATDNAGELIGTLHLEYNKLRQAGITNEISEIVGGANA 282
Cdd:pfam00231 240 AARMTAMDNATDNAGELIDKLTLQYNRARQAAITQELIEIVSGAEA 285
F1-ATPase_gamma cd12151
mitochondrial ATP synthase gamma subunit; The F-ATPase is found in bacterial plasma membranes, ...
 3-280 9.32e-119

mitochondrial ATP synthase gamma subunit; The F-ATPase is found in bacterial plasma membranes, mitochondrial inner membranes and in chloroplast thylakoid membranes. It has also been found in the archaea Methanosarcina barkeri. It uses a proton gradient to drive ATP synthesis and hydrolyzes ATP to build the proton gradient. The extrinisic membrane domain of F-ATPases is composed of alpha, beta, gamma, delta, and epsilon (not present in bacteria) subunits with a stoichiometry of 3:3:1:1:1. Alpha and beta subunit form the globular catalytic moiety, a hexameric ring of alternating subunits. Gamma, delta and epsilon subunits form a stalk, connecting F1 to F0, the integral membrane proton translocating domain.


Pssm-ID: 213394  Cd Length: 282  Bit Score: 341.48  E-value: 9.32e-119
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1011507018   3 SAQDLRKRIKSVTNTQQITKAMKMVASARLRRAQQKAKGTEPYTERLRHMLhQSMSSLDGGADLPLLTVRPVNKVAYVVV 82
Cdd:cd12151     2 SLKEIKRRIKSVKNTQKITKAMKMVAAAKLRKAQRALEAARPYAEKLEEVL-QRLLSSLDDEDPPLLEKREVKKVLLIVI 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1011507018  83 GADKGLAGAYTSNIIKYVQSLLKDTPTDAYGLFTVGRKPTEYFRGHGYSVVSELQGFSDKPGFHHAQDIVEQVKTMFLSG 162
Cdd:cd12151    81 TSDRGLCGGFNSNIIKAAEELIKEADGKEVKLIVVGKKGRDYLKRRGYNIALPFSDIGDDPTYFEAASIIEELILDFLNG 160

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1011507018 163 EVDEVVLVYTKFVNSLLQEVTHERLLPLSLESDTAEAGES----LFYPDQGSVLEQLLPAYVESTVYNALLHGAASELGA 238
Cdd:cd12151   161 EIDEVYIIYNKFKSAISQEPVVEQLLPLDKEEEEEESEGSrsdyIFEPDPEEVLDALLPFYLASLLYRALLESLASEQAA 240

                         250       260       270       280
                  ....*....|....*....|....*....|....*....|..
gi 1011507018 239 RMTAMTSATDNAGELIGTLHLEYNKLRQAGITNEISEIVGGA 280
Cdd:cd12151   241 RMTAMDNATDNAGELIDKLTLEYNRARQAAITQELIEIVSGA 282
ATPsyn_F1gamma TIGR01146
ATP synthase, F1 gamma subunit; This model describes the ATP synthase gamma subunit in ...
 2-283 1.09e-111

ATP synthase, F1 gamma subunit; This model describes the ATP synthase gamma subunit in bacteria and its equivalents in organelles, namely, mitochondria and chloroplast. F1/F0-ATP synthase is a multisubunit, membrane associated enzyme found in bacteria and organelles of higher eukaryotes, namely, mitochondria and chloroplast. This enzyme is principally involed in the synthesis of ATP from ADP and inorganic phosphate by coupling the energy derived from the proton electrochemical gradient across the biological membrane. A brief description of this multisubunit enzyme complex: F1 and F0 represent two major clusters of subunits. The gamma subunit is the part of F1 cluster. Surrounding the gamma subunit in a cylinder-like structure are three alpha and three subunits in an alternating fashion. This is the central catalytic unit whose different conformations permit the binding of ADP and inorganic phosphate and release of ATP. [Energy metabolism, ATP-proton motive force interconversion]


Pssm-ID: 273469  Cd Length: 286  Bit Score: 323.86  E-value: 1.09e-111
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1011507018   2 SSAQDLRKRIKSVTNTQQITKAMKMVASARLRRAQQKAKGTEPYTERLRHMLHQSMSSLdGGADLPLLTVRPVNKVAYVV 81
Cdd:TIGR01146   1 ATLKEIRTRIKSVKNTQKITKAMKMVAASKLRRAQERAEAARPYAEKIRAVLGNLATKL-LNVDHPLLKSREVKKVGILV 79

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1011507018  82 VGADKGLAGAYTSNIIKYVQSLLKDTPT--DAYGLFTVGRKPTEYFRGHGYSVVSELQGFSDKPGFHHAQDIVEQVKTMF 159
Cdd:TIGR01146  80 ITSDRGLCGGYNSNVLKRVRARAKELKAagKEVKLVVIGRKGKSFFKRRGDNIVLSITGLSDQPTFEEASGIADKLLDAF 159

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1011507018 160 LSGEVDEVVLVYTKFVNSLLQEVTHERLLPLS---LESDTAEAGESLFYPDQGSVLEQLLPAYVESTVYNALLHGAASEL 236
Cdd:TIGR01146 160 DAGEFDELYIVYNKFVSSISQEPTVKQLLPLSaqgPDEGFKFSQDYIFEPDEEEILDDLLPRYLESQIYGALLESAASEQ 239

                         250       260       270       280
                  ....*....|....*....|....*....|....*....|....*..
gi 1011507018 237 GARMTAMTSATDNAGELIGTLHLEYNKLRQAGITNEISEIVGGANAL 283
Cdd:TIGR01146 240 AARMTAMDNATDNAGDLIKKLTLSYNRARQAAITQELIEIVAGASAL 286
 
Name Accession Description Interval E-value
AtpG COG0224
FoF1-type ATP synthase, gamma subunit [Energy production and conversion]; FoF1-type ATP ...
 1-283 1.90e-135

FoF1-type ATP synthase, gamma subunit [Energy production and conversion]; FoF1-type ATP synthase, gamma subunit is part of the Pathway/BioSystem: FoF1-type ATP synthase


Pssm-ID: 439994  Cd Length: 288  Bit Score: 384.11  E-value: 1.90e-135
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1011507018   1 MSSAQDLRKRIKSVTNTQQITKAMKMVASARLRRAQQKAKGTEPYTERLRHMLhQSMSSLDGGADLPLLTVRPVNKVAYV 80
Cdd:COG0224     1 MASLKEIRRRIKSVKSTQKITKAMKMVAASKLRKAQERAEAARPYAEKLREVL-AALAAASPEYDHPLLEEREVKRVGLI 79

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1011507018  81 VVGADKGLAGAYTSNIIKYVQSLLKDTPTDA--YGLFTVGRKPTEYFRGHGYSVVSELQGFSDKPGFHHAQDIVEQVKTM 158
Cdd:COG0224    80 VITSDRGLCGGFNSNVLKAAEELIKELQAEGkeVELIVVGRKGRDFFKRRGINVVAEFTGLSDKPSFEDAKEIAEELLDA 159

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1011507018 159 FLSGEVDEVVLVYTKFVNSLLQEVTHERLLPLSLESDTAEAGES----LFYPDQGSVLEQLLPAYVESTVYNALLHGAAS 234
Cdd:COG0224   160 FLAGEIDEVYLVYNRFVSAITQEPVVEQLLPLDPEELEEAEWETradyIFEPSPEEILDALLPRYLESQIYQALLESAAS 239

                         250       260       270       280
                  ....*....|....*....|....*....|....*....|....*....
gi 1011507018 235 ELGARMTAMTSATDNAGELIGTLHLEYNKLRQAGITNEISEIVGGANAL 283
Cdd:COG0224   240 EHAARMTAMKNATDNAGELIDDLTLEYNRARQAAITQELSEIVGGAEAL 288
PRK05621 PRK05621
F0F1 ATP synthase subunit gamma; Validated
 1-283 8.29e-128

F0F1 ATP synthase subunit gamma; Validated


Pssm-ID: 235535  Cd Length: 284  Bit Score: 364.82  E-value: 8.29e-128
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1011507018   1 MSSAQDLRKRIKSVTNTQQITKAMKMVASARLRRAQQKAKGTEPYTERLRHMLHQSMSSLDGgaDLPLLTVRPVNKVAYV 80
Cdd:PRK05621    1 MASLKEIRRRIKSVKNTQKITKAMEMVAASKLRKAQERAEASRPYAEKIRKVISHLASASEY--DHPLLVEREVKRVGYI 78

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1011507018  81 VVGADKGLAGAYTSNIIKYVQSLLKDTPTDA--YGLFTVGRKPTEYFRGHGYSVVSELQGFSDKPGFHHAQDIVEQVKTM 158
Cdd:PRK05621   79 VVTSDRGLCGGYNSNIIKKVLELIKELEAQGkeVKLIVIGRKGVDFFKRRGINVVAEYTGLGDQPTFEEAIGIAKKLLDA 158

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1011507018 159 FLSGEVDEVVLVYTKFVNSLLQEVTHERLLPLSLESDTAEAGESLFY-PDQGSVLEQLLPAYVESTVYNALLHGAASELG 237
Cdd:PRK05621  159 YDNGEFDELYIVYNKFVNTLSQEPTVEQLLPLEKEEEEEETSWDYEYePDAEEILDALLPRYVESQIYQALLENKASEQA 238

                         250       260       270       280
                  ....*....|....*....|....*....|....*....|....*.
gi 1011507018 238 ARMTAMTSATDNAGELIGTLHLEYNKLRQAGITNEISEIVGGANAL 283
Cdd:PRK05621  239 ARMTAMKNATDNAGDLIKKLTLVYNRARQAAITQEITEIVGGAEAL 284
ATP-synt pfam00231
ATP synthase;
3-282 9.18e-126

ATP synthase;


Pssm-ID: 459722  Cd Length: 285  Bit Score: 359.53  E-value: 9.18e-126
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1011507018   3 SAQDLRKRIKSVTNTQQITKAMKMVASARLRRAQQKAKGTEPYTERLRHMLhQSMSSLDGGADLPLLTVRPVNKVAYVVV 82
Cdd:pfam00231   1 SLKEIKRRIKSVKSTQKITKAMKMVAAAKLRKAQEALEAARPYAEKLQEVL-ADLAAASPEDSHPLLERREVKKVGLIVI 79

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1011507018  83 GADKGLAGAYTSNIIKYVQSLLKDTP--TDAYGLFTVGRKPTEYFRGHGYSVVSELQG-FSDKPGFHHAQDIVEQVKTMF 159
Cdd:pfam00231  80 TSDRGLCGGFNSNVIKAARALIEELLaeGKEVKLIVVGRKGRDYFKKRGYEVILEFTGsLGDKPTFEEAAEIADELLDAF 159

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1011507018 160 LSGEVDEVVLVYTKFVNSLLQEVTHERLLPLSLESDTAEAGES---LFYPDQGSVLEQLLPAYVESTVYNALLHGAASEL 236
Cdd:pfam00231 160 LAGEIDEVYLVYNRFVSAISQEPTVEQLLPLDPEEEEEEEESLadyEFEPSAEEVLDALLPRYLESQIYGALLESAASEQ 239

                         250       260       270       280
                  ....*....|....*....|....*....|....*....|....*.
gi 1011507018 237 GARMTAMTSATDNAGELIGTLHLEYNKLRQAGITNEISEIVGGANA 282
Cdd:pfam00231 240 AARMTAMDNATDNAGELIDKLTLQYNRARQAAITQELIEIVSGAEA 285
F1-ATPase_gamma cd12151
mitochondrial ATP synthase gamma subunit; The F-ATPase is found in bacterial plasma membranes, ...
 3-280 9.32e-119

mitochondrial ATP synthase gamma subunit; The F-ATPase is found in bacterial plasma membranes, mitochondrial inner membranes and in chloroplast thylakoid membranes. It has also been found in the archaea Methanosarcina barkeri. It uses a proton gradient to drive ATP synthesis and hydrolyzes ATP to build the proton gradient. The extrinisic membrane domain of F-ATPases is composed of alpha, beta, gamma, delta, and epsilon (not present in bacteria) subunits with a stoichiometry of 3:3:1:1:1. Alpha and beta subunit form the globular catalytic moiety, a hexameric ring of alternating subunits. Gamma, delta and epsilon subunits form a stalk, connecting F1 to F0, the integral membrane proton translocating domain.


Pssm-ID: 213394  Cd Length: 282  Bit Score: 341.48  E-value: 9.32e-119
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1011507018   3 SAQDLRKRIKSVTNTQQITKAMKMVASARLRRAQQKAKGTEPYTERLRHMLhQSMSSLDGGADLPLLTVRPVNKVAYVVV 82
Cdd:cd12151     2 SLKEIKRRIKSVKNTQKITKAMKMVAAAKLRKAQRALEAARPYAEKLEEVL-QRLLSSLDDEDPPLLEKREVKKVLLIVI 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1011507018  83 GADKGLAGAYTSNIIKYVQSLLKDTPTDAYGLFTVGRKPTEYFRGHGYSVVSELQGFSDKPGFHHAQDIVEQVKTMFLSG 162
Cdd:cd12151    81 TSDRGLCGGFNSNIIKAAEELIKEADGKEVKLIVVGKKGRDYLKRRGYNIALPFSDIGDDPTYFEAASIIEELILDFLNG 160

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1011507018 163 EVDEVVLVYTKFVNSLLQEVTHERLLPLSLESDTAEAGES----LFYPDQGSVLEQLLPAYVESTVYNALLHGAASELGA 238
Cdd:cd12151   161 EIDEVYIIYNKFKSAISQEPVVEQLLPLDKEEEEEESEGSrsdyIFEPDPEEVLDALLPFYLASLLYRALLESLASEQAA 240

                         250       260       270       280
                  ....*....|....*....|....*....|....*....|..
gi 1011507018 239 RMTAMTSATDNAGELIGTLHLEYNKLRQAGITNEISEIVGGA 280
Cdd:cd12151   241 RMTAMDNATDNAGELIDKLTLEYNRARQAAITQELIEIVSGA 282
ATPsyn_F1gamma TIGR01146
ATP synthase, F1 gamma subunit; This model describes the ATP synthase gamma subunit in ...
 2-283 1.09e-111

ATP synthase, F1 gamma subunit; This model describes the ATP synthase gamma subunit in bacteria and its equivalents in organelles, namely, mitochondria and chloroplast. F1/F0-ATP synthase is a multisubunit, membrane associated enzyme found in bacteria and organelles of higher eukaryotes, namely, mitochondria and chloroplast. This enzyme is principally involed in the synthesis of ATP from ADP and inorganic phosphate by coupling the energy derived from the proton electrochemical gradient across the biological membrane. A brief description of this multisubunit enzyme complex: F1 and F0 represent two major clusters of subunits. The gamma subunit is the part of F1 cluster. Surrounding the gamma subunit in a cylinder-like structure are three alpha and three subunits in an alternating fashion. This is the central catalytic unit whose different conformations permit the binding of ADP and inorganic phosphate and release of ATP. [Energy metabolism, ATP-proton motive force interconversion]


Pssm-ID: 273469  Cd Length: 286  Bit Score: 323.86  E-value: 1.09e-111
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1011507018   2 SSAQDLRKRIKSVTNTQQITKAMKMVASARLRRAQQKAKGTEPYTERLRHMLHQSMSSLdGGADLPLLTVRPVNKVAYVV 81
Cdd:TIGR01146   1 ATLKEIRTRIKSVKNTQKITKAMKMVAASKLRRAQERAEAARPYAEKIRAVLGNLATKL-LNVDHPLLKSREVKKVGILV 79

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1011507018  82 VGADKGLAGAYTSNIIKYVQSLLKDTPT--DAYGLFTVGRKPTEYFRGHGYSVVSELQGFSDKPGFHHAQDIVEQVKTMF 159
Cdd:TIGR01146  80 ITSDRGLCGGYNSNVLKRVRARAKELKAagKEVKLVVIGRKGKSFFKRRGDNIVLSITGLSDQPTFEEASGIADKLLDAF 159

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1011507018 160 LSGEVDEVVLVYTKFVNSLLQEVTHERLLPLS---LESDTAEAGESLFYPDQGSVLEQLLPAYVESTVYNALLHGAASEL 236
Cdd:TIGR01146 160 DAGEFDELYIVYNKFVSSISQEPTVKQLLPLSaqgPDEGFKFSQDYIFEPDEEEILDDLLPRYLESQIYGALLESAASEQ 239

                         250       260       270       280
                  ....*....|....*....|....*....|....*....|....*..
gi 1011507018 237 GARMTAMTSATDNAGELIGTLHLEYNKLRQAGITNEISEIVGGANAL 283
Cdd:TIGR01146 240 AARMTAMDNATDNAGDLIKKLTLSYNRARQAAITQELIEIVAGASAL 286
PRK13423 PRK13423
F0F1 ATP synthase subunit gamma; Provisional
 1-284 3.48e-92

F0F1 ATP synthase subunit gamma; Provisional


Pssm-ID: 237384  Cd Length: 288  Bit Score: 274.63  E-value: 3.48e-92
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1011507018   1 MSSAQDLRKRIKSVTNTQQITKAMKMVASARLRRAQQKAKGTEPYTERLRHMLhQSMSSLDGGADLPLLTVRPVNKVAYV 80
Cdd:PRK13423    1 MASLKDIKKRIVSVKNTRQITKAMKMVSAAKLRRAQENVVAARPYAAKLGEVL-GSLAARAGEDAHPLLVPREVKKALLV 79

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1011507018  81 VVGADKGLAGAYTSNIIKYVQSLLKDTPT--DAYGLFTVGRKPTEYFRGHGYSVVSELQGFSDKPGFHHAQDIVEQVKTM 158
Cdd:PRK13423   80 VVTSDRGLCGGFNSNLCKAAERFLKENKDefEEISLTTVGRKGREFLKNRGLIIRKNYGGVVANLTYETAALLAQELIEG 159

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1011507018 159 FLSGEVDEVVLVYTKFVNSLLQEVTHERLLPL--SLESDTAEAGESLFYPDQGSVLEQLLPAYVESTVYNALLHGAASEL 236
Cdd:PRK13423  160 YLAGEYDEVYLVYNEFKSVMSQDITVQQLLPIdpPEAADDEYLPEYIYEPSRDALLAELLPKHVEVQIYRALLESVASEH 239

                         250       260       270       280
                  ....*....|....*....|....*....|....*....|....*...
gi 1011507018 237 GARMTAMTSATDNAGELIGTLHLEYNKLRQAGITNEISEIVGGANALQ 284
Cdd:PRK13423  240 GARMTAMDSATKNATEMIGKLTLQYNRARQAAITTELMEIVSGAEALK 287
PRK14111 PRK14111
F0F1 ATP synthase subunit gamma; Provisional
 1-283 6.17e-83

F0F1 ATP synthase subunit gamma; Provisional


Pssm-ID: 184515  Cd Length: 290  Bit Score: 250.87  E-value: 6.17e-83
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1011507018   1 MSSAQDLRKRIKSVTNTQQITKAMKMVASARLRRAQQKAKGTEPYTERLRHMLHQSMSSLDGGAD-LPLLTVRP-VNKVA 78
Cdd:PRK14111    1 MPSTREIRRRIRSVKNTAQITRAMEMVSASKMRRAQRNVLATRPYADRIRDVMGDLTARTVGAARvGPLLEKRPtVKRVA 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1011507018  79 YVVVGADKGLAGAYTSNIIKYVQSLLKD--TPTDAYGLFTVGRKPTEYFRGHGYSVVSELQGFSDKPGFHHAQDIVEQVK 156
Cdd:PRK14111   81 LILVTPDRGLAGSLNANVLRRAIRFITDerSMGRTVDVIAIGRKGRDFMVRTGQALVAEFTRLGDAPKLEAILPVATSAI 160

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1011507018 157 TMFLSGEVDEVVLVYTKFVNSLLQEVTHERLLPL-SLESDTAEAGESLFYPDQGSVLEQLLPAYVESTVYNALLHGAASE 235
Cdd:PRK14111  161 NGFQSGKYDEVYVLYSEFINTLVQRPTIKQLLPIePPEISTTTVVDYTYEPSPEEVLRALLPRFVEVQLYQAVLESIASE 240

                         250       260       270       280
                  ....*....|....*....|....*....|....*....|....*...
gi 1011507018 236 LGARMTAMTSATDNAGELIGTLHLEYNKLRQAGITNEISEIVGGANAL 283
Cdd:PRK14111  241 HSARMVAMRNATDNAKELVRDLTLTYNKARQAAITKEVSEIASGAAAL 288
PRK13425 PRK13425
F0F1 ATP synthase subunit gamma; Provisional
 1-284 2.83e-81

F0F1 ATP synthase subunit gamma; Provisional


Pssm-ID: 139564  Cd Length: 291  Bit Score: 246.65  E-value: 2.83e-81
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1011507018   1 MSSAQDLRKRIKSVTNTQQITKAMKMVASARLRRAQQKAKGTEPYTERLRHMLhqsmSSLDGGADL---PLLTVRP-VNK 76
Cdd:PRK13425    1 MPTLKDIRVRIKGVKSTQQVTKAMKMVAAAKLRRAQERAIMARPYAAKLKEML----GSLSAKVDTslnPLLSPRSeVNK 76

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1011507018  77 VAYVVVGADKGLAGAYTSNIIKYVQSLLKDTPTDAYG-----LFTVGRKPTEYFRGHGYSVVSELQGFSDKPGFHHAQDI 151
Cdd:PRK13425   77 VLVILITSDRGLCGAFNTNIIKLAQKVIHEDYAALHAkggvsMICAGTRGFDFFRKRGYNIVKGYPGVFQNLDFSVAKEI 156

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1011507018 152 VEQVKTMFLSGEVDEVVLVYTKFVNSLLQEVTHERLLPLSLE-SDTAEAGESLFYPDQGSVLEQLLPAYVESTVYNALLH 230
Cdd:PRK13425  157 AETASGMYLRGEVDKVVVVYNEFKSVLAPNLKSEVLLPITPEkPGAEGGSDYIYEPSPAAIIDELVPKHLNTQVWRMMLE 236

                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|....
gi 1011507018 231 GAASELGARMTAMTSATDNAGELIGTLHLEYNKLRQAGITNEISEIVGGANALQ 284
Cdd:PRK13425  237 SNAAEQAARMTAMDSATENAKELLRTLNISYNRARQAAITKELSEIVAGADALQ 290
PRK13426 PRK13426
F0F1 ATP synthase subunit gamma; Provisional
 1-283 2.57e-72

F0F1 ATP synthase subunit gamma; Provisional


Pssm-ID: 237385  Cd Length: 291  Bit Score: 223.89  E-value: 2.57e-72
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1011507018   1 MSSAQDLRKRIKSVTNTQQITKAMKMVASARLRRAQQKAKGTEPYTERLRHMLHQSMSSlDGGADLPLLTVRPVNKVAYV 80
Cdd:PRK13426    1 MASLKEIKTRIASVQSTRKITSAMKMVASAKLHKAQGAIENMLPYQRKLNHILTNFLSA-DLDVESPFTVERPVKRVAIV 79

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1011507018  81 VVGADKGLAGAYTSNIIKYVQSLLKDTPT---DAYGLFTVGRKPTEYFRGHGYSVVSELQGFSDKPGFHHAQDIVEQVKT 157
Cdd:PRK13426   80 VFSSNTSLCGGFNANIIKLLLQTIGEYRTlgqDNILIYPVGKKIEEAVKKLGFKVQGDYQTLADKPSYEEAAALAMRLME 159

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1011507018 158 MFLSGEVDEVVLVYTKFVNSLLQEVTHERLLPLSLESDTAE------AGESLFYPDQGSVLEQLLPAYVESTVYNALLHG 231
Cdd:PRK13426  160 LFLEGEIDKVELIYHHFKSMGVQVLTRETYLPIDLSQEKNAehaggvANDYIIEPSADTVLNDLIPKLLSLKIYTALLDS 239

                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|..
gi 1011507018 232 AASELGARMTAMTSATDNAGELIGTLHLEYNKLRQAGITNEISEIVGGANAL 283
Cdd:PRK13426  240 NASEHAARMVAMQIATDNANELLQELTLQYNKSRQQAITNELLDIVGGSMAN 291
PRK13427 PRK13427
F0F1 ATP synthase subunit gamma; Provisional
 1-284 6.02e-67

F0F1 ATP synthase subunit gamma; Provisional


Pssm-ID: 172049  Cd Length: 289  Bit Score: 210.18  E-value: 6.02e-67
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1011507018   1 MSSAQDLRKRIKSVTNTQQITKAMKMVASARLRRAQQKAKGTEPYTERLRHMLhQSMSSLDGGADLPLLTvRP--VNKVA 78
Cdd:PRK13427    1 MATPREIKKRINSVKNTRKITRTMEMVSTAKSKKATDRVNAAHPYANKIKELV-SSLASLEGVVHSPYLR-RPekIRTVA 78

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1011507018  79 YVVVGADKGLAGAYTSNIIKYVQSLLKDTPTDAYG--LFTVGRKPTEYFRGHGYSVVSELQGFSDKPGFHHAQDIVEQVK 156
Cdd:PRK13427   79 LLIITANRGLCGGFNSNLNRMAKARIAELKKKGVNveLHIVGKKGISFFKFAGEKAEKTYTHIDDKSGYKEAEELANLFM 158

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1011507018 157 TMFLSGEVDEVVLVYTKFVNSLLQEVTHERLLPLSLESDTAEAG---ESLFYPDQGSVLEQLLPAYVESTVYNALLHGAA 233
Cdd:PRK13427  159 ERFANESVDAVEIASTVYYSAASQKPETTRVLPLEPPTAAAEGSvqdDVVYEPSPEAILESLLPLVVKTAFLKAILEANA 238

                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|.
gi 1011507018 234 SELGARMTAMTSATDNAGELIGTLHLEYNKLRQAGITNEISEIVGGANALQ 284
Cdd:PRK13427  239 SEQIARRIAMKSATDAASEMIKLLTRGYNRVRQAKITQEISEIVGGADALN 289
PRK13424 PRK13424
F0F1 ATP synthase subunit gamma; Provisional
 1-284 1.61e-66

F0F1 ATP synthase subunit gamma; Provisional


Pssm-ID: 172047  Cd Length: 291  Bit Score: 209.22  E-value: 1.61e-66
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1011507018   1 MSSAQDLRKRIKSVTNTQQITKAMKMVASARLRRAQQKAKGTEPYTERLRHMLHQSMSSLDGGADlPLLTVRP-VNKVAY 79
Cdd:PRK13424    1 MPSLKDVKVKIAGVKKTKQITKAMNMVASAKLRGAQQRIERFRPYAEKFYDMLGDLASRADSSAH-PLLEVREeIKTCGI 79

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1011507018  80 VVVGADKGLAGAYTSNIIKYVQSLLKDTPTD--AYGLFTVGRKPTEYFRGHGYSVVSELQGFSDKPGFHHAQDIVEQVKT 157
Cdd:PRK13424   80 VLITSDRGLCGSFNANLINAALKLAKQKTAEgkTVKFYCVGKKGRDAIRKTDFEIVTAYADQMTSFDFQLANSIGLEVID 159

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1011507018 158 MFLSGEVDEVVLVYTKFVNSLLQEVTHERLLPLSL----ESDTAEAGESLFYPDQGSVLEQLLPAYVESTVYNALLHGAA 233
Cdd:PRK13424  160 GYLTGELDEVVLVYGEFVSMARQLPITLQILPIAPeeaeEEEAGASSEYIYEPSVEGLLAELLPRFIKVQIYRGLLDTSA 239

                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|.
gi 1011507018 234 SELGARMTAMTSATDNAGELIGTLHLEYNKLRQAGITNEISEIVGGANALQ 284
Cdd:PRK13424  240 SEHAARMTAMDNATRNCDDMIGSLTLLYNKTRQASITRELMDIVGGAEALK 290
PRK14110 PRK14110
F0F1 ATP synthase subunit gamma; Provisional
 3-284 1.50e-59

F0F1 ATP synthase subunit gamma; Provisional


Pssm-ID: 184514  Cd Length: 291  Bit Score: 191.14  E-value: 1.50e-59
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1011507018   3 SAQDLRKRIKSVTNTQQITKAMKMVASARLRRAQQKAKGTEPYTERLRHMLHQSMSSLDGgADLPLLTVRPVNKVAYVVV 82
Cdd:PRK14110    5 SPRDIKRKIQGIKNTRRITNAMKVVSAAKLRKAQELLYASRPYSEKLYELISDLAAHIDR-ESHPLLERREEKNVDLVII 83

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1011507018  83 GADKGLAGAYTSNIIKYVQSLL--KDTPTDAYGLFTVGRKPTEYFRGHGYSVVSELQG-FSDKPGFHHAQDIVEQVKTMF 159
Cdd:PRK14110   84 TADRGLAGAFNSNVIKTAERLIqeKQSEGVRVNLILIGRKGVQYFSKRGYNIIKSYEDvFRKEINFSVVKEVGGILASRY 163

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1011507018 160 LSGEVDEVVLVYTKFVNSLLQEVTHERLLPLSLESDTAEAGESLFY---PDQGSVLEQLLPAYVESTVYNALLHGAASEL 236
Cdd:PRK14110  164 IEEETDAVYLINNEMITRATYKPKVRKFLPFEVEAQEKKLDELSVYnieVSEEEFLDKLLQLYLNYQLYRALVESNAAEH 243

                         250       260       270       280
                  ....*....|....*....|....*....|....*....|....*...
gi 1011507018 237 GARMTAMTSATDNAGELIGTLHLEYNKLRQAGITNEISEIVGGANALQ 284
Cdd:PRK14110  244 FARMVAMDNATRNAGELIRKWTLIFNKARQEAITTELIDIVNAAEAMK 291
PRK13422 PRK13422
F0F1 ATP synthase subunit gamma; Provisional
 1-283 2.21e-40

F0F1 ATP synthase subunit gamma; Provisional


Pssm-ID: 184046  Cd Length: 298  Bit Score: 142.11  E-value: 2.21e-40
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1011507018   1 MSSAQDLRKRIKSVTNTQQITKAMKMVASARLRRAQQKAKGTEPYTERLRHMLHQ-SMSSLDggADLPLLTVRPVNKVAY 79
Cdd:PRK13422    1 MSNAREIRSKVQSVKNTQKITGAMELVAASKMRGAIVKMNNVRPYVESANTIIKNvTAASID--YPNPYLFDRDVKRVGY 78

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1011507018  80 VVVGADKGLAGAYTSNIIKYVQSLLKDTPTDAYGL--FTVGRKPTEYFRGHGYSVVSELQGFSDKPGFHHAQDIVEQVKT 157
Cdd:PRK13422   79 IVTSTDRGLCGGLNINLFKHVLKEIKNNIEDRVGVdvCVIGSKAENFFAKLKDVNIVATAHYNDKDKEGSIRAIGGAVKV 158

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1011507018 158 M---FLSGEVDEVVLVYTKFVNSLLQEVTHERLLPLS-------LESDTAEAGES----LFYPDQGSVLEQLLPAYVEST 223
Cdd:PRK13422  159 MldkFTAGEIDRLYMSSNQFVSTIKQRPRLQTLLPIQdifsaeeIKANKEKATKGhwdyIYERDIEEVLNALCIRYIEAQ 238

                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|
gi 1011507018 224 VYNALLHGAASELGARMTAMTSATDNAGELIGTLHLEYNKLRQAGITNEISEIVGGANAL 283
Cdd:PRK13422  239 VRGAILENAACEQAARMMAMKNATDNASDIIDQLKLDYNKVRQAMITQELAEICSGAAAV 298
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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