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Conserved domains on  [gi|1022701365|ref|WP_063452060|]
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MULTISPECIES: YidH family protein [Enterobacter]

Protein Classification

YidH family protein( domain architecture ID 10005415)

YidH family protein is a DUF202 domain-containing protein similar to Escherichia coli inner membrane protein YidH

Gene Ontology:  GO:0005886

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
YidH COG2149
Uncharacterized membrane protein YidH, DUF202 family [Function unknown];
7-112 9.59e-23

Uncharacterized membrane protein YidH, DUF202 family [Function unknown];


:

Pssm-ID: 441752  Cd Length: 126  Bit Score: 85.36  E-value: 9.59e-23
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1022701365   7 GEAPDYRFSLANERTFLAWIRTALGFLAAGVGLDQLAPDFAT-----PLIREALSLLLCLLAGVLAIYGYLRWLRNEKAM 81
Cdd:COG2149    13 GELPDPRFHLANERTFLAWIRTALALIAFGFAIERFGLFLRPlalslPGLSRVLGLALVLLGALLAVLAYIRYRRVERAL 92

                          90       100       110
                  ....*....|....*....|....*....|.
gi 1022701365  82 RLKQDLPYTRGLLIISTILLLVAGIVMLLVF 112
Cdd:COG2149    93 RRGEPLPSSRLALLLAVAVALLGLLLLVYLL 123
 
Name Accession Description Interval E-value
YidH COG2149
Uncharacterized membrane protein YidH, DUF202 family [Function unknown];
7-112 9.59e-23

Uncharacterized membrane protein YidH, DUF202 family [Function unknown];


Pssm-ID: 441752  Cd Length: 126  Bit Score: 85.36  E-value: 9.59e-23
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1022701365   7 GEAPDYRFSLANERTFLAWIRTALGFLAAGVGLDQLAPDFAT-----PLIREALSLLLCLLAGVLAIYGYLRWLRNEKAM 81
Cdd:COG2149    13 GELPDPRFHLANERTFLAWIRTALALIAFGFAIERFGLFLRPlalslPGLSRVLGLALVLLGALLAVLAYIRYRRVERAL 92

                          90       100       110
                  ....*....|....*....|....*....|.
gi 1022701365  82 RLKQDLPYTRGLLIISTILLLVAGIVMLLVF 112
Cdd:COG2149    93 RRGEPLPSSRLALLLAVAVALLGLLLLVYLL 123
DUF202 pfam02656
Domain of unknown function (DUF202); This family consists of hypothetical proteins some of ...
 13-80 1.37e-12

Domain of unknown function (DUF202); This family consists of hypothetical proteins some of which are putative membrane proteins. No functional information or experimental verification of function is known. This domain is around 100 amino acids long.


Pssm-ID: 396980  Cd Length: 68  Bit Score: 58.01  E-value: 1.37e-12
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1022701365  13 RFSLANERTFLAWIRTALGFLAAGVGLDQLAPDFATPLIREALSLLLCLLAGVLAIYGYLRWLRNEKA 80
Cdd:pfam02656   1 RDGLANERTFLAWLRTSLALIALGVALLRFFLHGGPTGLALILGLILIVLGILTLLYGLRRYLRRVRA 68
 
Name Accession Description Interval E-value
YidH COG2149
Uncharacterized membrane protein YidH, DUF202 family [Function unknown];
7-112 9.59e-23

Uncharacterized membrane protein YidH, DUF202 family [Function unknown];


Pssm-ID: 441752  Cd Length: 126  Bit Score: 85.36  E-value: 9.59e-23
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1022701365   7 GEAPDYRFSLANERTFLAWIRTALGFLAAGVGLDQLAPDFAT-----PLIREALSLLLCLLAGVLAIYGYLRWLRNEKAM 81
Cdd:COG2149    13 GELPDPRFHLANERTFLAWIRTALALIAFGFAIERFGLFLRPlalslPGLSRVLGLALVLLGALLAVLAYIRYRRVERAL 92

                          90       100       110
                  ....*....|....*....|....*....|.
gi 1022701365  82 RLKQDLPYTRGLLIISTILLLVAGIVMLLVF 112
Cdd:COG2149    93 RRGEPLPSSRLALLLAVAVALLGLLLLVYLL 123
DUF202 pfam02656
Domain of unknown function (DUF202); This family consists of hypothetical proteins some of ...
 13-80 1.37e-12

Domain of unknown function (DUF202); This family consists of hypothetical proteins some of which are putative membrane proteins. No functional information or experimental verification of function is known. This domain is around 100 amino acids long.


Pssm-ID: 396980  Cd Length: 68  Bit Score: 58.01  E-value: 1.37e-12
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1022701365  13 RFSLANERTFLAWIRTALGFLAAGVGLDQLAPDFATPLIREALSLLLCLLAGVLAIYGYLRWLRNEKA 80
Cdd:pfam02656   1 RDGLANERTFLAWLRTSLALIALGVALLRFFLHGGPTGLALILGLILIVLGILTLLYGLRRYLRRVRA 68
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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