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Conserved domains on  [gi|1032571687|ref|WP_064205405|]
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MULTISPECIES: shikimate kinase [Mammaliicoccus]

Protein Classification

shikimate kinase( domain architecture ID 11431165)

shikimate kinase catalyzes the specific phosphorylation of the 3-hydroxylgroup of shikimic acid using ATP as a cosubstrate

CATH:  3.40.50.300
EC:  2.7.1.71
Gene Ontology:  GO:0009073|GO:0004765|GO:0000287|GO:0005524|GO:0008652
PubMed:  2279393|7870841
SCOP:  4003925

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
AroK COG0703
Shikimate kinase [Amino acid transport and metabolism]; Shikimate kinase is part of the ...
 3-164 6.35e-60

Shikimate kinase [Amino acid transport and metabolism]; Shikimate kinase is part of the Pathway/BioSystem: Aromatic amino acid biosynthesis


:

Pssm-ID: 440467 [Multi-domain]  Cd Length: 165  Bit Score: 183.41  E-value: 6.35e-60
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1032571687   3 VVLIGFMGVGKTSIGNYLGEHYDKPLVDIDTYIVETTKLSIPEIFAKYGESHFRDLEKKSLEEWIDKD-VIISTGGGIIE 81
Cdd:COG0703     1 IVLIGMMGAGKSTVGRLLAKRLGLPFVDTDAEIEERAGMSIPEIFAEEGEAGFRELEREVLAELLEEEnAVIATGGGAVL 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1032571687  82 SEASRNVMKGNPHNIWLKCDVDTVYERINHDPNRPNANGKS-LEDLKSLYSKRESSYNDIAFIHIDAD-RPKEVVVTEII 159
Cdd:COG0703    81 SPENRELLKEHGTVVYLDASPETLLERLRRDDNRPLLQGEDpRERLEELLAEREPLYREVADITVDTDgRSPEEVVDEIL 160


                  ....*
gi 1032571687 160 NSLDK 164
Cdd:COG0703   161 EALEE 165
 
Name Accession Description Interval E-value
AroK COG0703
Shikimate kinase [Amino acid transport and metabolism]; Shikimate kinase is part of the ...
 3-164 6.35e-60

Shikimate kinase [Amino acid transport and metabolism]; Shikimate kinase is part of the Pathway/BioSystem: Aromatic amino acid biosynthesis


Pssm-ID: 440467 [Multi-domain]  Cd Length: 165  Bit Score: 183.41  E-value: 6.35e-60
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1032571687   3 VVLIGFMGVGKTSIGNYLGEHYDKPLVDIDTYIVETTKLSIPEIFAKYGESHFRDLEKKSLEEWIDKD-VIISTGGGIIE 81
Cdd:COG0703     1 IVLIGMMGAGKSTVGRLLAKRLGLPFVDTDAEIEERAGMSIPEIFAEEGEAGFRELEREVLAELLEEEnAVIATGGGAVL 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1032571687  82 SEASRNVMKGNPHNIWLKCDVDTVYERINHDPNRPNANGKS-LEDLKSLYSKRESSYNDIAFIHIDAD-RPKEVVVTEII 159
Cdd:COG0703    81 SPENRELLKEHGTVVYLDASPETLLERLRRDDNRPLLQGEDpRERLEELLAEREPLYREVADITVDTDgRSPEEVVDEIL 160


                  ....*
gi 1032571687 160 NSLDK 164
Cdd:COG0703   161 EALEE 165
SK cd00464
Shikimate kinase (SK) is the fifth enzyme in the shikimate pathway, a seven-step biosynthetic ...
 2-149 2.62e-55

Shikimate kinase (SK) is the fifth enzyme in the shikimate pathway, a seven-step biosynthetic pathway which converts erythrose-4-phosphate to chorismic acid, found in bacteria, fungi and plants. Chorismic acid is a important intermediate in the synthesis of aromatic compounds, such as aromatic amino acids, p-aminobenzoic acid, folate and ubiquinone. Shikimate kinase catalyses the phosphorylation of the 3-hydroxyl group of shikimic acid using ATP.


Pssm-ID: 238260 [Multi-domain]  Cd Length: 154  Bit Score: 171.58  E-value: 2.62e-55
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1032571687   2 SVVLIGFMGVGKTSIGNYLGEHYDKPLVDIDTYIVETTKLSIPEIFAKYGESHFRDLE-KKSLEEWIDKDVIISTGGGII 80
Cdd:cd00464     1 NIVLIGMMGAGKTTVGRLLAKALGLPFVDLDELIEQRAGMSIPEIFAEEGEEGFRELErEVLLLLLTKENAVIATGGGAV 80

                          90       100       110       120       130       140
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1032571687  81 ESEASRNVMKGNPHNIWLKCDVDTVYERINHDPNRPNANGKSLEDLKSLYSKRESSYNDIAFIHIDADR 149
Cdd:cd00464    81 LREENRRLLLENGIVVWLDASPEELLERLARDKTRPLLQDEDPERLRELLEEREPLYREVADLTIDTDE 149
aroK PRK00131
shikimate kinase; Reviewed
 1-166 3.65e-55

shikimate kinase; Reviewed


Pssm-ID: 234654 [Multi-domain]  Cd Length: 175  Bit Score: 171.91  E-value: 3.65e-55
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1032571687   1 MSVVLIGFMGVGKTSIGNYLGEHYDKPLVDIDTYIVETTKLSIPEIFAKYGESHFRDLEKKSLEEWIDK-DVIISTGGGI 79
Cdd:PRK00131    5 PNIVLIGFMGAGKSTIGRLLAKRLGYDFIDTDHLIEARAGKSIPEIFEEEGEAAFRELEEEVLAELLARhNLVISTGGGA 84

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1032571687  80 IESEASRNVMKGNPHNIWLKCDVDTVYERINHDPNRP-NANGKSLEDLKSLYSKRESSYNDIAFIHIDAD-RPKEVVVTE 157
Cdd:PRK00131   85 VLREENRALLRERGTVVYLDASFEELLRRLRRDRNRPlLQTNDPKEKLRDLYEERDPLYEEVADITVETDgRSPEEVVNE 164


                  ....*....
gi 1032571687 158 IINSLDKDI 166
Cdd:PRK00131  165 ILEKLEAAW 173
SKI pfam01202
Shikimate kinase;
9-162 2.43e-53

Shikimate kinase;


Pssm-ID: 426122 [Multi-domain]  Cd Length: 159  Bit Score: 166.60  E-value: 2.43e-53
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1032571687   9 MGVGKTSIGNYLGEHYDKPLVDIDTYIVETTKLSIPEIFAKYGESHFRDLEKKSLEEWID-KDVIISTGGGIIESEASRN 87
Cdd:pfam01202   1 MGAGKSTIGRLLAKALGLPFIDTDEEIEKRTGMSIAEIFEEEGEEGFRRLESEVLKELLAeHGLVIATGGGAVLSEENRD 80

                          90       100       110       120       130       140       150
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1032571687  88 VMKGNPHNIWLKCDVDTVYERINHDPNRPNANGKSL--EDLKSLYSKRESSYNDIAFIHIDAD-RPKEVVVTEIINSL 162
Cdd:pfam01202  81 LLKERGIVIYLDAPLEVLLERLKRDKTRPLLQNKDPeeELLELLFEERDPLYEEAADIVIDTDeSSPEEVATEILEAL 158
 
Name Accession Description Interval E-value
AroK COG0703
Shikimate kinase [Amino acid transport and metabolism]; Shikimate kinase is part of the ...
 3-164 6.35e-60

Shikimate kinase [Amino acid transport and metabolism]; Shikimate kinase is part of the Pathway/BioSystem: Aromatic amino acid biosynthesis


Pssm-ID: 440467 [Multi-domain]  Cd Length: 165  Bit Score: 183.41  E-value: 6.35e-60
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1032571687   3 VVLIGFMGVGKTSIGNYLGEHYDKPLVDIDTYIVETTKLSIPEIFAKYGESHFRDLEKKSLEEWIDKD-VIISTGGGIIE 81
Cdd:COG0703     1 IVLIGMMGAGKSTVGRLLAKRLGLPFVDTDAEIEERAGMSIPEIFAEEGEAGFRELEREVLAELLEEEnAVIATGGGAVL 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1032571687  82 SEASRNVMKGNPHNIWLKCDVDTVYERINHDPNRPNANGKS-LEDLKSLYSKRESSYNDIAFIHIDAD-RPKEVVVTEII 159
Cdd:COG0703    81 SPENRELLKEHGTVVYLDASPETLLERLRRDDNRPLLQGEDpRERLEELLAEREPLYREVADITVDTDgRSPEEVVDEIL 160


                  ....*
gi 1032571687 160 NSLDK 164
Cdd:COG0703   161 EALEE 165
SK cd00464
Shikimate kinase (SK) is the fifth enzyme in the shikimate pathway, a seven-step biosynthetic ...
 2-149 2.62e-55

Shikimate kinase (SK) is the fifth enzyme in the shikimate pathway, a seven-step biosynthetic pathway which converts erythrose-4-phosphate to chorismic acid, found in bacteria, fungi and plants. Chorismic acid is a important intermediate in the synthesis of aromatic compounds, such as aromatic amino acids, p-aminobenzoic acid, folate and ubiquinone. Shikimate kinase catalyses the phosphorylation of the 3-hydroxyl group of shikimic acid using ATP.


Pssm-ID: 238260 [Multi-domain]  Cd Length: 154  Bit Score: 171.58  E-value: 2.62e-55
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1032571687   2 SVVLIGFMGVGKTSIGNYLGEHYDKPLVDIDTYIVETTKLSIPEIFAKYGESHFRDLE-KKSLEEWIDKDVIISTGGGII 80
Cdd:cd00464     1 NIVLIGMMGAGKTTVGRLLAKALGLPFVDLDELIEQRAGMSIPEIFAEEGEEGFRELErEVLLLLLTKENAVIATGGGAV 80

                          90       100       110       120       130       140
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1032571687  81 ESEASRNVMKGNPHNIWLKCDVDTVYERINHDPNRPNANGKSLEDLKSLYSKRESSYNDIAFIHIDADR 149
Cdd:cd00464    81 LREENRRLLLENGIVVWLDASPEELLERLARDKTRPLLQDEDPERLRELLEEREPLYREVADLTIDTDE 149
aroK PRK00131
shikimate kinase; Reviewed
 1-166 3.65e-55

shikimate kinase; Reviewed


Pssm-ID: 234654 [Multi-domain]  Cd Length: 175  Bit Score: 171.91  E-value: 3.65e-55
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1032571687   1 MSVVLIGFMGVGKTSIGNYLGEHYDKPLVDIDTYIVETTKLSIPEIFAKYGESHFRDLEKKSLEEWIDK-DVIISTGGGI 79
Cdd:PRK00131    5 PNIVLIGFMGAGKSTIGRLLAKRLGYDFIDTDHLIEARAGKSIPEIFEEEGEAAFRELEEEVLAELLARhNLVISTGGGA 84

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1032571687  80 IESEASRNVMKGNPHNIWLKCDVDTVYERINHDPNRP-NANGKSLEDLKSLYSKRESSYNDIAFIHIDAD-RPKEVVVTE 157
Cdd:PRK00131   85 VLREENRALLRERGTVVYLDASFEELLRRLRRDRNRPlLQTNDPKEKLRDLYEERDPLYEEVADITVETDgRSPEEVVNE 164


                  ....*....
gi 1032571687 158 IINSLDKDI 166
Cdd:PRK00131  165 ILEKLEAAW 173
SKI pfam01202
Shikimate kinase;
9-162 2.43e-53

Shikimate kinase;


Pssm-ID: 426122 [Multi-domain]  Cd Length: 159  Bit Score: 166.60  E-value: 2.43e-53
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1032571687   9 MGVGKTSIGNYLGEHYDKPLVDIDTYIVETTKLSIPEIFAKYGESHFRDLEKKSLEEWID-KDVIISTGGGIIESEASRN 87
Cdd:pfam01202   1 MGAGKSTIGRLLAKALGLPFIDTDEEIEKRTGMSIAEIFEEEGEEGFRRLESEVLKELLAeHGLVIATGGGAVLSEENRD 80

                          90       100       110       120       130       140       150
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1032571687  88 VMKGNPHNIWLKCDVDTVYERINHDPNRPNANGKSL--EDLKSLYSKRESSYNDIAFIHIDAD-RPKEVVVTEIINSL 162
Cdd:pfam01202  81 LLKERGIVIYLDAPLEVLLERLKRDKTRPLLQNKDPeeELLELLFEERDPLYEEAADIVIDTDeSSPEEVATEILEAL 158
PRK13946 PRK13946
shikimate kinase; Provisional
 2-163 5.42e-38

shikimate kinase; Provisional


Pssm-ID: 184411 [Multi-domain]  Cd Length: 184  Bit Score: 128.50  E-value: 5.42e-38
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1032571687   2 SVVLIGFMGVGKTSIGNYLGEHYDKPLVDIDTYIVETTKLSIPEIFAKYGESHFRDLEKKSLEEWIDKD-VIISTGGGII 80
Cdd:PRK13946   12 TVVLVGLMGAGKSTVGRRLATMLGLPFLDADTEIERAARMTIAEIFAAYGEPEFRDLERRVIARLLKGGpLVLATGGGAF 91

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1032571687  81 ESEASRNVMKGNPHNIWLKCDVDTVYERINHDPNRP---NANGKslEDLKSLYSKRESSYNDiAFIHIDA-DRPKEVVVT 156
Cdd:PRK13946   92 MNEETRAAIAEKGISVWLKADLDVLWERVSRRDTRPllrTADPK--ETLARLMEERYPVYAE-ADLTVASrDVPKEVMAD 168


                  ....*..
gi 1032571687 157 EIINSLD 163
Cdd:PRK13946  169 EVIEALA 175
PRK13948 PRK13948
shikimate kinase; Provisional
 3-162 1.26e-30

shikimate kinase; Provisional


Pssm-ID: 184413 [Multi-domain]  Cd Length: 182  Bit Score: 109.49  E-value: 1.26e-30
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1032571687   3 VVLIGFMGVGKTSIGNYLGEHYDKPLVDIDTYIVETTKLSIPEIFAKYGESHFRDLEKKSLEEWIDKD-VIISTGGGIIE 81
Cdd:PRK13948   13 VALAGFMGTGKSRIGWELSRALMLHFIDTDRYIERVTGKSIPEIFRHLGEAYFRRCEAEVVRRLTRLDyAVISLGGGTFM 92

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1032571687  82 SEASRNVMKGNPHNIWLKCDVDTVYERINHDpNRPN-ANGKSLEDLKSLYSKRESSYNDiAFIHIDAD-RPKEVVVTEII 159
Cdd:PRK13948   93 HEENRRKLLSRGPVVVLWASPETIYERTRPG-DRPLlQVEDPLGRIRTLLNEREPVYRQ-ATIHVSTDgRRSEEVVEEIV 170


                  ...
gi 1032571687 160 NSL 162
Cdd:PRK13948  171 EKL 173
aroL PRK03731
shikimate kinase AroL;
5-162 2.39e-28

shikimate kinase AroL;


Pssm-ID: 235153 [Multi-domain]  Cd Length: 171  Bit Score: 103.10  E-value: 2.39e-28
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1032571687   5 LIGFMGVGKTSIGNYLGEHYDKPLVDIDTYIVETTKLSIPEIFAKYGESHFRDLEKKSLEEWIDKDVIISTGGGIIESEA 84
Cdd:PRK03731    7 LVGARGCGKTTVGMALAQALGYRFVDTDQWLQSTSNMTVAEIVEREGWAGFRARESAALEAVTAPSTVIATGGGIILTEE 86

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1032571687  85 SRNVMKGNPHNIWLKCDVDTVYERINHDPN---RPNANGKSL-EDLKSLYSKRESSYNDIAFIHIDADRPKEVVVTEIIN 160
Cdd:PRK03731   87 NRHFMRNNGIVIYLCAPVSVLANRLEANPEedqRPTLTGKPIsEEVAEVLAEREALYREVAHHIIDATQPPSQVVSEILS 166


                  ..
gi 1032571687 161 SL 162
Cdd:PRK03731  167 AL 168
PRK13947 PRK13947
shikimate kinase; Provisional
 3-159 6.61e-27

shikimate kinase; Provisional


Pssm-ID: 184412 [Multi-domain]  Cd Length: 171  Bit Score: 99.78  E-value: 6.61e-27
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1032571687   3 VVLIGFMGVGKTSIGNYLGEHYDKPLVDIDTYIVETTKLSIPEIFAKYGESHFRDLEKKSLEEWIDKD-VIISTGGGIIE 81
Cdd:PRK13947    4 IVLIGFMGTGKTTVGKRVATTLSFGFIDTDKEIEKMTGMTVAEIFEKDGEVRFRSEEKLLVKKLARLKnLVIATGGGVVL 83

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1032571687  82 SEASRNVMKGNPHNIWLKCDVDTVYERINHDPNRPNAN-GKSLEDLKSLYSKRESSYnDIAFIHID-ADRPKEVVVTEII 159
Cdd:PRK13947   84 NPENVVQLRKNGVVICLKARPEVILRRVGKKKSRPLLMvGDPEERIKELLKEREPFY-DFADYTIDtGDMTIDEVAEEII 162
PRK13951 PRK13951
bifunctional shikimate kinase AroK/3-dehydroquinate synthase AroB;
1-172 2.17e-21

bifunctional shikimate kinase AroK/3-dehydroquinate synthase AroB;


Pssm-ID: 172457 [Multi-domain]  Cd Length: 488  Bit Score: 89.96  E-value: 2.17e-21
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1032571687   1 MSVVLIGFMGVGKTSIGNYLGEHYDKPLVDIDTYIVETTKLSIPEIFAKYGESHFRDLEKKSLEEWIDKD-VIISTGGGI 79
Cdd:PRK13951    1 MRIFLVGMMGSGKSTIGKRVSEVLDLQFIDMDEEIERREGRSVRRIFEEDGEEYFRLKEKELLRELVERDnVVVATGGGV 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1032571687  80 IESEASRNVMKgNPHNIWLKCDVDTVYERINHDpNRP-NANGKslEDLKSLYSKRESSYNDIAFIHIDADRPKEVVVTEI 158
Cdd:PRK13951   81 VIDPENRELLK-KEKTLFLYAPPEVLMERVTTE-NRPlLREGK--ERIREIWERRKQFYTEFRGIDTSKLNEWETTALVV 156

                         170
                  ....*....|....
gi 1032571687 159 INSLDKDIFANDQS 172
Cdd:PRK13951  157 LEALDEKEISTIEK 170
aroK PRK05057
shikimate kinase AroK;
5-164 3.60e-20

shikimate kinase AroK;


Pssm-ID: 235335 [Multi-domain]  Cd Length: 172  Bit Score: 82.07  E-value: 3.60e-20
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1032571687   5 LIGFMGVGKTSIGNYLGEHYDKPLVDIDTYIVETTKLSIPEIFAKYGESHFRDLEKKSLEEWIDKD-VIISTGGGIIESE 83
Cdd:PRK05057    9 LVGPMGAGKSTIGRQLAQQLNMEFYDSDQEIEKRTGADIGWVFDVEGEEGFRDREEKVINELTEKQgIVLATGGGSVKSR 88

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1032571687  84 ASRNVMKGNPHNIWLKCDVDTVYERINHDPNRPNANGKSLED-LKSLYSKRESSYNDIAFIHIDAD-RPKEVVVTEIINS 161
Cdd:PRK05057   89 ETRNRLSARGVVVYLETTIEKQLARTQRDKKRPLLQVDDPREvLEALANERNPLYEEIADVTIRTDdQSAKVVANQIIHM 168


                  ...
gi 1032571687 162 LDK 164
Cdd:PRK05057  169 LES 171
PRK13949 PRK13949
shikimate kinase; Provisional
 3-149 6.24e-20

shikimate kinase; Provisional


Pssm-ID: 140006 [Multi-domain]  Cd Length: 169  Bit Score: 81.70  E-value: 6.24e-20
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1032571687   3 VVLIGFMGVGKTSIGNYLGEHYDKPLVDIDTYIVETTKLSIPEIFAKYGESHFRDLEKKSLEEWID-KDVIISTGGGIIE 81
Cdd:PRK13949    4 IFLVGYMGAGKTTLGKALARELGLSFIDLDFFIENRFHKTVGDIFAERGEAVFRELERNMLHEVAEfEDVVISTGGGAPC 83

                          90       100       110       120       130       140       150
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1032571687  82 SEASRNVMKGNPHNIWLKCDVDTVYER-INHDPNRPNANGKSLEDLKSL----YSKRESSYNDIAFIhIDADR 149
Cdd:PRK13949   84 FFDNMELMNASGTTVYLKVSPEVLFVRlRLAKQQRPLLKGKSDEELLDFiieaLEKRAPFYRQAKII-FNADK 155
PRK14021 PRK14021
bifunctional shikimate kinase/3-dehydroquinate synthase; Provisional
 4-145 7.54e-20

bifunctional shikimate kinase/3-dehydroquinate synthase; Provisional


Pssm-ID: 184458 [Multi-domain]  Cd Length: 542  Bit Score: 85.68  E-value: 7.54e-20
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1032571687   4 VLIGFMGVGKTSIGNYLGEHYDKPLVDIDTYIVETTKLSIPEIFAKYGESHFRDLEKKSLEEWIDK-DVIISTGGGIIES 82
Cdd:PRK14021   10 VIIGMMGAGKTRVGKEVAQMMRLPFADADVEIEREIGMSIPSYFEEYGEPAFREVEADVVADMLEDfDGIFSLGGGAPMT 89

                          90       100       110       120       130       140
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1032571687  83 EASRNV----MKGNPHNIWLKCDVDTVYERINHDPNRPNANGKSLEDLKSLYSKRESSYNDIAFIHI 145
Cdd:PRK14021   90 PSTQHAlasyIAHGGRVVYLDADPKEAMERANRGGGRPMLNGDANKRWKKLFKQRDPVFRQVANVHV 156
PRK08154 PRK08154
anaerobic benzoate catabolism transcriptional regulator; Reviewed
 3-137 2.46e-18

anaerobic benzoate catabolism transcriptional regulator; Reviewed


Pssm-ID: 236167 [Multi-domain]  Cd Length: 309  Bit Score: 80.00  E-value: 2.46e-18
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1032571687   3 VVLIGFMGVGKTSIGNYLGEHYDKPLVDIDTYIVETTKLSIPEIFAKYGESHFRDLEKKSLEEWIDK--DVIISTGGGII 80
Cdd:PRK08154  136 IALIGLRGAGKSTLGRMLAARLGVPFVELNREIEREAGLSVSEIFALYGQEGYRRLERRALERLIAEheEMVLATGGGIV 215

                          90       100       110       120       130
                  ....*....|....*....|....*....|....*....|....*....|....*....
gi 1032571687  81 ESEASRNVMKGNPHNIWLKCDVDTVYERINHDPN-RPNANGKS-LEDLKSLYSKRESSY 137
Cdd:PRK08154  216 SEPATFDLLLSHCYTVWLKASPEEHMARVRAQGDlRPMADNREaMEDLRRILASREPLY 274
PRK00625 PRK00625
shikimate kinase; Provisional
 1-125 1.15e-11

shikimate kinase; Provisional


Pssm-ID: 134335 [Multi-domain]  Cd Length: 173  Bit Score: 59.77  E-value: 1.15e-11
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1032571687   1 MSVVLIGFMGVGKTSIGNYLGEHYDKPLVDIDTYIVE--TTKL--SIPEIFAKYGESHFRDLEKKSLEEWIDKDVIISTG 76
Cdd:PRK00625    1 MQIFLCGLPTVGKTSFGKALAKFLSLPFFDTDDLIVSnyHGALysSPKEIYQAYGEEGFCREEFLALTSLPVIPSIVALG 80

                          90       100       110       120       130
                  ....*....|....*....|....*....|....*....|....*....|.
gi 1032571687  77 GGIIESEASRNVMKGNPHNIWLKCDVDTVYERINHD--PNRPnANGKSLED 125
Cdd:PRK00625   81 GGTLMIEPSYAHIRNRGLLVLLSLPIATIYQRLQKRglPERL-KHAPSLEE 130
PLN02199 PLN02199
shikimate kinase
 2-109 3.15e-11

shikimate kinase


Pssm-ID: 177850 [Multi-domain]  Cd Length: 303  Bit Score: 60.10  E-value: 3.15e-11
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1032571687   2 SVVLIGFMGVGKTSIGNYLGEHYDKPLVDIDTYIVETTK-LSIPEIFAKYGESHFRDLEKKSLEEWIDK-DVIISTGGG- 78
Cdd:PLN02199  104 SMYLVGMMGSGKTTVGKLMSKVLGYTFFDCDTLIEQAMNgTSVAEIFVHHGENFFRGKETDALKKLSSRyQVVVSTGGGa 183

                          90       100       110
                  ....*....|....*....|....*....|.
gi 1032571687  79 IIESEASRNVMKGNphNIWLKCDVDTVYERI 109
Cdd:PLN02199  184 VIRPINWKYMHKGI--SIWLDVPLEALAHRI 212
PRK07261 PRK07261
DNA topology modulation protein;
1-33 1.53e-03

DNA topology modulation protein;


Pssm-ID: 180911 [Multi-domain]  Cd Length: 171  Bit Score: 37.39  E-value: 1.53e-03
                          10        20        30
                  ....*....|....*....|....*....|...
gi 1032571687   1 MSVVLIGFMGVGKTSIGNYLGEHYDKPLVDIDT 33
Cdd:PRK07261    1 MKIAIIGYSGSGKSTLARKLSQHYNCPVLHLDT 33
AAA_18 pfam13238
AAA domain;
3-117 6.79e-03

AAA domain;


Pssm-ID: 433052 [Multi-domain]  Cd Length: 128  Bit Score: 35.10  E-value: 6.79e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1032571687   3 VVLIGFMGVGKTSIGNYLGEHYDKPLVDIDtyiVETTKLSIPEIFAKYGESH-----FRDLEKKSLEEWID----KDVII 73
Cdd:pfam13238   1 ILITGTPGVGKTTLAKELSKRLGFGDNVRD---LALENGLVLGDDPETRESKrldedKLDRLLDLLEENAAleegGNLII 77

                          90       100       110       120
                  ....*....|....*....|....*....|....*....|....
gi 1032571687  74 STGGGIIESEASRNVmkgnpHNIWLKCDVDTVYERINHDPNRPN 117
Cdd:pfam13238  78 DGHLAELEPERAKDL-----VGIVLRASPEELLERLEKRGYEEA 116
PRK04182 PRK04182
cytidylate kinase; Provisional
 1-146 9.95e-03

cytidylate kinase; Provisional


Pssm-ID: 235244 [Multi-domain]  Cd Length: 180  Bit Score: 35.17  E-value: 9.95e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1032571687   1 MSVVLIGFMGVGKTSIGNYLGEHYDKPLV---DIDTYIVETTKLSIPEiFAKYGESHF---RDLEKKSLEEWIDKDVIis 74
Cdd:PRK04182    1 MIITISGPPGSGKTTVARLLAEKLGLKHVsagEIFRELAKERGMSLEE-FNKYAEEDPeidKEIDRRQLEIAEKEDNV-- 77

                          90       100       110       120       130       140       150
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1032571687  75 tgggIIESEASRNVMKGNPH-NIWLKCDVDTVYERINhdpNRpnaNGKSLEDLKSLYSKRESS----YNDIAFIHID 146
Cdd:PRK04182   78 ----VLEGRLAGWMAKDYADlKIWLKAPLEVRAERIA---ER---EGISVEEALEETIEREESeakrYKEYYGIDID 144
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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