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Conserved domains on  [gi|1048228042|ref|WP_065802501|]
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DUF4054 domain-containing protein [Klebsiella pneumoniae]

Protein Classification

DUF4054 domain-containing protein( domain architecture ID 10593976)

uncharacterized DUF4054 domain-containing protein

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
DUF4054 pfam13262
Protein of unknown function (DUF4054); This family of proteins is functionally uncharacterized. ...
 13-122 7.05e-24

Protein of unknown function (DUF4054); This family of proteins is functionally uncharacterized. This family of proteins is found in bacteria and viruses. Proteins in this family are typically between 120 and 152 amino acids in length.


:

Pssm-ID: 463821  Cd Length: 105  Bit Score: 88.57  E-value: 7.05e-24
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1048228042  13 FRATFPQFAdgtKYPTPMIQTRLNLADAMLSESRFGvDIFPYIVGLYVAHYMylyaADMRGVAVGTAGGVNSGIQTAKSV 92
Cdd:pfam13262   1 FRARFPEFA---AVPDAAIAAWLDEAALEVNATRFG-ALRERALALLAAHLL----RDGRAAAAGGSGGAAAGRVTSASV 72

                          90       100       110
                  ....*....|....*....|....*....|
gi 1048228042  93 DKVSASYDASATlDPNAGFWNNSRYGSEFW 122
Cdd:pfam13262  73 GSLSVSYDASAV-APSAGWLNQTPYGQEYL 101
 
Name Accession Description Interval E-value
DUF4054 pfam13262
Protein of unknown function (DUF4054); This family of proteins is functionally uncharacterized. ...
 13-122 7.05e-24

Protein of unknown function (DUF4054); This family of proteins is functionally uncharacterized. This family of proteins is found in bacteria and viruses. Proteins in this family are typically between 120 and 152 amino acids in length.


Pssm-ID: 463821  Cd Length: 105  Bit Score: 88.57  E-value: 7.05e-24
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1048228042  13 FRATFPQFAdgtKYPTPMIQTRLNLADAMLSESRFGvDIFPYIVGLYVAHYMylyaADMRGVAVGTAGGVNSGIQTAKSV 92
Cdd:pfam13262   1 FRARFPEFA---AVPDAAIAAWLDEAALEVNATRFG-ALRERALALLAAHLL----RDGRAAAAGGSGGAAAGRVTSASV 72

                          90       100       110
                  ....*....|....*....|....*....|
gi 1048228042  93 DKVSASYDASATlDPNAGFWNNSRYGSEFW 122
Cdd:pfam13262  73 GSLSVSYDASAV-APSAGWLNQTPYGQEYL 101
 
Name Accession Description Interval E-value
DUF4054 pfam13262
Protein of unknown function (DUF4054); This family of proteins is functionally uncharacterized. ...
 13-122 7.05e-24

Protein of unknown function (DUF4054); This family of proteins is functionally uncharacterized. This family of proteins is found in bacteria and viruses. Proteins in this family are typically between 120 and 152 amino acids in length.


Pssm-ID: 463821  Cd Length: 105  Bit Score: 88.57  E-value: 7.05e-24
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1048228042  13 FRATFPQFAdgtKYPTPMIQTRLNLADAMLSESRFGvDIFPYIVGLYVAHYMylyaADMRGVAVGTAGGVNSGIQTAKSV 92
Cdd:pfam13262   1 FRARFPEFA---AVPDAAIAAWLDEAALEVNATRFG-ALRERALALLAAHLL----RDGRAAAAGGSGGAAAGRVTSASV 72

                          90       100       110
                  ....*....|....*....|....*....|
gi 1048228042  93 DKVSASYDASATlDPNAGFWNNSRYGSEFW 122
Cdd:pfam13262  73 GSLSVSYDASAV-APSAGWLNQTPYGQEYL 101
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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