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Conserved domains on  [gi|1049010426|ref|WP_065814010|]
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MULTISPECIES: YpmA family protein [Halobacillus]

Protein Classification

YpmA family protein( domain architecture ID 10624094)

YpmA family protein similar to Bacillus subtilis protein YpmA

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
DUF4264 pfam14084
Protein of unknown function (DUF4264); This family of proteins is functionally uncharacterized. ...
 4-56 5.20e-21

Protein of unknown function (DUF4264); This family of proteins is functionally uncharacterized. This family of proteins is found in bacteria. Proteins in this family are approximately 60 amino acids in length.


:

Pssm-ID: 433705  Cd Length: 52  Bit Score: 76.44  E-value: 5.20e-21
                         10        20        30        40        50
                 ....*....|....*....|....*....|....*....|....*....|...
gi 1049010426  4 KVETLSTVRIQKSDDLYKIVDTLNRTLKDKNLMFGLALDDEDNEtAVFTIYRT 56
Cdd:pfam14084  1 KLELIATKRFEANDELYKVVDFLNKTLKDKGLMFGLSKDEEKNK-MVITIYET 52
 
Name Accession Description Interval E-value
DUF4264 pfam14084
Protein of unknown function (DUF4264); This family of proteins is functionally uncharacterized. ...
 4-56 5.20e-21

Protein of unknown function (DUF4264); This family of proteins is functionally uncharacterized. This family of proteins is found in bacteria. Proteins in this family are approximately 60 amino acids in length.


Pssm-ID: 433705  Cd Length: 52  Bit Score: 76.44  E-value: 5.20e-21
                         10        20        30        40        50
                 ....*....|....*....|....*....|....*....|....*....|...
gi 1049010426  4 KVETLSTVRIQKSDDLYKIVDTLNRTLKDKNLMFGLALDDEDNEtAVFTIYRT 56
Cdd:pfam14084  1 KLELIATKRFEANDELYKVVDFLNKTLKDKGLMFGLSKDEEKNK-MVITIYET 52
 
Name Accession Description Interval E-value
DUF4264 pfam14084
Protein of unknown function (DUF4264); This family of proteins is functionally uncharacterized. ...
 4-56 5.20e-21

Protein of unknown function (DUF4264); This family of proteins is functionally uncharacterized. This family of proteins is found in bacteria. Proteins in this family are approximately 60 amino acids in length.


Pssm-ID: 433705  Cd Length: 52  Bit Score: 76.44  E-value: 5.20e-21
                         10        20        30        40        50
                 ....*....|....*....|....*....|....*....|....*....|...
gi 1049010426  4 KVETLSTVRIQKSDDLYKIVDTLNRTLKDKNLMFGLALDDEDNEtAVFTIYRT 56
Cdd:pfam14084  1 KLELIATKRFEANDELYKVVDFLNKTLKDKGLMFGLSKDEEKNK-MVITIYET 52
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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