|
Name |
Accession |
Description |
Interval |
E-value |
| PRK10510 |
PRK10510 |
OmpA family lipoprotein; |
5-227 |
1.50e-53 |
|
OmpA family lipoprotein;
Pssm-ID: 182507 [Multi-domain] Cd Length: 219 Bit Score: 172.37 E-value: 1.50e-53
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1051752658 5 RRLLVVATAVAL---LSGCASpNPYDGSQ--GQAGNGSESGMSKTAKYGGLGALAGAlagaaidhnhRGKGALIGAVVAG 79
Cdd:PRK10510 3 KRVYLIAAVVSGalaVSGCTT-NPYTGEReaGKSGIGAGIGSLVGAGIGALSSSKKD----------RGKGALIGAAAGA 71
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1051752658 80 AGAAGYGYYADQQEKKLRESMANTGVEVQRQGDQIKLIMPGNITFATNSDAISSSFYQPLNNLANSLKQFNQNTIQIVGY 159
Cdd:PRK10510 72 ALGGGVGYYMDVQEAKLRDKMRGTGVSVTRSGDNIILNMPNNVTFDSSSATLKPAGANTLTGVAMVLKEYPKTAVNVVGY 151
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1051752658 160 TDSTGSRQLNMDLSQRRAQSVANYLTSQGVSAANLSARGAGPDNPIASNADVNGRAQNRRVEVNLGPI 227
Cdd:PRK10510 152 TDSTGSHDLNMRLSQQRADSVASALITQGVDASRIRTQGMGPANPIASNSTAEGKAQNRRVEITLSPL 219
|
|
| OmpA_C-like |
cd07185 |
Peptidoglycan binding domains similar to the C-terminal domain of outer-membrane protein OmpA; ... |
121-224 |
9.12e-43 |
|
Peptidoglycan binding domains similar to the C-terminal domain of outer-membrane protein OmpA; OmpA-like domains (named after the C-terminal domain of Escherichia coli OmpA protein) have been shown to non-covalently associate with peptidoglycan, a network of glycan chains composed of disaccharides, which are crosslinked via short peptide bridges. Well-studied members of this family include the Escherichia coli outer membrane protein OmpA, the Escherichia coli lipoprotein PAL, Neisseria meningitdis RmpM, which interact with the outer membrane, as well as the Escherichia coli motor protein MotB, and the Vibrio flagellar motor proteins PomB and MotY, which interact with the inner membrane.
Pssm-ID: 143586 [Multi-domain] Cd Length: 106 Bit Score: 141.15 E-value: 9.12e-43
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1051752658 121 NITFATNSDAISSSFYQPLNNLANSLKQFNQNTIQIVGYTDSTGSRQLNMDLSQRRAQSVANYLTSQGVSAANLSARGAG 200
Cdd:cd07185 3 TIYFDFGSAELTPEAKPLLDKLAEVLKKNPDAKIRIEGHTDSRGSDAYNQELSERRAEAVADYLVSKGVDASRITAVGYG 82
|
90 100
....*....|....*....|....
gi 1051752658 201 PDNPIASNADVNGRAQNRRVEVNL 224
Cdd:cd07185 83 ESRPIASNDTEEGRAKNRRVEIVI 106
|
|
| OmpA |
COG2885 |
Outer membrane protein OmpA and related peptidoglycan-associated (lipo)proteins [Cell wall ... |
112-226 |
7.76e-41 |
|
Outer membrane protein OmpA and related peptidoglycan-associated (lipo)proteins [Cell wall/membrane/envelope biogenesis];
Pssm-ID: 442131 [Multi-domain] Cd Length: 294 Bit Score: 142.23 E-value: 7.76e-41
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1051752658 112 DQIKLIMPGNITFATNSDAISSSFYQPLNNLANSLKQFNQNTIQIVGYTDSTGSRQLNMDLSQRRAQSVANYLTSQGVSA 191
Cdd:COG2885 179 AVAEVVLLSNVYFDFDSAELTPEAKAALDELAALLKENPDLRIEIEGHTDSRGSDAYNLALSERRAEAVKDYLVSKGIPA 258
|
90 100 110
....*....|....*....|....*....|....*
gi 1051752658 192 ANLSARGAGPDNPIASNADVNGRAQNRRVEVNLGP 226
Cdd:COG2885 259 SRITAVGYGESRPVASNDTEEGRAKNRRVEIVVLK 293
|
|
| type_VI_ompA |
TIGR03350 |
type VI secretion system peptidoglycan-associated domain; The flagellar motor protein MotB, ... |
105-222 |
3.43e-23 |
|
type VI secretion system peptidoglycan-associated domain; The flagellar motor protein MotB, the Gram-negative bacterial outer membrane protein OmpA (with an N-terminal outer membrane beta barrel domain) share a C-terminal peptidoglycan-associating homology region. This model describes a domain found fused to type VI secretion system homologs of the type IV system protein DotU (see model TIGR03349), with OmpA/MotB homology. [Protein fate, Protein and peptide secretion and trafficking, Cellular processes, Pathogenesis]
Pssm-ID: 274533 [Multi-domain] Cd Length: 137 Bit Score: 91.59 E-value: 3.43e-23
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1051752658 105 VEVQRQGDQIKLIMPGNITFATNSDAISSSFYQPLNNLANSLKQfNQNTIQIVGYTDSTGSRQL----NMDLSQRRAQSV 180
Cdd:TIGR03350 15 LTVDEDGDRSVVRLRGDELFASGSAEVRAEFEPLLLRIAKALAA-VPGRITVVGHTDNVPIRTArfpsNWHLSEARAKAV 93
|
90 100 110 120
....*....|....*....|....*....|....*....|..
gi 1051752658 181 ANYLTSQGVSAANLSARGAGPDNPIASNADVNGRAQNRRVEV 222
Cdd:TIGR03350 94 ADVLAQAGGPAGRVRAEGRGDSEPIASNATAAGRARNRRVEI 135
|
|
| OmpA |
pfam00691 |
OmpA family; The Pfam entry also includes MotB and related proteins which are not included in ... |
124-217 |
6.08e-22 |
|
OmpA family; The Pfam entry also includes MotB and related proteins which are not included in the Prosite family.
Pssm-ID: 425825 [Multi-domain] Cd Length: 95 Bit Score: 87.03 E-value: 6.08e-22
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1051752658 124 FATNSDAISSSFYQPLNNLANSLKQFNQ-NTIQIVGYTDSTGSRQLNMDLSQRRAQSVANYLTSQGVSAANLSARGAGPD 202
Cdd:pfam00691 1 FDPGSSQLTPKAKATLDEIADLLKFPELkNTITIEGHTDTVGSAAYNWELSQRRAEAVRRYLVNFGVPPSRISVVGYGAT 80
|
90
....*....|....*
gi 1051752658 203 NPIASNADVNGRAQN 217
Cdd:pfam00691 81 KPITDNKTPEGRARN 95
|
|
| |
|
Name |
Accession |
Description |
Interval |
E-value |
| PRK10510 |
PRK10510 |
OmpA family lipoprotein; |
5-227 |
1.50e-53 |
|
OmpA family lipoprotein;
Pssm-ID: 182507 [Multi-domain] Cd Length: 219 Bit Score: 172.37 E-value: 1.50e-53
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1051752658 5 RRLLVVATAVAL---LSGCASpNPYDGSQ--GQAGNGSESGMSKTAKYGGLGALAGAlagaaidhnhRGKGALIGAVVAG 79
Cdd:PRK10510 3 KRVYLIAAVVSGalaVSGCTT-NPYTGEReaGKSGIGAGIGSLVGAGIGALSSSKKD----------RGKGALIGAAAGA 71
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1051752658 80 AGAAGYGYYADQQEKKLRESMANTGVEVQRQGDQIKLIMPGNITFATNSDAISSSFYQPLNNLANSLKQFNQNTIQIVGY 159
Cdd:PRK10510 72 ALGGGVGYYMDVQEAKLRDKMRGTGVSVTRSGDNIILNMPNNVTFDSSSATLKPAGANTLTGVAMVLKEYPKTAVNVVGY 151
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1051752658 160 TDSTGSRQLNMDLSQRRAQSVANYLTSQGVSAANLSARGAGPDNPIASNADVNGRAQNRRVEVNLGPI 227
Cdd:PRK10510 152 TDSTGSHDLNMRLSQQRADSVASALITQGVDASRIRTQGMGPANPIASNSTAEGKAQNRRVEITLSPL 219
|
|
| OmpA_C-like |
cd07185 |
Peptidoglycan binding domains similar to the C-terminal domain of outer-membrane protein OmpA; ... |
121-224 |
9.12e-43 |
|
Peptidoglycan binding domains similar to the C-terminal domain of outer-membrane protein OmpA; OmpA-like domains (named after the C-terminal domain of Escherichia coli OmpA protein) have been shown to non-covalently associate with peptidoglycan, a network of glycan chains composed of disaccharides, which are crosslinked via short peptide bridges. Well-studied members of this family include the Escherichia coli outer membrane protein OmpA, the Escherichia coli lipoprotein PAL, Neisseria meningitdis RmpM, which interact with the outer membrane, as well as the Escherichia coli motor protein MotB, and the Vibrio flagellar motor proteins PomB and MotY, which interact with the inner membrane.
Pssm-ID: 143586 [Multi-domain] Cd Length: 106 Bit Score: 141.15 E-value: 9.12e-43
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1051752658 121 NITFATNSDAISSSFYQPLNNLANSLKQFNQNTIQIVGYTDSTGSRQLNMDLSQRRAQSVANYLTSQGVSAANLSARGAG 200
Cdd:cd07185 3 TIYFDFGSAELTPEAKPLLDKLAEVLKKNPDAKIRIEGHTDSRGSDAYNQELSERRAEAVADYLVSKGVDASRITAVGYG 82
|
90 100
....*....|....*....|....
gi 1051752658 201 PDNPIASNADVNGRAQNRRVEVNL 224
Cdd:cd07185 83 ESRPIASNDTEEGRAKNRRVEIVI 106
|
|
| OmpA |
COG2885 |
Outer membrane protein OmpA and related peptidoglycan-associated (lipo)proteins [Cell wall ... |
112-226 |
7.76e-41 |
|
Outer membrane protein OmpA and related peptidoglycan-associated (lipo)proteins [Cell wall/membrane/envelope biogenesis];
Pssm-ID: 442131 [Multi-domain] Cd Length: 294 Bit Score: 142.23 E-value: 7.76e-41
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1051752658 112 DQIKLIMPGNITFATNSDAISSSFYQPLNNLANSLKQFNQNTIQIVGYTDSTGSRQLNMDLSQRRAQSVANYLTSQGVSA 191
Cdd:COG2885 179 AVAEVVLLSNVYFDFDSAELTPEAKAALDELAALLKENPDLRIEIEGHTDSRGSDAYNLALSERRAEAVKDYLVSKGIPA 258
|
90 100 110
....*....|....*....|....*....|....*
gi 1051752658 192 ANLSARGAGPDNPIASNADVNGRAQNRRVEVNLGP 226
Cdd:COG2885 259 SRITAVGYGESRPVASNDTEEGRAKNRRVEIVVLK 293
|
|
| MotB |
COG1360 |
Flagellar motor protein MotB [Cell motility]; |
95-224 |
1.79e-29 |
|
Flagellar motor protein MotB [Cell motility];
Pssm-ID: 440971 [Multi-domain] Cd Length: 174 Bit Score: 109.16 E-value: 1.79e-29
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1051752658 95 KLRESMANTGVEVQRQGDQIKLIMPGNITFATNSDAISSSFYQPLNNLANSLKQFNqNTIQIVGYTDS----TGSRQLNM 170
Cdd:COG1360 34 ALEENLLSGQVEVRITEEGLVIEIQDRVLFDSGSAELTPEGRELLDKIAAVLAEVP-NRIRVEGHTDNvpisTARFPSNW 112
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|....
gi 1051752658 171 DLSQRRAQSVANYLTSQGVSAANLSARGAGPDNPIASNADVNGRAQNRRVEVNL 224
Cdd:COG1360 113 ELSAARAAAVVRYLIEGGVPPERLSAVGYGDTRPLAPNDTPEGRARNRRVEIVI 166
|
|
| type_VI_ompA |
TIGR03350 |
type VI secretion system peptidoglycan-associated domain; The flagellar motor protein MotB, ... |
105-222 |
3.43e-23 |
|
type VI secretion system peptidoglycan-associated domain; The flagellar motor protein MotB, the Gram-negative bacterial outer membrane protein OmpA (with an N-terminal outer membrane beta barrel domain) share a C-terminal peptidoglycan-associating homology region. This model describes a domain found fused to type VI secretion system homologs of the type IV system protein DotU (see model TIGR03349), with OmpA/MotB homology. [Protein fate, Protein and peptide secretion and trafficking, Cellular processes, Pathogenesis]
Pssm-ID: 274533 [Multi-domain] Cd Length: 137 Bit Score: 91.59 E-value: 3.43e-23
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1051752658 105 VEVQRQGDQIKLIMPGNITFATNSDAISSSFYQPLNNLANSLKQfNQNTIQIVGYTDSTGSRQL----NMDLSQRRAQSV 180
Cdd:TIGR03350 15 LTVDEDGDRSVVRLRGDELFASGSAEVRAEFEPLLLRIAKALAA-VPGRITVVGHTDNVPIRTArfpsNWHLSEARAKAV 93
|
90 100 110 120
....*....|....*....|....*....|....*....|..
gi 1051752658 181 ANYLTSQGVSAANLSARGAGPDNPIASNADVNGRAQNRRVEV 222
Cdd:TIGR03350 94 ADVLAQAGGPAGRVRAEGRGDSEPIASNATAAGRARNRRVEI 135
|
|
| OmpA |
pfam00691 |
OmpA family; The Pfam entry also includes MotB and related proteins which are not included in ... |
124-217 |
6.08e-22 |
|
OmpA family; The Pfam entry also includes MotB and related proteins which are not included in the Prosite family.
Pssm-ID: 425825 [Multi-domain] Cd Length: 95 Bit Score: 87.03 E-value: 6.08e-22
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1051752658 124 FATNSDAISSSFYQPLNNLANSLKQFNQ-NTIQIVGYTDSTGSRQLNMDLSQRRAQSVANYLTSQGVSAANLSARGAGPD 202
Cdd:pfam00691 1 FDPGSSQLTPKAKATLDEIADLLKFPELkNTITIEGHTDTVGSAAYNWELSQRRAEAVRRYLVNFGVPPSRISVVGYGAT 80
|
90
....*....|....*
gi 1051752658 203 NPIASNADVNGRAQN 217
Cdd:pfam00691 81 KPITDNKTPEGRARN 95
|
|
| pdsO |
TIGR03789 |
proteobacterial sortase system peptidoglycan-associated protein; A newly defined histidine ... |
91-220 |
1.61e-17 |
|
proteobacterial sortase system peptidoglycan-associated protein; A newly defined histidine kinase (TIGR03785) and response regulator (TIGR03787) gene pair occurs exclusively in Proteobacteria, mostly of marine origin, nearly all of which contain a subfamily 6 sortase (TIGR03784) and its single dedicated target protein (TIGR03788) adjacent to to the sortase. This protein family shows up in only in those species with the histidine kinase/response regulator gene pair, and often adjacent to that pair. It belongs to the pfam00691 domain family, which is the peptidoglycan-associated region of flagellar motor protein MotB, OmpA (whose N-terminal region forms an outer membrane beta barrel), and peptidoglycan-associated lipoprotein Pal. Its function is unknown. We assign the gene symbol pdsO, for Proteobacterial Dedicated Sortase system OmpA family protein. [Protein fate, Protein and peptide secretion and trafficking]
Pssm-ID: 274783 [Multi-domain] Cd Length: 243 Bit Score: 79.08 E-value: 1.61e-17
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1051752658 91 QQEKKLRESMANTGVEVQRQGDQIKLIMPG-NITFATNSDAISSSFYQPLNNLANSLKQFNQNTIQIVGYTDSTGSRQLN 169
Cdd:TIGR03789 109 QLEAEYQQAQVHLETLQQDQQQLLEELALGmNVQFRTGSSDIEPHFQPQLDEVATLMKQSPELKLDLSGYADRRGDSQYN 188
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|.
gi 1051752658 170 MDLSQRRAQSVANYLTSQGVSAANLSARGAGPDNPIASNADVNGRAQNRRV 220
Cdd:TIGR03789 189 QALSEQRVLEVRSYLIKQGVDEARLTTQAFGESAPLKDEQESESDFFDRRV 239
|
|
| PRK07033 |
PRK07033 |
DotU family type VI secretion system protein; |
96-230 |
3.20e-16 |
|
DotU family type VI secretion system protein;
Pssm-ID: 180801 [Multi-domain] Cd Length: 427 Bit Score: 77.40 E-value: 3.20e-16
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1051752658 96 LRESMANTGVEVQRQGDQIKLIMPGNITFATNSDAISSSFYQPLNNLANSLKQFNQNtIQIVGYTDSTGSRQL----NMD 171
Cdd:PRK07033 290 LEPEIRAGLVAVRDEADRSVVTLRGDGLFASASTSVRDRYQPVLARVADALNQVKGN-VLVTGYSDNVPIRTArfpsNWE 368
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|....*....
gi 1051752658 172 LSQRRAQSVANYLTSQGVSAANLSARGAGPDNPIASNADVNGRAQNRRVEVNLGPIPGQ 230
Cdd:PRK07033 369 LSQARAQAVRALLAARLGQPERVTAEGRGDSDPVAPNDSAENRARNRRVEITLLVAPGS 427
|
|
| motB |
PRK08457 |
flagellar motor protein MotB; Reviewed |
91-222 |
4.26e-16 |
|
flagellar motor protein MotB; Reviewed
Pssm-ID: 181435 [Multi-domain] Cd Length: 257 Bit Score: 75.52 E-value: 4.26e-16
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1051752658 91 QQEKKLRESMANTGVEVQRQgDQIKLIMPGNITFATNS-DAISSSFYQPLNNLANSLKQFNQNT-IQIVGYTDST---GS 165
Cdd:PRK08457 94 TQQETIERRKGEGGALDQID-NGIALKLPSKLLFENGSaEIINADMMDYLKRIAKIITKLPKQVkINVRGYTDNSplnKS 172
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|....*...
gi 1051752658 166 R-QLNMDLSQRRAQSVANYLTSQGVSAANLSARGAGPDNPIASNADVNGRAQNRRVEV 222
Cdd:PRK08457 173 RyKDHYELAAARAYNVMKVLIQYGINPNRLSFSSYGSNNPIAPNDSLENRLKNNRVEI 230
|
|
| PRK10808 |
PRK10808 |
outer membrane protein A; Reviewed |
137-224 |
6.09e-16 |
|
outer membrane protein A; Reviewed
Pssm-ID: 236764 [Multi-domain] Cd Length: 351 Bit Score: 76.27 E-value: 6.09e-16
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1051752658 137 QPLNNLANSLKQFN--QNTIQIVGYTDSTGSRQLNMDLSQRRAQSVANYLTSQGVSAANLSARGAGPDNPIASN--ADVN 212
Cdd:PRK10808 241 QALDQLYSQLSNLDpkDGSVVVLGYTDRIGSDAYNQGLSEKRAQSVVDYLVSKGIPADKISARGMGKSNPVTGNtcDNVK 320
|
90
....*....|....*....
gi 1051752658 213 GR-------AQNRRVEVNL 224
Cdd:PRK10808 321 PRaalidclAPDRRVEIEV 339
|
|
| PRK09040 |
PRK09040 |
hypothetical protein; Provisional |
120-228 |
1.11e-15 |
|
hypothetical protein; Provisional
Pssm-ID: 181620 [Multi-domain] Cd Length: 214 Bit Score: 73.51 E-value: 1.11e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1051752658 120 GNITFATNSDAISSSFYQPLNNLANSLKQF---NQNTIQIVGYTD----STGSRQL--NMDLSQRRAQSVANYLTSQGVS 190
Cdd:PRK09040 88 GSVLFALNSDQLQPEGRELLKSLAGPLAAYlraRDEILMVSGFTDdqpvRAGNRRFadNWELSAQRALTVTRALIDAGVP 167
|
90 100 110
....*....|....*....|....*....|....*...
gi 1051752658 191 AANLSARGAGPDNPIASNADVNGRAQNRRVEvnLGPIP 228
Cdd:PRK09040 168 ASSVFAAAFGSEQPVASNADDEGRAKNRRVE--IAPVP 203
|
|
| PRK08126 |
PRK08126 |
hypothetical protein; Provisional |
156-222 |
3.80e-14 |
|
hypothetical protein; Provisional
Pssm-ID: 236157 [Multi-domain] Cd Length: 432 Bit Score: 71.26 E-value: 3.80e-14
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1051752658 156 IVGYTDST--GSRQL--NMDLSQRRAQSVANYLTSQGVSAANLSARGAGPDNPIASNADVNGRAQNRRVEV 222
Cdd:PRK08126 358 VTGHTDNQpiRSAQFasNLVLSEKRAAQVAQMLQSAGVPASRLEAVGKGDAQPVADNRTPQGRAQNRRVEI 428
|
|
| PRK09038 |
PRK09038 |
flagellar motor protein MotD; Reviewed |
105-222 |
8.86e-14 |
|
flagellar motor protein MotD; Reviewed
Pssm-ID: 181618 [Multi-domain] Cd Length: 281 Bit Score: 69.27 E-value: 8.86e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1051752658 105 VEVQRQGDQIKLIMPGNITFATNSDAISSSFYQPLNNLANSLKQFnQNTIQIVGYTD----STGSRQLNMDLSQRRAQSV 180
Cdd:PRK09038 118 VTVRRNELWIEIEINSSLLFGSGDAMLSDQAFAILEKVAEVLKPA-PNPIHVEGFTDnvpiATAQFPSNWELSAARAASV 196
|
90 100 110 120
....*....|....*....|....*....|....*....|..
gi 1051752658 181 ANYLTSQGVSAANLSARGAGPDNPIASNADVNGRAQNRRVEV 222
Cdd:PRK09038 197 VRLLADDGVAPSRLAAVGYGEFQPVADNDTAEGRARNRRVVL 238
|
|
| motB |
PRK08944 |
flagellar motor protein MotB; Reviewed |
93-224 |
2.88e-11 |
|
flagellar motor protein MotB; Reviewed
Pssm-ID: 236356 [Multi-domain] Cd Length: 302 Bit Score: 62.33 E-value: 2.88e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1051752658 93 EKKLRESMANTGVEVQRQGDQIKLIMPGNITFATNSDAISSSFYQPLNNLANSLKQFnQNTIQIVGYTD----STGSRQL 168
Cdd:PRK08944 152 AQQLEKEIEDGAIEIESLGQQIIIRIREKGSFPSGSAFLQPKFKPVVRKIGELLKDV-PGIITVSGHTDnvpiSSELYRS 230
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|....*..
gi 1051752658 169 NMDLSQRRAQSVANYLTS-QGVSAANLSARGAGPDNPIASNADVNGRAQNRRVEVNL 224
Cdd:PRK08944 231 NWDLSSARAVAVAHELLKvKGFDPQRLKVVGMADTQPLVPNDTAENRARNRRVEIII 287
|
|
| PRK09967 |
PRK09967 |
OmpA family protein; |
121-226 |
5.98e-11 |
|
OmpA family protein;
Pssm-ID: 182172 [Multi-domain] Cd Length: 160 Bit Score: 59.22 E-value: 5.98e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1051752658 121 NITFATNSDAISSSFYQPLNNLANSLKQFNQNTIQIVGYTDSTGSRQLNMDLSQRRAQSVAN-YLTSQGVSAANLSARGA 199
Cdd:PRK09967 53 AILFAKNDYKLLPESQQQIQTMAAKLASTGLTHARMDGHTDNYGEDSYNEGLSLKRANVVADaWAMGGQIPRSNLTTQGL 132
|
90 100
....*....|....*....|....*..
gi 1051752658 200 GPDNPIASNADVNGRAQNRRVEVNLGP 226
Cdd:PRK09967 133 GKKYPIASNKTAQGRAENRRVAVVITT 159
|
|
| PRK09039 |
PRK09039 |
peptidoglycan -binding protein; |
124-224 |
1.05e-10 |
|
peptidoglycan -binding protein;
Pssm-ID: 181619 [Multi-domain] Cd Length: 343 Bit Score: 60.75 E-value: 1.05e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1051752658 124 FATNSDAISSSFYQPLNNLANSLKQFNQN-------TIQIVGYTD-----STGSRQLNMDLSQRRAQSVANYLTSQGVSA 191
Cdd:PRK09039 228 FPTGSAELNPEGQAEIAKLAAALIELAKEippeinwVLRVDGHTDnvplsGTGRFRDNWELSSARAISVVKFLIALGVPA 307
|
90 100 110
....*....|....*....|....*....|...
gi 1051752658 192 ANLSARGAGPDNPIASNADVNGRAQNRRVEVNL 224
Cdd:PRK09039 308 DRLAAAGFGEFQPLDPGDTPEARARNRRIELKL 340
|
|
| PRK10802 |
PRK10802 |
peptidoglycan-associated lipoprotein Pal; |
131-219 |
1.53e-07 |
|
peptidoglycan-associated lipoprotein Pal;
Pssm-ID: 182744 [Multi-domain] Cd Length: 173 Bit Score: 49.87 E-value: 1.53e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1051752658 131 ISSSFYQPLNNLANSLKQFNQNTIQIVGYTDSTGSRQLNMDLSQRRAQSVANYLTSQGVSAANLSARGAGPDNPIASNAD 210
Cdd:PRK10802 80 IRSDFAQMLDAHANFLRSNPSYKVTVEGHADERGTPEYNIALGERRANAVKMYLQGKGVSADQISIVSYGKEKPAVLGHD 159
|
....*....
gi 1051752658 211 VNGRAQNRR 219
Cdd:PRK10802 160 EAAYAKNRR 168
|
|
| motB |
PRK07734 |
flagellar motor protein MotB; Reviewed |
154-227 |
5.99e-07 |
|
flagellar motor protein MotB; Reviewed
Pssm-ID: 236080 [Multi-domain] Cd Length: 259 Bit Score: 49.36 E-value: 5.99e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1051752658 154 IQIVGYTDSTGSR----QLNMDLSQRRAqsvANY----LTSQGVSAANLSARGAGPDNPIASNADVNGRAQNRRVEVNLG 225
Cdd:PRK07734 176 ITISGHTDNVPIAnaqfASNWELSVMRA---VNFmqvlLENKELDPEKFSAKGYGEYKPIASNDTAEGRAKNRRVEVLIL 252
|
..
gi 1051752658 226 PI 227
Cdd:PRK07734 253 PL 254
|
|
| PRK06925 |
PRK06925 |
flagellar motor protein MotB; |
152-222 |
5.40e-06 |
|
flagellar motor protein MotB;
Pssm-ID: 235887 [Multi-domain] Cd Length: 230 Bit Score: 46.30 E-value: 5.40e-06
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1051752658 152 NTIQIVGYTDS----TGSRQLNMDLSQRRAQSVANYLTS-QGVSAANLSARGAGPDNPIASNADVNGRAQNRRVEV 222
Cdd:PRK06925 149 NDIKVEGHTDSrpisTYRYPSNWELSAARASSVIRYFTSkEKLDSSRFIAVGYADTKPVVPNTTEENMQENRRVEI 224
|
|
| PRK06742 |
PRK06742 |
flagellar motor protein MotS; Reviewed |
90-220 |
2.10e-05 |
|
flagellar motor protein MotS; Reviewed
Pssm-ID: 102525 [Multi-domain] Cd Length: 225 Bit Score: 44.28 E-value: 2.10e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1051752658 90 DQQEKKLRESMANTG---VEVQRQGDQIKLIMPGNITFATNSDAISSSFYQPLNNLANSLkQFNQNTIQIVGYTDSTGSR 166
Cdd:PRK06742 82 DELYKKLKAYVDNNGisqVNVYREDTGVSVVIVDNLIFDTGDANVKPEAKEIISQLVGFF-QSVPNPIVVEGHTDSRPIH 160
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|....*....
gi 1051752658 167 QL----NMDLSQRRAQSVANYLTS-QGVSAANLSARGAGPDNPIASNADVNGRAQNRRV 220
Cdd:PRK06742 161 NDkfpsNWELSSARAANMIHHLIEvYNVDDKRLAAVGYADTKPVVPNDSPQNWEKNRRV 219
|
|
| motB |
PRK06667 |
flagellar motor protein MotB; Validated |
139-222 |
3.15e-05 |
|
flagellar motor protein MotB; Validated
Pssm-ID: 180652 [Multi-domain] Cd Length: 252 Bit Score: 44.01 E-value: 3.15e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1051752658 139 LNNLANSLKQFnqntiQIVGYTDST-----GSRQLNMDLSQRRAQSVANYLTSQGV-SAANLSARGAGPDNPIASNADVN 212
Cdd:PRK06667 152 IGFLDLAGRNF-----RIEGHTDNVdvnpeGPWKSNWELSGARAVNMLEYILNYGDqSESWFQVSGFAGSRPLATEDTPE 226
|
90
....*....|
gi 1051752658 213 GRAQNRRVEV 222
Cdd:PRK06667 227 GRAYNRRIDI 236
|
|
| PRK07034 |
PRK07034 |
hypothetical protein; Provisional |
105-222 |
1.70e-04 |
|
hypothetical protein; Provisional
Pssm-ID: 168775 [Multi-domain] Cd Length: 536 Bit Score: 42.47 E-value: 1.70e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1051752658 105 VEVQRQGDQIKLIMPGNITFATNSDAISSSFYQPLN--NLANSLKQFNQNtIQIVGYTDSTGSRQL----NMDLSQRRAQ 178
Cdd:PRK07034 379 LEVRKDPRGWLLIFTSDGAFRTGEATLSEEFINKKNieRLGLALAPWPGD-IEVIGHTDNKPFRSTsgnnNLKLSAARAS 457
|
90 100 110 120
....*....|....*....|....*....|....*....|....*...
gi 1051752658 179 SVANYLTSQG----VSAANLSARGAGPDNPIASNADVNGRAQNRRVEV 222
Cdd:PRK07034 458 VVADKLRESTqineTHQREISAIGRGESDPLADNATEEGRKRNRRVDI 505
|
|
| |
