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MULTISPECIES: rhamnogalacturonan acetylesterase [Pseudoalteromonas]

Protein Classification

rhamnogalacturonan acetylesterase( domain architecture ID 10110667)

rhamnogalacturonan acetylesterase removes acetyl esters from rhamnogalacturonan substrates, and renders them susceptible to degradation by rhamnogalacturonases; belongs to the SGNH/GDSL hydrolase family

Graphical summary

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List of domain hits

Name Accession Description Interval E-value
Rhamnogalacturan_acetylesterase_like cd01821
Rhamnogalacturan_acetylesterase_like subgroup of SGNH-hydrolases. Rhamnogalacturan ...
25-234 6.35e-85

Rhamnogalacturan_acetylesterase_like subgroup of SGNH-hydrolases. Rhamnogalacturan acetylesterase removes acetyl esters from rhamnogalacturonan substrates, and renders them susceptible to degradation by rhamnogalacturonases. Rhamnogalacturonans are highly branched regions in pectic polysaccharides, consisting of repeating -(1,2)-L-Rha-(1,4)-D-GalUA disaccharide units, with many rhamnose residues substituted by neutral oligosaccharides such as arabinans, galactans and arabinogalactans. Extracellular enzymes participating in the degradation of plant cell wall polymers, such as Rhamnogalacturonan acetylesterase, would typically be found in saprophytic and plant pathogenic fungi and bacteria.


:

Pssm-ID: 238859  Cd Length: 198  Bit Score: 251.36  E-value: 6.35e-85
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1053177521  25 INVFMAGDSTMSIKEvKDYPETGWGMPFQYFFNDQVQVINLAKNGRSTRTFKSEGRWQMIMDEIKPGDYVIIQFGHNDQs 104
Cdd:cd01821     1 PTIFLAGDSTVADYD-PGAPQAGWGQALPQYLDTGITVVNHAKGGRSSRSFRDEGRWDAILKLIKPGDYVLIQFGHNDQ- 78
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1053177521 105 KQKVDRYT-SVPDFKANLLGFIKDVREKQAHPLLMTPITRRYFNEDGTIKETHPLYADAVRDVAKQTKVDFIDMEAITKR 183
Cdd:cd01821    79 KPKDPEYTePYTTYKEYLRRYIAEARAKGATPILVTPVTRRTFDEGGKVEDTLGDYPAAMRELAAEEGVPLIDLNAASRA 158
                         170       180       190       200       210
                  ....*....|....*....|....*....|....*....|....*....|.
gi 1053177521 184 YFQALGDDGSALRFmhiapdlhpnyPLGVTDDTHLNQLGATEVAQLVLTEL 234
Cdd:cd01821   159 LYEAIGPEKSKKYF-----------PEGPGDNTHFSEKGADVVARLVAEEL 198
 
Name Accession Description Interval E-value
Rhamnogalacturan_acetylesterase_like cd01821
Rhamnogalacturan_acetylesterase_like subgroup of SGNH-hydrolases. Rhamnogalacturan ...
25-234 6.35e-85

Rhamnogalacturan_acetylesterase_like subgroup of SGNH-hydrolases. Rhamnogalacturan acetylesterase removes acetyl esters from rhamnogalacturonan substrates, and renders them susceptible to degradation by rhamnogalacturonases. Rhamnogalacturonans are highly branched regions in pectic polysaccharides, consisting of repeating -(1,2)-L-Rha-(1,4)-D-GalUA disaccharide units, with many rhamnose residues substituted by neutral oligosaccharides such as arabinans, galactans and arabinogalactans. Extracellular enzymes participating in the degradation of plant cell wall polymers, such as Rhamnogalacturonan acetylesterase, would typically be found in saprophytic and plant pathogenic fungi and bacteria.


Pssm-ID: 238859  Cd Length: 198  Bit Score: 251.36  E-value: 6.35e-85
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1053177521  25 INVFMAGDSTMSIKEvKDYPETGWGMPFQYFFNDQVQVINLAKNGRSTRTFKSEGRWQMIMDEIKPGDYVIIQFGHNDQs 104
Cdd:cd01821     1 PTIFLAGDSTVADYD-PGAPQAGWGQALPQYLDTGITVVNHAKGGRSSRSFRDEGRWDAILKLIKPGDYVLIQFGHNDQ- 78
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1053177521 105 KQKVDRYT-SVPDFKANLLGFIKDVREKQAHPLLMTPITRRYFNEDGTIKETHPLYADAVRDVAKQTKVDFIDMEAITKR 183
Cdd:cd01821    79 KPKDPEYTePYTTYKEYLRRYIAEARAKGATPILVTPVTRRTFDEGGKVEDTLGDYPAAMRELAAEEGVPLIDLNAASRA 158
                         170       180       190       200       210
                  ....*....|....*....|....*....|....*....|....*....|.
gi 1053177521 184 YFQALGDDGSALRFmhiapdlhpnyPLGVTDDTHLNQLGATEVAQLVLTEL 234
Cdd:cd01821   159 LYEAIGPEKSKKYF-----------PEGPGDNTHFSEKGADVVARLVAEEL 198
TesA COG2755
Lysophospholipase L1 or related esterase. Includes spore coat protein LipC/YcsK [Cell cycle ...
18-235 8.68e-33

Lysophospholipase L1 or related esterase. Includes spore coat protein LipC/YcsK [Cell cycle control, cell division, chromosome partitioning, Lipid transport and metabolism];


Pssm-ID: 442045 [Multi-domain]  Cd Length: 191  Bit Score: 118.21  E-value: 8.68e-33
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1053177521  18 TAQADEQINVFMAGDSTMSikEVKDYPETGWGMPFQ-YFFNDQVQVINLAKNGRSTRTFKSegRWQMIMDEIKPgDYVII 96
Cdd:COG2755     2 KAAAGKPLRIVALGDSITA--GYGASRERGWPALLArRLAAADVRVVNAGISGATTADLLA--RLDRDLLALKP-DLVVI 76
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1053177521  97 QFGHNDQskqKVDRYTSVPDFKANLLGFIKDVREK--QAHPLLMTPITRRYFNEdgtIKETHPLYADAVRDVAKQTKVDF 174
Cdd:COG2755    77 ELGTNDL---LRGLGVSPEEFRANLEALIDRLRAAgpGARVVLVTPPPRLRPNY---LNERIEAYNAAIRELAAEYGVPL 150
                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1053177521 175 IDMeaitkryFQALGDDGSALRFMhiapdlhpnyplgVTDDTHLNQLGATEVAQLVLTELK 235
Cdd:COG2755   151 VDL-------YAALRDAGDLPDLL-------------TADGLHPNAAGYRLIAEAVLPALK 191
Lipase_GDSL_2 pfam13472
GDSL-like Lipase/Acylhydrolase family; This family of presumed lipases and related enzymes are ...
62-207 1.55e-13

GDSL-like Lipase/Acylhydrolase family; This family of presumed lipases and related enzymes are similar to pfam00657.


Pssm-ID: 463889  Cd Length: 176  Bit Score: 66.80  E-value: 1.55e-13
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1053177521  62 VINLAKNGRSTRtFKSEGRWQMImDEIKPgDYVIIQFGHNDqskqkVDRYTSVPDFKANLLGFIKDVREKQAHPLLMT-- 139
Cdd:pfam13472  36 VNNLGISGATTR-LDLLERLDDV-LRLKP-DLVVILLGTND-----LGRGVSAARAAANLEALIDALRAAGPDARVLLig 107
                          90       100       110       120       130       140       150
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1053177521 140 --PITRRYFNEDGTIKETHPLYADAVRDVAKQTKVDFIDMeaitkryFQALGDDGSALRFMHIAPDLHPN 207
Cdd:pfam13472 108 plPVGPPPPLDERRLNARIAEYNAAIREVAAERGVPYVDL-------WDALRDDGGWLPDLLADDGLHPN 170
 
Name Accession Description Interval E-value
Rhamnogalacturan_acetylesterase_like cd01821
Rhamnogalacturan_acetylesterase_like subgroup of SGNH-hydrolases. Rhamnogalacturan ...
25-234 6.35e-85

Rhamnogalacturan_acetylesterase_like subgroup of SGNH-hydrolases. Rhamnogalacturan acetylesterase removes acetyl esters from rhamnogalacturonan substrates, and renders them susceptible to degradation by rhamnogalacturonases. Rhamnogalacturonans are highly branched regions in pectic polysaccharides, consisting of repeating -(1,2)-L-Rha-(1,4)-D-GalUA disaccharide units, with many rhamnose residues substituted by neutral oligosaccharides such as arabinans, galactans and arabinogalactans. Extracellular enzymes participating in the degradation of plant cell wall polymers, such as Rhamnogalacturonan acetylesterase, would typically be found in saprophytic and plant pathogenic fungi and bacteria.


Pssm-ID: 238859  Cd Length: 198  Bit Score: 251.36  E-value: 6.35e-85
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1053177521  25 INVFMAGDSTMSIKEvKDYPETGWGMPFQYFFNDQVQVINLAKNGRSTRTFKSEGRWQMIMDEIKPGDYVIIQFGHNDQs 104
Cdd:cd01821     1 PTIFLAGDSTVADYD-PGAPQAGWGQALPQYLDTGITVVNHAKGGRSSRSFRDEGRWDAILKLIKPGDYVLIQFGHNDQ- 78
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1053177521 105 KQKVDRYT-SVPDFKANLLGFIKDVREKQAHPLLMTPITRRYFNEDGTIKETHPLYADAVRDVAKQTKVDFIDMEAITKR 183
Cdd:cd01821    79 KPKDPEYTePYTTYKEYLRRYIAEARAKGATPILVTPVTRRTFDEGGKVEDTLGDYPAAMRELAAEEGVPLIDLNAASRA 158
                         170       180       190       200       210
                  ....*....|....*....|....*....|....*....|....*....|.
gi 1053177521 184 YFQALGDDGSALRFmhiapdlhpnyPLGVTDDTHLNQLGATEVAQLVLTEL 234
Cdd:cd01821   159 LYEAIGPEKSKKYF-----------PEGPGDNTHFSEKGADVVARLVAEEL 198
TesA COG2755
Lysophospholipase L1 or related esterase. Includes spore coat protein LipC/YcsK [Cell cycle ...
18-235 8.68e-33

Lysophospholipase L1 or related esterase. Includes spore coat protein LipC/YcsK [Cell cycle control, cell division, chromosome partitioning, Lipid transport and metabolism];


Pssm-ID: 442045 [Multi-domain]  Cd Length: 191  Bit Score: 118.21  E-value: 8.68e-33
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1053177521  18 TAQADEQINVFMAGDSTMSikEVKDYPETGWGMPFQ-YFFNDQVQVINLAKNGRSTRTFKSegRWQMIMDEIKPgDYVII 96
Cdd:COG2755     2 KAAAGKPLRIVALGDSITA--GYGASRERGWPALLArRLAAADVRVVNAGISGATTADLLA--RLDRDLLALKP-DLVVI 76
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1053177521  97 QFGHNDQskqKVDRYTSVPDFKANLLGFIKDVREK--QAHPLLMTPITRRYFNEdgtIKETHPLYADAVRDVAKQTKVDF 174
Cdd:COG2755    77 ELGTNDL---LRGLGVSPEEFRANLEALIDRLRAAgpGARVVLVTPPPRLRPNY---LNERIEAYNAAIRELAAEYGVPL 150
                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1053177521 175 IDMeaitkryFQALGDDGSALRFMhiapdlhpnyplgVTDDTHLNQLGATEVAQLVLTELK 235
Cdd:COG2755   151 VDL-------YAALRDAGDLPDLL-------------TADGLHPNAAGYRLIAEAVLPALK 191
Lipase_GDSL_2 pfam13472
GDSL-like Lipase/Acylhydrolase family; This family of presumed lipases and related enzymes are ...
62-207 1.55e-13

GDSL-like Lipase/Acylhydrolase family; This family of presumed lipases and related enzymes are similar to pfam00657.


Pssm-ID: 463889  Cd Length: 176  Bit Score: 66.80  E-value: 1.55e-13
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1053177521  62 VINLAKNGRSTRtFKSEGRWQMImDEIKPgDYVIIQFGHNDqskqkVDRYTSVPDFKANLLGFIKDVREKQAHPLLMT-- 139
Cdd:pfam13472  36 VNNLGISGATTR-LDLLERLDDV-LRLKP-DLVVILLGTND-----LGRGVSAARAAANLEALIDALRAAGPDARVLLig 107
                          90       100       110       120       130       140       150
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1053177521 140 --PITRRYFNEDGTIKETHPLYADAVRDVAKQTKVDFIDMeaitkryFQALGDDGSALRFMHIAPDLHPN 207
Cdd:pfam13472 108 plPVGPPPPLDERRLNARIAEYNAAIREVAAERGVPYVDL-------WDALRDDGGWLPDLLADDGLHPN 170
SGNH_hydrolase cd00229
SGNH_hydrolase, or GDSL_hydrolase, is a diverse family of lipases and esterases. The tertiary ...
27-231 9.26e-13

SGNH_hydrolase, or GDSL_hydrolase, is a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the typical Ser-His-Asp(Glu) triad from other serine hydrolases, but may lack the carboxlic acid.


Pssm-ID: 238141 [Multi-domain]  Cd Length: 187  Bit Score: 64.74  E-value: 9.26e-13
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1053177521  27 VFMAGDSTMSIKEVKDYPETGWGMPF--QYFFNDQVQVINLAKNGRSTRTFKSEGRWQMIMDEIKPgDYVIIQFGHNDQS 104
Cdd:cd00229     1 ILVIGDSITAGYGASSGSTFYSLLLYllLLAGGPGVEVINLGVSGATTADALRRLGLRLALLKDKP-DLVIIELGTNDLG 79
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1053177521 105 KqkvDRYTSVPDFKANLLGFIKDVRE--KQAHPLLMTPITRryFNEDGTIKETHPLYADAVRDVAKQ----TKVDFIDME 178
Cdd:cd00229    80 R---GGDTSIDEFKANLEELLDALREraPGAKVILITPPPP--PPREGLLGRALPRYNEAIKAVAAEnpapSGVDLVDLA 154
                         170       180       190       200       210
                  ....*....|....*....|....*....|....*....|....*....|...
gi 1053177521 179 AITKRYFQALGDDgsalrfmhiapdlhpnyplgvtDDTHLNQLGATEVAQLVL 231
Cdd:cd00229   155 ALLGDEDKSLYSP----------------------DGIHPNPAGHKLIAEALA 185
SGNH_hydrolase_peri1 cd01825
SGNH_peri1; putative periplasmic member of the SGNH-family of hydrolases, a diverse family of ...
60-236 1.94e-11

SGNH_peri1; putative periplasmic member of the SGNH-family of hydrolases, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases.


Pssm-ID: 238863  Cd Length: 189  Bit Score: 61.14  E-value: 1.94e-11
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1053177521  60 VQVINLAKNGRSTRTFKSEGRwQMIMDEIKPGDY--VIIQFGHNDQSKQKVDRytsvPDFKANLLGFIKDVRE--KQAHP 135
Cdd:cd01825    25 VIYDNLGVNGASASLLLKWDA-EFLQAQLAALPPdlVILSYGTNEAFNKQLNA----SEYRQQLREFIKRLRQilPNASI 99
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1053177521 136 LLMTPITRRYFNEDGTIKETHPLYA--DAVRDVAKQTKVDFIDMeaitkryFQALGDDGSALRFMhiapdlhpNYPLGVT 213
Cdd:cd01825   100 LLVGPPDSLQKTGAGRWRTPPGLDAviAAQRRVAKEEGIAFWDL-------YAAMGGEGGIWQWA--------EPGLARK 164
                         170       180
                  ....*....|....*....|...
gi 1053177521 214 DDTHLNQLGATEVAQLVLTELKK 236
Cdd:cd01825   165 DYVHLTPRGYERLANLLYEALLK 187
SGNH_hydrolase_like_2 cd01834
SGNH_hydrolase subfamily. SGNH hydrolases are a diverse family of lipases and esterases. The ...
59-231 1.19e-09

SGNH_hydrolase subfamily. SGNH hydrolases are a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases.


Pssm-ID: 238872  Cd Length: 191  Bit Score: 56.15  E-value: 1.19e-09
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1053177521  59 QVQVINLAKNGRSTRTFKseGRWQMIMDEIKPgDYVIIQFGHNDqSKQKVDRYTSVPDFKANLLGFIKDVREKQAHP--L 136
Cdd:cd01834    33 KLTFRNLGWSGDTVSDLA--ARRDRDVLPAKP-DVVSIMFGIND-SFRGFDDPVGLEKFKTNLRRLIDRLKNKESAPriV 108
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1053177521 137 LMTPITRRYFNEDGTIKETH----PLYADAVRDVAKQTKVDFIDMEAITKRYFQAlgddgsalrfmhiapdlHPNYPLGv 212
Cdd:cd01834   109 LVSPIAYEANEDPLPDGAEYnanlAAYADAVRELAAENGVAFVDLFTPMKEAFQK-----------------AGEAVLT- 170
                         170
                  ....*....|....*....
gi 1053177521 213 TDDTHLNQLGATEVAQLVL 231
Cdd:cd01834   171 VDGVHPNEAGHRALARLWL 189
Isoamyl_acetate_hydrolase_like cd01838
Isoamyl-acetate hydrolyzing esterase-like proteins. SGNH_hydrolase subfamily similar to the ...
45-234 3.29e-07

Isoamyl-acetate hydrolyzing esterase-like proteins. SGNH_hydrolase subfamily similar to the Saccharomyces cerevisiae IAH1. IAH1 may be the major esterase that hydrolyses isoamyl acetate in sake mash. The SGNH-family of hydrolases is a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases


Pssm-ID: 238876  Cd Length: 199  Bit Score: 49.56  E-value: 3.29e-07
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1053177521  45 ETGWGMPFQYFFNDQVQVINLAKNGRSTRTFKSegRWQMIMDEIKPG--DYVIIQFGHNDQSKQKVDRYTSVPDFKANL- 121
Cdd:cd01838    18 EFGFGAALADVYSRKLDVINRGFSGYNTRWALK--VLPKIFLEEKLAqpDLVTIFFGANDAALPGQPQHVPLDEYKENLr 95
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1053177521 122 --LGFIKDVREKQaHPLLMTP-------ITRRYFNEDGTI---KETHPLYADAVRDVAKQTKVDFIDMeaitkryFQALG 189
Cdd:cd01838    96 kiVSHLKSLSPKT-KVILITPppvdeeaWEKSLEDGGSQPgrtNELLKQYAEACVEVAEELGVPVIDL-------WTAMQ 167
                         170       180       190       200
                  ....*....|....*....|....*....|....*....|....*
gi 1053177521 190 DDGSALRFMhiapdlhpnyplgVTDDTHLNQLGATEVAQLVLTEL 234
Cdd:cd01838   168 EEAGWLESL-------------LTDGLHFSSKGYELLFEEIVKVI 199
Lipase_GDSL pfam00657
GDSL-like Lipase/Acylhydrolase;
27-230 4.11e-07

GDSL-like Lipase/Acylhydrolase;


Pssm-ID: 459892 [Multi-domain]  Cd Length: 210  Bit Score: 49.11  E-value: 4.11e-07
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1053177521  27 VFMAGDSTMSIKEVKDYPETGWGMPFQYFFNDQVQV--------INLAKNGRSTRTFKSEGRwQMI-----MDEIKPGDY 93
Cdd:pfam00657   1 IVAFGDSLTDGGGDGPGGRFSWGDLLADFLARKLGVpgsgynhgANFAIGGATIEDLPIQLE-QLLrlisdVKDQAKPDL 79
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1053177521  94 VIIQFGHNDQSKQKVDRYTSVPDFKANLLGFIKDVREKQ----------AHPLLMTPITRRY--FNEDGTikethpLYAD 161
Cdd:pfam00657  80 VTIFIGANDLCNFLSSPARSKKRVPDLLDELRANLPQLGlgarkfwvhgLGPLGCTPPKGCYelYNALAE------EYNE 153
                         170       180       190       200       210       220       230
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1053177521 162 AVRDVAKQTKVDFIDMEAItkryfqalgddgsalrFMHIAPDLHPNYPL----GVTDDTHLNQLGATEVAQLV 230
Cdd:pfam00657 154 RLNELVNSLAAAAEDANVV----------------YVDIYGFEDPTDPCcgigLEPDGLHPSEKGYKAVAEAI 210
sialate_O-acetylesterase_like1 cd01827
sialate O-acetylesterase_like family of the SGNH hydrolases, a diverse family of lipases and ...
36-230 1.21e-04

sialate O-acetylesterase_like family of the SGNH hydrolases, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases.


Pssm-ID: 238865  Cd Length: 188  Bit Score: 41.66  E-value: 1.21e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1053177521  36 SIKEVKDYPETG-WGMPFQYFFNDQVQVINLaknGRSTRTFKSEGRWQ-MIMDEIKP-----GDYVIIQFGHNDqSKQKV 108
Cdd:cd01827     9 SITEGAGLRAYDsYPSPLAQMLGDGYEVGNF---GKSARTVLNKGDHPyMNEERYKNalafnPNIVIIKLGTND-AKPQN 84
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1053177521 109 DRYTSvpDFKANLLGFIKDVREKQAHP--LLMTPITR-----RYFNEDGTIKETHPlyadAVRDVAKQTKVDFIDmeait 181
Cdd:cd01827    85 WKYKD--DFKKDYETMIDSFQALPSKPkiYICYPIPAyygdgGFINDNIIKKEIQP----MIDKIAKKLNLKLID----- 153
                         170       180       190       200
                  ....*....|....*....|....*....|....*....|....*....
gi 1053177521 182 kryfqalgddgsalrfMHIAPDLHPNYplgVTDDTHLNQLGATEVAQLV 230
Cdd:cd01827   154 ----------------LHTPLKGKPEL---VPDWVHPNEKGAYILAKVV 183
Endoglucanase_E_like cd01831
Endoglucanase E-like members of the SGNH hydrolase family; Endoglucanase E catalyzes the ...
92-208 1.51e-04

Endoglucanase E-like members of the SGNH hydrolase family; Endoglucanase E catalyzes the endohydrolysis of 1,4-beta-glucosidic linkages in cellulose, lichenin and cereal beta-D-glucans.


Pssm-ID: 238869  Cd Length: 169  Bit Score: 41.18  E-value: 1.51e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1053177521  92 DYVIIQFGHNDQSKqkvDRYTSVPDFKANLLGFIKDVREK--QAHPLLMTpiTRRYFNEDGTIKETHpLYADAVRDvAKQ 169
Cdd:cd01831    57 DLVVINLGTNDFST---GNNPPGEDFTNAYVEFIEELRKRypDAPIVLML--GPMLFGPYGTEEEIK-RVAEAFKD-QKS 129
                          90       100       110
                  ....*....|....*....|....*....|....*....
gi 1053177521 170 TKVDFIDMEAITKRYFqalgddgsalrfmhIAPDLHPNY 208
Cdd:cd01831   130 KKVHYFDTPGILQHND--------------IGCDWHPTV 154
Lysophospholipase_L1_like cd01822
Lysophospholipase L1-like subgroup of SGNH-hydrolases. The best characterized member in this ...
60-207 1.94e-04

Lysophospholipase L1-like subgroup of SGNH-hydrolases. The best characterized member in this family is TesA, an E. coli periplasmic protein with thioesterase, esterase, arylesterase, protease and lysophospholipase activity.


Pssm-ID: 238860 [Multi-domain]  Cd Length: 177  Bit Score: 40.96  E-value: 1.94e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1053177521  60 VQVINLAKNGRSTrtfkSEG--RWQMIMDEIKPgDYVIIQFGHND----QSKQKVdrytsvpdfKANLLGFIKDVREKQA 133
Cdd:cd01822    37 VTVINAGVSGDTT----AGGlaRLPALLAQHKP-DLVILELGGNDglrgIPPDQT---------RANLRQMIETAQARGA 102
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1053177521 134 HPLLM-----TPITRRYFnedgtiKETHPLYadavRDVAKQTKV----DFIDMEAITKRYFQalgDDGsalrfmhiapdL 204
Cdd:cd01822   103 PVLLVgmqapPNYGPRYT------RRFAAIY----PELAEEYGVplvpFFLEGVAGDPELMQ---SDG-----------I 158

                  ...
gi 1053177521 205 HPN 207
Cdd:cd01822   159 HPN 161
SGNH_hydrolase_like_3 cd01835
SGNH_hydrolase subfamily. SGNH hydrolases are a diverse family of lipases and esterases. The ...
94-231 2.43e-04

SGNH_hydrolase subfamily. SGNH hydrolases are a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases.


Pssm-ID: 238873  Cd Length: 193  Bit Score: 40.78  E-value: 2.43e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1053177521  94 VIIQFGHNDQSKQKVDRYTSVPDFKANLLGFIkDVREKQAHPLL---MTPI---TRRYFNEDGTikethpLYADAVRDVA 167
Cdd:cd01835    73 LVLSVGLNDTARGGRKRPQLSARAFLFGLNQL-LEEAKRLVPVLvvgPTPVdeaKMPYSNRRIA------RLETAFAEVC 145
                          90       100       110       120       130       140
                  ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1053177521 168 KQTKVDFIDMeaitkryFQALGDDGSALRfmHIAPdlhpnyplgvTDDTHLNQLGATEVAQLVL 231
Cdd:cd01835   146 LRRDVPFLDT-------FTPLLNHPQWRR--ELAA----------TDGIHPNAAGYGWLAWLVL 190
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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