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Conserved domains on  [gi|1056041035|ref|WP_067568987|]
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preprotein translocase subunit SecG [Candidatus Mikella endobia]

Protein Classification

preprotein translocase subunit SecG( domain architecture ID 10003479)

preprotein translocase subunit SecG is involved in protein export and participates in an early event of protein translocation

Gene Symbol:  secG
Gene Ontology:  GO:0043952|GO:0009306|GO:0015450|GO:0005886
PubMed:  15546659|10732681|10066476|9184221
SCOP:  4004237

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
SecG COG1314
Protein translocase subunit SecG [Intracellular trafficking, secretion, and vesicular ...
 1-83 3.09e-08

Protein translocase subunit SecG [Intracellular trafficking, secretion, and vesicular transport];


:

Pssm-ID: 440925  Cd Length: 91  Bit Score: 46.72  E-value: 3.09e-08
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1056041035   1 MYRFLLVIFLVISIVLIILIMLQQIKGADVKTS--SSVGSTIFSFKTYNKFVTSITFILATLVFVLSLILGNISNKYSKK 78
Cdd:COG1314     1 MYTVLLVLHVIVAILLIGLVLLQSGKGAGLGAAfgGGASGTLFGARGAANFLTRATAILAVLFFVLSLVLAYLASRGSSA 80


                  ....*
gi 1056041035  79 INGTD 83
Cdd:COG1314    81 SSVLD 85
 
Name Accession Description Interval E-value
SecG COG1314
Protein translocase subunit SecG [Intracellular trafficking, secretion, and vesicular ...
 1-83 3.09e-08

Protein translocase subunit SecG [Intracellular trafficking, secretion, and vesicular transport];


Pssm-ID: 440925  Cd Length: 91  Bit Score: 46.72  E-value: 3.09e-08
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1056041035   1 MYRFLLVIFLVISIVLIILIMLQQIKGADVKTS--SSVGSTIFSFKTYNKFVTSITFILATLVFVLSLILGNISNKYSKK 78
Cdd:COG1314     1 MYTVLLVLHVIVAILLIGLVLLQSGKGAGLGAAfgGGASGTLFGARGAANFLTRATAILAVLFFVLSLVLAYLASRGSSA 80


                  ....*
gi 1056041035  79 INGTD 83
Cdd:COG1314    81 SSVLD 85
 
Name Accession Description Interval E-value
SecG COG1314
Protein translocase subunit SecG [Intracellular trafficking, secretion, and vesicular ...
 1-83 3.09e-08

Protein translocase subunit SecG [Intracellular trafficking, secretion, and vesicular transport];


Pssm-ID: 440925  Cd Length: 91  Bit Score: 46.72  E-value: 3.09e-08
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1056041035   1 MYRFLLVIFLVISIVLIILIMLQQIKGADVKTS--SSVGSTIFSFKTYNKFVTSITFILATLVFVLSLILGNISNKYSKK 78
Cdd:COG1314     1 MYTVLLVLHVIVAILLIGLVLLQSGKGAGLGAAfgGGASGTLFGARGAANFLTRATAILAVLFFVLSLVLAYLASRGSSA 80


                  ....*
gi 1056041035  79 INGTD 83
Cdd:COG1314    81 SSVLD 85
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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