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Conserved domains on  [gi|1078005849|ref|WP_070094712|]
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MULTISPECIES: DUF2789 domain-containing protein [Pseudomonas]

Protein Classification

DUF2789 domain-containing protein( domain architecture ID 10567135)

uncharacterized DUF2789 domain-containing protein, similar to protein Cv0237 of Chromobacterium Violaceum

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
DUF2789 pfam10982
Protein of unknown function (DUF2789); This bacterial family of proteins has no known function.
 1-75 6.48e-34

Protein of unknown function (DUF2789); This bacterial family of proteins has no known function.


:

Pssm-ID: 431577  Cd Length: 74  Bit Score: 110.72  E-value: 6.48e-34
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1078005849  1 MEAPNHPFAELFKQLGLADDAESIDKFITTHsPLKNEIKLVDAPFWSEAQRAFLKESVIEDADWAVPFDQLNEAL 75
Cdd:pfam10982  1 MDTPTHDLSNLFAQLGLPSSEAAIDRFIAKH-PLPADVLLADAPFWNPAQAAFLREALEEDADWAEVVDQLNVLL 74
 
Name Accession Description Interval E-value
DUF2789 pfam10982
Protein of unknown function (DUF2789); This bacterial family of proteins has no known function.
 1-75 6.48e-34

Protein of unknown function (DUF2789); This bacterial family of proteins has no known function.


Pssm-ID: 431577  Cd Length: 74  Bit Score: 110.72  E-value: 6.48e-34
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1078005849  1 MEAPNHPFAELFKQLGLADDAESIDKFITTHsPLKNEIKLVDAPFWSEAQRAFLKESVIEDADWAVPFDQLNEAL 75
Cdd:pfam10982  1 MDTPTHDLSNLFAQLGLPSSEAAIDRFIAKH-PLPADVLLADAPFWNPAQAAFLREALEEDADWAEVVDQLNVLL 74
 
Name Accession Description Interval E-value
DUF2789 pfam10982
Protein of unknown function (DUF2789); This bacterial family of proteins has no known function.
 1-75 6.48e-34

Protein of unknown function (DUF2789); This bacterial family of proteins has no known function.


Pssm-ID: 431577  Cd Length: 74  Bit Score: 110.72  E-value: 6.48e-34
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1078005849  1 MEAPNHPFAELFKQLGLADDAESIDKFITTHsPLKNEIKLVDAPFWSEAQRAFLKESVIEDADWAVPFDQLNEAL 75
Cdd:pfam10982  1 MDTPTHDLSNLFAQLGLPSSEAAIDRFIAKH-PLPADVLLADAPFWNPAQAAFLREALEEDADWAEVVDQLNVLL 74
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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