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Conserved domains on  [gi|1092700774|ref|WP_070632211|]
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MULTISPECIES: N-acetylmannosamine-6-phosphate 2-epimerase [Staphylococcus]

Protein Classification

N-acetylmannosamine-6-phosphate 2-epimerase( domain architecture ID 10011628)

N-acetylmannosamine-6-phosphate 2-epimerase converts N-acetylmannosamine-6-phosphate (ManNAc-6-P) to N-acetylglucosamine-6-phosphate (GlcNAc-6-P)

Graphical summary

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List of domain hits

Name Accession Description Interval E-value
PRK01130 PRK01130
putative N-acetylmannosamine-6-phosphate 2-epimerase;
1-222 2.08e-129

putative N-acetylmannosamine-6-phosphate 2-epimerase;


:

Pssm-ID: 234907  Cd Length: 221  Bit Score: 363.70  E-value: 2.08e-129
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1092700774   1 MLPNGLIVSCQALPDEPLHSSFIMSKMALAAFQGGAVGIRANTKEDILAIREEVSLPVIGIVKRDYEGSNVFITATSKEV 80
Cdd:PRK01130    2 QLKGGLIVSCQALPGEPLHSPEIMAAMALAAVQGGAVGIRANGVEDIKAIRAVVDVPIIGIIKRDYPDSEVYITPTLKEV 81
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1092700774  81 DELIESGCEVIALDATTQTRPK-ESLEELVHYIREKaPHVAIMADISTVEEAINADHLNFDYIGTTLRGYTSYTKghILF 159
Cdd:PRK01130   82 DALAAAGADIIALDATLRPRPDgETLAELVKRIKEY-PGQLLMADCSTLEEGLAAQKLGFDFIGTTLSGYTEETK--KPE 158
                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1092700774 160 ENDFEFLKEVLEKVNAKVIAEGNVITPEMYKKVSDLGVHCTVVGGAITRPKQITERFIEAVQQ 222
Cdd:PRK01130  159 EPDFALLKELLKAVGCPVIAEGRINTPEQAKKALELGAHAVVVGGAITRPEEITKWFVDALKK 221
 
Name Accession Description Interval E-value
PRK01130 PRK01130
putative N-acetylmannosamine-6-phosphate 2-epimerase;
1-222 2.08e-129

putative N-acetylmannosamine-6-phosphate 2-epimerase;


Pssm-ID: 234907  Cd Length: 221  Bit Score: 363.70  E-value: 2.08e-129
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1092700774   1 MLPNGLIVSCQALPDEPLHSSFIMSKMALAAFQGGAVGIRANTKEDILAIREEVSLPVIGIVKRDYEGSNVFITATSKEV 80
Cdd:PRK01130    2 QLKGGLIVSCQALPGEPLHSPEIMAAMALAAVQGGAVGIRANGVEDIKAIRAVVDVPIIGIIKRDYPDSEVYITPTLKEV 81
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1092700774  81 DELIESGCEVIALDATTQTRPK-ESLEELVHYIREKaPHVAIMADISTVEEAINADHLNFDYIGTTLRGYTSYTKghILF 159
Cdd:PRK01130   82 DALAAAGADIIALDATLRPRPDgETLAELVKRIKEY-PGQLLMADCSTLEEGLAAQKLGFDFIGTTLSGYTEETK--KPE 158
                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1092700774 160 ENDFEFLKEVLEKVNAKVIAEGNVITPEMYKKVSDLGVHCTVVGGAITRPKQITERFIEAVQQ 222
Cdd:PRK01130  159 EPDFALLKELLKAVGCPVIAEGRINTPEQAKKALELGAHAVVVGGAITRPEEITKWFVDALKK 221
NanE COG3010
Putative N-acetylmannosamine-6-phosphate epimerase [Carbohydrate transport and metabolism];
2-223 4.14e-125

Putative N-acetylmannosamine-6-phosphate epimerase [Carbohydrate transport and metabolism];


Pssm-ID: 442247  Cd Length: 226  Bit Score: 352.87  E-value: 4.14e-125
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1092700774   2 LPNGLIVSCQALPDEPLHSSFIMSKMALAAFQGGAVGIRANTKEDILAIREEVSLPVIGIVKRDYEGSNVFITATSKEVD 81
Cdd:COG3010     7 LKGGLIVSCQALPGEPLHSPEIMAAMALAAVQGGAVGIRANGVEDIRAIKKAVDLPIIGIIKRDYPDSDVYITPTLEEVD 86
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1092700774  82 ELIESGCEVIALDATTQTRPK-ESLEELVHYIREKaPHVAIMADISTVEEAINADHLNFDYIGTTLRGYTSYTKGHILfe 160
Cdd:COG3010    87 ALAEAGADIIALDATRRPRPDgETLAELIARIHEE-PGALVMADISTLEEALAAAELGADIVGTTLSGYTGETKGTDG-- 163
                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1092700774 161 NDFEFLKEVLEKVNAKVIAEGNVITPEMYKKVSDLGVHCTVVGGAITRPKQITERFIEAVQQK 223
Cdd:COG3010   164 PDLELLKELVAALGVPVIAEGRIHTPEQAAAALELGAHAVVVGTAITRPELITKRFVDALKKA 226
NanE cd04729
N-acetylmannosamine-6-phosphate epimerase (NanE) converts N-acetylmannosamine-6-phosphate to ...
1-216 9.69e-109

N-acetylmannosamine-6-phosphate epimerase (NanE) converts N-acetylmannosamine-6-phosphate to N-acetylglucosamine-6-phosphate. This reaction is part of the pathway that allows the usage of sialic acid as a carbohydrate source. Sialic acids are a family of related sugars that are found as a component of glycoproteins, gangliosides, and other sialoglycoconjugates.


Pssm-ID: 240080 [Multi-domain]  Cd Length: 219  Bit Score: 311.43  E-value: 9.69e-109
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1092700774   1 MLPNGLIVSCQALPDEPLHSSFIMSKMALAAFQGGAVGIRANTKEDILAIREEVSLPVIGIVKRDYEGSNVFITATSKEV 80
Cdd:cd04729     6 QLKGGLIVSCQALPGEPLHSPEIMAAMALAAVQGGAVGIRANGVEDIRAIRARVDLPIIGLIKRDYPDSEVYITPTIEEV 85
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1092700774  81 DELIESGCEVIALDATTQTRPK-ESLEELVHYIREKApHVAIMADISTVEEAINADHLNFDYIGTTLRGYTSYTKGhiLF 159
Cdd:cd04729    86 DALAAAGADIIALDATDRPRPDgETLAELIKRIHEEY-NCLLMADISTLEEALNAAKLGFDIIGTTLSGYTEETAK--TE 162
                         170       180       190       200       210
                  ....*....|....*....|....*....|....*....|....*....|....*..
gi 1092700774 160 ENDFEFLKEVLEKVNAKVIAEGNVITPEMYKKVSDLGVHCTVVGGAITRPKQITERF 216
Cdd:cd04729   163 DPDFELLKELRKALGIPVIAEGRINSPEQAAKALELGADAVVVGSAITRPEHITGWF 219
NanE pfam04131
Putative N-acetylmannosamine-6-phosphate epimerase; This family represents a putative ...
24-222 6.85e-72

Putative N-acetylmannosamine-6-phosphate epimerase; This family represents a putative ManNAc-6-P-to-GlcNAc-6P epimerase in the N-acetylmannosamine (ManNAc) utilization pathway found mainly in pathogenic bacteria.


Pssm-ID: 427732  Cd Length: 192  Bit Score: 216.92  E-value: 6.85e-72
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1092700774  24 MSKMALAAFQGGAVGIRANTKEDILAIREEVSLPVIGIVKRDYEGSNVFITATSKEVDELIESGCEVIALDATTQTRPkE 103
Cdd:pfam04131   1 VSAMALAAEQAGAVGIRIEGVNNLKATRAVVDVPIIGIVKRDLPDSPVRITPFMKDIDELANAGADIIALDGTSRPRP-V 79
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1092700774 104 SLEELVHYIREKapHVAIMADISTVEEAINADHLNFDYIGTTLRGytsYTKGHILFENDFEFLKEVLEKvNAKVIAEGNV 183
Cdd:pfam04131  80 TIEDFIKRIKEK--GCLAMADCSTFEEGLNADKLGVDIIGTTLSG---YTGGENPAEPDFQLVKTLSEA-GCFVIAEGRY 153
                         170       180       190
                  ....*....|....*....|....*....|....*....
gi 1092700774 184 ITPEMYKKVSDLGVHCTVVGGAITRPKQITERFIEAVQQ 222
Cdd:pfam04131 154 NTPELAKKAIEIGADAVTVGSAITRLEHITQWFNNAIKS 192
 
Name Accession Description Interval E-value
PRK01130 PRK01130
putative N-acetylmannosamine-6-phosphate 2-epimerase;
1-222 2.08e-129

putative N-acetylmannosamine-6-phosphate 2-epimerase;


Pssm-ID: 234907  Cd Length: 221  Bit Score: 363.70  E-value: 2.08e-129
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1092700774   1 MLPNGLIVSCQALPDEPLHSSFIMSKMALAAFQGGAVGIRANTKEDILAIREEVSLPVIGIVKRDYEGSNVFITATSKEV 80
Cdd:PRK01130    2 QLKGGLIVSCQALPGEPLHSPEIMAAMALAAVQGGAVGIRANGVEDIKAIRAVVDVPIIGIIKRDYPDSEVYITPTLKEV 81
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1092700774  81 DELIESGCEVIALDATTQTRPK-ESLEELVHYIREKaPHVAIMADISTVEEAINADHLNFDYIGTTLRGYTSYTKghILF 159
Cdd:PRK01130   82 DALAAAGADIIALDATLRPRPDgETLAELVKRIKEY-PGQLLMADCSTLEEGLAAQKLGFDFIGTTLSGYTEETK--KPE 158
                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1092700774 160 ENDFEFLKEVLEKVNAKVIAEGNVITPEMYKKVSDLGVHCTVVGGAITRPKQITERFIEAVQQ 222
Cdd:PRK01130  159 EPDFALLKELLKAVGCPVIAEGRINTPEQAKKALELGAHAVVVGGAITRPEEITKWFVDALKK 221
NanE COG3010
Putative N-acetylmannosamine-6-phosphate epimerase [Carbohydrate transport and metabolism];
2-223 4.14e-125

Putative N-acetylmannosamine-6-phosphate epimerase [Carbohydrate transport and metabolism];


Pssm-ID: 442247  Cd Length: 226  Bit Score: 352.87  E-value: 4.14e-125
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1092700774   2 LPNGLIVSCQALPDEPLHSSFIMSKMALAAFQGGAVGIRANTKEDILAIREEVSLPVIGIVKRDYEGSNVFITATSKEVD 81
Cdd:COG3010     7 LKGGLIVSCQALPGEPLHSPEIMAAMALAAVQGGAVGIRANGVEDIRAIKKAVDLPIIGIIKRDYPDSDVYITPTLEEVD 86
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1092700774  82 ELIESGCEVIALDATTQTRPK-ESLEELVHYIREKaPHVAIMADISTVEEAINADHLNFDYIGTTLRGYTSYTKGHILfe 160
Cdd:COG3010    87 ALAEAGADIIALDATRRPRPDgETLAELIARIHEE-PGALVMADISTLEEALAAAELGADIVGTTLSGYTGETKGTDG-- 163
                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1092700774 161 NDFEFLKEVLEKVNAKVIAEGNVITPEMYKKVSDLGVHCTVVGGAITRPKQITERFIEAVQQK 223
Cdd:COG3010   164 PDLELLKELVAALGVPVIAEGRIHTPEQAAAALELGAHAVVVGTAITRPELITKRFVDALKKA 226
NanE cd04729
N-acetylmannosamine-6-phosphate epimerase (NanE) converts N-acetylmannosamine-6-phosphate to ...
1-216 9.69e-109

N-acetylmannosamine-6-phosphate epimerase (NanE) converts N-acetylmannosamine-6-phosphate to N-acetylglucosamine-6-phosphate. This reaction is part of the pathway that allows the usage of sialic acid as a carbohydrate source. Sialic acids are a family of related sugars that are found as a component of glycoproteins, gangliosides, and other sialoglycoconjugates.


Pssm-ID: 240080 [Multi-domain]  Cd Length: 219  Bit Score: 311.43  E-value: 9.69e-109
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1092700774   1 MLPNGLIVSCQALPDEPLHSSFIMSKMALAAFQGGAVGIRANTKEDILAIREEVSLPVIGIVKRDYEGSNVFITATSKEV 80
Cdd:cd04729     6 QLKGGLIVSCQALPGEPLHSPEIMAAMALAAVQGGAVGIRANGVEDIRAIRARVDLPIIGLIKRDYPDSEVYITPTIEEV 85
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1092700774  81 DELIESGCEVIALDATTQTRPK-ESLEELVHYIREKApHVAIMADISTVEEAINADHLNFDYIGTTLRGYTSYTKGhiLF 159
Cdd:cd04729    86 DALAAAGADIIALDATDRPRPDgETLAELIKRIHEEY-NCLLMADISTLEEALNAAKLGFDIIGTTLSGYTEETAK--TE 162
                         170       180       190       200       210
                  ....*....|....*....|....*....|....*....|....*....|....*..
gi 1092700774 160 ENDFEFLKEVLEKVNAKVIAEGNVITPEMYKKVSDLGVHCTVVGGAITRPKQITERF 216
Cdd:cd04729   163 DPDFELLKELRKALGIPVIAEGRINSPEQAAKALELGADAVVVGSAITRPEHITGWF 219
NanE pfam04131
Putative N-acetylmannosamine-6-phosphate epimerase; This family represents a putative ...
24-222 6.85e-72

Putative N-acetylmannosamine-6-phosphate epimerase; This family represents a putative ManNAc-6-P-to-GlcNAc-6P epimerase in the N-acetylmannosamine (ManNAc) utilization pathway found mainly in pathogenic bacteria.


Pssm-ID: 427732  Cd Length: 192  Bit Score: 216.92  E-value: 6.85e-72
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1092700774  24 MSKMALAAFQGGAVGIRANTKEDILAIREEVSLPVIGIVKRDYEGSNVFITATSKEVDELIESGCEVIALDATTQTRPkE 103
Cdd:pfam04131   1 VSAMALAAEQAGAVGIRIEGVNNLKATRAVVDVPIIGIVKRDLPDSPVRITPFMKDIDELANAGADIIALDGTSRPRP-V 79
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1092700774 104 SLEELVHYIREKapHVAIMADISTVEEAINADHLNFDYIGTTLRGytsYTKGHILFENDFEFLKEVLEKvNAKVIAEGNV 183
Cdd:pfam04131  80 TIEDFIKRIKEK--GCLAMADCSTFEEGLNADKLGVDIIGTTLSG---YTGGENPAEPDFQLVKTLSEA-GCFVIAEGRY 153
                         170       180       190
                  ....*....|....*....|....*....|....*....
gi 1092700774 184 ITPEMYKKVSDLGVHCTVVGGAITRPKQITERFIEAVQQ 222
Cdd:pfam04131 154 NTPELAKKAIEIGADAVTVGSAITRLEHITQWFNNAIKS 192
TIM_phosphate_binding cd04722
TIM barrel proteins share a structurally conserved phosphate binding motif and in general ...
6-204 1.00e-06

TIM barrel proteins share a structurally conserved phosphate binding motif and in general share an eight beta/alpha closed barrel structure. Specific for this family is the conserved phosphate binding site at the edges of strands 7 and 8. The phosphate comes either from the substrate, as in the case of inosine monophosphate dehydrogenase (IMPDH), or from ribulose-5-phosphate 3-epimerase (RPE) or from cofactors, like FMN.


Pssm-ID: 240073 [Multi-domain]  Cd Length: 200  Bit Score: 47.58  E-value: 1.00e-06
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1092700774   6 LIVSCQALPDEPLHSsfimsKMALAAFQGGAVGIRANTKEDILAIREEVSLPVIGIVKRDYEGS---NVFITATSKEVDE 82
Cdd:cd04722     1 VILALLAGGPSGDPV-----ELAKAAAEAGADAIIVGTRSSDPEEAETDDKEVLKEVAAETDLPlgvQLAINDAAAAVDI 75
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1092700774  83 L----IESGCEVIALDATTQTRPKESLEeLVHYIREKAPHVAIMADIS--TVEEAINADHLNFDYIGTTLRGYTSYtkGH 156
Cdd:cd04722    76 AaaaaRAAGADGVEIHGAVGYLAREDLE-LIRELREAVPDVKVVVKLSptGELAAAAAEEAGVDEVGLGNGGGGGG--GR 152
                         170       180       190       200
                  ....*....|....*....|....*....|....*....|....*...
gi 1092700774 157 ILFENDFEFLKEVLEKVNAKVIAEGNVITPEMYKKVSDLGVHCTVVGG 204
Cdd:cd04722   153 DAVPIADLLLILAKRGSKVPVIAGGGINDPEDAAEALALGADGVIVGS 200
ThiE COG0352
Thiamine monophosphate synthase [Coenzyme transport and metabolism]; Thiamine monophosphate ...
127-222 2.79e-05

Thiamine monophosphate synthase [Coenzyme transport and metabolism]; Thiamine monophosphate synthase is part of the Pathway/BioSystem: Thiamine biosynthesis


Pssm-ID: 440121 [Multi-domain]  Cd Length: 206  Bit Score: 43.25  E-value: 2.79e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1092700774 127 TVEEAINADHLNFDYIGTtlrG--YTSYTKGHILFENDFEFLKEVLEKVNAKVIAEGNvITPEMYKKVSDLGVHCTVVGG 204
Cdd:COG0352   109 SLEEALRAEEAGADYVGF---GpvFPTPTKPGAPPPLGLEGLAWWAELVEIPVVAIGG-ITPENAAEVLAAGADGVAVIS 184
                          90       100
                  ....*....|....*....|.
gi 1092700774 205 AITR---PKQITERFIEAVQQ 222
Cdd:COG0352   185 AIWGapdPAAAARELRAALEA 205
TMP_TenI cd00564
Thiamine monophosphate synthase (TMP synthase)/TenI. TMP synthase catalyzes an important step ...
125-218 1.18e-04

Thiamine monophosphate synthase (TMP synthase)/TenI. TMP synthase catalyzes an important step in the thiamine biosynthesis pathway, the substitution of the pyrophosphate of 2-methyl-4-amino-5- hydroxymethylpyrimidine pyrophosphate by 4-methyl-5- (beta-hydroxyethyl) thiazole phosphate to yield thiamine phosphate. TenI is a enzymatically inactive regulatory protein involved in the regulation of several extracellular enzymes. This superfamily also contains other enzymatically inactive proteins with unknown functions.


Pssm-ID: 238317 [Multi-domain]  Cd Length: 196  Bit Score: 41.35  E-value: 1.18e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1092700774 125 ISTVEEAINADHLNFDYIGTtlrG--YTSYTK---GHILfenDFEFLKEVLEKVNAKVIAEGNvITPEMYKKVSDLGVHC 199
Cdd:cd00564   102 THSLEEALRAEELGADYVGF---GpvFPTPTKpgaGPPL---GLELLREIAELVEIPVVAIGG-ITPENAAEVLAAGADG 174
                          90       100
                  ....*....|....*....|..
gi 1092700774 200 TVVGGAITR---PKQITERFIE 218
Cdd:cd00564   175 VAVISAITGaddPAAAARELLA 196
KGPDC_HPS cd04726
3-Keto-L-gulonate 6-phosphate decarboxylase (KGPDC) and D-arabino-3-hexulose-6-phosphate ...
101-216 1.78e-03

3-Keto-L-gulonate 6-phosphate decarboxylase (KGPDC) and D-arabino-3-hexulose-6-phosphate synthase (HPS). KGPDC catalyzes the formation of L-xylulose 5-phosphate and carbon dioxide from 3-keto-L-gulonate 6-phosphate as part of the anaerobic pathway for L-ascorbate utilization in some eubacteria. HPS catalyzes the formation of D-arabino-3-hexulose-6-phosphate from D-ribulose 5-phosphate and formaldehyde in microorganisms that can use formaldehyde as a carbon source. Both catalyze reactions that involve the Mg2+-assisted formation and stabilization of 1,2-enediolate reaction intermediates.


Pssm-ID: 240077 [Multi-domain]  Cd Length: 202  Bit Score: 37.95  E-value: 1.78e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1092700774 101 PKESLEELVHYIREKAPHVAI-MADISTVEEAINADHLNFDYIGTTlRGYTSYTKGHILFENDfefLKEVLEKVNAKV-I 178
Cdd:cd04726    88 PLSTIKKAVKAAKKYGKEVQVdLIGVEDPEKRAKLLKLGVDIVILH-RGIDAQAAGGWWPEDD---LKKVKKLLGVKVaV 163
                          90       100       110       120
                  ....*....|....*....|....*....|....*....|.
gi 1092700774 179 AEGnvITPEMYKKVSDLGVHCTVVGGAITR---PKQITERF 216
Cdd:cd04726   164 AGG--ITPDTLPEFKKAGADIVIVGRAITGaadPAEAAREF 202
His_biosynth pfam00977
Histidine biosynthesis protein; Proteins involved in steps 4 and 6 of the histidine ...
30-206 3.60e-03

Histidine biosynthesis protein; Proteins involved in steps 4 and 6 of the histidine biosynthesis pathway are contained in this family. Histidine is formed by several complex and distinct biochemical reactions catalyzed by eight enzymes. The enzymes in this Pfam entry are called His6 and His7 in eukaryotes and HisA and HisF in prokaryotes. The structure of HisA is known to be a TIM barrel fold. In some archaeal HisA proteins the TIM barrel is composed of two tandem repeats of a half barrel. This family belong to the common phosphate binding site TIM barrel family.


Pssm-ID: 425971  Cd Length: 228  Bit Score: 37.46  E-value: 3.60e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1092700774  30 AAFQGgavgiRANTKEDILAIREEVSLPVI---GIvkRDYEgsnvfitatskEVDELIESGCEVIALDATTQTRPkESLE 106
Cdd:pfam00977  53 AAKEG-----RPVNLDVVEEIAEEVFIPVQvggGI--RSLE-----------DVERLLSAGADRVIIGTAAVKNP-ELIK 113
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1092700774 107 ELVHYIREKAPHVAI--------------MADISTVEEAINADHLNFDYI--------GTtLRGYtsytkghilfenDFE 164
Cdd:pfam00977 114 EAAEKFGSQCIVVAIdarrgkvaingwreDTGIDAVEWAKELEELGAGEIlltdidrdGT-LSGP------------DLE 180
                         170       180       190       200
                  ....*....|....*....|....*....|....*....|..
gi 1092700774 165 FLKEVLEKVNAKVIAEGNVITPEMYKKVSDLGVHCTVVGGAI 206
Cdd:pfam00977 181 LTRELAEAVNIPVIASGGVGSLEDLKELFTEGVDGVIAGSAL 222
PRK07028 PRK07028
bifunctional hexulose-6-phosphate synthase/ribonuclease regulator; Validated
119-220 5.05e-03

bifunctional hexulose-6-phosphate synthase/ribonuclease regulator; Validated


Pssm-ID: 235912 [Multi-domain]  Cd Length: 430  Bit Score: 37.31  E-value: 5.05e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1092700774 119 VAIMAD-IST---VEEAINADHLNFDYIGTTLrGYTSYTKGhilfENDFEFLKEVLEKVNAKVIAEGNvITPEMYKKVSD 194
Cdd:PRK07028  108 VRLMADlINVpdpVKRAVELEELGVDYINVHV-GIDQQMLG----KDPLELLKEVSEEVSIPIAVAGG-LDAETAAKAVA 181
                          90       100
                  ....*....|....*....|....*....
gi 1092700774 195 LGVHCTVVGGAITRPKQITE---RFIEAV 220
Cdd:PRK07028  182 AGADIVIVGGNIIKSADVTEaarKIREAI 210
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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