|
Name |
Accession |
Description |
Interval |
E-value |
| PstA |
COG4985 |
ABC-type phosphate transport system, auxiliary component PstA [Inorganic ion transport and ... |
6-551 |
0e+00 |
|
ABC-type phosphate transport system, auxiliary component PstA [Inorganic ion transport and metabolism];
Pssm-ID: 444009 [Multi-domain] Cd Length: 545 Bit Score: 654.30 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1100983844 6 LNGWFKSGAPGVWISGGAVSIAVIMTIGLLAVIAVRGLGHFWPADLIQANYNVPGQENHIVIGEVVQKEEVPRERLKSAG 85
Cdd:COG4985 1 MKKWFKSGSPWIWLTAGAVSISLIAVLGLLLLIAVRGLGHFWPAPVYEFTYTQPDGEPVRLIGEIYDREEVPRARLRDAG 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1100983844 86 LPVPDQGPEFMTRELIKVGNRDLNGNDFTWIVGEWLKDQTTPANLMTIERREWGNFYGTLVNVKQDGKVIAEGEAAWPEL 165
Cdd:COG4985 81 VPLPGEDAEFVTRYLIKTGNRDLYGLDFRWVLEPDIVERSYPKDLAVLERREWGNFYGYLVAVKEDGQVVAEGDAAWEEL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1100983844 166 QARVDRVNKLAAQLKTLEKSDIGAINAGLERIRLHGRKLELEGKLDAAAQADMDADRAELNARYQDIEARLADLHAQFNR 245
Cdd:COG4985 161 QQRLERALELRDQIDDIEKGDIGAINYQLERLRLKERRLELDGQLDDEAQADIEAERAELEAEYAVLEQQLDALRQQINR 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1100983844 246 DALTARDGNGKEVEIGIGKVVHA-YQPNAMGTITKIGFYFSKVWEFLSDDPREANTEGGIFPAIFGTVMMTLIMAMIVTP 324
Cdd:COG4985 241 DSLVVRDMDGEEVEIPLVVVVVAvPNNNMMLAKKKKGFFLFGKFFFDSEEEAEEEGGGGIFFIIFVTVVMVLMVVVVVVV 320
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1100983844 325 FGVLAAVYLREYAKQNTLTRVIRIAVNNLAGVPAIVYGVFGLGFFVYVLGGSVDRLFFAEALPAPTFGTPGLLWASLTLA 404
Cdd:COG4985 321 VVVAAALYYYYYAGGGLTIRIIRVVNNNLGVVVVVVVGGFGGFFFFLGGGGDDDFFFFAAAPPPTPGGGGLLLLLLLLLL 400
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1100983844 405 LLAVPVVIVATEEGLARIPRTVREGSLALGATKAETLWKIVLPMASPAMMTGMILAVARAAGEVAPLMLVGVVKLAPSLP 484
Cdd:COG4985 401 LLVVVVVVVEEEELRRRSSRRSGSLLLAAAATTATTLWVVVLPAAAMAMMLLLAAAAAAAAAAALLLLVVVVVALPPPLP 480
|
490 500 510 520 530 540
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1100983844 485 LDGNYPYLHLDQKIMHLGFHIYDVGFQSPNVEAARPLVYATALLLVLVIatLNLSAVWIRNHLREKY 551
Cdd:COG4985 481 LDPPFFLLLLKHKFMHFFFYIVDVFSQPPVAAAALLLVAALLLLLVVVI--LLLLAIAIIRRRRRRR 545
|
|
| 3a0107s02c |
TIGR00974 |
phosphate ABC transporter, permease protein PstA; This model describes PtsA, one of a pair of ... |
288-549 |
8.55e-81 |
|
phosphate ABC transporter, permease protein PstA; This model describes PtsA, one of a pair of permease proteins in the ABC (high affinity) phosphate transporter. In a number of species, this permease is fused with the PtsC protein (TIGR02138). In the model bacterium Escherichia coli, this transport system is induced when the concentration of extrallular inorganic phosphate is low. A constitutive, lower affinity transporter operates otherwise. [Transport and binding proteins, Anions]
Pssm-ID: 273373 Cd Length: 271 Bit Score: 254.08 E-value: 8.55e-81
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1100983844 288 WEFLSDDPREANTEGGIFPAIFGTVMMTLIMAMIVTPFGVLAAVYLREYAKQNTLTRVIRIAVNNLAGVPAIVYGVFGLG 367
Cdd:TIGR00974 36 LEFFTKSPTPTGAEGGIGPAIVGTLLLTLLAIVIAVPLGIGAAIYLAEYANGSRFTKIIRFAVDILAGVPSIVVGLFGYG 115
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1100983844 368 FFVYVLggsvdrLFFAEALPAptfgtpgllwASLTLALLAVPVVIVATEEGLARIPRTVREGSLALGATKAETLWKIVLP 447
Cdd:TIGR00974 116 FFVLTY------LGGGFSLLA----------GALALALLILPVIIRTTEEALKAVPKDLREASLALGATKWQTIFKVVLP 179
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1100983844 448 MASPAMMTGMILAVARAAGEVAPLmLVGVVKLAPSLPldgnypylHLDQKIMHLGFHIYDVGFQSPNVEaARPLVYATAL 527
Cdd:TIGR00974 180 AALPGILTGIILSIARAAGETAPL-LFTAGGSAFTPP--------NLFDPFATLPVLIYNLASEGPYVE-AQQLAWAAAL 249
|
250 260
....*....|....*....|..
gi 1100983844 528 LLVLVIATLNLSAVWIRNHLRE 549
Cdd:TIGR00974 250 VLIVLVLLLNLIARLLRRRFKK 271
|
|
| pstA |
PRK11268 |
phosphate ABC transporter permease PstA; |
299-472 |
1.09e-26 |
|
phosphate ABC transporter permease PstA;
Pssm-ID: 183065 [Multi-domain] Cd Length: 295 Bit Score: 110.16 E-value: 1.09e-26
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1100983844 299 NTE-GGIFPAIFGTVMMTLIMAMIVTPFGVLAAVYLREYAKQNTLTRVIRIAVNNLAGVPAIVygvfgLGFFVYVLGGSV 377
Cdd:PRK11268 73 NTAgGGLANAIAGSGLLILWATVVGTPLGIMAGIYLAEYGRKSWLAEVIRFINDILLSAPSIV-----VGLFVYTIVVAQ 147
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1100983844 378 DRLFFAealpaptfgtpgllWAS-LTLALLAVPVVIVATEEGLARIPRTVREGSLALGATKAETLWKIVLPMASPAMMTG 456
Cdd:PRK11268 148 MEHFSG--------------WAGvIALALLQIPIVIRTTENMLKLVPDSLREAAYALGTPKWKMISAITLKASVSGIMTG 213
|
170
....*....|....*.
gi 1100983844 457 MILAVARAAGEVAPLM 472
Cdd:PRK11268 214 VLLAIARIAGETAPLL 229
|
|
| TM_PBP2 |
cd06261 |
Transmembrane subunit (TM) found in Periplasmic Binding Protein (PBP)-dependent ATP-Binding ... |
308-475 |
5.76e-17 |
|
Transmembrane subunit (TM) found in Periplasmic Binding Protein (PBP)-dependent ATP-Binding Cassette (ABC) transporters which generally bind type 2 PBPs. These types of transporters consist of a PBP, two TMs, and two cytoplasmic ABC ATPase subunits, and are mainly involved in importing solutes from the environment. The solute is captured by the PBP which delivers it to a gated translocation pathway formed by the two TMs. The two ABCs bind and hydrolyze ATP and drive the transport reaction. For these transporters the ABCs and TMs are on independent polypeptide chains. These systems transport a diverse range of substrates. Most are specific for a single substrate or a group of related substrates; however some transporters are more promiscuous, transporting structurally diverse substrates such as the histidine/lysine and arginine transporter in Enterobacteriaceae. In the latter case, this is achieved through binding different PBPs with different specificities to the TMs. For other promiscuous transporters such as the multiple-sugar transporter Msm of Streptococcus mutans, the PBP has a wide substrate specificity. These transporters include the maltose-maltodextrin, phosphate and sulfate transporters, among others.
Pssm-ID: 119394 [Multi-domain] Cd Length: 190 Bit Score: 79.24 E-value: 5.76e-17
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1100983844 308 IFGTVMMTLIMAMIVTPFGVLAAVYLREYakQNTLTRVIRIAVNNLAGVPAIVYGVFGLGFFVYVLGGSVDRLFFaealp 387
Cdd:cd06261 1 LLNTLLLALIATLLALVLGLLLGIILARK--RGKLDRLLRRIIDLLLSLPSLVLGLLLVLLFGVLLGWGILPGLG----- 73
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1100983844 388 aptfgtpglLWASLTLALLAVPVVIVATEEGLARIPRTVREGSLALGATKAETLWKIVLPMASPAMMTGMILAVARAAGE 467
Cdd:cd06261 74 ---------LPALILALLLIAPFARLIRRAALESIPKDLVEAARALGASPWQIFRRIILPLALPPILTGLVLAFARALGE 144
|
....*...
gi 1100983844 468 VAPLMLVG 475
Cdd:cd06261 145 FALVSFLG 152
|
|
| BPD_transp_1 |
pfam00528 |
Binding-protein-dependent transport system inner membrane component; The alignments cover the ... |
323-547 |
4.10e-09 |
|
Binding-protein-dependent transport system inner membrane component; The alignments cover the most conserved region of the proteins, which is thought to be located in a cytoplasmic loop between two transmembrane domains. The members of this family have a variable number of transmembrane helices.
Pssm-ID: 334128 [Multi-domain] Cd Length: 183 Bit Score: 56.15 E-value: 4.10e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1100983844 323 TPFGVLAAVYLReyakqNTLTRVIRIAVNNLAGVPAIVygvfgLGFFVYVLGGSVDRLFfaealpaptfgtpGLLWASLT 402
Cdd:pfam00528 2 IPLGIIAALRRG-----RRLDRLLRPLIDLLQALPSFV-----LAILLVVIAILSILGH-------------GILPAIIL 58
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1100983844 403 LALLAVPVVIVATEEGLARIPRTVREGSLALGATKAETLWKIVLPMASPAMMTGMILAVARAAGEVAPLMLVGVVKLAPS 482
Cdd:pfam00528 59 ALLGWAGYARLIRRAALRSLPSDLVEAARALGASRWQIFRKIILPNALPPILTGLALAFGGALGGAVLLEFLGSWPGLGL 138
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1100983844 483 LPLDGNYpylhldqkimhlgfhIYDVgfqspnveaarPLVYATALLLVLVIATLNLSAVWIRNHL 547
Cdd:pfam00528 139 LLIEAIL---------------GYDY-----------PEIQGPVLAAALILLLLNLLVDILQRLL 177
|
|
| ABC_perm1 |
NF038017 |
ABC transporter permease; Proteins of this family are the permease subunit of an ABC ... |
315-475 |
5.45e-08 |
|
ABC transporter permease; Proteins of this family are the permease subunit of an ABC transporter complex, which may be involved in tungstate uptake.
Pssm-ID: 411610 [Multi-domain] Cd Length: 184 Bit Score: 52.93 E-value: 5.45e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1100983844 315 TLIMAMIVTPFGVLaaVYLREYAKQNTLTRVIriavNNLAGVPAIVYGVFglgffVYVLGGSVDRLFFAEALPAPTfgtp 394
Cdd:NF038017 9 TLIAALIGIPLGAL--LALRRFPGRRLVISLL----NTLMGLPPVVVGLI-----VYLLLSRSGPLGFLGLLYTPT---- 73
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1100983844 395 GLLWASltlALLAVPVVIVATEEGLARIPRTVREGSLALGATKAETLWkIVLPMASPAMMTGMILAVARAAGEVAPLMLV 474
Cdd:NF038017 74 AMIIAQ---AVLALPIVAGLTLAAVQGLDPELRLQILSLGATRWQALW-TLLKEARFALLAAVLAGFGRAISEVGAVMMV 149
|
.
gi 1100983844 475 G 475
Cdd:NF038017 150 G 150
|
|
| |
|
Name |
Accession |
Description |
Interval |
E-value |
| PstA |
COG4985 |
ABC-type phosphate transport system, auxiliary component PstA [Inorganic ion transport and ... |
6-551 |
0e+00 |
|
ABC-type phosphate transport system, auxiliary component PstA [Inorganic ion transport and metabolism];
Pssm-ID: 444009 [Multi-domain] Cd Length: 545 Bit Score: 654.30 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1100983844 6 LNGWFKSGAPGVWISGGAVSIAVIMTIGLLAVIAVRGLGHFWPADLIQANYNVPGQENHIVIGEVVQKEEVPRERLKSAG 85
Cdd:COG4985 1 MKKWFKSGSPWIWLTAGAVSISLIAVLGLLLLIAVRGLGHFWPAPVYEFTYTQPDGEPVRLIGEIYDREEVPRARLRDAG 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1100983844 86 LPVPDQGPEFMTRELIKVGNRDLNGNDFTWIVGEWLKDQTTPANLMTIERREWGNFYGTLVNVKQDGKVIAEGEAAWPEL 165
Cdd:COG4985 81 VPLPGEDAEFVTRYLIKTGNRDLYGLDFRWVLEPDIVERSYPKDLAVLERREWGNFYGYLVAVKEDGQVVAEGDAAWEEL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1100983844 166 QARVDRVNKLAAQLKTLEKSDIGAINAGLERIRLHGRKLELEGKLDAAAQADMDADRAELNARYQDIEARLADLHAQFNR 245
Cdd:COG4985 161 QQRLERALELRDQIDDIEKGDIGAINYQLERLRLKERRLELDGQLDDEAQADIEAERAELEAEYAVLEQQLDALRQQINR 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1100983844 246 DALTARDGNGKEVEIGIGKVVHA-YQPNAMGTITKIGFYFSKVWEFLSDDPREANTEGGIFPAIFGTVMMTLIMAMIVTP 324
Cdd:COG4985 241 DSLVVRDMDGEEVEIPLVVVVVAvPNNNMMLAKKKKGFFLFGKFFFDSEEEAEEEGGGGIFFIIFVTVVMVLMVVVVVVV 320
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1100983844 325 FGVLAAVYLREYAKQNTLTRVIRIAVNNLAGVPAIVYGVFGLGFFVYVLGGSVDRLFFAEALPAPTFGTPGLLWASLTLA 404
Cdd:COG4985 321 VVVAAALYYYYYAGGGLTIRIIRVVNNNLGVVVVVVVGGFGGFFFFLGGGGDDDFFFFAAAPPPTPGGGGLLLLLLLLLL 400
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1100983844 405 LLAVPVVIVATEEGLARIPRTVREGSLALGATKAETLWKIVLPMASPAMMTGMILAVARAAGEVAPLMLVGVVKLAPSLP 484
Cdd:COG4985 401 LLVVVVVVVEEEELRRRSSRRSGSLLLAAAATTATTLWVVVLPAAAMAMMLLLAAAAAAAAAAALLLLVVVVVALPPPLP 480
|
490 500 510 520 530 540
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1100983844 485 LDGNYPYLHLDQKIMHLGFHIYDVGFQSPNVEAARPLVYATALLLVLVIatLNLSAVWIRNHLREKY 551
Cdd:COG4985 481 LDPPFFLLLLKHKFMHFFFYIVDVFSQPPVAAAALLLVAALLLLLVVVI--LLLLAIAIIRRRRRRR 545
|
|
| PstA |
COG0581 |
ABC-type phosphate transport system, permease component [Inorganic ion transport and ... |
288-552 |
5.98e-108 |
|
ABC-type phosphate transport system, permease component [Inorganic ion transport and metabolism];
Pssm-ID: 440346 [Multi-domain] Cd Length: 259 Bit Score: 323.53 E-value: 5.98e-108
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1100983844 288 WEFLSDDPREANTEGGIFPAIFGTVMMTLIMAMIVTPFGVLAAVYLREYAKQNTLTRVIRIAVNNLAGVPAIVYGVFGLG 367
Cdd:COG0581 23 WEFLTSSPSPGPEGGGILPAIVGTLLLVLLATLIAVPLGVLAAIYLAEYARGGRLARLIRFAIDVLAGVPSIVYGLFGYA 102
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1100983844 368 FFVYVLGgsvdrlffaealpaptfGTPGLLWASLTLALLAVPVVIVATEEGLARIPRTVREGSLALGATKAETLWKIVLP 447
Cdd:COG0581 103 LFVLTLG-----------------LGFSLLAGALALALLMLPVVIRTTEEALRLVPNSLREASYALGATKWQTIRKVVLP 165
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1100983844 448 MASPAMMTGMILAVARAAGEVAPLMLVGVVklAPSLPLDgnypylhLDQKIMHLGFHIYDVGFQSPnvEAARPLVYATAL 527
Cdd:COG0581 166 AALPGILTGVILAIARAAGETAPLLFTAGV--SPFLPLS-------LFDPFATLPVHIYNLASSPY--PAAQELAWAAAL 234
|
250 260
....*....|....*....|....*
gi 1100983844 528 LLVLVIATLNLSAVWIRNHLREKYK 552
Cdd:COG0581 235 VLLLLVLLLNLLARLLRRRFRKKLK 259
|
|
| 3a0107s02c |
TIGR00974 |
phosphate ABC transporter, permease protein PstA; This model describes PtsA, one of a pair of ... |
288-549 |
8.55e-81 |
|
phosphate ABC transporter, permease protein PstA; This model describes PtsA, one of a pair of permease proteins in the ABC (high affinity) phosphate transporter. In a number of species, this permease is fused with the PtsC protein (TIGR02138). In the model bacterium Escherichia coli, this transport system is induced when the concentration of extrallular inorganic phosphate is low. A constitutive, lower affinity transporter operates otherwise. [Transport and binding proteins, Anions]
Pssm-ID: 273373 Cd Length: 271 Bit Score: 254.08 E-value: 8.55e-81
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1100983844 288 WEFLSDDPREANTEGGIFPAIFGTVMMTLIMAMIVTPFGVLAAVYLREYAKQNTLTRVIRIAVNNLAGVPAIVYGVFGLG 367
Cdd:TIGR00974 36 LEFFTKSPTPTGAEGGIGPAIVGTLLLTLLAIVIAVPLGIGAAIYLAEYANGSRFTKIIRFAVDILAGVPSIVVGLFGYG 115
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1100983844 368 FFVYVLggsvdrLFFAEALPAptfgtpgllwASLTLALLAVPVVIVATEEGLARIPRTVREGSLALGATKAETLWKIVLP 447
Cdd:TIGR00974 116 FFVLTY------LGGGFSLLA----------GALALALLILPVIIRTTEEALKAVPKDLREASLALGATKWQTIFKVVLP 179
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1100983844 448 MASPAMMTGMILAVARAAGEVAPLmLVGVVKLAPSLPldgnypylHLDQKIMHLGFHIYDVGFQSPNVEaARPLVYATAL 527
Cdd:TIGR00974 180 AALPGILTGIILSIARAAGETAPL-LFTAGGSAFTPP--------NLFDPFATLPVLIYNLASEGPYVE-AQQLAWAAAL 249
|
250 260
....*....|....*....|..
gi 1100983844 528 LLVLVIATLNLSAVWIRNHLRE 549
Cdd:TIGR00974 250 VLIVLVLLLNLIARLLRRRFKK 271
|
|
| PstC |
COG0573 |
ABC-type phosphate transport system, permease component [Inorganic ion transport and ... |
272-552 |
1.66e-50 |
|
ABC-type phosphate transport system, permease component [Inorganic ion transport and metabolism];
Pssm-ID: 440338 [Multi-domain] Cd Length: 303 Bit Score: 175.66 E-value: 1.66e-50
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1100983844 272 NAMGTITKIG---FYFSKVWeflsdDPREANTEGGIFPAIFGTVMMTLIMAMIVTPFGVLAAVYLREYAKQnTLTRVIRI 348
Cdd:COG0573 45 ESLPAFQEVGlleFLTGTEW-----NPVSSNGEFGILPLIVGTLLVSLIALLIAVPLGLGIAIFLSEYAPP-RLRRILKP 118
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1100983844 349 AVNNLAGVPAIVYGVFGLGFFVyvlggsvdrLFFAEALPAPTFGTpGLLWASLTLALLAVPVVIVATEEGLARIPRTVRE 428
Cdd:COG0573 119 AIELLAGIPSVVYGFWGLFVLV---------PLLRDLFPWPPSGF-SLLTAGIVLAIMILPTITSLSRDALRAVPRSLRE 188
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1100983844 429 GSLALGATKAETLWKIVLPMASPAMMTGMILAVARAAGE-VAPLMLVGVVKLAPSLPLDGNYPylhLDQKI-MHLGfhiy 506
Cdd:COG0573 189 AALALGATRWETIRKVVLPAARSGIIAAVILGLGRALGEtMAVLMVAGNAPQIPFSLFDPGRT---LTALIaLEFG---- 261
|
250 260 270 280
....*....|....*....|....*....|....*....|....*.
gi 1100983844 507 DVGFQSPNVEAArplvYATALLLVLVIATLNLSAVWIRNHLREKYK 552
Cdd:COG0573 262 EAPFGSLHYSAL----FALGLVLFVITLLVNLLARLIVRRYREKYG 303
|
|
| phosphate_pstC |
TIGR02138 |
phosphate ABC transporter, permease protein PstC; The typical operon for the high affinity ... |
280-543 |
1.04e-39 |
|
phosphate ABC transporter, permease protein PstC; The typical operon for the high affinity inorganic phosphate ABC transporter encodes an ATP-binding protein, a phosphate-binding protein, and two permease proteins. This family consists of one of the two permease proteins, PstC, which is homologous to PstA (TIGR00974). In the model bacterium Escherichia coli, this transport system is induced when the concentration of extrallular inorganic phosphate is low. A constitutive, lower affinity transporter operates otherwise. [Transport and binding proteins, Anions]
Pssm-ID: 273992 [Multi-domain] Cd Length: 295 Bit Score: 146.26 E-value: 1.04e-39
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1100983844 280 IGFYFSKVWEFLSDDPREAnteGGIFPAIFGTVMMTLIMAMIVTPFGVLAAVYLREYAKqNTLTRVIRIAVNNLAGVPAI 359
Cdd:TIGR02138 40 LNFLTGTVWDPGSGPVQEQ---YGALPLIVGTLITSLIALLIAVPVGIGIAIFLSEIAP-KRVRSVLKPVVELLAGIPSV 115
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1100983844 360 VYGVFGLGFFVYVLGGSVDRLFFAEALPAPTFGTPgLLWASLTLALLAVPVVIVATEEGLARIPRTVREGSLALGATKAE 439
Cdd:TIGR02138 116 VYGFWGLFVLVPFLKPHFQPFLGSNLGLIPLFGGP-ILTAGIVLAIMILPTIASISRDALRAVPRSYKEASYALGATKWE 194
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1100983844 440 TLWKIVLPMASPAMMTGMILAVARAAGE-VAPLMLVGVVklAPSLPLDGNYPYLHLDQKI-MHLGfhiyDVGFQSPNVEA 517
Cdd:TIGR02138 195 TIRRVILPAARSGIVGAVVLGLGRALGEtMAVTMVIGNV--FPISPLSLFDPGTTITSLIaNQFG----EASGGSVHTSA 268
|
250 260
....*....|....*....|....*.
gi 1100983844 518 ArplvYATALLLVLVIATLNLSAVWI 543
Cdd:TIGR02138 269 L----FALGLVLFVITLLVNILARYI 290
|
|
| pstA |
PRK11268 |
phosphate ABC transporter permease PstA; |
299-472 |
1.09e-26 |
|
phosphate ABC transporter permease PstA;
Pssm-ID: 183065 [Multi-domain] Cd Length: 295 Bit Score: 110.16 E-value: 1.09e-26
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1100983844 299 NTE-GGIFPAIFGTVMMTLIMAMIVTPFGVLAAVYLREYAKQNTLTRVIRIAVNNLAGVPAIVygvfgLGFFVYVLGGSV 377
Cdd:PRK11268 73 NTAgGGLANAIAGSGLLILWATVVGTPLGIMAGIYLAEYGRKSWLAEVIRFINDILLSAPSIV-----VGLFVYTIVVAQ 147
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1100983844 378 DRLFFAealpaptfgtpgllWAS-LTLALLAVPVVIVATEEGLARIPRTVREGSLALGATKAETLWKIVLPMASPAMMTG 456
Cdd:PRK11268 148 MEHFSG--------------WAGvIALALLQIPIVIRTTENMLKLVPDSLREAAYALGTPKWKMISAITLKASVSGIMTG 213
|
170
....*....|....*.
gi 1100983844 457 MILAVARAAGEVAPLM 472
Cdd:PRK11268 214 VLLAIARIAGETAPLL 229
|
|
| TM_PBP2 |
cd06261 |
Transmembrane subunit (TM) found in Periplasmic Binding Protein (PBP)-dependent ATP-Binding ... |
308-475 |
5.76e-17 |
|
Transmembrane subunit (TM) found in Periplasmic Binding Protein (PBP)-dependent ATP-Binding Cassette (ABC) transporters which generally bind type 2 PBPs. These types of transporters consist of a PBP, two TMs, and two cytoplasmic ABC ATPase subunits, and are mainly involved in importing solutes from the environment. The solute is captured by the PBP which delivers it to a gated translocation pathway formed by the two TMs. The two ABCs bind and hydrolyze ATP and drive the transport reaction. For these transporters the ABCs and TMs are on independent polypeptide chains. These systems transport a diverse range of substrates. Most are specific for a single substrate or a group of related substrates; however some transporters are more promiscuous, transporting structurally diverse substrates such as the histidine/lysine and arginine transporter in Enterobacteriaceae. In the latter case, this is achieved through binding different PBPs with different specificities to the TMs. For other promiscuous transporters such as the multiple-sugar transporter Msm of Streptococcus mutans, the PBP has a wide substrate specificity. These transporters include the maltose-maltodextrin, phosphate and sulfate transporters, among others.
Pssm-ID: 119394 [Multi-domain] Cd Length: 190 Bit Score: 79.24 E-value: 5.76e-17
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1100983844 308 IFGTVMMTLIMAMIVTPFGVLAAVYLREYakQNTLTRVIRIAVNNLAGVPAIVYGVFGLGFFVYVLGGSVDRLFFaealp 387
Cdd:cd06261 1 LLNTLLLALIATLLALVLGLLLGIILARK--RGKLDRLLRRIIDLLLSLPSLVLGLLLVLLFGVLLGWGILPGLG----- 73
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1100983844 388 aptfgtpglLWASLTLALLAVPVVIVATEEGLARIPRTVREGSLALGATKAETLWKIVLPMASPAMMTGMILAVARAAGE 467
Cdd:cd06261 74 ---------LPALILALLLIAPFARLIRRAALESIPKDLVEAARALGASPWQIFRRIILPLALPPILTGLVLAFARALGE 144
|
....*...
gi 1100983844 468 VAPLMLVG 475
Cdd:cd06261 145 FALVSFLG 152
|
|
| FbpB |
COG1178 |
ABC-type Fe3+ transport system, permease component [Inorganic ion transport and metabolism]; |
289-538 |
1.08e-16 |
|
ABC-type Fe3+ transport system, permease component [Inorganic ion transport and metabolism];
Pssm-ID: 440791 [Multi-domain] Cd Length: 538 Bit Score: 82.90 E-value: 1.08e-16
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1100983844 289 EFLSDDPREANTEGGIFPAIFGTVMMTLIMAMIVTPFGVLAAVYLREYakQNTLTRVIRIAVNNLAGVPAIVygvFGLGF 368
Cdd:COG1178 321 NLTLDNYRFVLLDPSLLRALLNSLLLALLAALLAVLLALLLAYLVRRR--RGRLARLLDRLAMLPYAVPGIV---LGLGL 395
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1100983844 369 FvyvlggsvdrLFFAEALPAPTFGTPGLLWasLTLALLAVPVVIVATEEGLARIPRTVREGSLALGATKAETLWKIVLPM 448
Cdd:COG1178 396 L----------LLFNRPLPLLLYGTLAILV--LAYVVRFLPFALRSLEAALAQIDPSLEEAARSLGASPLRTLRRVTLPL 463
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1100983844 449 ASPAMMTGMILAVARAAGEV-APLMLVGvvklaPSLPLdgnypylhldqkimhLGFHIYDVgFQSPNVEAArplvYATAL 527
Cdd:COG1178 464 LRPGLLAAALLVFVTSMKELsATLLLRP-----PGFET---------------LAVLIYQL-ASSGRYGEA----AALAL 518
|
250
....*....|.
gi 1100983844 528 LLVLVIATLNL 538
Cdd:COG1178 519 LLVLVSLLPVL 529
|
|
| pstC |
PRK11275 |
phosphate ABC transporter permease PstC; |
273-467 |
1.08e-15 |
|
phosphate ABC transporter permease PstC;
Pssm-ID: 183070 Cd Length: 319 Bit Score: 78.20 E-value: 1.08e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1100983844 273 AMGTITKIGFYF--SKVWeflsDDPreANTEGGIFPaIFGTVMMTLIMAMIVTPFGVLAAVYLREYAKqNTLTRVIRIAV 350
Cdd:PRK11275 45 SWPSIQKFGLSFlwTKEW----DAP--NDIYGALVP-IYGTLVTSFIALLIAVPVSFGIALFLTELAP-GWLKRPLGIAI 116
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1100983844 351 NNLAGVPAIVYGVFGL--------GFFVYVLGGSVDRLFFAEAL-PAPTFGTpGLLWASLTLALLAVPVVIVATEEGLAR 421
Cdd:PRK11275 117 ELLAAIPSIVYGMWGLfvfaplfaTYFQEPVGNVLSNIPIVGALfSGPAFGI-GILAAGVILAIMIIPYIAAVMRDVFEQ 195
|
170 180 190 200
....*....|....*....|....*....|....*....|....*.
gi 1100983844 422 IPRTVREGSLALGATKAETLWKIVLPMASPAMMTGMILAVARAAGE 467
Cdd:PRK11275 196 TPVMMKESAYGIGCTTWEVIWRIVLPFTKNGVIGGVMLGLGRALGE 241
|
|
| ModB |
COG4149 |
ABC-type molybdate transport system, permease component ModB [Inorganic ion transport and ... |
391-475 |
3.87e-11 |
|
ABC-type molybdate transport system, permease component ModB [Inorganic ion transport and metabolism]; ABC-type molybdate transport system, permease component ModB is part of the Pathway/BioSystem: Molybdopterin biosynthesis
Pssm-ID: 443320 [Multi-domain] Cd Length: 223 Bit Score: 62.76 E-value: 3.87e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1100983844 391 FGTPGLLWASltlALLAVPVVIVATEEGLARIPRTVREGSLALGATKAETLWKIVLPMASPAMMTGMILAVARAAGEV-A 469
Cdd:COG4149 88 FTWTGAVLAS---VVVSLPLMVQPLRAAFEAVDPRLEEAARTLGASPWRVFFRVTLPLAKPGILAGAVLAFARALGEFgA 164
|
....*.
gi 1100983844 470 PLMLVG 475
Cdd:COG4149 165 TLMFAG 170
|
|
| CysU |
COG0555 |
ABC-type sulfate transport system, permease component [Inorganic ion transport and metabolism]; ... |
284-467 |
7.88e-11 |
|
ABC-type sulfate transport system, permease component [Inorganic ion transport and metabolism];
Pssm-ID: 440321 [Multi-domain] Cd Length: 268 Bit Score: 62.85 E-value: 7.88e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1100983844 284 FSKVWEFLSDdPReanteggIFPAIFGTVMMTLIMAMIVTPFGVLAAVYLREYakQNTLTRVIRIAVNNLAGVPAIVYGV 363
Cdd:COG0555 40 WAEFWAVLTS-PR-------VLAALKLSLGTALIAALINLVFGLPLAWVLVRY--RFPGKRLVDALVDLPFALPTAVAGI 109
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1100983844 364 -----FG----LGFFVYVLGGSVdrlffaealpapTFGTPGLLWAsltLALLAVPVVIVATEEGLARIPRTVREGSLALG 434
Cdd:COG0555 110 allllFGpngwLGQLLAPLGIKV------------AFTPLGIVLA---QTFVSLPFVVRTVQPVLEELDPELEEAAATLG 174
|
170 180 190
....*....|....*....|....*....|...
gi 1100983844 435 ATKAETLWKIVLPMASPAMMTGMILAVARAAGE 467
Cdd:COG0555 175 ASRWQTFRRVILPLLLPALLTGFALAFARALGE 207
|
|
| PotC |
COG1177 |
ABC-type spermidine/putrescine transport system, permease component II [Amino acid transport ... |
306-475 |
3.05e-10 |
|
ABC-type spermidine/putrescine transport system, permease component II [Amino acid transport and metabolism];
Pssm-ID: 440790 [Multi-domain] Cd Length: 262 Bit Score: 60.90 E-value: 3.05e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1100983844 306 PAIFGTVMMTLIMAMIV----TPFGVLAAVYLREYAKQntLTRVIRIAVNNLAGVPAIVYGVfGLGFFVYVLGGSvdrlf 381
Cdd:COG1177 57 PRLLDALLNSLLIALLStllaTVLGTPAALALARYRFR--GRRLLLALLLLPLVVPGIVLGV-ALLLLFSALGLS----- 128
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1100983844 382 faealpaptfGTPGLLWASLTLalLAVPVVIVATEEGLARIPRTVREGSLALGATKAETLWKIVLPMASPAMMTGMILAV 461
Cdd:COG1177 129 ----------GGLWGLILAHVV--FTLPFVVLVVLARLQGFDPSLEEAARDLGASPWQTFRRVTLPLIAPGILAGALLAF 196
|
170
....*....|....*
gi 1100983844 462 ARAAGEVA-PLMLVG 475
Cdd:COG1177 197 TLSFDEFViTLFLAG 211
|
|
| BPD_transp_1 |
pfam00528 |
Binding-protein-dependent transport system inner membrane component; The alignments cover the ... |
323-547 |
4.10e-09 |
|
Binding-protein-dependent transport system inner membrane component; The alignments cover the most conserved region of the proteins, which is thought to be located in a cytoplasmic loop between two transmembrane domains. The members of this family have a variable number of transmembrane helices.
Pssm-ID: 334128 [Multi-domain] Cd Length: 183 Bit Score: 56.15 E-value: 4.10e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1100983844 323 TPFGVLAAVYLReyakqNTLTRVIRIAVNNLAGVPAIVygvfgLGFFVYVLGGSVDRLFfaealpaptfgtpGLLWASLT 402
Cdd:pfam00528 2 IPLGIIAALRRG-----RRLDRLLRPLIDLLQALPSFV-----LAILLVVIAILSILGH-------------GILPAIIL 58
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1100983844 403 LALLAVPVVIVATEEGLARIPRTVREGSLALGATKAETLWKIVLPMASPAMMTGMILAVARAAGEVAPLMLVGVVKLAPS 482
Cdd:pfam00528 59 ALLGWAGYARLIRRAALRSLPSDLVEAARALGASRWQIFRKIILPNALPPILTGLALAFGGALGGAVLLEFLGSWPGLGL 138
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1100983844 483 LPLDGNYpylhldqkimhlgfhIYDVgfqspnveaarPLVYATALLLVLVIATLNLSAVWIRNHL 547
Cdd:pfam00528 139 LLIEAIL---------------GYDY-----------PEIQGPVLAAALILLLLNLLVDILQRLL 177
|
|
| ABC_perm1 |
NF038017 |
ABC transporter permease; Proteins of this family are the permease subunit of an ABC ... |
315-475 |
5.45e-08 |
|
ABC transporter permease; Proteins of this family are the permease subunit of an ABC transporter complex, which may be involved in tungstate uptake.
Pssm-ID: 411610 [Multi-domain] Cd Length: 184 Bit Score: 52.93 E-value: 5.45e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1100983844 315 TLIMAMIVTPFGVLaaVYLREYAKQNTLTRVIriavNNLAGVPAIVYGVFglgffVYVLGGSVDRLFFAEALPAPTfgtp 394
Cdd:NF038017 9 TLIAALIGIPLGAL--LALRRFPGRRLVISLL----NTLMGLPPVVVGLI-----VYLLLSRSGPLGFLGLLYTPT---- 73
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1100983844 395 GLLWASltlALLAVPVVIVATEEGLARIPRTVREGSLALGATKAETLWkIVLPMASPAMMTGMILAVARAAGEVAPLMLV 474
Cdd:NF038017 74 AMIIAQ---AVLALPIVAGLTLAAVQGLDPELRLQILSLGATRWQALW-TLLKEARFALLAAVLAGFGRAISEVGAVMMV 149
|
.
gi 1100983844 475 G 475
Cdd:NF038017 150 G 150
|
|
| Mo_ABC_porter |
TIGR01581 |
NifC-like ABC-type porter; This model describes a clade of ABC porter genes with relatively ... |
390-531 |
6.00e-08 |
|
NifC-like ABC-type porter; This model describes a clade of ABC porter genes with relatively weak homology compared to its neighbor clades, the molybdate (TIGR02141) and sulfate (TIGR00969) porters. Neighbor-Joining, PAM-distance phylogenetic trees support the separation of the clades in this way. Included in this group is a gene designated NifC in Clostridium pasturianum. It would be reasonable to presume that NifC acts as a molybdate porter since the most common form of nitrogenase is a molybdoenzyme. Several other sequences falling within the scope of this model are annotated as molybdate porters and one, from Halobacterium, is annotated as a sulfate porter. There is presently no experimental evidence to support annotations with this degree of specificity.
Pssm-ID: 130643 Cd Length: 225 Bit Score: 53.56 E-value: 6.00e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1100983844 390 TFGTPGLLWASLTLALlavPVVIVATEEGLARIPRTVREGSLALGATKAETLWKIVLPMASPAMMTGMILAVARAAGEV- 468
Cdd:TIGR01581 100 IFSTLGVVLAQTFVAS---PYYVRVARSTFKSVDPRYEDVARSLGAGPLETFRKITLPMARPGLLAGLVLAWARALGEFg 176
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1100983844 469 APLMLVGVVKLAP-SLPLDgnypylhldqkimhlgfhIYdVGFQSPNVEAARP----LVYATALLLVL 531
Cdd:TIGR01581 177 ATLMFAGSIQGKTrTLPLA------------------IY-LNIQSDNIEAAVAsallLLVIAFLLLLV 225
|
|
| TauC |
COG0600 |
ABC-type nitrate/sulfonate/bicarbonate transport system, permease component [Inorganic ion ... |
401-464 |
6.90e-08 |
|
ABC-type nitrate/sulfonate/bicarbonate transport system, permease component [Inorganic ion transport and metabolism];
Pssm-ID: 440365 [Multi-domain] Cd Length: 254 Bit Score: 53.61 E-value: 6.90e-08
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1100983844 401 LTLALLAVPVVIVATEEGLARIPRTVREGSLALGATKAETLWKIVLPMASPAMMTGMILAVARA 464
Cdd:COG0600 130 FVIFLGAFFPILLNTAAGVRSVDPELLELARSLGASRWQILRKVVLPAALPYIFTGLRIALGLA 193
|
|
| cysT |
CHL00187 |
sulfate transport protein; Provisional |
311-474 |
7.73e-08 |
|
sulfate transport protein; Provisional
Pssm-ID: 214388 [Multi-domain] Cd Length: 237 Bit Score: 53.48 E-value: 7.73e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1100983844 311 TVMMTLIMAMIVTPFGVLAAVYLREYakQNTLTRVIRIAVNNLAGVPAIVYGVFGLGffVYVLGGSVDRLFFAEALPAPt 390
Cdd:CHL00187 60 TLSMALIAALINGFFGLLIAWVLVRY--NFPGKRLLDAAVDLPFALPTSVAGLTLAT--VYGDNGWIGHLLSHLGIQIV- 134
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1100983844 391 FGTPGLLWASLTLALlavPVVIVATEEGLARIPRTVREGSLALGATKAETLWKIVLPMASPAMMTGMILAVARAAGEVAP 470
Cdd:CHL00187 135 FTKLGVLLAMIFVSF---PFVVRTIQPVLQEIEKELEEAAWSLGASPWQTFWKVIFPPLIPALLTGLALTFSRAIGEYGS 211
|
....
gi 1100983844 471 LMLV 474
Cdd:CHL00187 212 IVII 215
|
|
| FbpB |
COG1178 |
ABC-type Fe3+ transport system, permease component [Inorganic ion transport and metabolism]; |
284-473 |
8.34e-07 |
|
ABC-type Fe3+ transport system, permease component [Inorganic ion transport and metabolism];
Pssm-ID: 440791 [Multi-domain] Cd Length: 538 Bit Score: 51.70 E-value: 8.34e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1100983844 284 FSKVWEFLSDDpreantegGIFPAIFGTVMMTLIMAMIVTPFGVLAAVYLreyakqnTLT-----RVIRIAVN-NLAgVP 357
Cdd:COG1178 40 LANFWALLSDP--------YLWRALGNTLLLALLVTLLSLLLGVPLAWLL-------ARTdfpgrRLLRWLLLlPLA-LP 103
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1100983844 358 AIVyGVFGlgfFVYVLG--GSVDRLFfAEALPAPTFGTPGLLWASLTLALLAVPVVIVATEEGLARIPRTVREGSLALGA 435
Cdd:COG1178 104 PYV-VALA---WIALFGpnGLLNTLL-RALFGLEPPDIYGLGGIILVLVLFNYPYVYLLLRAALRSIDASLEEAARSLGA 178
|
170 180 190
....*....|....*....|....*....|....*....
gi 1100983844 436 TKAETLWKIVLPMASPAMMTGMILAVARAAGEVA-PLML 473
Cdd:COG1178 179 SPWRAFRRVTLPLLRPAIAAGALLVFLLCLADFGtPLVL 217
|
|
| PotB |
COG1176 |
ABC-type spermidine/putrescine transport system, permease component I [Amino acid transport ... |
419-550 |
1.14e-05 |
|
ABC-type spermidine/putrescine transport system, permease component I [Amino acid transport and metabolism];
Pssm-ID: 440789 [Multi-domain] Cd Length: 287 Bit Score: 47.45 E-value: 1.14e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1100983844 419 LARIPRTVREGSLALGATKAETLWKIVLPMASPAMMTGMILAVARAAGE-VAPLMLVGvvklapslpldgnypylhldQK 497
Cdd:COG1176 177 LEKIDPSLLEAARDLGASPWQTFRRVILPLSLPGIIAGSLLVFIPALGAfVTPALLGG--------------------GK 236
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|...
gi 1100983844 498 IMHLGFHIYDVGFQSPNveaaRPLVYATALLLVLVIATLNLSAVWIRNHLREK 550
Cdd:COG1176 237 VLMIGNLIYQQFLSALN----WPLAAALAVVLLLIVLLVLLLYLRLLRRRRLL 285
|
|
| PRK10782 |
PRK10782 |
D-methionine ABC transporter permease MetI; |
308-454 |
5.00e-05 |
|
D-methionine ABC transporter permease MetI;
Pssm-ID: 182726 Cd Length: 217 Bit Score: 44.72 E-value: 5.00e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1100983844 308 IFGTVMMTLIMA----MIVTPFGVLAAVYLR-EYAKQNTLTRVIRIAVNNLAGVPAIVYGVFGLGFFVYVLGGSVdrlff 382
Cdd:PRK10782 13 VWETLAMTFVSGffgfVIGLPVGVLLYVTRPgQIIANAKLYRTLSALVNIFRSIPFIILLVWMIPFTRVIVGTSI----- 87
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1100983844 383 aealpaptfgtpGLLWASLTLALLAVPVVIVATEEGLARIPRTVREGSLALGATKAETLWKIVLPMASPAMM 454
Cdd:PRK10782 88 ------------GLQAAIVPLTVGAAPFIARMVENALLEIPTGLIEASRAMGATPMQIVRKVLLPEALPGLV 147
|
|
| modB |
PRK09421 |
molybdate ABC transporter permease subunit; |
399-467 |
2.33e-04 |
|
molybdate ABC transporter permease subunit;
Pssm-ID: 181841 Cd Length: 229 Bit Score: 42.99 E-value: 2.33e-04
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1100983844 399 ASLTLALLAVPVVIVATEEGLARIPRTVREGSLALGATKAETLWKIVLPMASPAMMTGMILAVARAAGE 467
Cdd:PRK09421 95 AALAAAVMAFPLMVRAIRLSLEAVDRKLEQAARTLGASPWRVFFTITLPLTLPGIIAGTVLAFARSLGE 163
|
|
| PRK10971 |
PRK10971 |
sulfate/thiosulfate ABC transporter permease CysT; |
400-467 |
1.15e-03 |
|
sulfate/thiosulfate ABC transporter permease CysT;
Pssm-ID: 182873 Cd Length: 277 Bit Score: 40.89 E-value: 1.15e-03
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1100983844 400 SLTLALLAVPVVIVATEEGLARIPRTVREGSLALGATKAETLWKIVLPMASPAMMTGMILAVARAAGE 467
Cdd:PRK10971 144 AVAMAFTSIPFVVRTVQPVLEELGPEYEEAAETLGATRWQSFRKVVLPELSPALLAGVALSFTRSLGE 211
|
|
| potC |
PRK09500 |
spermidine/putrescine ABC transporter membrane protein; Reviewed |
307-479 |
1.31e-03 |
|
spermidine/putrescine ABC transporter membrane protein; Reviewed
Pssm-ID: 236542 [Multi-domain] Cd Length: 256 Bit Score: 40.74 E-value: 1.31e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1100983844 307 AIFGTVMMTLIMAMIVTPFGVLAAVYLREYAKQNtltrviRIAVNNLAGV----PAIVYGVFGLGFFVYV---LGgsvdr 379
Cdd:PRK09500 58 AAQHSLTMAVFSATFATLIGSLTAVALYRYRFRG------KKFVSGMLFVvmmsPDIVMAISLLVLFMLLgiqLG----- 126
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1100983844 380 lffaealpaptFGTpgLLWASLTLALlavPVVIVATEEGLARIPRTVREGSLALGATKAETLWKIVLPMASPAMMTGMIL 459
Cdd:PRK09500 127 -----------FWS--LLFAHITFCL---PFVVVTVYSRLKGFDVRMLEAAKDLGASEFTILRKIILPLALPAVAAGWLL 190
|
170 180 190
....*....|....*....|....*....|...
gi 1100983844 460 A-------------VARAAGEVAPLMLVGVVKL 479
Cdd:PRK09500 191 SftlslddvvvssfVTGPSYEILPLKIYSMVKV 223
|
|
| UgpA |
COG1175 |
ABC-type sugar transport system, permease component [Carbohydrate transport and metabolism]; |
307-544 |
4.59e-03 |
|
ABC-type sugar transport system, permease component [Carbohydrate transport and metabolism];
Pssm-ID: 440788 [Multi-domain] Cd Length: 298 Bit Score: 39.35 E-value: 4.59e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1100983844 307 AIFGTVMMTLIMAMIVTPFGVLAAVYLREYAKQNTLTRVIRIAVNnlaGVPAIVYGVFGLGFFVYVLGgSVDRLFFAEAL 386
Cdd:COG1175 77 ALGNTLLFTVVSVPLQLVLGLLLALLLNRKLRGRGFFRTLFFLPW---VISPVVVALIWKWLFNPDYG-LLNALLGALGL 152
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1100983844 387 PAPTF-GTPGLLWASLTLALL--AVPVVIVATEEGLARIPRTVREGSLALGATKAETLWKIVLPMASPAMMTGMILAVAR 463
Cdd:COG1175 153 EPINWlGDPSLALPAVIIVTVwkGTGFNMLIFLAGLQSIPRELYEAARIDGASPWQRFRRITLPLLRPTILFVLVLSTIG 232
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1100983844 464 AagevapLMLVGVVKLapslpLDGNYPylhlDQKIMHLGFHIYDVGFQSPNVEaarplvYATALLLVLVIATLNLSAVWI 543
Cdd:COG1175 233 A------LQVFDLVYV-----LTGGGP----GNSTTTLVLYIYQTAFQQFDFG------YASAIAVVLFLIILVLTLLQL 291
|
.
gi 1100983844 544 R 544
Cdd:COG1175 292 R 292
|
|
| PhnE |
TIGR01097 |
phosphonate ABC transporter, permease protein PhnE; Phosphonates are a class of compound ... |
304-454 |
9.60e-03 |
|
phosphonate ABC transporter, permease protein PhnE; Phosphonates are a class of compound analogous to organic phosphates, but in which the C-O-P linkage is replaced by a direct, stable C-P bond. Some bacteria can utilize phosphonates as a source of phosphorus. This family consists of permease proteins of known or predicted phosphonate ABC transporters. Often this protein is found as a duplicated pair, occasionally as a fused pair. Certain "second" copies score in between the trusted and noise cutoff and should be considered true hits (by context). [Transport and binding proteins, Anions]
Pssm-ID: 273441 [Multi-domain] Cd Length: 250 Bit Score: 37.91 E-value: 9.60e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1100983844 304 IFPAIFGTVMM----TLIMAMIVTPFGVLAAvylREYAKQNTLTRVIRIAVNNLAGVPAIVYGVFglgfFVYVLGgsvdr 379
Cdd:TIGR01097 56 ILKALLETLAMailgTVLAAVLAVPLALLAA---RNITPSPWLYGLARLLLNFLRAIPELVWALI----FVAAVG----- 123
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1100983844 380 lffaealpaptfgtPGLLWASLTLALLAVPVVIVATEEGLARIPRTVREGSLALGATKAETLWKIVLPMASPAMM 454
Cdd:TIGR01097 124 --------------LGPFAGVLALAFHTVGFLGKLFAEAIEEVDPGPVEALRATGASKLQVIRYGVLPQVLPQFL 184
|
|
| |
