|
Name |
Accession |
Description |
Interval |
E-value |
| TonB_rec_PqqU |
NF041535 |
TonB-dependent receptor PqqU; |
1-671 |
0e+00 |
|
TonB-dependent receptor PqqU;
Pssm-ID: 469420 [Multi-domain] Cd Length: 673 Bit Score: 1323.55 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1104735689 1 MIVSATPvshGLSELDTPAAVSVVYGEDMRRAQPQVNLSEGLAGVPGLQILNRQNYAQDLQLSIRGFGSRSTFGVRGIRI 80
Cdd:NF041535 1 VVVAAPP---GLSELDTPAAVSVVNGDDMRQAAPQINLSESLGSVPGLQIQNRQNYAQDLQLSIRGFGSRSTYGVRGVRI 77
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1104735689 81 YVDGIPATMPDGQGQTSNIDIGSIDHVDVLRGPFSALYGNSSGGVINVVTKKGQQPDTLKAGSWYGSYGSWRNSLQASGS 160
Cdd:NF041535 78 YVDGIPATMPDGQGQTSNIDLNSVDHVEVLRGPFSALYGNASGGVINVTTQTGSQPPTLEAGSYYGSYGSWRNGVKASGA 157
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1104735689 161 TGDGTHAGDVDYTASVSRFTTHGYRDHSGASKNLANARLGVRIDDDSTLTLLVNSTHIQADDPGGLTPGEWRANPEQvAP 240
Cdd:NF041535 158 TGDGTHAGDVNYTVSASRFTTHGYRDHSGAQKNLGNAKLGVRIDDVSTLTLLFNSVDIDANDPGGLTESEWRDNPRQ-AP 236
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1104735689 241 NVTLYNARKTVDQTQAGLHYERSFGDNDDLSVMTYAGIRETTQYQSIPSTAQTKSQKFG-VIDLTRHYQGIDTRWTHRDT 319
Cdd:NF041535 237 RADQYNTRKTVKQTQAGLRYQRQMSENDDLSVMTYAGERETTQYQSIPVAPQLNPTHAGgVIDLTRHYQGIDTRWTHRGE 316
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1104735689 320 LFSLPVSATVGLDYETMSEQRKGYQNFTQ----TDLGQKGALRRDETNLMWNLDPYFQTAWQLSDKWSLDAGVRLSTISF 395
Cdd:NF041535 317 LGSVPVTLTGGLDYETMTEQRKGYENFTLnngvPELGEKGALRRNERNLMWNLDPYLQTSWQLTDKLTLDAGVRYSTVWF 396
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1104735689 396 DSDDHYL--ANGDDSGDKRYHQWLPAASLKYAIDDSWNTYLSAGKGFETPTITELSNRPDGKSGLNLGLKPSTNKTIEWG 473
Cdd:NF041535 397 DSNDHYItaGNGDDSGDASYHKWLPAGSLKYAVTDAWNVYLSAGRGFETPTINELSYRSDGQSGLNFGLKPSTSNTVELG 476
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1104735689 474 TKKRIGYGLLNAAVFQTDTRNEIVSADNNEGRATYKNAGQTRRRGLELGFEQQFAGDWQLTTSWTLLDARYRSNACaGTG 553
Cdd:NF041535 477 SKTRIGNGLLTAALFQTDTDNEIVVDSSSGGRTSYKNAGKTRRRGLELGLDQQFAYDWRLKMAWTLLDATYRSNVC-GAS 555
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1104735689 554 SDCTGNRIPGIARNMGYLGLEYAPYSGWYGGADIRYMSNIEADDPNTVSAPSYTVSSLNTGYKWLVDNWTVDLSGRIDNL 633
Cdd:NF041535 556 QDCNGNRIPGIARNMGYASLGWQPEEGWYAGADVRYMSDIQANDENTAQAPSYTVVGLNTGYKFNWDNWTLDLFGRVDNL 635
|
650 660 670
....*....|....*....|....*....|....*...
gi 1104735689 634 FNRKYVGSVIVNESNGRYYESAPGRNYGVGLNVSYAFR 671
Cdd:NF041535 636 FDRRYVGSVIVNESNGRYYEPAPGRNYGVGLTLSYAFE 673
|
|
| FecA |
COG4772 |
Outer membrane receptor for Fe3+-dicitrate [Inorganic ion transport and metabolism]; |
1-668 |
0e+00 |
|
Outer membrane receptor for Fe3+-dicitrate [Inorganic ion transport and metabolism];
Pssm-ID: 443804 [Multi-domain] Cd Length: 681 Bit Score: 542.21 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1104735689 1 MIVSATPVSHGlSELDTPAAVSVVYGEDMRRaQPQVNLSEGLAGVPGLQILNRQNYAQDLQLSIRGFGSRstfGVRGIRI 80
Cdd:COG4772 26 VVVTGSRAAEA-RLKDVPGSVSVVDREELEN-QAATSLREVLRRVPGVNVQEEDGFGLRPNIGIRGLGPR---RSRGITL 100
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1104735689 81 YVDGIPATMP---DGQGQTSNiDIGSIDHVDVLRGPFSALYG-NSSGGVINVVTKKGQQPDTLKAGSWYGSYGSWRNSLQ 156
Cdd:COG4772 101 LEDGIPIAPApygDPAAYYFP-DLERMERIEVLRGAAALRYGpQTVGGAINFVTRTIPTAFGGELRVTGGSFGYRRTHAS 179
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1104735689 157 ASGStgdgthAGDVDYTASVSRFTTHGYRDHSGASKNLANARLGVRIDDDSTLTLLVNSTHIQADDPGGLTPGEWRANPE 236
Cdd:COG4772 180 VGGT------VGNFGYLVEYSRKRGDGFRDNSGFDINDFNAKLGYRLSDRQELTLKFQYYDEDANTPGGLTDAQFDADPR 253
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1104735689 237 QVAPNvtlyNARKTVDQTQAGLHYERSFGDNDDLSVMTYAGIRETTQYqsIPSTAQTKSQKFGVIDL---TRHYQGIDTR 313
Cdd:COG4772 254 QSYRP----ADQFDTRRTQLSLRYEHQLSDNTTLTTTAYYNDFSRNWY--IRQNTADPNTPGLGLRGnprGYRSYGIEPR 327
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1104735689 314 WTHRDTLFSLPVSATVGLDYETMSEQRKGYQNFtqTDLGQKGA-LRRDETNLMWNLDPYFQTAWQLSDKWSLDAGVRLST 392
Cdd:COG4772 328 LTHRFELGGVPHTLEVGLRYHREEEDRKQYVNT--YGQGRSGAgLRRDRRFSADALAAYAQNRFELTGRLTLTPGLRYEH 405
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1104735689 393 ISFDSDDHY--LANGDDSGDKRYHQWLPAASLKYAIDDSWNTYLSAGKGFETPTITELSNRpdgkSGLNLGLKPSTNKTI 470
Cdd:COG4772 406 IRRDRTDRYstRTGGDDSGSNSYSEFLPGLGLLYQLTDNLQLYANVSRGFEPPTFGDLAYG----NGGNPDLKPEKSWNY 481
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1104735689 471 EWGTKKRIGYGL-LNAAVFQTDTRNEIVSADNNEG-RATYKNAGQTRRRGLELGFEQQFAG----DWQLTTSWTLLDARY 544
Cdd:COG4772 482 ELGTRGRIGNGLsAEVALFYIDYDNELGSCSAAGGdRSTFTNAGETRHQGLELALDYDLLKggglGLPLFAAYTYTDAEF 561
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1104735689 545 RSNacagTGSDCTGNRIPGIARNMGYLGLEYApYSGWYGGADIRYMSNIEADDPNTVS------APSYTVSSLNTGYKWl 618
Cdd:COG4772 562 TSD----FGPVFAGNRLPYVPRHQLTAGLGYE-HGGWTANLNGRYVSEQFTDAANTVAdgsfgkIPSYTVLDLSASYDF- 635
|
650 660 670 680 690
....*....|....*....|....*....|....*....|....*....|
gi 1104735689 619 vdNWTVDLSGRIDNLFNRKYVGSVIVNESNGryYESAPGRNYGVGLNVSY 668
Cdd:COG4772 636 --GKNLSLFAGVNNLFDKRYIASRAPNYAAG--IRPGPPRTVYAGLRLKF 681
|
|
| ligand_gated_channel |
cd01347 |
TonB dependent/Ligand-Gated channels are created by a monomeric 22 strand (22,24) ... |
21-670 |
4.19e-76 |
|
TonB dependent/Ligand-Gated channels are created by a monomeric 22 strand (22,24) anti-parallel beta-barrel. Ligands apparently bind to the large extracellular loops. The N-terminal 150-200 residues form a plug from the periplasmic end of barrel. Energy (proton-motive force) and TonB-dependent conformational alteration of channel (parts of plug, and loops 7 and 8) allow passage of ligand. FepA residues 12-18 form the TonB box, which mediates the interaction with the TonB-containing inner membrane complex. TonB preferentially interacts with ligand-bound receptors. Transport thru the channel may resemble passage thru an air lock. In this model, ligand binding leads to closure of the extracellular end of pore, then a TonB-mediated signal facillitates opening of the interior side of pore, deforming the N-terminal plug and allowing passage of the ligand to the periplasm. Such a mechanism would prevent the free diffusion of small molecules thru the pore.
Pssm-ID: 238657 [Multi-domain] Cd Length: 635 Bit Score: 256.22 E-value: 4.19e-76
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1104735689 21 VSVVYGEDMRRaQPQVNLSEGLAGVPGLQIlNRQNYAQDLQLSIRGFGSRSTfgvrgiRIYVDGIPATMPDGQG--QTSN 98
Cdd:cd01347 2 VSVITAEDIEK-QPATSLADLLRRIPGVSV-TRGGGGGGSTISIRGFGPDRT------LVLVDGLPLASSNYGRgvDLNT 73
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1104735689 99 IDIGSIDHVDVLRGPFSALYGNSS-GGVINVVTKKGQQPDtlkAGSWYGSYGSWRNSLQASGS---TGDGTHAGDVDYTA 174
Cdd:cd01347 74 IPPELIERVEVLKGPSSALYGSGAiGGVVNIITKRPTDEF---GGSVTAGYGSDNSGSSGGGGfdvSGALADDGAFGARL 150
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1104735689 175 SVSRFTTHGYRDHSGASKNLANARLGV------RIDDDSTLTLLVNSTHIQADDPGGLTPGEWRANPEQVAPNVTLYNAR 248
Cdd:cd01347 151 YGAYRDGDGTIDGDGQADDSDEERYNVagkldwRPDDDTRLTLDAGYQDQDADGPGGTLPANGTGSSLGGGPSSNTNGDR 230
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1104735689 249 K---------------------TVDQTQAGLHYERSFGDNDDLSVMTYAGIRETTQYQSIPSTAQTKSQKfgvidltrhy 307
Cdd:cd01347 231 DwdyrdryrkraslglehdlndTGWTLRANLSYSYTDNDGDPLILNGGNNAAGGDLGRSGYSSERDTTQL---------- 300
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1104735689 308 qGIDTRWTHRDTLFSLPVSATVGLDYetmseqRKGYQNFTQTDLgqkgalrrdetnlmwnldpYFQTAWQLSDKWSLDAG 387
Cdd:cd01347 301 -GFDAGLNAPFGTGPVAHTLTLGVEY------RREELDEKQTAL-------------------YAQDTIELTDDLTLTLG 354
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1104735689 388 VRLSTISFDSDDHylANGDDSGDKRYHQWLPAASLKYAIDDSWNTYLSAGKGFETPTITELSNRPDGKSGLNLG---LKP 464
Cdd:cd01347 355 LRYDHYDQDSKDT--IAGGTTAKKSYSHWSPSLGLVYKLTDGLSLYASYSQGFRAPSLGELYGGGSHGGTAAVGnpnLKP 432
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1104735689 465 STNKTIEWGTKKRIGYGL-LNAAVFQTDTRNEIVSADNNEGRAT---YKNAGQTRRRGLELGFEQQFAGDWQLTTSWTLL 540
Cdd:cd01347 433 EKSKQYELGLKYDPGDGLtLSAALFRIDIKNEIVSTPTNTGLGLvtvYVNGGKARIRGVELEASYDLTDGLGLTGSYTYT 512
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1104735689 541 DARYRSnacagTGSDCTGNRIPGIARNMGYLGLEY-APYSGWYGGADIRY---MSNIEADDPNTVSAPSYTVSSLNTGYK 616
Cdd:cd01347 513 DTEVKR-----TDGATTGNRLPGIPKHTANLGLDYeLPDEGLTAGGGVRYrgkQYADTANGNNTVKVPGYTLVDLSASYQ 587
|
650 660 670 680 690
....*....|....*....|....*....|....*....|....*....|....
gi 1104735689 617 WlvdNWTVDLSGRIDNLFNRKYVGSVIVNESNGRYYEsAPGRNYGVGlnVSYAF 670
Cdd:cd01347 588 F---TKNLTLRLGVNNLFDKDYYTSLSVRGSGLYGYY-GPGRTYYLS--VSYKF 635
|
|
| TonB-siderophor |
TIGR01783 |
TonB-dependent siderophore receptor; This subfamily model encompasses a wide variety of ... |
16-670 |
1.48e-54 |
|
TonB-dependent siderophore receptor; This subfamily model encompasses a wide variety of TonB-dependent outer membrane siderophore receptors. It has no overlap with TonB receptors known to transport other substances, but is likely incomplete due to lack of characterizations. It is likely that genuine siderophore receptors will be identified which score below the noise cutoff to this model at which point the model should be updated. [Transport and binding proteins, Cations and iron carrying compounds, Transport and binding proteins, Porins]
Pssm-ID: 273805 [Multi-domain] Cd Length: 651 Bit Score: 197.64 E-value: 1.48e-54
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1104735689 16 DTPAAVSVVYGEDMRRAQPQVnLSEGLAGVPGLQILNRQNYAQDLQLSIRGFGSRSTFGVrgirIYVDGIPATmpdGQGQ 95
Cdd:TIGR01783 1 DIPQSVSVITRQELEDQQAGS-LSEALQRVPGVVVGGSGGTTQFGNITIRGFGLEVDIDN----VYLDGVPLL---SRGN 72
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1104735689 96 TSNIDIGSIDHVDVLRGPFSALYGNSS-GGVINVVTKKGQQ----PDTLKAGSWYGSYGSWRNSLQASGStgdgthaGDV 170
Cdd:TIGR01783 73 LAIVDPAMVERVEVLRGPASLLYGGSApGGVINIVTKRPQDepkgSVTFGAGTRSGYRTAFDLGGPLGAD-------GTF 145
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1104735689 171 DYTASVSRFTTHGYRDHSGASKNLANARLGVRIDDDSTLTLLVNSTHIQADDPGGLTPGEWRANPEQVAPNVTLYNARKT 250
Cdd:TIGR01783 146 RGRLNGARQDGDSFYDGAGEETRLGATATDWQLDDRTLLRLGAYYQKERDRGGYGGLPASGGTSGRDLSSDRYLGTSSNR 225
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1104735689 251 V----DQTQAGLHYERSFGDN-------------DDLSVMTYAGIRETTQYQSIPSTAQTKSQKFGVIDLTrhYQGIDTR 313
Cdd:TIGR01783 226 NyddrEYLSYGLSLEYQFNDVwtgkqnlrysyfdTDSNQVQASGYSSDGGLFGRSLTVVNVKQDRVQIDAG--LDGEFET 303
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1104735689 314 WTHRDTLFSLPVSATVG------LDYETMSEQRKGYQNFTQTDLGQKGALRRDeTNLMWNLDPYFQTAWQLSDKWSLDAG 387
Cdd:TIGR01783 304 GPIEHDLLLGVSYGQRTtnrfnnTGYPSDNIYSLTATSSARTDIGDSPKDRAL-SSTTKALNGVALQRILLADKWTLTLG 382
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1104735689 388 VRLSTISFDSDDHylaNGDDSGDKRYHQWLPAASLKYAIDDSWNTYLSAGKGFETPTITELSNRPDGKsglnlGLKPSTN 467
Cdd:TIGR01783 383 GRYDSVDVKSNNG---VAGSTGKRDDSQFTPSLGVAYKPTDDWSLYASYAESFKPGGYYPKGAGNSGD-----ILEPEKG 454
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1104735689 468 KTIEWGTKKRIGYGLL-NAAVFQTDTRNEIVSADNNEgrATYKNAGQTRRRGLELGFEQQFAGDWQLTTSWTLLDARYRS 546
Cdd:TIGR01783 455 KNYELGVRYDLGDSLLaTAALFRITKDNQLVQDPVNG--TFSVNAGKTRNRGVELEARGYLTPGLSLSAGYTYTDAEFTE 532
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1104735689 547 nacaGTGSDCTGNRIPGIARNMGYLGLEYAPYSGWYG---GADIRYMSNIEADDPNTVSAPSYTVSSLNTGYKW-LVDNW 622
Cdd:TIGR01783 533 ----DTNGDTQGNTVPFVPKHTASLWASYAPPVGDNGltlGGGVQYTGKAYVDGGNTGKVPSYTVVDLSVRYDLtKKKNL 608
|
650 660 670 680
....*....|....*....|....*....|....*....|....*....
gi 1104735689 623 TVDLSgrIDNLFNRKYVGSVIVNESN-GRYYEsaPGRNygVGLNVSYAF 670
Cdd:TIGR01783 609 TLALN--VNNLFDRDYYTSGYRWGPSaYIYPG--APRT--VGLSVSYDF 651
|
|
| TonB_dep_Rec |
pfam00593 |
TonB dependent receptor; This model now only covers the conserved part of the barrel structure. |
200-667 |
3.98e-47 |
|
TonB dependent receptor; This model now only covers the conserved part of the barrel structure.
Pssm-ID: 395474 [Multi-domain] Cd Length: 475 Bit Score: 173.42 E-value: 3.98e-47
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1104735689 200 GVRIDDDSTLTLLVNSTHIQADDPGGLTPGEWRANPEQVAPNVTLY-NARKTVDQTQAGLHYERSFGDNDDLSVmtyaGI 278
Cdd:pfam00593 6 LDLLGDDTLLTLGYDYSRYTDGLDLGLTLDGYGNDGGYLGDRPLYYgRDYSDTDRKRLSLGYDYDLGDGLSWLS----TL 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1104735689 279 RETTQYQSIPSTAQTKSQKFGVIDLTRHYQGIDTRWTHRDTL---FSLPVSATVGLDYETMSEQRKGYQNFTQTDLGQKG 355
Cdd:pfam00593 82 RLGLRYSSLDGDYTSNSSGLSGAGDYLSDDRLYGLYGLDGDLelsLDLSHDLLLGVELRTAGLDYRRLDDDAYDPYDPAN 161
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1104735689 356 ALRRDETNL-MWNLDPYFQTAWQLSDKWSLDAGVRLSTISFDSDDHYlaNGDDSGDKRYHQWLPAASLKYAIDDSWNTYL 434
Cdd:pfam00593 162 PSSSSYSDTtTDSYGLYLQDNIKLTDRLTLTLGLRYDHYSTDGDDGN--GGGDNFSRSYSAFSPRLGLVYKPTDNLSLYA 239
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1104735689 435 SAGKGFETPTITELSNRPDGKSGL-----NLGLKPSTNKTIEWGTKKRIGYGLLNAAVFQTDTRNEIVSADNNEGRA--- 506
Cdd:pfam00593 240 SYSRGFRAPSLGELYGSGSGGGGGavaggNPDLKPETSDNYELGLKYDDGRLSLSLALFYIDIKNLITSDPDGPGLGgtv 319
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1104735689 507 -TYKNAGQTRRRGLELGFEQQFAGDWQLTTSWTLLDARYRSNAcagtgsDCTGNRIPGIARNMGYLGLEYAPYSG-WYGG 584
Cdd:pfam00593 320 yTYTNVGKARIRGVELELSGRLWGLGLSGGGYTYTDADDDADA------DDTGNPLPNVPRHTANLGLTYDFPLGgWGAR 393
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1104735689 585 ADIRYM---SNIEADDPNTVSAPSYTVSSLNTGYKwLVDNWTvdLSGRIDNLFNRKYVGSVIVNESNGRYYeSAPGRNYG 661
Cdd:pfam00593 394 LGARYVgsgERRYGDAANTFKTPGYTLVDLSAGYR-LNKNLT--LRLGVNNLFDKYYKRYYSSGGGNLGGY-PGPGRTFY 469
|
....*.
gi 1104735689 662 VGLNVS 667
Cdd:pfam00593 470 LGLSYK 475
|
|
| PRK10044 |
PRK10044 |
ferrichrome outer membrane transporter; Provisional |
17-641 |
2.50e-21 |
|
ferrichrome outer membrane transporter; Provisional
Pssm-ID: 236643 [Multi-domain] Cd Length: 727 Bit Score: 99.06 E-value: 2.50e-21
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1104735689 17 TPAAVSVVYGEDMRRAQPQvNLSEGLAGVPGLQILNRQNYAQDLQLSIRGFGSRSTfgvrGIRIYVDGIPAtmpdgQGQT 96
Cdd:PRK10044 79 TPQSISVVTAEEMALHQPK-SVKEALSYTPGVSVGTRGASNTYDHLIIRGFAASGQ----SQNNYLDGLKL-----QGNF 148
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1104735689 97 SN---IDIGSIDHVDVLRGPFSALYGNSS-GGVINVVTKKgQQPDTLKAGSW-YGSYGSWRNSLQASGSTGDgthAGDVD 171
Cdd:PRK10044 149 YNdavIDPYMLERAELMRGPVSVLYGKSNpGGLLNMVSKR-PTTEPLKEVQFkMGTDNLFQTGFDFSDALDD---DGVYS 224
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1104735689 172 YtasvsRFTTHGyRDHSGASKNLANARLGV------RIDDDSTLTLLvnsTHIQaDDPG----GLTPGEWRANPeqvapn 241
Cdd:PRK10044 225 Y-----RLTGLA-RSANAQQKGSEEQRYAIapsftwRPDDKTNFTFL---SYFQ-NEPEtgyyGWLPKEGTVEP------ 288
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1104735689 242 vtLYNARK--------------TVDQTQAGLHYERSFGDN--------------------------DDLSVMTYAGIRET 281
Cdd:PRK10044 289 --LPNGKRlptdfnegaknntySRNEKMVGYSFDHEFNDTftvrqnlryaenktsqrsvygygvcsDKGHYLNRGYVVDD 366
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1104735689 282 TQYQSIPSTAQTKSqKF--GVIDLTRhYQGIDTRWTHRD------TLFSLPVSATVGLDYETMseqrkgyqNFTQTDLGQ 353
Cdd:PRK10044 367 EKLQNFSVDTQLQS-KFatGDVDHTL-LTGVDFMRMRNDinawfgYADSVPLLNLYGPVNTDF--------DFNANSGPY 436
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1104735689 354 KGALRRDETNLmwnldpYFQTAWQLsDKWSLDAGVR---LSTISFDSDDHYLANGDDsgdkryHQWLPAASLKYAIDDSW 430
Cdd:PRK10044 437 QILNKQKQTGL------YVQDQAEW-DKWLVTLGGRydwADQSSLNRVNGTTDKRDD------KQFTWRGGVNYLFDNGI 503
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1104735689 431 NTYLSAGKGFETPTITELSNRPdgksglnlgLKPSTNKTIEWGTK-----KRIgygLLNAAVFQ-TDTRNeiVSADNNEG 504
Cdd:PRK10044 504 TPYFSYSESFEPSSGTGKDGNI---------FAPSKGKQYEAGVKyvpkdRPI---VVTGAVYQlTKTNN--LTADPENS 569
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1104735689 505 RATYKNaGQTRRRGLELGFEQQFAGDWQLTTSWTLLDARYRsnacagTGSDCTGNRIPGIARNMGYLGLEY----APYSG 580
Cdd:PRK10044 570 FFSVQG-GEIRARGVELEAKAALSANVNVTGSYTYTDAEYT------TDTTYKGNTPAQVPKHMASLWADYtffdGPLSG 642
|
650 660 670 680 690 700
....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1104735689 581 WYGGADIRYMSNIEADDPNTVSAPSYTVSSLNTGYkwlvDNWTVDLSG-----RIDNLFNRKYVGS 641
Cdd:PRK10044 643 LTLGTGGRYTGSSYGDPANSFKVGSYTVVDALVKY----DLARFGMAGssvalNVNNLFDREYVAS 704
|
|
| |
|
Name |
Accession |
Description |
Interval |
E-value |
| TonB_rec_PqqU |
NF041535 |
TonB-dependent receptor PqqU; |
1-671 |
0e+00 |
|
TonB-dependent receptor PqqU;
Pssm-ID: 469420 [Multi-domain] Cd Length: 673 Bit Score: 1323.55 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1104735689 1 MIVSATPvshGLSELDTPAAVSVVYGEDMRRAQPQVNLSEGLAGVPGLQILNRQNYAQDLQLSIRGFGSRSTFGVRGIRI 80
Cdd:NF041535 1 VVVAAPP---GLSELDTPAAVSVVNGDDMRQAAPQINLSESLGSVPGLQIQNRQNYAQDLQLSIRGFGSRSTYGVRGVRI 77
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1104735689 81 YVDGIPATMPDGQGQTSNIDIGSIDHVDVLRGPFSALYGNSSGGVINVVTKKGQQPDTLKAGSWYGSYGSWRNSLQASGS 160
Cdd:NF041535 78 YVDGIPATMPDGQGQTSNIDLNSVDHVEVLRGPFSALYGNASGGVINVTTQTGSQPPTLEAGSYYGSYGSWRNGVKASGA 157
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1104735689 161 TGDGTHAGDVDYTASVSRFTTHGYRDHSGASKNLANARLGVRIDDDSTLTLLVNSTHIQADDPGGLTPGEWRANPEQvAP 240
Cdd:NF041535 158 TGDGTHAGDVNYTVSASRFTTHGYRDHSGAQKNLGNAKLGVRIDDVSTLTLLFNSVDIDANDPGGLTESEWRDNPRQ-AP 236
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1104735689 241 NVTLYNARKTVDQTQAGLHYERSFGDNDDLSVMTYAGIRETTQYQSIPSTAQTKSQKFG-VIDLTRHYQGIDTRWTHRDT 319
Cdd:NF041535 237 RADQYNTRKTVKQTQAGLRYQRQMSENDDLSVMTYAGERETTQYQSIPVAPQLNPTHAGgVIDLTRHYQGIDTRWTHRGE 316
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1104735689 320 LFSLPVSATVGLDYETMSEQRKGYQNFTQ----TDLGQKGALRRDETNLMWNLDPYFQTAWQLSDKWSLDAGVRLSTISF 395
Cdd:NF041535 317 LGSVPVTLTGGLDYETMTEQRKGYENFTLnngvPELGEKGALRRNERNLMWNLDPYLQTSWQLTDKLTLDAGVRYSTVWF 396
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1104735689 396 DSDDHYL--ANGDDSGDKRYHQWLPAASLKYAIDDSWNTYLSAGKGFETPTITELSNRPDGKSGLNLGLKPSTNKTIEWG 473
Cdd:NF041535 397 DSNDHYItaGNGDDSGDASYHKWLPAGSLKYAVTDAWNVYLSAGRGFETPTINELSYRSDGQSGLNFGLKPSTSNTVELG 476
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1104735689 474 TKKRIGYGLLNAAVFQTDTRNEIVSADNNEGRATYKNAGQTRRRGLELGFEQQFAGDWQLTTSWTLLDARYRSNACaGTG 553
Cdd:NF041535 477 SKTRIGNGLLTAALFQTDTDNEIVVDSSSGGRTSYKNAGKTRRRGLELGLDQQFAYDWRLKMAWTLLDATYRSNVC-GAS 555
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1104735689 554 SDCTGNRIPGIARNMGYLGLEYAPYSGWYGGADIRYMSNIEADDPNTVSAPSYTVSSLNTGYKWLVDNWTVDLSGRIDNL 633
Cdd:NF041535 556 QDCNGNRIPGIARNMGYASLGWQPEEGWYAGADVRYMSDIQANDENTAQAPSYTVVGLNTGYKFNWDNWTLDLFGRVDNL 635
|
650 660 670
....*....|....*....|....*....|....*...
gi 1104735689 634 FNRKYVGSVIVNESNGRYYESAPGRNYGVGLNVSYAFR 671
Cdd:NF041535 636 FDRRYVGSVIVNESNGRYYEPAPGRNYGVGLTLSYAFE 673
|
|
| FecA |
COG4772 |
Outer membrane receptor for Fe3+-dicitrate [Inorganic ion transport and metabolism]; |
1-668 |
0e+00 |
|
Outer membrane receptor for Fe3+-dicitrate [Inorganic ion transport and metabolism];
Pssm-ID: 443804 [Multi-domain] Cd Length: 681 Bit Score: 542.21 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1104735689 1 MIVSATPVSHGlSELDTPAAVSVVYGEDMRRaQPQVNLSEGLAGVPGLQILNRQNYAQDLQLSIRGFGSRstfGVRGIRI 80
Cdd:COG4772 26 VVVTGSRAAEA-RLKDVPGSVSVVDREELEN-QAATSLREVLRRVPGVNVQEEDGFGLRPNIGIRGLGPR---RSRGITL 100
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1104735689 81 YVDGIPATMP---DGQGQTSNiDIGSIDHVDVLRGPFSALYG-NSSGGVINVVTKKGQQPDTLKAGSWYGSYGSWRNSLQ 156
Cdd:COG4772 101 LEDGIPIAPApygDPAAYYFP-DLERMERIEVLRGAAALRYGpQTVGGAINFVTRTIPTAFGGELRVTGGSFGYRRTHAS 179
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1104735689 157 ASGStgdgthAGDVDYTASVSRFTTHGYRDHSGASKNLANARLGVRIDDDSTLTLLVNSTHIQADDPGGLTPGEWRANPE 236
Cdd:COG4772 180 VGGT------VGNFGYLVEYSRKRGDGFRDNSGFDINDFNAKLGYRLSDRQELTLKFQYYDEDANTPGGLTDAQFDADPR 253
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1104735689 237 QVAPNvtlyNARKTVDQTQAGLHYERSFGDNDDLSVMTYAGIRETTQYqsIPSTAQTKSQKFGVIDL---TRHYQGIDTR 313
Cdd:COG4772 254 QSYRP----ADQFDTRRTQLSLRYEHQLSDNTTLTTTAYYNDFSRNWY--IRQNTADPNTPGLGLRGnprGYRSYGIEPR 327
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1104735689 314 WTHRDTLFSLPVSATVGLDYETMSEQRKGYQNFtqTDLGQKGA-LRRDETNLMWNLDPYFQTAWQLSDKWSLDAGVRLST 392
Cdd:COG4772 328 LTHRFELGGVPHTLEVGLRYHREEEDRKQYVNT--YGQGRSGAgLRRDRRFSADALAAYAQNRFELTGRLTLTPGLRYEH 405
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1104735689 393 ISFDSDDHY--LANGDDSGDKRYHQWLPAASLKYAIDDSWNTYLSAGKGFETPTITELSNRpdgkSGLNLGLKPSTNKTI 470
Cdd:COG4772 406 IRRDRTDRYstRTGGDDSGSNSYSEFLPGLGLLYQLTDNLQLYANVSRGFEPPTFGDLAYG----NGGNPDLKPEKSWNY 481
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1104735689 471 EWGTKKRIGYGL-LNAAVFQTDTRNEIVSADNNEG-RATYKNAGQTRRRGLELGFEQQFAG----DWQLTTSWTLLDARY 544
Cdd:COG4772 482 ELGTRGRIGNGLsAEVALFYIDYDNELGSCSAAGGdRSTFTNAGETRHQGLELALDYDLLKggglGLPLFAAYTYTDAEF 561
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1104735689 545 RSNacagTGSDCTGNRIPGIARNMGYLGLEYApYSGWYGGADIRYMSNIEADDPNTVS------APSYTVSSLNTGYKWl 618
Cdd:COG4772 562 TSD----FGPVFAGNRLPYVPRHQLTAGLGYE-HGGWTANLNGRYVSEQFTDAANTVAdgsfgkIPSYTVLDLSASYDF- 635
|
650 660 670 680 690
....*....|....*....|....*....|....*....|....*....|
gi 1104735689 619 vdNWTVDLSGRIDNLFNRKYVGSVIVNESNGryYESAPGRNYGVGLNVSY 668
Cdd:COG4772 636 --GKNLSLFAGVNNLFDKRYIASRAPNYAAG--IRPGPPRTVYAGLRLKF 681
|
|
| CirA |
COG1629 |
Outer membrane receptor protein, Fe transport [Inorganic ion transport and metabolism]; |
1-652 |
3.90e-123 |
|
Outer membrane receptor protein, Fe transport [Inorganic ion transport and metabolism];
Pssm-ID: 441236 [Multi-domain] Cd Length: 644 Bit Score: 379.94 E-value: 3.90e-123
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1104735689 1 MIVSATPVSHGLSelDTPAAVSVVYGEDMRRaQPQVNLSEGLAGVPGLQILNRQNYAQdlQLSIRGFGSrstfGVRGIRI 80
Cdd:COG1629 4 VVVTATRTDESLQ--DVPGSVSVISREQLED-QPATDLGDLLRRVPGVSVTSAGGGAG--QISIRGFGG----GGNRVLV 74
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1104735689 81 YVDGIPATMPD-GQGQTSNIDIGSIDHVDVLRGPFSALYG-NSSGGVINVVTKKGQQPDTLKAGSWYGSYGSWRNSLQAS 158
Cdd:COG1629 75 LVDGVPLNDPSgGDGGLSYIDPEDIERVEVLRGPSSALYGsGALGGVINIVTKKPKDGKGGEVSASYGSYGTYRASLSLS 154
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1104735689 159 GSTGDgthagdVDYTASVSRFTTHGYRDHSGASKNLANARLGVRIDDDSTLTLLVNSTHIQADDPGGLTPGEW--RANPE 236
Cdd:COG1629 155 GGNGK------LAYRLSASYRDSDGYRDNSDSDRYNLRAKLGYQLGDDTRLTLSASYSDSDQDSPGYLTLAALrpRGAMD 228
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1104735689 237 QVAPNVTLYNARKTVDQTQAGLHYERsFGDNDDLSVMTYAGIRETTQYQSIPSTAQTKSQKFGVIDLTRHYqGIDTRWTH 316
Cdd:COG1629 229 DGTNPYSNDTDDNTRDRYSLSLEYEH-LGDGLKLSASAYYRYDDTDLDSDFTPTPADGGTLEQTDFDNRTY-GLELRLTY 306
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1104735689 317 RDTlFSLPVSATVGLDYETMSEQRKGYQNFTQTDLGQKGALRRDETNLMWNLDPYFQTAWQLSDKWSLDAGVRLSTISFD 396
Cdd:COG1629 307 DLG-FGGKHTLLVGLDYQRQDLDGSGYPLDLGSGSLPTLTSGADDDGTTTSLALYAQDTYKLTDKLTLTAGLRYDYVSYD 385
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1104735689 397 SDDHYLANGDDSGDKRYHQWLPAASLKYAIDDSWNTYLSAGKGFETPTITELSNRP-DGKSGLNLGLKPSTNKTIEWGTK 475
Cdd:COG1629 386 VDDTVTGTDSASGSRSYSAFSPSLGLTYQLSPNLSLYASYSRGFRAPTFGELYANGtDPYSVGNPDLKPETSTNYELGLR 465
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1104735689 476 KRIGYG--LLNAAVFQTDTRNEIVS---ADNNEGRATYKNAGQTRRRGLELGFEQQFAGDWQLTTSWTLLDARYRSNACA 550
Cdd:COG1629 466 YRLLDGrlSLSLALFYSDVDNEILSvplPNDSGFSTYYTNAGKARSYGVELELSYQLTPGLSLNASYSYTDAKFDDDTDG 545
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1104735689 551 GTGSDctGNRIPGIARNMGYLGLEYAPYSGWYGGADIRYMSNIEADDPNTVSAP-SYTVSSLNTGYKWLvDNWTVDLsgR 629
Cdd:COG1629 546 SADLD--GNRLPGVPPLTANLGLTYEFPGGWSLGLGVRYVGDRYLDDANTQGAPgGYTLVDLGAGYRFG-DNLTLSL--G 620
|
650 660
....*....|....*....|...
gi 1104735689 630 IDNLFNRKYVGSVIVNESNGRYY 652
Cdd:COG1629 621 VDNLFDKKYATSLSVRASNVRGF 643
|
|
| Fiu |
COG4774 |
Outer membrane receptor for monomeric catechols [Inorganic ion transport and metabolism]; |
15-668 |
1.72e-82 |
|
Outer membrane receptor for monomeric catechols [Inorganic ion transport and metabolism];
Pssm-ID: 443806 [Multi-domain] Cd Length: 639 Bit Score: 273.29 E-value: 1.72e-82
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1104735689 15 LDTPAAVSVVYGEDMRRAQPQvNLSEGLAGVPGLQILNRQNYAQDlQLSIRGFGSRSTfgvrgirIYVDGIPatmpdgQG 94
Cdd:COG4774 7 LDTPQSVTVVTRELIEDQGAT-SLADALRNVPGVTFGAGEGGNGD-SFSIRGFSASGD-------IYVDGLR------DP 71
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1104735689 95 QTSNIDIGSIDHVDVLRGPFSALYGNSS-GGVINVVTKKGQQPDTLKAGSWYGSYGSWRNSLQASGSTGDgthagDVDYT 173
Cdd:COG4774 72 GQYRRDTFNLERVEVLKGPASVLYGRGSpGGVINLVTKRPTDEPFTEVTLTYGSDGQRRATLDVNGPLGD-----DLAYR 146
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1104735689 174 ASVSRFTTHGYRDHSGASKNLANARLGVRIDDDSTLTLLVNSTHiQADDPGGLTPGEWRANPEQVAPNvTLY---NARKT 250
Cdd:COG4774 147 LNGMYRDSDSYRDGVDNDRWGIAPSLTWRLGDRTRLTLDYEYQD-DDRTPDYGVPAVANGRPVDVDRS-TFYgqpDDYSD 224
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1104735689 251 VDQTQAGLHYERSFGDNDDLSVMTYAGIRETTQYQSIPSTAQTK---SQKFGVIDLTRHYQGIDTRWTHRDTLFSLPVSA 327
Cdd:COG4774 225 SETDSATLRLEHDFNDNWTLRNALRYSDYDRDYRNTYPTGGNATgtvTRSAYRRDQDNDTLSNQTDLTGKFDTGGVKHTL 304
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1104735689 328 TVGLDYETMSEQRKGYQNFTQTD------------LGQKGALRRDETNLMWNLDPYFQTAWQLSDKWSLDAGVRLSTISF 395
Cdd:COG4774 305 LAGVEYSREDSDNARYSGGGTAPtvnlynpvygapVTGPTLGGADNDSRTDTTGLYLQDTISLTDRWSLLAGLRYDRFDT 384
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1104735689 396 DSDDHylANGDDSGDKRYHQWLPAASLKYAIDDSWNTYLSAGKGFeTPTITELSNRPDGKSglnlgLKPSTNKTIEWGTK 475
Cdd:COG4774 385 DYTDR--TTGATTSSYDDSAFSPRAGLVYKPTPNLSLYASYSTSF-NPGGGAPSLSNAGQA-----LDPEKSRQYEVGVK 456
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1104735689 476 KRI--GYGLLNAAVFQTDTRNEIVSADNNEGraTYKNAGQTRRRGLELGFEQQFAGDWQLTTSWTLLDARYRSNACAGTg 553
Cdd:COG4774 457 WDLldGRLSLTAALFRIEKTNVRTTDPANPG--VYVQTGEQRSRGVELEATGELTPGWSVLAGYTYLDAEITKSANAAN- 533
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1104735689 554 sdcTGNRIPGIARNMGYLGLEYA-PYSGWYGGADIRYMSNIEADDPNTVSAPSYTVSSLNTGYKWLvDNWTVDLsgRIDN 632
Cdd:COG4774 534 ---VGNRLPNVPRHSASLWTTYDlPLPGLTLGGGVRYVGSRYADAANTVKLPSYTRFDAGASYRLN-KNLTLRL--NVNN 607
|
650 660 670
....*....|....*....|....*....|....*.
gi 1104735689 633 LFNRKYVGSVIvneSNGRYYESAPgRNYGVGLNVSY 668
Cdd:COG4774 608 LTDKRYYASAY---GSGYVTPGAP-RTVLLSASYRF 639
|
|
| ligand_gated_channel |
cd01347 |
TonB dependent/Ligand-Gated channels are created by a monomeric 22 strand (22,24) ... |
21-670 |
4.19e-76 |
|
TonB dependent/Ligand-Gated channels are created by a monomeric 22 strand (22,24) anti-parallel beta-barrel. Ligands apparently bind to the large extracellular loops. The N-terminal 150-200 residues form a plug from the periplasmic end of barrel. Energy (proton-motive force) and TonB-dependent conformational alteration of channel (parts of plug, and loops 7 and 8) allow passage of ligand. FepA residues 12-18 form the TonB box, which mediates the interaction with the TonB-containing inner membrane complex. TonB preferentially interacts with ligand-bound receptors. Transport thru the channel may resemble passage thru an air lock. In this model, ligand binding leads to closure of the extracellular end of pore, then a TonB-mediated signal facillitates opening of the interior side of pore, deforming the N-terminal plug and allowing passage of the ligand to the periplasm. Such a mechanism would prevent the free diffusion of small molecules thru the pore.
Pssm-ID: 238657 [Multi-domain] Cd Length: 635 Bit Score: 256.22 E-value: 4.19e-76
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1104735689 21 VSVVYGEDMRRaQPQVNLSEGLAGVPGLQIlNRQNYAQDLQLSIRGFGSRSTfgvrgiRIYVDGIPATMPDGQG--QTSN 98
Cdd:cd01347 2 VSVITAEDIEK-QPATSLADLLRRIPGVSV-TRGGGGGGSTISIRGFGPDRT------LVLVDGLPLASSNYGRgvDLNT 73
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1104735689 99 IDIGSIDHVDVLRGPFSALYGNSS-GGVINVVTKKGQQPDtlkAGSWYGSYGSWRNSLQASGS---TGDGTHAGDVDYTA 174
Cdd:cd01347 74 IPPELIERVEVLKGPSSALYGSGAiGGVVNIITKRPTDEF---GGSVTAGYGSDNSGSSGGGGfdvSGALADDGAFGARL 150
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1104735689 175 SVSRFTTHGYRDHSGASKNLANARLGV------RIDDDSTLTLLVNSTHIQADDPGGLTPGEWRANPEQVAPNVTLYNAR 248
Cdd:cd01347 151 YGAYRDGDGTIDGDGQADDSDEERYNVagkldwRPDDDTRLTLDAGYQDQDADGPGGTLPANGTGSSLGGGPSSNTNGDR 230
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1104735689 249 K---------------------TVDQTQAGLHYERSFGDNDDLSVMTYAGIRETTQYQSIPSTAQTKSQKfgvidltrhy 307
Cdd:cd01347 231 DwdyrdryrkraslglehdlndTGWTLRANLSYSYTDNDGDPLILNGGNNAAGGDLGRSGYSSERDTTQL---------- 300
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1104735689 308 qGIDTRWTHRDTLFSLPVSATVGLDYetmseqRKGYQNFTQTDLgqkgalrrdetnlmwnldpYFQTAWQLSDKWSLDAG 387
Cdd:cd01347 301 -GFDAGLNAPFGTGPVAHTLTLGVEY------RREELDEKQTAL-------------------YAQDTIELTDDLTLTLG 354
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1104735689 388 VRLSTISFDSDDHylANGDDSGDKRYHQWLPAASLKYAIDDSWNTYLSAGKGFETPTITELSNRPDGKSGLNLG---LKP 464
Cdd:cd01347 355 LRYDHYDQDSKDT--IAGGTTAKKSYSHWSPSLGLVYKLTDGLSLYASYSQGFRAPSLGELYGGGSHGGTAAVGnpnLKP 432
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1104735689 465 STNKTIEWGTKKRIGYGL-LNAAVFQTDTRNEIVSADNNEGRAT---YKNAGQTRRRGLELGFEQQFAGDWQLTTSWTLL 540
Cdd:cd01347 433 EKSKQYELGLKYDPGDGLtLSAALFRIDIKNEIVSTPTNTGLGLvtvYVNGGKARIRGVELEASYDLTDGLGLTGSYTYT 512
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1104735689 541 DARYRSnacagTGSDCTGNRIPGIARNMGYLGLEY-APYSGWYGGADIRY---MSNIEADDPNTVSAPSYTVSSLNTGYK 616
Cdd:cd01347 513 DTEVKR-----TDGATTGNRLPGIPKHTANLGLDYeLPDEGLTAGGGVRYrgkQYADTANGNNTVKVPGYTLVDLSASYQ 587
|
650 660 670 680 690
....*....|....*....|....*....|....*....|....*....|....
gi 1104735689 617 WlvdNWTVDLSGRIDNLFNRKYVGSVIVNESNGRYYEsAPGRNYGVGlnVSYAF 670
Cdd:cd01347 588 F---TKNLTLRLGVNNLFDKDYYTSLSVRGSGLYGYY-GPGRTYYLS--VSYKF 635
|
|
| FepA |
COG4771 |
Outer membrane receptor for ferrienterochelin and colicins [Inorganic ion transport and ... |
1-624 |
2.37e-74 |
|
Outer membrane receptor for ferrienterochelin and colicins [Inorganic ion transport and metabolism];
Pssm-ID: 443803 [Multi-domain] Cd Length: 612 Bit Score: 250.93 E-value: 2.37e-74
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1104735689 1 MIVSATPVSHglSELDTPAAVSVVYGEDMRRAqPQVNLSEGLAGVPGLQILNRQNYAQDLQLSIRGFGSRSTfgvrgiRI 80
Cdd:COG4771 30 VVVTATRTEQ--SLSDAPASVSVITAEEIEKL-GATDLADALRLLPGVSVTRSGGRGGSSGISIRGLGGDRV------LV 100
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1104735689 81 YVDGIP--ATMPDGQGQTSNIDIGSIDHVDVLRGPFSALYG-NSSGGVINVVTKKGQQPDTLKAGSWYGSYGSWRNSLQA 157
Cdd:COG4771 101 LIDGVPvnNPALGGGGDLSYIPPDDIERIEVIRGPASALYGsDAIGGVINIITKKPTDELEGSVSLGYGSNGNGTYSGSL 180
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1104735689 158 SGSTGDGthagDVDYTASVSRFTTHGYRDH--------SGASKNLANARLGVRIDDDSTLTLLVNSTHIQADDPGGLTPG 229
Cdd:COG4771 181 SLGGPGD----KLSFLLSGSYRDRDGYLDYrnggfvgnSGYERYNLNAKLGYRLSDNHRLSLSGGYSRQDRDGGPPTLGD 256
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1104735689 230 EWRANPEQVAPNVTlynarktVDQTQAGLHYERSFGDNDDLSVmTYAGIRETTQYQSIPSTAQTKSqkfgviDLTRHYQG 309
Cdd:COG4771 257 TEISSDNAGDRDTT-------TDRGNYSLRYNGDLGDNLDLSL-YYSRTDRDSTNGSLGGSTGSFS------DSDDTTYG 322
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1104735689 310 IDTRWTHRdtlFSLPVSATVGLDYEtmseqrkgYQNFTQTDLGQKGALRRDETNLmwnldpYFQTAWQLSDKWSLDAGVR 389
Cdd:COG4771 323 LELDLTYP---LGGNHTLTLGAEYR--------YDDLDSSSFLGGADASRDTYGL------FAQDEWKLTDKLTLTAGLR 385
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1104735689 390 LstisfdsdDHYlangDDSGDKRYHQWLPAASLKYAIDDSWNTYLSAGKGFETPTITELSNRPDGKSGL----NLGLKPS 465
Cdd:COG4771 386 Y--------DYY----STFGASNYTAFSPRLGLRYDLSDNLTLRASYGRGFRAPSLAELYGSGTGTPGRyvlgNPDLKPE 453
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1104735689 466 TNKTIEWGTKKRIGYG--LLNAAVFQTDTRNEIVSADNNEGRA---TYKNAGQTRRRGLELGFEQQFAGDWQLTTSWTLL 540
Cdd:COG4771 454 TSDNYELGLEYRLGNGglSLSLTGFYTDIKDLIVLVPVGPGPGdvlQYENVGKARTYGLELELKYRLGKGLTLTASYTYL 533
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1104735689 541 DARYRSNAcagtgsdcTGNRIPGIARNMGYLGLEYAPYSGWYGGADIRY---MSNIEADDPNTVSAPSYTVSSLNTGYKW 617
Cdd:COG4771 534 DSKIDDGD--------TGEPLPNVPPHKANLGLDYRLPKWWLLLLLTRYyggRYVTPPSGRLEGYTPGYTLLDLRASYKL 605
|
....*..
gi 1104735689 618 LvDNWTV 624
Cdd:COG4771 606 T-KNLTL 611
|
|
| FhuE |
COG4773 |
Outer membrane receptor for ferric coprogen and ferric-rhodotorulic acid [Inorganic ion ... |
11-670 |
3.61e-74 |
|
Outer membrane receptor for ferric coprogen and ferric-rhodotorulic acid [Inorganic ion transport and metabolism];
Pssm-ID: 443805 [Multi-domain] Cd Length: 692 Bit Score: 252.51 E-value: 3.61e-74
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1104735689 11 GLSELDTPAAVSVVYGEDMRRAQPQvNLSEGLAGVPGLQILNRQNYAQDlQLSIRGFgsrstfgvRGIRIYVDGipatMP 90
Cdd:COG4773 59 DTPLRETPQSVSVVTRQLIEDQGAT-TLDDALRNVPGVTVSSYDGGGRD-SFSIRGF--------SIDNYLRDG----LP 124
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1104735689 91 DGQGQTSNIDIGSIDHVDVLRGPFSALYGNSS-GGVINVVTKKGQQPDTLKAGSWYGSYGSWRNSLQASGSTGDgthAGD 169
Cdd:COG4773 125 LGGFGGGQPDTANLERVEVLKGPAGLLYGAGSpGGLVNLVTKRPTAEPQGEVSLSAGSWDTYRATADVGGPLNE---DGT 201
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1104735689 170 VDYTASVSRFTTHGYRDHSGASKNLANARLGVRIDDDSTLTLLVNSTHIQADDPGGLTPgeWRANPEQVAPNVTLY--NA 247
Cdd:COG4773 202 LRYRLNAAYEDGDSFRDGVDNRRTLIAPSLDWDLTDDTTLTLGAEYQDDDSTGDRGFLP--LDGTLLDLPRSTNLGepWD 279
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1104735689 248 RKTVDQTQAGLHYERSFgdNDDLSVMTYAGIRETTQ-------YQSIPSTAQTKSQKFGVIDLTRHYQGIDTRWTHRDTL 320
Cdd:COG4773 280 YYDTETTTLFAELEHRF--NDDWSLRANARYSDSDRdgrsayaYGAPDAATGTLTRYASARDGDSRSDSLDANLNGKFET 357
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1104735689 321 FSLPVSATVGLDYETMSEQRKGYQ----NFTQTDLGQ-----KGALRRDETNLMWNLdpYFQTAWQLSDKWSLDAGVRLS 391
Cdd:COG4773 358 GGLEHTLLVGADYSRYDSDSDSATagtiNIYNPVYGNlpepdFDASDTDTTTRQTGL--YAQDQISLTDRLSLLLGGRYD 435
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1104735689 392 TISFDSDDHylaNGDDSGDKRYHQWLPAASLKYAIDDSWNTYLSAGKGFETPTITELSNRPdgksglnlgLKPSTNKTIE 471
Cdd:COG4773 436 WYETDSTNR---LGGSTTSYDDSAFTPRAGLVYDLTPGLSLYASYSESFEPQSGADNNGNP---------LDPETGKQYE 503
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1104735689 472 WGTKKRIGYG--LLNAAVFQTDTRNEIVSADNNEGraTYKNAGQTRRRGLELGFEQQFAGDWQLTTSWTLLDARYRSNAc 549
Cdd:COG4773 504 AGVKGELFDGrlNATLAVFDITQKNVATTDPDNPN--FYVQVGEVRSRGVELELSGELTPGLNLIAGYTYTDAKITKDA- 580
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1104735689 550 agtgSDCTGNRIPGIARNMGYLGLEYA----PYSGWYGGADIRYMSNIEADDPNTVSAPSYTVSSLNTGYKWLvDNWTVD 625
Cdd:COG4773 581 ----DALEGKRLTNVPRHTASLWTTYRfpsgALKGLGLGGGVRYVGERYGDAANTFTLPSYTLVDAGARYDLG-KNWTLQ 655
|
650 660 670 680
....*....|....*....|....*....|....*....|....*
gi 1104735689 626 LSgrIDNLFNRKYVGSVivnESNGRYYESAPgRNygVGLNVSYAF 670
Cdd:COG4773 656 LN--VNNLFDKKYYASS---GSRGYVYYGAP-RN--VRLSLSYKF 692
|
|
| TonB-siderophor |
TIGR01783 |
TonB-dependent siderophore receptor; This subfamily model encompasses a wide variety of ... |
16-670 |
1.48e-54 |
|
TonB-dependent siderophore receptor; This subfamily model encompasses a wide variety of TonB-dependent outer membrane siderophore receptors. It has no overlap with TonB receptors known to transport other substances, but is likely incomplete due to lack of characterizations. It is likely that genuine siderophore receptors will be identified which score below the noise cutoff to this model at which point the model should be updated. [Transport and binding proteins, Cations and iron carrying compounds, Transport and binding proteins, Porins]
Pssm-ID: 273805 [Multi-domain] Cd Length: 651 Bit Score: 197.64 E-value: 1.48e-54
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1104735689 16 DTPAAVSVVYGEDMRRAQPQVnLSEGLAGVPGLQILNRQNYAQDLQLSIRGFGSRSTFGVrgirIYVDGIPATmpdGQGQ 95
Cdd:TIGR01783 1 DIPQSVSVITRQELEDQQAGS-LSEALQRVPGVVVGGSGGTTQFGNITIRGFGLEVDIDN----VYLDGVPLL---SRGN 72
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1104735689 96 TSNIDIGSIDHVDVLRGPFSALYGNSS-GGVINVVTKKGQQ----PDTLKAGSWYGSYGSWRNSLQASGStgdgthaGDV 170
Cdd:TIGR01783 73 LAIVDPAMVERVEVLRGPASLLYGGSApGGVINIVTKRPQDepkgSVTFGAGTRSGYRTAFDLGGPLGAD-------GTF 145
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1104735689 171 DYTASVSRFTTHGYRDHSGASKNLANARLGVRIDDDSTLTLLVNSTHIQADDPGGLTPGEWRANPEQVAPNVTLYNARKT 250
Cdd:TIGR01783 146 RGRLNGARQDGDSFYDGAGEETRLGATATDWQLDDRTLLRLGAYYQKERDRGGYGGLPASGGTSGRDLSSDRYLGTSSNR 225
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1104735689 251 V----DQTQAGLHYERSFGDN-------------DDLSVMTYAGIRETTQYQSIPSTAQTKSQKFGVIDLTrhYQGIDTR 313
Cdd:TIGR01783 226 NyddrEYLSYGLSLEYQFNDVwtgkqnlrysyfdTDSNQVQASGYSSDGGLFGRSLTVVNVKQDRVQIDAG--LDGEFET 303
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1104735689 314 WTHRDTLFSLPVSATVG------LDYETMSEQRKGYQNFTQTDLGQKGALRRDeTNLMWNLDPYFQTAWQLSDKWSLDAG 387
Cdd:TIGR01783 304 GPIEHDLLLGVSYGQRTtnrfnnTGYPSDNIYSLTATSSARTDIGDSPKDRAL-SSTTKALNGVALQRILLADKWTLTLG 382
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1104735689 388 VRLSTISFDSDDHylaNGDDSGDKRYHQWLPAASLKYAIDDSWNTYLSAGKGFETPTITELSNRPDGKsglnlGLKPSTN 467
Cdd:TIGR01783 383 GRYDSVDVKSNNG---VAGSTGKRDDSQFTPSLGVAYKPTDDWSLYASYAESFKPGGYYPKGAGNSGD-----ILEPEKG 454
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1104735689 468 KTIEWGTKKRIGYGLL-NAAVFQTDTRNEIVSADNNEgrATYKNAGQTRRRGLELGFEQQFAGDWQLTTSWTLLDARYRS 546
Cdd:TIGR01783 455 KNYELGVRYDLGDSLLaTAALFRITKDNQLVQDPVNG--TFSVNAGKTRNRGVELEARGYLTPGLSLSAGYTYTDAEFTE 532
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1104735689 547 nacaGTGSDCTGNRIPGIARNMGYLGLEYAPYSGWYG---GADIRYMSNIEADDPNTVSAPSYTVSSLNTGYKW-LVDNW 622
Cdd:TIGR01783 533 ----DTNGDTQGNTVPFVPKHTASLWASYAPPVGDNGltlGGGVQYTGKAYVDGGNTGKVPSYTVVDLSVRYDLtKKKNL 608
|
650 660 670 680
....*....|....*....|....*....|....*....|....*....
gi 1104735689 623 TVDLSgrIDNLFNRKYVGSVIVNESN-GRYYEsaPGRNygVGLNVSYAF 670
Cdd:TIGR01783 609 TLALN--VNNLFDRDYYTSGYRWGPSaYIYPG--APRT--VGLSVSYDF 651
|
|
| TonB_dep_Rec |
pfam00593 |
TonB dependent receptor; This model now only covers the conserved part of the barrel structure. |
200-667 |
3.98e-47 |
|
TonB dependent receptor; This model now only covers the conserved part of the barrel structure.
Pssm-ID: 395474 [Multi-domain] Cd Length: 475 Bit Score: 173.42 E-value: 3.98e-47
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1104735689 200 GVRIDDDSTLTLLVNSTHIQADDPGGLTPGEWRANPEQVAPNVTLY-NARKTVDQTQAGLHYERSFGDNDDLSVmtyaGI 278
Cdd:pfam00593 6 LDLLGDDTLLTLGYDYSRYTDGLDLGLTLDGYGNDGGYLGDRPLYYgRDYSDTDRKRLSLGYDYDLGDGLSWLS----TL 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1104735689 279 RETTQYQSIPSTAQTKSQKFGVIDLTRHYQGIDTRWTHRDTL---FSLPVSATVGLDYETMSEQRKGYQNFTQTDLGQKG 355
Cdd:pfam00593 82 RLGLRYSSLDGDYTSNSSGLSGAGDYLSDDRLYGLYGLDGDLelsLDLSHDLLLGVELRTAGLDYRRLDDDAYDPYDPAN 161
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1104735689 356 ALRRDETNL-MWNLDPYFQTAWQLSDKWSLDAGVRLSTISFDSDDHYlaNGDDSGDKRYHQWLPAASLKYAIDDSWNTYL 434
Cdd:pfam00593 162 PSSSSYSDTtTDSYGLYLQDNIKLTDRLTLTLGLRYDHYSTDGDDGN--GGGDNFSRSYSAFSPRLGLVYKPTDNLSLYA 239
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1104735689 435 SAGKGFETPTITELSNRPDGKSGL-----NLGLKPSTNKTIEWGTKKRIGYGLLNAAVFQTDTRNEIVSADNNEGRA--- 506
Cdd:pfam00593 240 SYSRGFRAPSLGELYGSGSGGGGGavaggNPDLKPETSDNYELGLKYDDGRLSLSLALFYIDIKNLITSDPDGPGLGgtv 319
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1104735689 507 -TYKNAGQTRRRGLELGFEQQFAGDWQLTTSWTLLDARYRSNAcagtgsDCTGNRIPGIARNMGYLGLEYAPYSG-WYGG 584
Cdd:pfam00593 320 yTYTNVGKARIRGVELELSGRLWGLGLSGGGYTYTDADDDADA------DDTGNPLPNVPRHTANLGLTYDFPLGgWGAR 393
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1104735689 585 ADIRYM---SNIEADDPNTVSAPSYTVSSLNTGYKwLVDNWTvdLSGRIDNLFNRKYVGSVIVNESNGRYYeSAPGRNYG 661
Cdd:pfam00593 394 LGARYVgsgERRYGDAANTFKTPGYTLVDLSAGYR-LNKNLT--LRLGVNNLFDKYYKRYYSSGGGNLGGY-PGPGRTFY 469
|
....*.
gi 1104735689 662 VGLNVS 667
Cdd:pfam00593 470 LGLSYK 475
|
|
| TonB-hemlactrns |
TIGR01786 |
TonB-dependent hemoglobin/transferrin/lactoferrin receptor family protein; This model ... |
1-668 |
9.55e-44 |
|
TonB-dependent hemoglobin/transferrin/lactoferrin receptor family protein; This model represents a family of TonB-dependent outer membrane receptor/transporters acting on iron-containing proteins such as hemoglobin, transferrin and lactoferrin. Two subfamily models with a narrower scope are contained within this model, the heme/hemoglobin receptor family protein model (TIGR01785) and the transferrin/lactoferrin receptor family model (TIGR01776). Accessions which score above trusted to this model while not scoring above trusted to the more specific models are most likely to be hemoglobin transporters. Nearly all of the species containing trusted hits to this model have access to hemoglobin, transferrin or lactoferrin or related proteins in their biological niche. [Transport and binding proteins, Cations and iron carrying compounds, Transport and binding proteins, Porins]
Pssm-ID: 273808 [Multi-domain] Cd Length: 715 Bit Score: 167.59 E-value: 9.55e-44
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1104735689 1 MIVSATPVS--HGLSELDTPAAVSVVYGEDMRRAQPQvNLSEGLAGVPGLQIlnrqnyaqdlqlSIRGFGSRSTFGVRG- 77
Cdd:TIGR01786 3 ITVTATRTAdpQRRDLSVTPASVSVISREQLKSQQVR-NLRDLLRYEPGVSV------------VEGGRGGSQGINIRGl 69
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1104735689 78 ----IRIYVDGIP-ATMPDGQGQTS----NIDIGSIDHVDVLRGPFSALYGNSS-GGVINVVTKKGQqpDTLKAG-SWYG 146
Cdd:TIGR01786 70 dknrVAVLVDGIRqNTSYGGQGSTFyainSIDPELIKSIEIVKGASSSLYGSGAlGGVVAFRTKDAA--DLLKPGkDLGG 147
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1104735689 147 ----SYGSWRNSLQASGSTGDGTHAGDVDYTASVSRFttHGYRDHSGASKNLAN----------------ARLGVRIDDD 206
Cdd:TIGR01786 148 lsklGYSSANNRFTQSVAAAGRNDDVDALVQATYRRG--HELKNGNKANIGNESkrskpnpsdyksqsflAKLGWQLNDA 225
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1104735689 207 STLTLLVNSTHIQADDPGGLTPGEWRANPEQVAPNVTLYNARKTVDQTQAGLHYE-----------RSFGDNDDLSVMTY 275
Cdd:TIGR01786 226 HRLGLSLEYTQTDYDEPEMTNTSYLTKPLGAPLLSSTVVLGDSKTRDRRTGLDYElnpdnswldtvKLALDKQYIQLYNY 305
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1104735689 276 AGIRETTQYqsiPSTAQTKSQKFGVIDLTRHYQGIDTRWTHRDTLfslpvSATVGLDY----ETMSEQRKGYQNFTQTDL 351
Cdd:TIGR01786 306 LNATSASDY---PGVDKNGRYKDKYDYYTLGFDTNNKIEFSVHSL-----SLTYGLDRfkdkVSTGDSRRNLPTAAYNLY 377
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1104735689 352 GQKGALRRDETNlmwNLDPYFQTAWQLSDKWSLDAGVRLSTISFDSDDHYLANGDDSgDKRYHQWLPAASLKYAIDDSWN 431
Cdd:TIGR01786 378 GYEGENRPVKGS---NFGLFLQDNIKLGDWLSLSAGLRYDHYKTDPKADESKDYGAI-SKTYSRWSPSLGLTYKPTPWLT 453
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1104735689 432 TYLSAGKGFETPTITELSNRPDGKSGL------NLGLKPSTNKTIEWGTKKRIGYGLLNAAVFQTDTRNEI-------VS 498
Cdd:TIGR01786 454 LYYSYSQGFRAPSFDELYGTGAHPGGGpytflpNPNLKPETSKNWEIGINLHFDQLDFKVSYFRNDYKDFIdlgigvtAK 533
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1104735689 499 ADNNEGRA----TYKNAGQTRRRGLELgfeqqfAGDWQLTTSWTLLDARYRSNACAGT-GSDCTGNR-IPGIARNMGYLG 572
Cdd:TIGR01786 534 GNMAQVGSntitNYVNIDNARIRGIEL------SGRYDLGSFFSGPDGWTTTLKYGYTkGKDSDTNPwLNAITPLKVVLG 607
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1104735689 573 LEY-APYSGWYGGADIRYMS-------------NIEADDPNTVSAPSYTVSSLNTGYKWlVDNWTVDLSgrIDNLFNRKY 638
Cdd:TIGR01786 608 LGYdHPDEKWGVGLTLTFSGakdavdayatyyeNGEAAKAGPLRTPSYTVVDLYGYYKP-NKNLTLRFG--VYNLLDRKY 684
|
730 740 750
....*....|....*....|....*....|.
gi 1104735689 639 VGSVIVNESNGR-YYESAPGRNYGVGLNVSY 668
Cdd:TIGR01786 685 TTWESARQAGPLaTGYTAPGRNYKASVEYKF 715
|
|
| TonB-hemin |
TIGR01785 |
TonB-dependent heme/hemoglobin receptor family protein; This model represents the ... |
1-668 |
6.36e-36 |
|
TonB-dependent heme/hemoglobin receptor family protein; This model represents the TonB-dependent outer membrane heme/hemoglobin receptor/transporter found in bacteria which live in contact with animals (which contain hemoglobin or other heme-bearing globins) or legumes (which contain leghemoglobin). Some species having hits to this model such as Nostoc, Caulobacter and Chlorobium do not have an obvious source of hemoglobin-like proteins in their biological niche and so the possibility exists that they act on some other substance. [Transport and binding proteins, Cations and iron carrying compounds, Transport and binding proteins, Porins]
Pssm-ID: 273807 [Multi-domain] Cd Length: 665 Bit Score: 144.07 E-value: 6.36e-36
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1104735689 1 MIVSATPVSHGLSelDTPAAVSVVYGEDMRRAQPQvNLSEGLAGVPGLQILNRQNyAQDLQLSIRGF-GSRstfgvrgIR 79
Cdd:TIGR01785 4 VTVTATRTRQVLS--EAPASVSVISGEQIESKQAN-NLADALNTVPGVDVTGGGR-PPGQSINIRGLqDNR-------VL 72
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1104735689 80 IYVDGIPATMPDGQGQ--TSNIDIGSIDHVDVLRGPFSALYGNSS-GGVINVVTKKGQ---QPDTLKAGSWYGSYGSWRN 153
Cdd:TIGR01785 73 VVVDGARQNYQRGGAHngSLFVDPELLKRIEIVKGPSSSLYGSGAlGGVVAFRTKDAAdllRPGQLFGGLAKLSYGSNNN 152
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1104735689 154 SLQASGStGDGTHAGDVDYTASVSRFTTHGYRDHSGAS-KNLAN------ARLGVRIDDDSTLTLLVNSTHIQADDPGGL 226
Cdd:TIGR01785 153 SFGGSVA-VAGRLDDNLDALVAATYRDGGNYRNGNKEEaTNSAYvqknllAKLGWQLDDAQRLEFSYFTTEGSLDEAQNS 231
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1104735689 227 TP------GEWRANPEQVAPNVTL---YNA---RKTVDQTQAGLHYERSfgDNDDLSVMTYAGIRETTQYQSIPSTAQTK 294
Cdd:TIGR01785 232 GPgteyvlGSSSTLLASSTRDRSAtltYNWtpeDNPWLDATASLYYNRT--ENDNDRSARGVGREEGYQYTTYGATLQNT 309
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1104735689 295 SQkFGVIDLTRHYQGIDTRWTHRDTLFSlpvsatvgldyeTMSEQRKGYQNFTQTDLGQKGALRRDETNLmwnldpyfqt 374
Cdd:TIGR01785 310 SR-FDVASWSTLTYGVDWMKDKRRTESF------------DPNSVTTIVPNPPSAKEYFFGLFLQDNIPL---------- 366
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1104735689 375 awqLSDKWSLDAGVRLSTISFDSDDhylANGDDSGDKRYHQWLPAASLKYAIDDSWNTYLSAGKGFETPTITEL--SNRP 452
Cdd:TIGR01785 367 ---LDDRLTLSAGLRYDHYKLSPKT---TADTEAVDRSYSRWSPSLGLSYKPVDWLTLYASYSQGFRAPSIDELygTGDH 440
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1104735689 453 DGKSGL-----NLGLKPSTNKTIEWGTKKRIGYGLLN-------AAVFQTDTRNEIVSADNNEGRAT--------YKNAG 512
Cdd:TIGR01785 441 PGTPGGytfapNPNLKPETSKTWELGANLSFDNLLLDndqlqfkVAYFYNDVKDFIDLTIGVTDNVTagmnnitqYVNID 520
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1104735689 513 QTRRRGLELgfeqqfAGDWQLTTSWTLLDARYRSnacagtGSDCTGNR-IPGIARNMGYLGLEYA-PYSGWYGGADIRY- 589
Cdd:TIGR01785 521 GARIRGIEA------SASYDAGLWATGLSYGYTI------GKDQNTNQwLSNIPPLKLVVTVGYRfPDRRLDLGAKAAYy 588
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1104735689 590 MSNIEADDPNTVSA------PSYTVSSLNTGYKWL-VDNWTVDLSgrIDNLFNRKYVgsvivnESNGrYYESAPGRNYGV 662
Cdd:TIGR01785 589 ERQSESPTTEDVAAngllttPGYTVVDLYATYQPNaVKGLTVRFG--VNNLTDRKYT------PAQS-VPGAGPGRNFKG 659
|
....*.
gi 1104735689 663 GLNVSY 668
Cdd:TIGR01785 660 SVKYQF 665
|
|
| BtuB |
COG4206 |
Outer membrane cobalamin receptor protein BtuB [Coenzyme transport and metabolism]; |
1-284 |
1.39e-33 |
|
Outer membrane cobalamin receptor protein BtuB [Coenzyme transport and metabolism];
Pssm-ID: 443355 [Multi-domain] Cd Length: 276 Bit Score: 129.99 E-value: 1.39e-33
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1104735689 1 MIVSATPVShgLSELDTPAAVSVVYGEDMRRAQPQvNLSEGLAGVPGLQILNRQNYAQDLQLSIRGFGSRSTfgvrgiRI 80
Cdd:COG4206 1 VVVTATRLE--QSKSDLTGSVTVIDAEELERSGAT-SLADALRRVPGVQVSSSGGPGSAASISIRGLGSNQT------LV 71
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1104735689 81 YVDGIPATMP-DGQGQTSNIDIGSIDHVDVLRGPFSALYG-NSSGGVINVVTKKGQQPDTLKAGSWYGSYGSWRNSLQAS 158
Cdd:COG4206 72 LIDGVPLNDPsLGGVDLSLIPPDDIERIEVLKGAASALYGsDAIGGVINITTKKGKKGFKGSVSASYGSFGTRRLSASLS 151
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1104735689 159 GStgdgthAGDVDYTASVSRFTTHGYR-------DHSGASKNLANARLGVRIDDDSTLTLLVNSTHIQADDPGGLTPGEW 231
Cdd:COG4206 152 GG------AGKFSYSLSASYRRSDGYRyndpdlrNNDGYENTSLNARLGYKLGDNGSLSLSGGYSDSERGYPGAVGSDRN 225
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|...
gi 1104735689 232 RANpeQVAPNVTLYNARKTVDQTQAGLHYERSFGDNDDLSVMTYAGIRETTQY 284
Cdd:COG4206 226 LRL--SLSLEYKLSDGWSLLLLAYYYYDRDYEDGGGDSAGTSNTDGARAGLSY 276
|
|
| TonB-B12 |
TIGR01779 |
TonB-dependent vitamin B12 receptor; This model represents the TonB-dependent outer membrane ... |
17-670 |
6.08e-30 |
|
TonB-dependent vitamin B12 receptor; This model represents the TonB-dependent outer membrane receptor found in gamma proteobacteria responsible for translocating the cobalt-containing vitamin B12 (cobalamin). [Transport and binding proteins, Other, Transport and binding proteins, Porins]
Pssm-ID: 273802 [Multi-domain] Cd Length: 614 Bit Score: 125.36 E-value: 6.08e-30
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1104735689 17 TPAAVSVVYGEDMRRAQPQvNLSEGLAGVPGLQILNRQNYAQDLQLSIRGFGSRStfgvrgIRIYVDGIP-ATMPDGQGQ 95
Cdd:TIGR01779 45 TLAPVTIITRQDIERTQAK-SLPELLRRLPGVSIAQNGGRGQNTSLFLRGTESDH------VLVLIDGIRfGSAAAGAAD 117
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1104735689 96 TSNIDIGSIDHVDVLRGPFSALYGNSS-GGVINVVTKK--GQQPDTLKAGswYGSYGSWRNSL---QASGSTGDGTHAGD 169
Cdd:TIGR01779 118 FQQLPVELVERIEYVRGPRSSLYGSEAiGGVINIITRRrsGGQGTTLSAG--LGSLDYQEYSIasgVAIGENGWYSVALG 195
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1104735689 170 VDYTA--SVSRFTTHGYR-DHSGASKNLANARLGVRIDD--DSTLTLLVNSTHIQADDPggltpgewranpeqvAPNVTL 244
Cdd:TIGR01779 196 TESTKgiNVRPGGPGVYDpDRDGFRSDSLLLGGGHRFDEswSLFVNALRYENRNDYDNY---------------SFGTRL 260
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1104735689 245 YNARKTVDQT-QAGLHYersFGDNDDLSVMTYAGIRETTQYqsipstAQTKSQKFGVIDLTRHYQGidtRWTHRDTLFSL 323
Cdd:TIGR01779 261 YKEAEKGDQSfTGGRQR---QSERDVSELTLSTGKSKDWDY------AYSKGRYSSTSDTREQRNI---QWQNDLLVGDG 328
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1104735689 324 PVsATVGLDYETMSEQRK-GYQNFTQTDLGQkgalrrdetnlmwnldpYFQTAWQLSDkWSLDAGVRlstisfdSDDHYL 402
Cdd:TIGR01779 329 WV-LAGGVDWQKDSIISStADKEDDRSNTAA-----------------FAQVLQQWGQ-QLLEASLR-------RDDNQQ 382
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1104735689 403 ANGDDSGDkryhqwlpaASLKYAIDDSWNTYLSAGKGFETPTITELSNRPDGksglNLGLKPSTNKTIEWGTKKRIGYGL 482
Cdd:TIGR01779 383 FGSHTTGS---------IAWGYQFIEELRFTASYGTAFKAPNLNQLYYPSYG----NPNLQPETSKSAELGFYGLFSGGK 449
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1104735689 483 LNAAVFQTDTRNEIVSADNNEGRatYKNAGQTRRRGLELGFEQQFAGdWQLTTSWTLLDARyRSNacagtgsdcTGNRIP 562
Cdd:TIGR01779 450 WSISGYRTKINDLIDYDSHPKGY--PNNIGEARIKGVEATAEFATGG-WTHQLSVDLLDAQ-NVN---------TGNTLP 516
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1104735689 563 GIARNMGYLGLEYAPYS-GW---YGGADIRYMSNIEADDPNTVSAPSYTVSSLNTGYKwLVDNWTVdlSGRIDNLFNRKY 638
Cdd:TIGR01779 517 RRARQMYKWNADRAFEQfDWgasYQYVGKRYDDDYNTYPTQNVRLGGYSLLDLRVSYY-VTDSWTV--QGRIANLFDKDY 593
|
650 660 670
....*....|....*....|....*....|..
gi 1104735689 639 VGSvivnesngrYYESAPGRNYgvGLNVSYAF 670
Cdd:TIGR01779 594 ETA---------YGYPQAGRAY--YLSIRYQF 614
|
|
| Plug |
pfam07715 |
TonB-dependent Receptor Plug Domain; The Plug domain has been shown to be an independently ... |
16-125 |
4.24e-22 |
|
TonB-dependent Receptor Plug Domain; The Plug domain has been shown to be an independently folding subunit of the TonB-dependent receptors. It acts as the channel gate, blocking the pore until the channel is bound by ligand. At this point it under goes conformational changes opens the channel.
Pssm-ID: 462243 [Multi-domain] Cd Length: 107 Bit Score: 91.56 E-value: 4.24e-22
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1104735689 16 DTPAAVSVVYGEDMRRaQPQVNLSEGLAGVPGLQILNRQNYAQDlQLSIRGFGSRSTfgvrgiRIYVDGIPATMP-DGQG 94
Cdd:pfam07715 4 DTPGSVSVVTAEDIED-QGATNLADALRGVPGVSVSSGGGGGGS-SISIRGFGSNRV------LVLVDGVPLNSGgGGSV 75
|
90 100 110
....*....|....*....|....*....|..
gi 1104735689 95 QTSNIDIGSIDHVDVLRGPFSALYG-NSSGGV 125
Cdd:pfam07715 76 DLNSIDPEDIERVEVLKGPASALYGsGAIGGV 107
|
|
| PRK10044 |
PRK10044 |
ferrichrome outer membrane transporter; Provisional |
17-641 |
2.50e-21 |
|
ferrichrome outer membrane transporter; Provisional
Pssm-ID: 236643 [Multi-domain] Cd Length: 727 Bit Score: 99.06 E-value: 2.50e-21
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1104735689 17 TPAAVSVVYGEDMRRAQPQvNLSEGLAGVPGLQILNRQNYAQDLQLSIRGFGSRSTfgvrGIRIYVDGIPAtmpdgQGQT 96
Cdd:PRK10044 79 TPQSISVVTAEEMALHQPK-SVKEALSYTPGVSVGTRGASNTYDHLIIRGFAASGQ----SQNNYLDGLKL-----QGNF 148
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1104735689 97 SN---IDIGSIDHVDVLRGPFSALYGNSS-GGVINVVTKKgQQPDTLKAGSW-YGSYGSWRNSLQASGSTGDgthAGDVD 171
Cdd:PRK10044 149 YNdavIDPYMLERAELMRGPVSVLYGKSNpGGLLNMVSKR-PTTEPLKEVQFkMGTDNLFQTGFDFSDALDD---DGVYS 224
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1104735689 172 YtasvsRFTTHGyRDHSGASKNLANARLGV------RIDDDSTLTLLvnsTHIQaDDPG----GLTPGEWRANPeqvapn 241
Cdd:PRK10044 225 Y-----RLTGLA-RSANAQQKGSEEQRYAIapsftwRPDDKTNFTFL---SYFQ-NEPEtgyyGWLPKEGTVEP------ 288
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1104735689 242 vtLYNARK--------------TVDQTQAGLHYERSFGDN--------------------------DDLSVMTYAGIRET 281
Cdd:PRK10044 289 --LPNGKRlptdfnegaknntySRNEKMVGYSFDHEFNDTftvrqnlryaenktsqrsvygygvcsDKGHYLNRGYVVDD 366
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1104735689 282 TQYQSIPSTAQTKSqKF--GVIDLTRhYQGIDTRWTHRD------TLFSLPVSATVGLDYETMseqrkgyqNFTQTDLGQ 353
Cdd:PRK10044 367 EKLQNFSVDTQLQS-KFatGDVDHTL-LTGVDFMRMRNDinawfgYADSVPLLNLYGPVNTDF--------DFNANSGPY 436
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1104735689 354 KGALRRDETNLmwnldpYFQTAWQLsDKWSLDAGVR---LSTISFDSDDHYLANGDDsgdkryHQWLPAASLKYAIDDSW 430
Cdd:PRK10044 437 QILNKQKQTGL------YVQDQAEW-DKWLVTLGGRydwADQSSLNRVNGTTDKRDD------KQFTWRGGVNYLFDNGI 503
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1104735689 431 NTYLSAGKGFETPTITELSNRPdgksglnlgLKPSTNKTIEWGTK-----KRIgygLLNAAVFQ-TDTRNeiVSADNNEG 504
Cdd:PRK10044 504 TPYFSYSESFEPSSGTGKDGNI---------FAPSKGKQYEAGVKyvpkdRPI---VVTGAVYQlTKTNN--LTADPENS 569
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1104735689 505 RATYKNaGQTRRRGLELGFEQQFAGDWQLTTSWTLLDARYRsnacagTGSDCTGNRIPGIARNMGYLGLEY----APYSG 580
Cdd:PRK10044 570 FFSVQG-GEIRARGVELEAKAALSANVNVTGSYTYTDAEYT------TDTTYKGNTPAQVPKHMASLWADYtffdGPLSG 642
|
650 660 670 680 690 700
....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1104735689 581 WYGGADIRYMSNIEADDPNTVSAPSYTVSSLNTGYkwlvDNWTVDLSG-----RIDNLFNRKYVGS 641
Cdd:PRK10044 643 LTLGTGGRYTGSSYGDPANSFKVGSYTVVDALVKY----DLARFGMAGssvalNVNNLFDREYVAS 704
|
|
| PRK10064 |
PRK10064 |
catecholate siderophore receptor CirA; Provisional |
1-547 |
3.41e-20 |
|
catecholate siderophore receptor CirA; Provisional
Pssm-ID: 236646 [Multi-domain] Cd Length: 663 Bit Score: 94.95 E-value: 3.41e-20
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1104735689 1 MIVSATPVSHGLSelDTPAAVSVVYGEDMRRaQPQVNLSEGLAGVPGLQILNRQNYAQDLqlSIRGFGSRSTFG-VRGIR 79
Cdd:PRK10064 33 MVVTASAVEQNLK--DAPASISVITQEDLQR-KPVQNLKDVLKEVPGVQLTNEGDNRKGV--SIRGLDSSYTLIlIDGKR 107
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1104735689 80 iyVDGIPATMPDGQGQTSNIDIGSIDHVDVLRGPFSALYGNSS-GGVINVVTKK-GQQpdtlkagswygsygsWRNSLQA 157
Cdd:PRK10064 108 --VNSRNAVFRHNDFDLNWIPVDAIERIEVVRGPMSSLYGSDAlGGVVNIITKKiGQK---------------WHGTVTV 170
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1104735689 158 SGSTGDGTHAGDvdyTASVSRFTTHGYRDHSGASKnlANARLGVRIDDDStltllVNSTHIQADDPGGLTPGEWRANPEQ 237
Cdd:PRK10064 171 DTTIQEHRDRGD---TYNGQFFTSGPLIDGVLGMK--AYGSLAKREKDDP-----QNSTTTDTGETPRIEGFTSRDGNVE 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1104735689 238 VApnvtlYNARKTVDQTqAGLHYERSFGDNDDLSVMTYAGIRETTQYQSIPSTAQTKSQKFG-VID---------LTRHY 307
Cdd:PRK10064 241 FA-----WTPNQNHDFT-AGYGFDRQDRDSDSLDKNRLERQNYSLSHNGRWDYGNSELKYYGeKVEnknpgnsspITSES 314
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1104735689 308 QGIDTRWThrdtlfsLPVSA---TVGLDYETMSEQRKGYQNFT-----QTDLGQKGALRRDEtnlmwnldpyfqtaWQLS 379
Cdd:PRK10064 315 NSIDGKYT-------LPLTAinqFLTFGGEWRHDKLSDAVNLTggtssKTSASQYALFVEDE--------------WRIF 373
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1104735689 380 DKWSLDAGVRLstisfdsDDHylangDDSGDkryhQWLPAASLKYAIDDSWNTYLSAGKGFETPTITELSnrPDGKSGLN 459
Cdd:PRK10064 374 EPLALTTGVRM-------DDH-----ETYGD----HWSPRAYLVYNATDTVTVKGGWATAFKAPSLLQLS--PDWTSNSC 435
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1104735689 460 LG---------LKPSTNKTIEWGTKKRIGYGLLNAA-----VFQTDTRNEI-------------------VSADNNEGRA 506
Cdd:PRK10064 436 RGackivgspdLKPETSESWELGLYYMGEEGWLEGVessvtVFRNDVDDRIsisrtsdvnaapgyqnfvgFETNGRGRRV 515
|
570 580 590 600
....*....|....*....|....*....|....*....|....
gi 1104735689 507 ---TYKNAGQTRRRGLELGFEQQFAGDWQLTTSWTLLDARYRSN 547
Cdd:PRK10064 516 pvfRYYNVNKARIQGVETELKIPFNDEWKLSLNYTYNDGRDVSN 559
|
|
| PRK13483 |
PRK13483 |
ligand-gated channel protein; |
1-668 |
4.41e-19 |
|
ligand-gated channel protein;
Pssm-ID: 184080 [Multi-domain] Cd Length: 660 Bit Score: 91.76 E-value: 4.41e-19
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1104735689 1 MIVSATPVSHGLSelDTPAAVSVVYGEDMRRAQPQvNLSEGLAGVPGLQIL---NRQNyaqdlqLSIRGFGSRSTFgvrg 77
Cdd:PRK13483 36 VVVTASGYEQQIR--DAPASISVITREDLENRFYR-DLTDALLDVPGVVVTgggDRTD------ISLRGMGSQYTL---- 102
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1104735689 78 irIYVDG----IPATMPDGQG----QTSNIDIGSIDHVDVLRGPFSALYGNSS-GGVINVVTKKGQQpdtlkagSWYGSY 148
Cdd:PRK13483 103 --ILVDGkrqsSRETRPNSDGpgveQAWTPPLAAIERIEVIRGPMSSLYGSDAiGGVINIITRKVPN-------EWQGEV 173
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1104735689 149 gSWRNSLQASGSTGD---------GTHAGDV-------DYTASVSRFTTHGYRDHSGASknlANARLGVRIDDDSTLTLL 212
Cdd:PRK13483 174 -RLDTTLQENSDSGNvyqanffvnGPLIKDLlglqlygQYTQREEDDIEGGYRDKDARS---LTAKLALTPNEDHDIMLE 249
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1104735689 213 VNSTHIQADDpgglTPGewranpeqvapnvtlynarKTVDQTQAGLHYERSFGDNDdlsvmtyagirETTQY-QSIPSTA 291
Cdd:PRK13483 250 VGTSNQERDS----TVG-------------------KTVAPLAPGESCGRRGCPES-----------STTEYeRSTVSLS 295
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1104735689 292 QTKSQKFGVIDLTRHYQGIDTR---WTHRDTLFSLPVSATVGldYETMSEQRKGYQNFTQTDL-GQKGALRRDETNLMWN 367
Cdd:PRK13483 296 HTGRWDFGTSDTYIQHEEFDNKsreMKIKNTDFQSSLVAPLG--QEHTLTFGAAYNHQDLTDEtSNQISDLTDISRTQWA 373
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1104735689 368 LdpYFQTAWQLSDKWSLDAGVRLstisfDSDDHYlanGDDSGDKRYHQWLPAaslkyaidDSWNTYLSAGKGFETPTITE 447
Cdd:PRK13483 374 V--FSEDEWRIADDFALTGGLRL-----DHDENF---GGHVSPRVYGVWNLA--------PSWTVKGGVSTGFRAPSLRQ 435
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1104735689 448 LSnrPD-------GKSGLNLGLKPSTNKTIEWGTKKRIGYGL-LNAAVFQTDTRNEIVSAD----------NNEGRA--T 507
Cdd:PRK13483 436 TT--PDwgqvsrgGNIYGNPDLKPETSLNKELGLYYDLGSGLtASLTVFYNEFKDKITRVAcpatqctdgpNQFGADptT 513
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1104735689 508 YKNAGQTRRRGLELGFEQQFAGDWQLTTSWTLLDARYRSNACAGTGSdctgNRIPgiaRNMGYLGLEYAPYSGWYGGADI 587
Cdd:PRK13483 514 YVNIDEAVTQGVEASLSYPITSTLSLSGNYTYTDSEQKSGAYKGSPL----NQLP---KHLFQASLNWEPTDRLNSWARV 586
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1104735689 588 RY----MSNIEADDPNTVSAPSYTVSSLNTGYKwLVDNwtVDLSGRIDNLFNRKyvgsviVNESNGRYYESapGRNYGVG 663
Cdd:PRK13483 587 NYrgeeSQPTTGPSSSSFIAPSYTFLDLGANYQ-LTDN--LKLSAGIYNLFDKE------INYEEYGYVED--GRRYWLG 655
|
....*
gi 1104735689 664 LNVSY 668
Cdd:PRK13483 656 MTYSF 660
|
|
| PRK13484 |
PRK13484 |
IreA family TonB-dependent siderophore receptor; |
1-668 |
5.75e-19 |
|
IreA family TonB-dependent siderophore receptor;
Pssm-ID: 139605 [Multi-domain] Cd Length: 682 Bit Score: 91.22 E-value: 5.75e-19
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1104735689 1 MIVSATPVSHGLSelDTPAAVSVVYGEDMRRaQPQVNLSEGLAGVPGLQIlNRQNYAQDLqlSIRGFGSRSTFgvrgirI 80
Cdd:PRK13484 33 LVVTASGFTQQLR--NAPASVSVITSEQLQK-KPVSDLVDAVKDVEGISI-TGGNEKPDI--SIRGLSGDYTL------I 100
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1104735689 81 YVDGIPA----TMPDGQGQTSNIDI---GSIDHVDVLRGPFSALYGNSS-GGVINVVTKkgqqPDTLKagSWYGSYGsWR 152
Cdd:PRK13484 101 LVDGRRQsgreSRPNGSGGFEAGFIppvEAIERIEVIRGPMSSLYGSDAiGGVINIITK----PVNNQ--TWDGVLG-LG 173
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1104735689 153 NSLQASGSTGDGTHA------------------GDVDYTASVSRFTTHGYRDhsgaSKNLaNARLGVRIDDDSTLTLLVN 214
Cdd:PRK13484 174 GIIQEHGKFGNSTTNdfylsgplikdklglqlyGGMNYRKEDSISQGTPAKD----NKNI-TATLQFTPTESQKFVFEYG 248
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1104735689 215 STHIQADDPGGLTPGEWRANPEQVAPNVTL--YNARKtvdqtqaglHYERSFGDNDDLSVMTYAGIRETTQyqsipstaq 292
Cdd:PRK13484 249 KNNQVHTLTPGESLDAWTMRGNLKQPNSKRetHNSRS---------HWVAAWNAQGEILHPEIAVYQEKVI--------- 310
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1104735689 293 tKSQKFGVIDLTRH--YQGIDTRWTHRDTLFSLPVSATVGLDYETMSEQrkgYQNFTQTDLGQKGALRRDETNLMWNLDP 370
Cdd:PRK13484 311 -REVKSGKKDKYNHwdLNYESRKPEITNTIIDAKVTAFLPENVLTIGGQ---FQHAELRDDSATGKKTTETQSVSIKQKA 386
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1104735689 371 YF-QTAWQLSDKWSLDAGVRLstisfdsDDHYLANgddsgdkryHQWLPAASLKYAIDDSWNTYLSAGKGFETPTITELS 449
Cdd:PRK13484 387 VFiENEYAATDSLALTGGLRL-------DNHEIYG---------SYWNPRLYAVYNLTDNLTLKGGIAKAFRAPSIREVS 450
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1104735689 450 -----NRPDGKSGL--NLGLKPSTNKTIEWGTKKRIGYGL-LNAAVFQTDTRNEIVSADNNE-----GRAT--YKNAGQT 514
Cdd:PRK13484 451 pgfgtLTQGGASIMygNRDLKPETSVTEEIGIIYSNDSGFsASATLFNTDFKNKLTSYDIGTkdpvtGLNTfiYDNVGEA 530
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1104735689 515 RRRGLELGFEQQFAGDWQLTTSWTLLDARYRSNACAGTGSDCTG---NRIPGIARNmGYLGLEYAPYSGWYggADIRYM- 590
Cdd:PRK13484 531 NIRGVELATQIPVYDKWHVSANYTFTDSRRKSDDESLNGKSLKGeplERTPRHAAN-AKLEWDYTQDITFY--SSLNYTg 607
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1104735689 591 SNIEADDPNTVSAPSYT--VSSLNTGYKWLVDNWTVdLSGRIDNLFNRKyvgSVIVNESNGRyYESAPGRNYGVGLNVSY 668
Cdd:PRK13484 608 KQIWAAQRNGAKVPRVRngFTSMDIGLNYQILPDTL-INFAVLNVTDRK---SEDIDTIDGN-WQVDEGRRYWANVRVSF 682
|
|
| PRK09840 |
PRK09840 |
catecholate siderophore receptor Fiu; Provisional |
15-656 |
9.21e-19 |
|
catecholate siderophore receptor Fiu; Provisional
Pssm-ID: 182105 [Multi-domain] Cd Length: 761 Bit Score: 90.64 E-value: 9.21e-19
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1104735689 15 LDTPAAVSVVyGEDMRRAQPQVNLSEGLAGVPGLQIL---NRQNYAQDLQLSIRGFGSRSTfgvrgirIYVDGIPatmpd 91
Cdd:PRK09840 69 ADTTQTITVI-SEQVIKDQGATNLTEALRNVPGVGTFfagENGNTTTGDAIYMRGFDTSNS-------IYVDGIR----- 135
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1104735689 92 gqgqtsniDIGSI-------DHVDVLRGPFSALYGNSS-GGVINVVTKKGQQPDTLKAGSWYGSYGSWRNSLQASGSTGD 163
Cdd:PRK09840 136 --------DIGSIsrdtfntEQVEVIKGPSGTDYGRSApTGSINMISKQPRNDSGIDASASIGSAWFRRGTLDVNQVIGD 207
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1104735689 164 GTHAgdvdytasvsRFTTHGYRDHSGASKNLANARLGVR----IDDDSTLTLLVNSTHIQADD-----------PGGLTP 228
Cdd:PRK09840 208 TTAV----------RLNVMGEKTHDAGRDKVKNERYGVApsvaFGLGTANRLYLNYLHVTQNNtpdggiptiglPGYSAP 277
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1104735689 229 GEWRANPEQvAPNVTLYNARKT------VDQTQAGLHYERSFGDNDDLSVMTYAGIRE---------------TTQYQSI 287
Cdd:PRK09840 278 SAGRAALNH-AGKVDTHNFYGTdsdyddSTTDTATMRFEHDINDNTTLRNTTRWSRVKqdylltaimggasniTTPTPSD 356
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1104735689 288 PST------AQTKSQKFGVidLTRHyqgidTRWThrDTLFSLPVSATVGLDYETMSEQRKGY----------------QN 345
Cdd:PRK09840 357 VNTwtwsrtANTKDVSNKI--LTNQ-----TNLT--STFYTGSIGHDVSTGVEFTRETQTNYgvnpvtlpavnlyhpdSS 427
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1104735689 346 FTQTDLGQKGALRRDETNlmwNLDPY-FQTAwQLSDKWSLDAGVRLstisfdsdDHY------LANGDDSGDKRYHQWLP 418
Cdd:PRK09840 428 IHPGGLTRNGANANGQTD---TFAIYaFDTL-QLTRDWELNGGIRL--------DNYhteydsATACGGSGRGAITCPAG 495
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1104735689 419 AASLK---------------------YAIDDSWNTYLSAGKGFETPTIT--ELSNRPDGKSGLNLGLKPSTNKTIEWGTK 475
Cdd:PRK09840 496 VAKGSpvttvdtaksgnlvnwkagalYKLTENGNVYINYAVSQQPPGGSnfALAQSGSGNSANRTDFKPQKANTSEIGTK 575
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1104735689 476 -----KRIGyglLNAAVFQTDTRNEIVSADNNegraTYKNAGQTRRRGLELGFEQQFAGDWQLTTSWTLLDARYRS-NAC 549
Cdd:PRK09840 576 wqvldKRLL---LTAALFRTDIENEVEQNDDG----TYSQYGKKRVEGYELSVAGNITPAWQVIAGYTQQKATVKNgKDV 648
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1104735689 550 AGTGSdctgNRIPGIARNMGYLGLEYAPYSGWYGGADIRYMSNIEADDPNTVSAPSYTvsslnTGYkWLVD-------NW 622
Cdd:PRK09840 649 AQDGS----SSLPYTPEHAFTLWSQYQATDDLSVGGGARYIGSMHRGSDGAVGTPAFT-----EGY-WVADaklgyrvNR 718
|
730 740 750
....*....|....*....|....*....|....
gi 1104735689 623 TVDLSGRIDNLFNRKYVGSviVNESNGRYYESAP 656
Cdd:PRK09840 719 NLDLQLNVYNLFDTDYVAS--INKSGYRYHPGEP 750
|
|
| PRK13486 |
PRK13486 |
TonB-dependent receptor; |
1-668 |
2.15e-16 |
|
TonB-dependent receptor;
Pssm-ID: 139606 [Multi-domain] Cd Length: 696 Bit Score: 83.15 E-value: 2.15e-16
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1104735689 1 MIVSATPVSHGLSelDTPAAVSVVYGEDMRRAQPQvNLSEGLAGVPGLQILNRQNYAQDLQLSIRGFGSRSTFgvrgirI 80
Cdd:PRK13486 28 MIVSASGYEKKLT--NAAASVSVISQEELQSSQYH-DLAEALRSVEGVDVESGTGKTGGLEISIRGMPASYTL------I 98
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1104735689 81 YVDGIPatmpdgQGQTSNID--------------IGSIDHVDVLRGPFSALYGNSS-GGVINVVTKKGQQP--DTLKAGS 143
Cdd:PRK13486 99 LIDGVR------QGGSSDVTpngfsamntgfmppLAAIERIEVIRGPMSTLYGSDAmGGVVNIITRKNADKwlSSVNAGL 172
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1104735689 144 WYGSYGSWRNSLQA----SGSTGDGTHAGDVDYTASVSRFTTHGYRDHSGASK-----NLANARLGVRID----DDSTLT 210
Cdd:PRK13486 173 NLQESNKWGNSSQFnfwsSGPLVDDSVSLQVRGSTQQRQGSSVTSLSDTAATRipyptESQNYNLGARLDwkasEQDVLW 252
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1104735689 211 LLVNSTHIQADDP----GGLTPGEWRanpeqvapnvTLYNARKTVdqtQAGLHYERSFGdnddlSVMTYAGIRETTQYQS 286
Cdd:PRK13486 253 FDMDTTRQRYDNRdgqlGSLTGGYDR----------TLRYERNKI---SAGYDHTFTFG-----TWKSYLNWNETENKGR 314
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1104735689 287 IPSTAQTKSQKFGVIDLTRHYQgiDTRWTHRDTLFSlPVS----ATVGLDYETmSEQRKGyqnftqTDLGQKGALRRDET 362
Cdd:PRK13486 315 ELVRSVLKRDKWGLAGQPRELK--ESNLILNSLLLT-PLGeshlVTVGGEFQS-SSMKDG------VVLASTGETFRQKS 384
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1104735689 363 nlmWNLdpYFQTAWQLSDKWSLDAGVRLstisfdsdDHYLANGDdsgdkryhQWLPAASLKYAIDDSWNTYLSAGKGFET 442
Cdd:PRK13486 385 ---WSV--FAEDEWHLTDALALTAGSRY--------EHHEQFGG--------HFSPRAYLVWDVADAWTLKGGVTTGYKA 443
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1104735689 443 PTITELSNRPDGKSGL-------NLGLKPSTNKTIEWGTKKRIGYGL-LNAAVFQTDTRNEIVSADNNEGRATYKNAGQT 514
Cdd:PRK13486 444 PRMGQLHKGISGVSGQgktnllgNPDLKPEESVSYEAGVYYDNPAGLnANVTGFMTDFSNKIVSYSINDNTNSYVNSGKA 523
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1104735689 515 RRRGLElgfeqqFAGDWQLTTSWTLLDARYRSNACAGTGSDCTGNRIPGIARNMGYLGLEYA---PYSGW----YGGADI 587
Cdd:PRK13486 524 RLHGVE------FAGTLPLWSEDVTLSLNYTWTRSEQRDGDNKGAPLSYTPEHMVNAKLNWQiteEVASWlgarYRGKTP 597
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1104735689 588 RYMSNIEA--------DDPNTVSAPSYTVssLNTGYKWLVDNwTVDLSGRIDNLFNRKYVGSVIVNESN-----GRYYES 654
Cdd:PRK13486 598 RFTQNYSSlsavqkkvYDEKGEYLKAWTV--VDAGLSWKMTD-ALTLNAAVNNLLNKDYSDVSLYSAGKstlyaGDYFQT 674
|
730 740
....*....|....*....|..
gi 1104735689 655 A--------PGRNYGVGLNVSY 668
Cdd:PRK13486 675 GssttgyviPERNYWMSLNYQF 696
|
|
| PRK14050 |
PRK14050 |
TonB-dependent siderophore receptor; |
18-641 |
2.74e-14 |
|
TonB-dependent siderophore receptor;
Pssm-ID: 237595 [Multi-domain] Cd Length: 728 Bit Score: 76.38 E-value: 2.74e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1104735689 18 PAAVSVVYGEDMRRAQPQVNLSEGLAGVPGLQilnRQNYAQDLQ---LSIRGFGSRSTfGVrgiriYVDGIPaTMPDGQG 94
Cdd:PRK14050 80 PQSVSVVGRQEMDDRGVTNKVDEALRYTPGVL---SQPFGTDGDtdwFYIRGFDATQT-GV-----FLDGLN-LFSYGFG 149
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1104735689 95 QTSnIDIGSIDHVDVLRGPFSALYGNSS-GGVINVVTKKGQQPDTLKAGSWYGSYGSWRNSLQASGSTGDgthAGDVDYT 173
Cdd:PRK14050 150 GFQ-IDPFMLERVEVLKGPASVLYGGSNpGGIVNMVSKRPLDEPLYYTEIGINSYGNAFTGFDVGDKLSD---DGTVRYR 225
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1104735689 174 ASVSRFTTHGYRDHSGASKNLANARLGVRIDDDSTLTLLVNSTHI-QADDPGGLTP----------GEWRANPEQVAPNV 242
Cdd:PRK14050 226 VTGKVAGGDNYSDYSEDLRGFIMPQITYAPDDATSLTVYGYLSGLdQVHVGNGFLPyvgtvvdapfGKIDRDAFYGEPDI 305
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1104735689 243 TLYnarkTVDQTQAGLHYERSFgDND----DLSVMTYAGIRETTQY----------QSIPSTAQTKSQKFGVIDLTR-HY 307
Cdd:PRK14050 306 DNG----SYAQQMLGYEFSHEF-DNGwtfsQNARYGHLHKHEKGPYtygyvggatgLPDPTGPDYMLNRIGFEHRSKvDS 380
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1104735689 308 QGIDTRWTHRDTLFSLPVSATVGLDYE--------------TMSEQRKGY-----QNFTQTDlgqkGALRRDETNLmwnl 368
Cdd:PRK14050 381 FSIDNRLEGEFDTGALTHNLLFGLDYKyyrldqvqaccgatPISATNPVYgttqgANFVYLD----QILTQQQIGI---- 452
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1104735689 369 dpYFQTAWQLSDKWSLDAGVRLSTISFDSDDHYLANGDDSGDKRYHQwlpaASLKYAIDDSWNTYLSAGKGFeTPTITEL 448
Cdd:PRK14050 453 --YAQDQIRFGDGWLVTLNGRYDYVDTDSDARIGTSYESNDGALSGR----AGLAYEFDNGLTPYVSAATFF-NPLVGTL 525
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1104735689 449 SNRPdgksglnlGLKPSTNKTIEWGTKKRIGY--GLLNAAVFQTDTRNEIVSADnneGRATYKNAGQTRRRGLELGFEQQ 526
Cdd:PRK14050 526 ASGP--------PLKPEEGEQYEAGIKYEPSFidGLITASVFQITKKNVTVTDP---LTFASTQLGEVRSRGFELEGKVN 594
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1104735689 527 FAGDWQLTTSWTLLDARYRSNAcagtGSDCTGNRIPGIARNMGYLGLEYAPYSGWYG----GADIRYMSNIEADDPNTVS 602
Cdd:PRK14050 595 LDDNWKALASFTYTDLEITEDA----NPSLIGNSPYLVPETQASLWLDYAVTDGAFEgvslGAGVRYQGESWADEANTLK 670
|
650 660 670
....*....|....*....|....*....|....*....
gi 1104735689 603 APSYTVSSLNTGYKwlVDNWTVDLSgrIDNLFNRKYVGS 641
Cdd:PRK14050 671 VPAATLFDAAIRYE--KNDWGASLN--VANLFDKEYVAG 705
|
|
| PRK13513 |
PRK13513 |
ligand-gated channel protein; |
1-670 |
8.93e-14 |
|
ligand-gated channel protein;
Pssm-ID: 184104 [Multi-domain] Cd Length: 659 Bit Score: 74.80 E-value: 8.93e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1104735689 1 MIVSATPVSHGLSelDTPAAVSVVYGEDM-RRAQPQVnlSEGLAGVPGLQILNRqnyAQDLQLSIRGFGSRST-FGVRGI 78
Cdd:PRK13513 38 MVVTASGFQQRIQ--DAPASISVVTREQLeNKAYRDV--TDALKDVPGVVVTGG---GSTSDISIRGMAAKYTlILVDGK 110
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1104735689 79 RIYVDGipaTMPDGQGqtSNIDIG------SIDHVDVLRGPFSALYGNSS-GGVINVVTKKGQQpdtlkagSWYGSYgSW 151
Cdd:PRK13513 111 RVDTRS---TRPNSDG--SGIEQGwlpplaAIERIEVVRGPMSSLYGSDAmGGVINIITRKVQK-------EWHGSL-RA 177
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1104735689 152 RNSLQASGSTGDgTHAGDVdYTAS----------VSRFTTH--------GYRDHSGASknlANARLGVRIDDDSTLTLLV 213
Cdd:PRK13513 178 DATLQEDSKSGD-IFQTNA-YASGplidgllglkVSGLLSHrsedkiidGYNEQRMRN---GTATFSLTPDDNNEFDFEI 252
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1104735689 214 nSTHIQADDPgglTPGEWRAnpEQVAPNVTLYNaRKTVDQTQAGLHyersfgdnDDLSVMTYAGIRETTQyqsiPSTaQT 293
Cdd:PRK13513 253 -GRYVQDRNS---TPGRTLA--LNGTNSDTQYD-RNNYAITHNGYY--------DFGNSTSYIQRDETRN----PSR-QM 312
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1104735689 294 KSQkfgvidltrhyqgidtrwthrDTLFSLPVSATVGLDYETMSEQRKgYQNFtqTDLGQKGALRRDETNLM-WNLDPYF 372
Cdd:PRK13513 313 KSV---------------------DTIFNTQTSFLLDDHTLSLGGQYR-YEEL--YDKGNQLPSASDLNKLTrWSWALFA 368
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1104735689 373 QTAWQLSDKWSLDAGVRLstisfDSDDHYLANgddsgdkryhqWLPAASLKYAIDDSWNTYLSAGKGFETPTITELS--- 449
Cdd:PRK13513 369 EDEWQMTNDFALTGGIRM-----DQDQNYGTH-----------WTPRLYGVWHLADQWTLKGGVSTGYRSPDLRQATdnw 432
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1104735689 450 NRPDGKSGLN---LG---LKP--STNKTIE--WGTKKRIGYGLlnaAVFQTDTRNEIV----------SADNNEGRATYK 509
Cdd:PRK13513 433 GQLTGGGGLPaliLGnsdLKPekSISQEIGilWDNQENLNASV---TLFNTDFKDKITevrncdttntDGQCVFNGINYD 509
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1104735689 510 ------NAGQTRRRGLELGFEQQFAGDWQLTTSWTLLDARYRSNACAGTGSdctgNRIPgiaRNM--GYLGLEYAP-YSG 580
Cdd:PRK13513 510 fisdriNVDKANMRGVEATFNWDINQAWSLATNYTFTQSEQKSGAFAGQPL----NQMP---KHManATLNWQTTEdFAT 582
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1104735689 581 W----YGGADIRYMSNIEADDpntvSAPSYTVSSLNTGYKwLVDNwtVDLSGRIDNLFNRKyvgsvIVNESNGRYYEsap 656
Cdd:PRK13513 583 WirinYRGKTSEYLNRTSMGS----GTPSYTFVDLGASYQ-LTKE--LRLMGGVYNLLDKR-----VDIDVNDKVLD--- 647
|
730
....*....|....
gi 1104735689 657 GRNYGVGLNvsYAF 670
Cdd:PRK13513 648 GRRYMVGAS--YDF 659
|
|
| PRK14049 |
PRK14049 |
ferrioxamine B receptor precursor protein; Provisional |
15-600 |
2.51e-11 |
|
ferrioxamine B receptor precursor protein; Provisional
Pssm-ID: 172541 [Multi-domain] Cd Length: 726 Bit Score: 66.85 E-value: 2.51e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1104735689 15 LDTPAAVSVVYGEDMRRAQPQVnLSEGLAGVPGLQIlnrqnyaqdlqlSIRGFGSR-STFGVRGIRIYVDGI---PATMP 90
Cdd:PRK14049 77 LETPQSISSVTEQQLKDRNPQT-LLETLAYTPGARV------------GAFGFDPRfDAFFVRGFDVTYTGVfrdNLRQP 143
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1104735689 91 DGQGQTSNIDIGSIDHVDVLRGPFSALYGNS-SGGVINVVTKKGQQPDTLKAGSWYGSYGSWRNSLQASGSTGDGthaGD 169
Cdd:PRK14049 144 GASSSIFKTEPYGLEGVSILRGPSSALYGASgAGGLFNLITKRPTEEPLREVQVQYGTNNRYQGQFDFSGPVNET---DP 220
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1104735689 170 VDYtasvsRFTTHGyRDHSGASKNLANARLGV------RIDDDSTLTLLVNSTHIQAddpGGLTPGEWRANPEQVAPNVT 243
Cdd:PRK14049 221 VYY-----RLTGLL-RDADTEQVGVPDDRAYIapaftwKPDEDTRLTVLGEYSRTKT---GGTAAYYNDPLTGEVTDIFA 291
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1104735689 244 LYNARKTVDQTQAGLHYERSFGDNDDLSVMTYAGIRETT-------QYQSIPSTAQTKSQKFGVIDLTRHYQGIDTRWTH 316
Cdd:PRK14049 292 GNPAFNDSVQKQGRIGYEFEHRLNDTFVFRQNARVSTLNidadwafAYAPNAADPTLLDSSAGTYDERLTAFVIDNQLEA 371
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1104735689 317 RDTLFSLPVSATVGLDYeTMSEQR----KGYQNFTQTDLGQKGA------LRRDETNLMWNLDPYFQTAWQLsDKWSLDA 386
Cdd:PRK14049 372 KFDTGAFEHTLLAGVDY-TKLRFRalngRGVSPPLDTKNPTQGRpvaaidFSTRTVQDQWQLGTYLQDQIRY-DAWTLTA 449
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1104735689 387 GVRLSTISFDSDDHYLANGDDSG-DKRYHQWLPAASLKYAID------DSWNTYLSAGKGFETPTitelsNRPdgksgln 459
Cdd:PRK14049 450 GGRYDWVSTDTDTTDLATDSLTTvSQKDKEFSGRIGLTYETDfglapyISYSTAFSPNAGFNRAT-----NQP------- 517
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1104735689 460 lgLKPSTNKTIEWGTKKRI--GYGLLNAAVFQTDTRNEIV--SADNNEGRATYK-NAGQTRRRGLELGFEQQFAGDWQLT 534
Cdd:PRK14049 518 --FKPTESEQQEVGVKYLLpnSNTLITAALFNIDQTNGLYyeVVFLAAGPTNIQvQRGKLRSRGFELEANTSLDNGLSLI 595
|
570 580 590 600 610 620 630
....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1104735689 535 TSWTLLDARYRSNAcagtgSDCTGNRIPGIARNMGYLGLEY-----APYSGWYGGADIRYMSNIEADDPNT 600
Cdd:PRK14049 596 ASYTYTDVKIIQGP-----EGTIGNEVSSVPNHMASAWAHYtlpegGPLYGLGLGAGARFVGSSYGNDQNT 661
|
|
| PRK13524 |
PRK13524 |
FepA family TonB-dependent siderophore receptor; |
21-163 |
3.47e-11 |
|
FepA family TonB-dependent siderophore receptor;
Pssm-ID: 237410 [Multi-domain] Cd Length: 744 Bit Score: 66.59 E-value: 3.47e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1104735689 21 VSVVYGEDMRRAQPQVNLSEGLAGVPGLQILNRQNYAQ---DLQLSIRGFGSRSTFgvrgirIYVDGIPATM-------- 89
Cdd:PRK13524 55 VSTITAEDIRKRPPANDVSEIIRTMPGVNLTGNSTSGQrgnNRQIDIRGMGPENTL------ILIDGKPVSSrnsvrygw 128
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1104735689 90 ---PDGQGQTSNIDIGSIDHVDVLRGPFSALYGN-SSGGVINVVTKKgqqPDTLKAGSWYGSY---------GSWRNSLQ 156
Cdd:PRK13524 129 rgeRDTRGDTNWVPPEMIERIEVLRGPAAARYGNgAAGGVVNIITKK---PTGEWHGSWNTYFnapehkaegATKRTNFS 205
|
....*..
gi 1104735689 157 ASGSTGD 163
Cdd:PRK13524 206 LSGPLGD 212
|
|
| btuB |
PRK10641 |
TonB-dependent vitamin B12 receptor BtuB; |
1-173 |
5.08e-09 |
|
TonB-dependent vitamin B12 receptor BtuB;
Pssm-ID: 236730 [Multi-domain] Cd Length: 614 Bit Score: 59.24 E-value: 5.08e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1104735689 1 MIVSAT----PVSHGLseldtpAAVSVVYGEDMRRAQPQvNLSEGLAGVPGLQILNRQNYAQDLQLSIRGFGSRSTFgvr 76
Cdd:PRK10641 28 LVVTANrfqqPVSTVL------APTTVVTRDDIDRWQSK-SVNDVLRRLPGVDIAQNGGLGQLSSLFIRGTNSSHVL--- 97
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1104735689 77 girIYVDGIPATMP--DGQGQTSNIDIGSIDHVDVLRGPFSALYGNSS-GGVINVVTKKGQQPDTLKAG---SWYGSY-G 149
Cdd:PRK10641 98 ---VLIDGVRLNQAgiSGSADLSQIPISLVQRIEYIRGPRSAVYGSDAiGGVVNIITTRDKPGTTLSAGwgsNGYQNYdG 174
|
170 180
....*....|....*....|....
gi 1104735689 150 SWRnslQASGSTGDGTHAGDVDYT 173
Cdd:PRK10641 175 STQ---QQLGDNTRVTLAGDYTYT 195
|
|
| OMP_b-brl_3 |
pfam14905 |
Outer membrane protein beta-barrel family; This family includes proteins annotated as TonB ... |
381-668 |
2.39e-07 |
|
Outer membrane protein beta-barrel family; This family includes proteins annotated as TonB dependent receptors. But it is also likely to contain other membrane beta barrel proteins of other functions.
Pssm-ID: 434300 [Multi-domain] Cd Length: 407 Bit Score: 53.43 E-value: 2.39e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1104735689 381 KWSLDAGVRL--STISFDSDdhylaNGDDSGDKRYHQWLPAASLKYAIDDSWNTYLSAGKG--FETPTITELSNRPDGKS 456
Cdd:pfam14905 127 KWSYQAGLRAeyTDIDGDSV-----TTNETFKRNYFNLFPSASLSYKLNDNNSLQLSLYYRriINRPSYWDLNPFRNYSD 201
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1104735689 457 GLNL-----GLKPSTNKTIEWGTKKRIGYgLLNAAVFQTDTRNEIVSADNNEG---RATYKNAGQTRRRGLELGFEQQFA 528
Cdd:pfam14905 202 PYNYsqgnpNLKPEYTNSFELGYTYKWKL-SLSLSYRYTNDVIQQTFITDDNDnvtYTTYENLGKSNSYGLELSASFNPT 280
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1104735689 529 GDWQLTTSWTLLDARYRSNACAGTGSDCTGnripgiarNMGYLGLEYAPYSGWYGGADIRYMSNIeaDDPNTVSAPSYTV 608
Cdd:pfam14905 281 KWWSLNGNLNGYYNKYKIDGSLNSDFSNFG--------FNWNLNNTFTLPKGWSLQLNGNYRSPR--VTGQGKIKPFYSL 350
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1104735689 609 sSLNTGYKWLVDNWTVDLSgrIDNLFN-RKYVGSVIVNESNGRYYESAPGRNYgVGLNVSY 668
Cdd:pfam14905 351 -DLGLSKSFLKKKLTLSLN--VNDIFNtRKFRSTTNYDNGFIQSYNNKWDSRS-VRLSLSY 407
|
|
| PRK13528 |
PRK13528 |
outer membrane receptor FepA; Provisional |
14-132 |
3.68e-07 |
|
outer membrane receptor FepA; Provisional
Pssm-ID: 237413 [Multi-domain] Cd Length: 727 Bit Score: 53.61 E-value: 3.68e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1104735689 14 ELDTPAAVSVVYGEDMRRAQPQVNLSEGLAGVPGLQILNRQ---NYAQDLQLSIRGFGSRSTFgvrgirIYVDGIPATMP 90
Cdd:PRK13528 46 ELKQQPGVSIITAEDIKKRPPVNDLSDIIRKMPGVNLTGNSasgTRGNNRQIDIRGMGPENTL------ILIDGVPVTSR 119
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|....
gi 1104735689 91 -----------DGQGQTSNIDIGSIDHVDVLRGPFSALYGN-SSGGVINVVTKK 132
Cdd:PRK13528 120 nsvryswrgerDTRGDTNWVPPEMVERIEVIRGPAAARYGSgAAGGVVNIITKR 173
|
|
| OMP_RagA_SusC |
TIGR04056 |
TonB-linked outer membrane protein, SusC/RagA family; This model describes a distinctive clade ... |
20-135 |
9.98e-06 |
|
TonB-linked outer membrane protein, SusC/RagA family; This model describes a distinctive clade among the TonB-linked outer membrane proteins (OMP). Members of this family are restricted to the Bacteriodetes lineage (except for Gemmatimonas aurantiaca T-27 from the novel phylum Gemmatimonadetes) and occur in high copy numbers, with over 100 members from Bacteroides thetaiotaomicron VPI-5482 alone. Published descriptions of members of this family are available for RagA from Porphyromonas gingivalis, SusC from Bacteroides thetaiotaomicron, and OmpW from Bacteroides caccae. Members form pairs with members of the SusD/RagB family (pfam07980). Transporter complexes including these outer membrane proteins are likely to import large degradation products of proteins (e.g. RagA) or carbohydrates (e.g. SusC) as nutrients, rather than siderophores. [Transport and binding proteins, Unknown substrate]
Pssm-ID: 274948 [Multi-domain] Cd Length: 981 Bit Score: 49.13 E-value: 9.98e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1104735689 20 AVSVVYGEDMRRAqPQVNLSEGLAG-VPGLQILNRQNyaqdlqlsirGFGSRSTFGVRGIR---------IYVDGIPatm 89
Cdd:TIGR04056 97 AVSTVKAKELKKV-PVSNLSNALQGkVAGVIITQSSG----------EPGGDAEIWIRGISsfggnnsplYVIDGVP--- 162
|
90 100 110 120
....*....|....*....|....*....|....*....|....*....
gi 1104735689 90 pdGQGQTSNIDIGSIDHVDVLRGPFS-ALYGnSSG--GVINVVTKKGQQ 135
Cdd:TIGR04056 163 --RDNGLSDLNPEDIESISVLKDASAtAIYG-SRGanGVILITTKRGKE 208
|
|
| PRK10003 |
PRK10003 |
ferric-rhodotorulic acid outer membrane transporter; Provisional |
345-670 |
1.68e-04 |
|
ferric-rhodotorulic acid outer membrane transporter; Provisional
Pssm-ID: 236640 [Multi-domain] Cd Length: 729 Bit Score: 44.86 E-value: 1.68e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1104735689 345 NFTQTDLGQKgALRRDETNLMWNLdpYFQTAWQLSDKWSLDAGVRLSTISFDSDDHYLANGDDSgdkryhqwlPAASLKY 424
Cdd:PRK10003 433 NFPQTDWSPQ-SLAQDDTTHMKSL--YAATRVSLADPLHLILGARYTNWRVDTLTYSMEKNHTT---------PYAGLVY 500
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1104735689 425 AIDDSWNTYLSAGKGFETPTITELSNRpdgksglnlGLKPSTNKTIEWGTKKRIGYGLLNA--AVFQTDTRNEIVSA--- 499
Cdd:PRK10003 501 DINDNWSTYASYTSIFQPQNDRDSSGK---------YLAPITGNNYELGLKSDWMNSRLTTtlAIFRIEQDNVAQSTgtp 571
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1104735689 500 -DNNEGRATYKNAGQTRRRGLELGFEQQFAGDWQLTTSWTlldaRYRSNacagtgsDCTGNRI-PGIARNMGYLGLEYA- 576
Cdd:PRK10003 572 iPGSNGETAYKAVDGTVSKGVEFELNGAITDNWQLTFGAT----RYIAE-------DNEGNAVnPNLPRTTVKLFTRYRl 640
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1104735689 577 ---PYSGWYGGADIRYMSNIEADDPNT---VSAPSYTVSSLNTGYKwLVDNWTVdlSGRIDNLFNRKY---VGSVIVnes 647
Cdd:PRK10003 641 pvmPELTVGGGVNWQNRVYTDTVTPYGtfrAEQGSYALVDLFTRYQ-VTKNFSV--QGNVNNLFDKTYdtnVEGSIV--- 714
|
330 340
....*....|....*....|...
gi 1104735689 648 ngryyESAPgRNygVGLNVSYAF 670
Cdd:PRK10003 715 -----YGAP-RN--FSITATYQF 729
|
|
| |
