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Conserved domains on  [gi|1133882596|ref|WP_076256981|]
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MULTISPECIES: stage VI sporulation protein F [Bacillales]

Protein Classification

stage VI sporulation protein F( domain architecture ID 18824072)

stage VI sporulation protein F is a transcription factor involved in spore coat assembly and spore resistance

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
SpoVIF COG5847
Stage VI sporulation protein SpoVIF, required for heat resistance [Cell cycle control, cell ...
 1-82 5.15e-31

Stage VI sporulation protein SpoVIF, required for heat resistance [Cell cycle control, cell division, chromosome partitioning];


:

Pssm-ID: 444549  Cd Length: 85  Bit Score: 103.83  E-value: 5.15e-31
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1133882596  1 MDNNFFKNLEKKTGVNMKDVFELAGSLQSANFKDEKTVRNVIKRVSQIANKPVSKDMEDKIVKSIVADGKQLDFNTISQM 80
Cdd:COG5847    4 MQKNFFDKIEKKTGVNMDDIFKLANSVQNADFSDEKTVRQLVRQVSKLANKPVSKEKEDKIVKAIVNNGIPLDMSTLSKM 83


                 ..
gi 1133882596 81 MN 82
Cdd:COG5847   84 LK 85
 
Name Accession Description Interval E-value
SpoVIF COG5847
Stage VI sporulation protein SpoVIF, required for heat resistance [Cell cycle control, cell ...
 1-82 5.15e-31

Stage VI sporulation protein SpoVIF, required for heat resistance [Cell cycle control, cell division, chromosome partitioning];


Pssm-ID: 444549  Cd Length: 85  Bit Score: 103.83  E-value: 5.15e-31
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1133882596  1 MDNNFFKNLEKKTGVNMKDVFELAGSLQSANFKDEKTVRNVIKRVSQIANKPVSKDMEDKIVKSIVADGKQLDFNTISQM 80
Cdd:COG5847    4 MQKNFFDKIEKKTGVNMDDIFKLANSVQNADFSDEKTVRQLVRQVSKLANKPVSKEKEDKIVKAIVNNGIPLDMSTLSKM 83


                 ..
gi 1133882596 81 MN 82
Cdd:COG5847   84 LK 85
SpoVIF pfam14069
Stage VI sporulation protein F; The sporulation-specific SpoVIF (YjcC) protein of Bacillus ...
 6-77 3.95e-24

Stage VI sporulation protein F; The sporulation-specific SpoVIF (YjcC) protein of Bacillus subtilis is essential for the development of heat-resistant spores. Its expression is governed by SigK.


Pssm-ID: 404879  Cd Length: 72  Bit Score: 86.10  E-value: 3.95e-24
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1133882596  6 FKNLEKKTGVNMKDVFELAGSLQSANFKDEKTVRNVIKRVSQIANKPVSKDMEDKIVKSIVADGKQLDFNTI 77
Cdd:pfam14069  1 FDRIKKKTNVNKEDIKKLANSVQNADLQDEATVRQLIKQVAAIANKPVSKEKEDKIVKAILNQKIPNDTFSL 72
 
Name Accession Description Interval E-value
SpoVIF COG5847
Stage VI sporulation protein SpoVIF, required for heat resistance [Cell cycle control, cell ...
 1-82 5.15e-31

Stage VI sporulation protein SpoVIF, required for heat resistance [Cell cycle control, cell division, chromosome partitioning];


Pssm-ID: 444549  Cd Length: 85  Bit Score: 103.83  E-value: 5.15e-31
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1133882596  1 MDNNFFKNLEKKTGVNMKDVFELAGSLQSANFKDEKTVRNVIKRVSQIANKPVSKDMEDKIVKSIVADGKQLDFNTISQM 80
Cdd:COG5847    4 MQKNFFDKIEKKTGVNMDDIFKLANSVQNADFSDEKTVRQLVRQVSKLANKPVSKEKEDKIVKAIVNNGIPLDMSTLSKM 83


                 ..
gi 1133882596 81 MN 82
Cdd:COG5847   84 LK 85
SpoVIF pfam14069
Stage VI sporulation protein F; The sporulation-specific SpoVIF (YjcC) protein of Bacillus ...
 6-77 3.95e-24

Stage VI sporulation protein F; The sporulation-specific SpoVIF (YjcC) protein of Bacillus subtilis is essential for the development of heat-resistant spores. Its expression is governed by SigK.


Pssm-ID: 404879  Cd Length: 72  Bit Score: 86.10  E-value: 3.95e-24
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1133882596  6 FKNLEKKTGVNMKDVFELAGSLQSANFKDEKTVRNVIKRVSQIANKPVSKDMEDKIVKSIVADGKQLDFNTI 77
Cdd:pfam14069  1 FDRIKKKTNVNKEDIKKLANSVQNADLQDEATVRQLIKQVAAIANKPVSKEKEDKIVKAILNQKIPNDTFSL 72
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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