NCBI Home Page NCBI Site Search page NCBI Guide that lists and describes the NCBI resources
Conserved domains on  [gi|1148540066|ref|WP_077288085|]
View 

electron transfer flavoprotein-ubiquinone oxidoreductase [Cognaticolwellia aestuarii]

Protein Classification

electron transfer flavoprotein-ubiquinone oxidoreductase( domain architecture ID 11428947)

electron transfer flavoprotein-ubiquinone oxidoreductase accepts electrons from ETF and reduces ubiquinone

CATH:  3.30.70.20|3.30.9.90|3.50.50.60
EC:  1.5.5.1
Gene Ontology:  GO:0004174|GO:0022900|GO:0046872|GO:0051539
SCOP:  4000064|4000127

Graphical summary

 Zoom to residue level

show extra options »

Show site features     Horizontal zoom: ×

List of domain hits

 Name Accession Description Interval E-value
FixC COG0644
Dehydrogenase (flavoprotein) [Energy production and conversion];
15-376 8.68e-74

Dehydrogenase (flavoprotein) [Energy production and conversion];


:

Pssm-ID: 440409 [Multi-domain]  Cd Length: 281  Bit Score: 236.02  E-value: 8.68e-74
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1148540066  15 AGPAGLSTACQLmklaqeKEQELMVCVVEKGSEVGAHILSGAVFePRALNELFPDWKEkgAPLNTAVTGDDIYLFNGEES 94
Cdd:COG0644     1 AGPAGSAAARRL------ARAGLSVLLLEKGSFPGDKICGGGLL-PRALEELEPLGLD--EPLERPVRGARFYSPGGKSV 71

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1148540066  95 AVKLPgfgvpktmhNEGNFIVSMGNVCRWLAEQAEQLGVEIFPGFPAQDIIYNDDGSVggVITGDmgldaegnqkdsfmp 174
Cdd:COG0644    72 ELPPG---------RGGGYVVDRARFDRWLAEQAEEAGAEVRTGTRVTDVLRDDGRVV--VRTGD--------------- 125

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1148540066 175 GMELKAKYTVFAEGCRGHLGKELIAKFALDAdksPQHYGLGFKEIWDIDPAKH-QEGLVVHSAGwplEKDTTGGGYLYHA 253
Cdd:COG0644   126 GEEIRADYVVDADGARSLLARKLGLKRRSDE---PQDYALAIKEHWELPPLEGvDPGAVEFFFG---EGAPGGYGWVFPL 199

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1148540066 254 ENNQVFVGLiidlnysnphlspfdefqrykhhpkiaqyleggkrvsygaramAKGGFNslPKMTMPGAVLVGCDAGTINF 333
Cdd:COG0644   200 GDGRVSVGI-------------------------------------------PLGGPR--PRLVGDGVLLVGDAAGFVDP 234

                         330       340       350       360
                  ....*....|....*....|....*....|....*....|...
gi 1148540066 334 AKIKGNHTAMKSGMLAAESIFEALAAGDEGAKDLTSFTDKYRN 376
Cdd:COG0644   235 LTGEGIHLAMKSGRLAAEAIAEALEGGDFSAEALAEYERRLRE 277
ETF_QO pfam05187
Electron transfer flavoprotein-ubiquinone oxidoreductase, 4Fe-4S; Electron-transfer ...
 446-547 3.08e-70

Electron transfer flavoprotein-ubiquinone oxidoreductase, 4Fe-4S; Electron-transfer flavoprotein-ubiquinone oxidoreductase (ETF-QO) in the inner mitochondrial membrane accepts electrons from electron-transfer flavoprotein which is located in the mitochondrial matrix and reduces ubiquinone in the mitochondrial membrane. The two redox centres in the protein, FAD and a [4Fe4S] cluster, are present in a 64-kDa monomer.


:

Pssm-ID: 461576 [Multi-domain]  Cd Length: 104  Bit Score: 220.18  E-value: 3.08e-70
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1148540066 446 NKLSFDKLSSVFLSNTNHEEEQPCHLKLADSSIPISVNLAKYNEPAQRYCPAGVYEV--ESTAEGDKFVINSQNCVHCKT 523
Cdd:pfam05187   1 GVLTFDRLTSVYLSGTNHEEDQPCHLKLKDPEVPIKVNLPKYAGPEQRYCPAGVYEYveDEEPGGPRLQINAQNCVHCKT 80

                          90       100
                  ....*....|....*....|....
gi 1148540066 524 CDIKDPSQNITWVTPEGTGGPNYP 547
Cdd:pfam05187  81 CDIKDPTQNITWVVPEGGGGPNYP 104
 
Name Accession Description Interval E-value
FixC COG0644
Dehydrogenase (flavoprotein) [Energy production and conversion];
15-376 8.68e-74

Dehydrogenase (flavoprotein) [Energy production and conversion];


Pssm-ID: 440409 [Multi-domain]  Cd Length: 281  Bit Score: 236.02  E-value: 8.68e-74
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1148540066  15 AGPAGLSTACQLmklaqeKEQELMVCVVEKGSEVGAHILSGAVFePRALNELFPDWKEkgAPLNTAVTGDDIYLFNGEES 94
Cdd:COG0644     1 AGPAGSAAARRL------ARAGLSVLLLEKGSFPGDKICGGGLL-PRALEELEPLGLD--EPLERPVRGARFYSPGGKSV 71

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1148540066  95 AVKLPgfgvpktmhNEGNFIVSMGNVCRWLAEQAEQLGVEIFPGFPAQDIIYNDDGSVggVITGDmgldaegnqkdsfmp 174
Cdd:COG0644    72 ELPPG---------RGGGYVVDRARFDRWLAEQAEEAGAEVRTGTRVTDVLRDDGRVV--VRTGD--------------- 125

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1148540066 175 GMELKAKYTVFAEGCRGHLGKELIAKFALDAdksPQHYGLGFKEIWDIDPAKH-QEGLVVHSAGwplEKDTTGGGYLYHA 253
Cdd:COG0644   126 GEEIRADYVVDADGARSLLARKLGLKRRSDE---PQDYALAIKEHWELPPLEGvDPGAVEFFFG---EGAPGGYGWVFPL 199

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1148540066 254 ENNQVFVGLiidlnysnphlspfdefqrykhhpkiaqyleggkrvsygaramAKGGFNslPKMTMPGAVLVGCDAGTINF 333
Cdd:COG0644   200 GDGRVSVGI-------------------------------------------PLGGPR--PRLVGDGVLLVGDAAGFVDP 234

                         330       340       350       360
                  ....*....|....*....|....*....|....*....|...
gi 1148540066 334 AKIKGNHTAMKSGMLAAESIFEALAAGDEGAKDLTSFTDKYRN 376
Cdd:COG0644   235 LTGEGIHLAMKSGRLAAEAIAEALEGGDFSAEALAEYERRLRE 277
ETF_QO pfam05187
Electron transfer flavoprotein-ubiquinone oxidoreductase, 4Fe-4S; Electron-transfer ...
 446-547 3.08e-70

Electron transfer flavoprotein-ubiquinone oxidoreductase, 4Fe-4S; Electron-transfer flavoprotein-ubiquinone oxidoreductase (ETF-QO) in the inner mitochondrial membrane accepts electrons from electron-transfer flavoprotein which is located in the mitochondrial matrix and reduces ubiquinone in the mitochondrial membrane. The two redox centres in the protein, FAD and a [4Fe4S] cluster, are present in a 64-kDa monomer.


Pssm-ID: 461576 [Multi-domain]  Cd Length: 104  Bit Score: 220.18  E-value: 3.08e-70
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1148540066 446 NKLSFDKLSSVFLSNTNHEEEQPCHLKLADSSIPISVNLAKYNEPAQRYCPAGVYEV--ESTAEGDKFVINSQNCVHCKT 523
Cdd:pfam05187   1 GVLTFDRLTSVYLSGTNHEEDQPCHLKLKDPEVPIKVNLPKYAGPEQRYCPAGVYEYveDEEPGGPRLQINAQNCVHCKT 80

                          90       100
                  ....*....|....*....|....
gi 1148540066 524 CDIKDPSQNITWVTPEGTGGPNYP 547
Cdd:pfam05187  81 CDIKDPTQNITWVVPEGGGGPNYP 104
FixX COG2440
Ferredoxin-like protein FixX [Energy production and conversion];
456-549 6.90e-47

Ferredoxin-like protein FixX [Energy production and conversion];


Pssm-ID: 441981 [Multi-domain]  Cd Length: 87  Bit Score: 158.44  E-value: 6.90e-47
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1148540066 456 VFLSNTNHEEEQPcHLKLADSSIPISVNLAKynePAQRYCPAGVYEVEstaEGDKFVINSQNCVHCKTCDIKDPSQNITW 535
Cdd:COG2440     1 LFLNNYNVDEDQP-HIKVKDPDICIARCLAK---PCTRYCPAGVYEIV---GDGRLQINYENCLECGTCRIKCPTQNITW 73

                          90
                  ....*....|....
gi 1148540066 536 VTPEGTGGPNYPNM 549
Cdd:COG2440    74 VYPEGGGGVNYRFG 87
PRK10015 PRK10015
oxidoreductase; Provisional
 7-393 7.03e-31

oxidoreductase; Provisional


Pssm-ID: 182194 [Multi-domain]  Cd Length: 429  Bit Score: 124.70  E-value: 7.03e-31
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1148540066   7 EFDVVIVGAGPAGlSTACQLMKLAQekeqeLMVCVVEKGSEVGAHILSGAVFEPRALNELFPDWKEKgAPLNTAVTGDDI 86
Cdd:PRK10015    5 KFDAIVVGAGVAG-SVAALVMARAG-----LDVLVIERGDSAGCKNMTGGRLYAHTLEAIIPGFAAS-APVERKVTREKI 77

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1148540066  87 YlFNGEESAVKLPGFGVPKTMHNEGNFIVSMGNVCRWLAEQAEQLGVEIFPGFPAqDIIYNDDGSVGGVITGDMGLDAeg 166
Cdd:PRK10015   78 S-FLTEESAVTLDFHREQPDVPQHASYTVLRNRLDPWLMEQAEQAGAQFIPGVRV-DALVREGNKVTGVQAGDDILEA-- 153

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1148540066 167 nqkdsfmpgmelkaKYTVFAEGCRGHLGKELiakfALDADKSPQHYGLGFKEIWDIDPAK--------HQEGLVVHSAGW 238
Cdd:PRK10015  154 --------------NVVILADGVNSMLGRSL----GMVPASDPHHYAVGVKEVIGLTPEQindrfnitGEEGAAWLFAGS 215

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1148540066 239 PlEKDTTGGGYLYhAENNQVFVGLIIDL-NYSNPHLSPFDEFQRYKHHPKIAQYLEGGKRVSYGARAMAKGGFNSLPKMT 317
Cdd:PRK10015  216 P-SDGLMGGGFLY-TNKDSISLGLVCGLgDIAHAQKSVPQMLEDFKQHPAIRPLISGGKLLEYSAHMVPEGGLAMVPQLV 293

                         330       340       350       360       370       380       390
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1148540066 318 MPGAVLVGCDAG-TINFA-KIKGNHTAMKSGMLAAESIFEALAAGDEGAKDLTSFTDKYRNSWLYDELYSTRNFgPAM 393
Cdd:PRK10015  294 NDGVMIVGDAAGfCLNLGfTVRGMDLAIASAQAAATTVIAAKERADFSASSLAQYKRELEQSCVMRDMQHFRKI-PAL 370
GG-red-SF TIGR02032
geranylgeranyl reductase family; This model represents a subfamily which includes ...
 8-353 1.01e-10

geranylgeranyl reductase family; This model represents a subfamily which includes geranylgeranyl reductases involved in chlorophyll and bacteriochlorophyll biosynthesis as well as other related enzymes which may also act on geranylgeranyl groups or related substrates. [Biosynthesis of cofactors, prosthetic groups, and carriers, Chlorophyll and bacteriochlorphyll]


Pssm-ID: 273936 [Multi-domain]  Cd Length: 295  Bit Score: 62.72  E-value: 1.01e-10
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1148540066   8 FDVVIVGAGPAGLSTACQLmklaqeKEQELMVCVVEKGSEVGAHILSGAVfePRALNELFPDWKEkgAPLNTAVTGdDIY 87
Cdd:TIGR02032   1 YDVVVVGAGPAGASAAYRL------ADKGLRVLLLEKKSFPRYKPCGGAL--SPRALEELDLPGE--LIVNLVRGA-RFF 69

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1148540066  88 LFNGEESAVKLPGFGVpktmhnegnFIVSMGNVCRWLAEQAEQLGVEIFPGFPAQDIIYNDDGSVGGVITGdmgldaegn 167
Cdd:TIGR02032  70 SPNGDSVEIPIETELA---------YVIDRDAFDEQLAERAQEAGAELRLGTRVLDVEIHDDRVVVIVRGS--------- 131

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1148540066 168 qkdsfmpGMELKAKYTVFAEGCRGHLGKeliakfALDADKSPQHYGLGFK-------EIWDIDPAKhqeglvVHsagwpL 240
Cdd:TIGR02032 132 -------EGTVTAKIVIGADGSRSIVAK------KLGLKKEPREYGVAARaevempdEEVDEDFVE------VY-----I 187

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1148540066 241 EKDTTGGGYLYH--AENNQVFVGLIIDLNYSNPHLSP-FDEF-QRYKhhpkiaqYLEGGKRVSYGARAMAKGGFNSlpKM 316
Cdd:TIGR02032 188 DRGIVPGGYGWVfpKGDGTANVGVGSRSAEEGEDPKKyLKDFlARRP-------ELKDAETVEVCGALIPIGRPDE--KL 258

                         330       340       350
                  ....*....|....*....|....*....|....*..
gi 1148540066 317 TMPGAVLVGCDAGTINFAKIKGNHTAMKSGMLAAESI 353
Cdd:TIGR02032 259 VRGNVLLVGDAAGHVNPLTGEGIYYAMRSGDIAAEVV 295
DAO pfam01266
FAD dependent oxidoreductase; This family includes various FAD dependent oxidoreductases: ...
 9-157 4.15e-10

FAD dependent oxidoreductase; This family includes various FAD dependent oxidoreductases: Glycerol-3-phosphate dehydrogenase EC:1.1.99.5, Sarcosine oxidase beta subunit EC:1.5.3.1, D-alanine oxidase EC:1.4.99.1, D-aspartate oxidase EC:1.4.3.1.


Pssm-ID: 426168 [Multi-domain]  Cd Length: 339  Bit Score: 61.26  E-value: 4.15e-10
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1148540066   9 DVVIVGAGPAGLSTACQLmklaqeKEQELMVCVVEKGSEVGAH-------ILSGAVFEP----------RALNELF---- 67
Cdd:pfam01266   1 DVVVIGGGIVGLSTAYEL------ARRGLSVTLLERGDDPGSGasgrnagLIHPGLRYLepselarlalEALDLWEelee 74

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1148540066  68 -----PDWKEKGApLNTAVT----------------GDDIYLFNGEESAVKLPGF-GVPKTMHNEGNFIVSMGNVCRWLA 125
Cdd:pfam01266  75 elgidCGFRRCGV-LVLARDeeeealekllaalrrlGVPAELLDAEELRELEPLLpGLRGGLFYPDGGHVDPARLLRALA 153

                         170       180       190
                  ....*....|....*....|....*....|..
gi 1148540066 126 EQAEQLGVEIFPGFPAQDIiyNDDGSVGGVIT 157
Cdd:pfam01266 154 RAAEALGVRIIEGTEVTGI--EEEGGVWGVVT 183
 
Name Accession Description Interval E-value
FixC COG0644
Dehydrogenase (flavoprotein) [Energy production and conversion];
15-376 8.68e-74

Dehydrogenase (flavoprotein) [Energy production and conversion];


Pssm-ID: 440409 [Multi-domain]  Cd Length: 281  Bit Score: 236.02  E-value: 8.68e-74
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1148540066  15 AGPAGLSTACQLmklaqeKEQELMVCVVEKGSEVGAHILSGAVFePRALNELFPDWKEkgAPLNTAVTGDDIYLFNGEES 94
Cdd:COG0644     1 AGPAGSAAARRL------ARAGLSVLLLEKGSFPGDKICGGGLL-PRALEELEPLGLD--EPLERPVRGARFYSPGGKSV 71

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1148540066  95 AVKLPgfgvpktmhNEGNFIVSMGNVCRWLAEQAEQLGVEIFPGFPAQDIIYNDDGSVggVITGDmgldaegnqkdsfmp 174
Cdd:COG0644    72 ELPPG---------RGGGYVVDRARFDRWLAEQAEEAGAEVRTGTRVTDVLRDDGRVV--VRTGD--------------- 125

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1148540066 175 GMELKAKYTVFAEGCRGHLGKELIAKFALDAdksPQHYGLGFKEIWDIDPAKH-QEGLVVHSAGwplEKDTTGGGYLYHA 253
Cdd:COG0644   126 GEEIRADYVVDADGARSLLARKLGLKRRSDE---PQDYALAIKEHWELPPLEGvDPGAVEFFFG---EGAPGGYGWVFPL 199

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1148540066 254 ENNQVFVGLiidlnysnphlspfdefqrykhhpkiaqyleggkrvsygaramAKGGFNslPKMTMPGAVLVGCDAGTINF 333
Cdd:COG0644   200 GDGRVSVGI-------------------------------------------PLGGPR--PRLVGDGVLLVGDAAGFVDP 234

                         330       340       350       360
                  ....*....|....*....|....*....|....*....|...
gi 1148540066 334 AKIKGNHTAMKSGMLAAESIFEALAAGDEGAKDLTSFTDKYRN 376
Cdd:COG0644   235 LTGEGIHLAMKSGRLAAEAIAEALEGGDFSAEALAEYERRLRE 277
ETF_QO pfam05187
Electron transfer flavoprotein-ubiquinone oxidoreductase, 4Fe-4S; Electron-transfer ...
 446-547 3.08e-70

Electron transfer flavoprotein-ubiquinone oxidoreductase, 4Fe-4S; Electron-transfer flavoprotein-ubiquinone oxidoreductase (ETF-QO) in the inner mitochondrial membrane accepts electrons from electron-transfer flavoprotein which is located in the mitochondrial matrix and reduces ubiquinone in the mitochondrial membrane. The two redox centres in the protein, FAD and a [4Fe4S] cluster, are present in a 64-kDa monomer.


Pssm-ID: 461576 [Multi-domain]  Cd Length: 104  Bit Score: 220.18  E-value: 3.08e-70
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1148540066 446 NKLSFDKLSSVFLSNTNHEEEQPCHLKLADSSIPISVNLAKYNEPAQRYCPAGVYEV--ESTAEGDKFVINSQNCVHCKT 523
Cdd:pfam05187   1 GVLTFDRLTSVYLSGTNHEEDQPCHLKLKDPEVPIKVNLPKYAGPEQRYCPAGVYEYveDEEPGGPRLQINAQNCVHCKT 80

                          90       100
                  ....*....|....*....|....
gi 1148540066 524 CDIKDPSQNITWVTPEGTGGPNYP 547
Cdd:pfam05187  81 CDIKDPTQNITWVVPEGGGGPNYP 104
FixX COG2440
Ferredoxin-like protein FixX [Energy production and conversion];
456-549 6.90e-47

Ferredoxin-like protein FixX [Energy production and conversion];


Pssm-ID: 441981 [Multi-domain]  Cd Length: 87  Bit Score: 158.44  E-value: 6.90e-47
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1148540066 456 VFLSNTNHEEEQPcHLKLADSSIPISVNLAKynePAQRYCPAGVYEVEstaEGDKFVINSQNCVHCKTCDIKDPSQNITW 535
Cdd:COG2440     1 LFLNNYNVDEDQP-HIKVKDPDICIARCLAK---PCTRYCPAGVYEIV---GDGRLQINYENCLECGTCRIKCPTQNITW 73

                          90
                  ....*....|....
gi 1148540066 536 VTPEGTGGPNYPNM 549
Cdd:COG2440    74 VYPEGGGGVNYRFG 87
PRK10015 PRK10015
oxidoreductase; Provisional
 7-393 7.03e-31

oxidoreductase; Provisional


Pssm-ID: 182194 [Multi-domain]  Cd Length: 429  Bit Score: 124.70  E-value: 7.03e-31
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1148540066   7 EFDVVIVGAGPAGlSTACQLMKLAQekeqeLMVCVVEKGSEVGAHILSGAVFEPRALNELFPDWKEKgAPLNTAVTGDDI 86
Cdd:PRK10015    5 KFDAIVVGAGVAG-SVAALVMARAG-----LDVLVIERGDSAGCKNMTGGRLYAHTLEAIIPGFAAS-APVERKVTREKI 77

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1148540066  87 YlFNGEESAVKLPGFGVPKTMHNEGNFIVSMGNVCRWLAEQAEQLGVEIFPGFPAqDIIYNDDGSVGGVITGDMGLDAeg 166
Cdd:PRK10015   78 S-FLTEESAVTLDFHREQPDVPQHASYTVLRNRLDPWLMEQAEQAGAQFIPGVRV-DALVREGNKVTGVQAGDDILEA-- 153

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1148540066 167 nqkdsfmpgmelkaKYTVFAEGCRGHLGKELiakfALDADKSPQHYGLGFKEIWDIDPAK--------HQEGLVVHSAGW 238
Cdd:PRK10015  154 --------------NVVILADGVNSMLGRSL----GMVPASDPHHYAVGVKEVIGLTPEQindrfnitGEEGAAWLFAGS 215

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1148540066 239 PlEKDTTGGGYLYhAENNQVFVGLIIDL-NYSNPHLSPFDEFQRYKHHPKIAQYLEGGKRVSYGARAMAKGGFNSLPKMT 317
Cdd:PRK10015  216 P-SDGLMGGGFLY-TNKDSISLGLVCGLgDIAHAQKSVPQMLEDFKQHPAIRPLISGGKLLEYSAHMVPEGGLAMVPQLV 293

                         330       340       350       360       370       380       390
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1148540066 318 MPGAVLVGCDAG-TINFA-KIKGNHTAMKSGMLAAESIFEALAAGDEGAKDLTSFTDKYRNSWLYDELYSTRNFgPAM 393
Cdd:PRK10015  294 NDGVMIVGDAAGfCLNLGfTVRGMDLAIASAQAAATTVIAAKERADFSASSLAQYKRELEQSCVMRDMQHFRKI-PAL 370
PRK10157 PRK10157
putative oxidoreductase FixC; Provisional
 8-381 9.66e-27

putative oxidoreductase FixC; Provisional


Pssm-ID: 182273 [Multi-domain]  Cd Length: 428  Bit Score: 112.70  E-value: 9.66e-27
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1148540066   8 FDVVIVGAGPAGLSTAcqlMKLAQEKEQelmVCVVEKGSEVGAHILSGAVFEPRALNELFPDWKEKgAPLNTAVTGDDIy 87
Cdd:PRK10157    6 FDAIIVGAGLAGSVAA---LVLAREGAQ---VLVIERGNSAGAKNVTGGRLYAHSLEHIIPGFADS-APVERLITHEKL- 77

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1148540066  88 LFNGEESAVKLPGFGVPKTMHNEGNFIVSMGNVCRWLAEQAEQLGVEIFPGFPAQDIIYNDDGSVGGVITGDMgldaegn 167
Cdd:PRK10157   78 AFMTEKSAMTMDYCNGDETSPSQRSYSVLRSKFDAWLMEQAEEAGAQLITGIRVDNLVQRDGKVVGVEADGDV------- 150

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1148540066 168 qkdsfmpgmeLKAKYTVFAEGCRGHLGKEL-IAKFAldadkSPQHYGLGFKEIWDIDPA--------KHQEGLVVHSAGW 238
Cdd:PRK10157  151 ----------IEAKTVILADGVNSILAEKLgMAKRV-----KPTDVAVGVKELIELPKSviedrfqlQGNQGAACLFAGS 215

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1148540066 239 PLEkDTTGGGYLYHAENNqVFVGLIIDLNY------SNPHLspfdeFQRYKHHPKIAQYLEGGKRVSYGARAMAKGGFNS 312
Cdd:PRK10157  216 PTD-GLMGGGFLYTNENT-LSLGLVCGLHHlhdakkSVPQM-----LEDFKQHPAVAPLIAGGKLVEYSAHVVPEAGINM 288

                         330       340       350       360       370       380       390
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1148540066 313 LPKMTMPGAVLVGCDAGT-INFA-KIKGNHTAMKSGMLAAESIFEALAAGDEGAKDLTSFTDKYRNSWLYD 381
Cdd:PRK10157  289 LPELVGDGVLIAGDAAGMcMNLGfTIRGMDLAIAAGEAAAKTVLSAMKSDDFSKQKLAEYRQHLESGPLRD 359
GG-red-SF TIGR02032
geranylgeranyl reductase family; This model represents a subfamily which includes ...
 8-353 1.01e-10

geranylgeranyl reductase family; This model represents a subfamily which includes geranylgeranyl reductases involved in chlorophyll and bacteriochlorophyll biosynthesis as well as other related enzymes which may also act on geranylgeranyl groups or related substrates. [Biosynthesis of cofactors, prosthetic groups, and carriers, Chlorophyll and bacteriochlorphyll]


Pssm-ID: 273936 [Multi-domain]  Cd Length: 295  Bit Score: 62.72  E-value: 1.01e-10
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1148540066   8 FDVVIVGAGPAGLSTACQLmklaqeKEQELMVCVVEKGSEVGAHILSGAVfePRALNELFPDWKEkgAPLNTAVTGdDIY 87
Cdd:TIGR02032   1 YDVVVVGAGPAGASAAYRL------ADKGLRVLLLEKKSFPRYKPCGGAL--SPRALEELDLPGE--LIVNLVRGA-RFF 69

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1148540066  88 LFNGEESAVKLPGFGVpktmhnegnFIVSMGNVCRWLAEQAEQLGVEIFPGFPAQDIIYNDDGSVGGVITGdmgldaegn 167
Cdd:TIGR02032  70 SPNGDSVEIPIETELA---------YVIDRDAFDEQLAERAQEAGAELRLGTRVLDVEIHDDRVVVIVRGS--------- 131

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1148540066 168 qkdsfmpGMELKAKYTVFAEGCRGHLGKeliakfALDADKSPQHYGLGFK-------EIWDIDPAKhqeglvVHsagwpL 240
Cdd:TIGR02032 132 -------EGTVTAKIVIGADGSRSIVAK------KLGLKKEPREYGVAARaevempdEEVDEDFVE------VY-----I 187

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1148540066 241 EKDTTGGGYLYH--AENNQVFVGLIIDLNYSNPHLSP-FDEF-QRYKhhpkiaqYLEGGKRVSYGARAMAKGGFNSlpKM 316
Cdd:TIGR02032 188 DRGIVPGGYGWVfpKGDGTANVGVGSRSAEEGEDPKKyLKDFlARRP-------ELKDAETVEVCGALIPIGRPDE--KL 258

                         330       340       350
                  ....*....|....*....|....*....|....*..
gi 1148540066 317 TMPGAVLVGCDAGTINFAKIKGNHTAMKSGMLAAESI 353
Cdd:TIGR02032 259 VRGNVLLVGDAAGHVNPLTGEGIYYAMRSGDIAAEVV 295
SdhA COG1053
Succinate dehydrogenase/fumarate reductase, flavoprotein subunit [Energy production and ...
 6-156 1.79e-10

Succinate dehydrogenase/fumarate reductase, flavoprotein subunit [Energy production and conversion]; Succinate dehydrogenase/fumarate reductase, flavoprotein subunit is part of the Pathway/BioSystem: TCA cycle


Pssm-ID: 440673 [Multi-domain]  Cd Length: 443  Bit Score: 62.93  E-value: 1.79e-10
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1148540066   6 MEFDVVIVGAGPAGLSTACQLmklaqeKEQELMVCVVEKGSEVGAH-ILSGAVFepRAlnelfpdwkeKGAPLNTAVTGD 84
Cdd:COG1053     2 HEYDVVVVGSGGAGLRAALEA------AEAGLKVLVLEKVPPRGGHtAAAQGGI--NA----------AGTNVQKAAGED 63

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1148540066  85 DIYLF----------NGEESAV---------------------------KLPGFG---VPKTMH---NEGNFIVsmgnvc 121
Cdd:COG1053    64 SPEEHfydtvkggdgLADQDLVealaeeapeaidwleaqgvpfsrtpdgRLPQFGghsVGRTCYagdGTGHALL------ 137

                         170       180       190
                  ....*....|....*....|....*....|....*
gi 1148540066 122 RWLAEQAEQLGVEIFPGFPAQDIIYnDDGSVGGVI 156
Cdd:COG1053   138 ATLYQAALRLGVEIFTETEVLDLIV-DDGRVVGVV 171
DAO pfam01266
FAD dependent oxidoreductase; This family includes various FAD dependent oxidoreductases: ...
 9-157 4.15e-10

FAD dependent oxidoreductase; This family includes various FAD dependent oxidoreductases: Glycerol-3-phosphate dehydrogenase EC:1.1.99.5, Sarcosine oxidase beta subunit EC:1.5.3.1, D-alanine oxidase EC:1.4.99.1, D-aspartate oxidase EC:1.4.3.1.


Pssm-ID: 426168 [Multi-domain]  Cd Length: 339  Bit Score: 61.26  E-value: 4.15e-10
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1148540066   9 DVVIVGAGPAGLSTACQLmklaqeKEQELMVCVVEKGSEVGAH-------ILSGAVFEP----------RALNELF---- 67
Cdd:pfam01266   1 DVVVIGGGIVGLSTAYEL------ARRGLSVTLLERGDDPGSGasgrnagLIHPGLRYLepselarlalEALDLWEelee 74

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1148540066  68 -----PDWKEKGApLNTAVT----------------GDDIYLFNGEESAVKLPGF-GVPKTMHNEGNFIVSMGNVCRWLA 125
Cdd:pfam01266  75 elgidCGFRRCGV-LVLARDeeeealekllaalrrlGVPAELLDAEELRELEPLLpGLRGGLFYPDGGHVDPARLLRALA 153

                         170       180       190
                  ....*....|....*....|....*....|..
gi 1148540066 126 EQAEQLGVEIFPGFPAQDIiyNDDGSVGGVIT 157
Cdd:pfam01266 154 RAAEALGVRIIEGTEVTGI--EEEGGVWGVVT 183
UbiH COG0654
2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases [Coenzyme ...
 5-159 5.37e-10

2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases [Coenzyme transport and metabolism, Energy production and conversion]; 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases is part of the Pathway/BioSystem: Ubiquinone biosynthesis


Pssm-ID: 440419 [Multi-domain]  Cd Length: 326  Bit Score: 61.11  E-value: 5.37e-10
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1148540066   5 SMEFDVVIVGAGPAGLSTACQLMKLAQEkeqelmVCVVEKGSEVGAHIlSGAVFEPRALNEL-----FPDWKEKGAPLnt 79
Cdd:COG0654     1 MMRTDVLIVGGGPAGLALALALARAGIR------VTVVERAPPPRPDG-RGIALSPRSLELLrrlglWDRLLARGAPI-- 71

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1148540066  80 avtgDDIYLFNGEESAVkLPGFGVPKTMHNEGnFIVSMGNVCRWLAEQAEQLGVEIFPGFPAQDIIYNDDGSV-----GG 154
Cdd:COG0654    72 ----RGIRVRDGSDGRV-LARFDAAETGLPAG-LVVPRADLERALLEAARALGVELRFGTEVTGLEQDADGVTvtladGR 145


                  ....*
gi 1148540066 155 VITGD 159
Cdd:COG0654   146 TLRAD 150
DadA COG0665
Glycine/D-amino acid oxidase (deaminating) [Amino acid transport and metabolism];
6-159 6.45e-10

Glycine/D-amino acid oxidase (deaminating) [Amino acid transport and metabolism];


Pssm-ID: 440429 [Multi-domain]  Cd Length: 364  Bit Score: 61.07  E-value: 6.45e-10
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1148540066   6 MEFDVVIVGAGPAGLSTACQLmklaqeKEQELMVCVVEKGsEVGAH-------ILSGAVFEP--RALNELF--------- 67
Cdd:COG0665     1 ATADVVVIGGGIAGLSTAYHL------ARRGLDVTVLERG-RPGSGasgrnagQLRPGLAALadRALVRLArealdlwre 73

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1148540066  68 --------PDWKEKGApLNTAVT-----------------GDDIYLFNGEESAVKLPGFGVPKT---MHNEGNFIVSMGN 119
Cdd:COG0665    74 laaelgidCDFRRTGV-LYLARTeaelaalraeaealralGLPVELLDAAELREREPGLGSPDYaggLYDPDDGHVDPAK 152

                         170       180       190       200
                  ....*....|....*....|....*....|....*....|
gi 1148540066 120 VCRWLAEQAEQLGVEIFPGFPAQDIIYNDDGsVGGVITGD 159
Cdd:COG0665   153 LVRALARAARAAGVRIREGTPVTGLEREGGR-VTGVRTER 191
LhgO COG0579
L-2-hydroxyglutarate oxidase LhgO [Carbohydrate transport and metabolism];
4-159 1.46e-08

L-2-hydroxyglutarate oxidase LhgO [Carbohydrate transport and metabolism];


Pssm-ID: 440344 [Multi-domain]  Cd Length: 418  Bit Score: 57.08  E-value: 1.46e-08
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1148540066   4 ESMEFDVVIVGAGPAGLSTACQLMKLAQEKeqelmVCVVEKGSEVGAH-------ILSGAVFEP---------RALNELF 67
Cdd:COG0579     1 MMEMYDVVIIGAGIVGLALARELSRYEDLK-----VLVLEKEDDVAQEssgnnsgVIHAGLYYTpgslkarlcVEGNELF 75

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1148540066  68 PDW-KEKGAPLN-----TAVTGD-------------------DIYLFNGEE--------SAVKLPGFGVPKTmhnegnFI 114
Cdd:COG0579    76 YELcRELGIPFKrcgklVVATGEeevafleklyergkangvpGLEILDREElrelepllSDEGVAALYSPST------GI 149

                         170       180       190       200
                  ....*....|....*....|....*....|....*....|....*
gi 1148540066 115 VSMGNVCRWLAEQAEQLGVEIFPGFPAQDIIYNDDGSVggVITGD 159
Cdd:COG0579   150 VDPGALTRALAENAEANGVELLLNTEVTGIEREGDGWE--VTTNG 192
FAD_binding_2 pfam00890
FAD binding domain; This family includes members that bind FAD. This family includes the ...
 9-215 5.55e-07

FAD binding domain; This family includes members that bind FAD. This family includes the flavoprotein subunits from succinate and fumarate dehydrogenase, aspartate oxidase and the alpha subunit of adenylylsulphate reductase.


Pssm-ID: 395718 [Multi-domain]  Cd Length: 398  Bit Score: 51.90  E-value: 5.55e-07
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1148540066   9 DVVIVGAGPAGLSTACQLmklaqeKEQELMVCVVEKGSEVGAHIL--SGAVFEPRALNELFPDWKEKgAPLNTAVTGD-- 84
Cdd:pfam00890   1 DVLVIGGGLAGLAAALAA------AEAGLKVAVVEKGQPFGGATAwsSGGIDALGNPPQGGIDSPEL-HPTDTLKGLDel 73

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1148540066  85 ------DIYLFNGEESAVKLPGFGVP--KTMHNE---------------------GNFIVSMGN-VCRWLAEQAEQLGVE 134
Cdd:pfam00890  74 adhpyvEAFVEAAPEAVDWLEALGVPfsRTEDGHldlrplgglsatwrtphdaadRRRGLGTGHaLLARLLEGLRKAGVD 153

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1148540066 135 IFPGFPAQDIIYNDDGSVGGVITgdmgLDAEGNQKdsfmpgmELKAKY-TVFAEGCRGHLgKELIAKFALDADKSPQHYG 213
Cdd:pfam00890 154 FQPRTAADDLIVEDGRVTGAVVE----NRRNGREV-------RIRAIAaVLLATGGFGRL-AELLLPAAGYADTTNPPAN 221


                  ..
gi 1148540066 214 LG 215
Cdd:pfam00890 222 TG 223
Thi4 pfam01946
Thi4 family; This family includes Swiss:P32318 a putative thiamine biosynthetic enzyme.
 6-157 1.53e-06

Thi4 family; This family includes Swiss:P32318 a putative thiamine biosynthetic enzyme.


Pssm-ID: 460393  Cd Length: 232  Bit Score: 49.39  E-value: 1.53e-06
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1148540066   6 MEFDVVIVGAGPAGLSTACQLmklaqEKEQELMVCVVEKGSEVGAHILSGAvfepralnELFPdwkekgaplntavtgdd 85
Cdd:pfam01946  16 AESDVVIVGAGSSGLTAAYYL-----AKNRGLKVAIIERSVSPGGGAWLGG--------QLFS----------------- 65

                          90       100       110       120       130       140       150
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1148540066  86 iYLFNGEESAVKLPGFGVPKTMHNEGNFIVSMGNVCRWLAEQAEQL-GVEIFPGFPAQDIIYNDDGSVGGVIT 157
Cdd:pfam01946  66 -AMVVRKPAHLFLDEFGIPYEDEGDYVVVKHAALFTSTLMSKALQLpNVKLFNATSVEDLIVRPGVGVAGVVT 137
CzcO COG2072
Predicted flavoprotein CzcO associated with the cation diffusion facilitator CzcD [Inorganic ...
 5-49 1.64e-06

Predicted flavoprotein CzcO associated with the cation diffusion facilitator CzcD [Inorganic ion transport and metabolism];


Pssm-ID: 441675 [Multi-domain]  Cd Length: 414  Bit Score: 50.63  E-value: 1.64e-06
                          10        20        30        40
                  ....*....|....*....|....*....|....*....|....*
gi 1148540066   5 SMEFDVVIVGAGPAGLSTACQLmklaqeKEQELMVCVVEKGSEVG 49
Cdd:COG2072     4 TEHVDVVVIGAGQAGLAAAYHL------RRAGIDFVVLEKADDVG 42
PRK08244 PRK08244
monooxygenase;
6-190 2.61e-06

monooxygenase;


Pssm-ID: 236199 [Multi-domain]  Cd Length: 493  Bit Score: 50.13  E-value: 2.61e-06
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1148540066   6 MEFDVVIVGAGPAGLSTACQLmKLAQEKeqelmVCVVEKGSE-------VGAHILSGAVFEPRALNELFpdwKEKGAPLN 78
Cdd:PRK08244    1 MKYEVIIIGGGPVGLMLASEL-ALAGVK-----TCVIERLKEtvpyskaLTLHPRTLEILDMRGLLERF---LEKGRKLP 71

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1148540066  79 TavtgddiylfnGEESAVKLP-GFGVPKTMHNEGNFIvSMGNVCRWLAEQAEQLGVEIFPGFPAQDIIYNDDGsVGGVIT 157
Cdd:PRK08244   72 S-----------GHFAGLDTRlDFSALDTSSNYTLFL-PQAETEKVLEEHARSLGVEIFRGAEVLAVRQDGDG-VEVVVR 138

                         170       180       190
                  ....*....|....*....|....*....|...
gi 1148540066 158 GDMGLDAegnqkdsfmpgmeLKAKYTVFAEGCR 190
Cdd:PRK08244  139 GPDGLRT-------------LTSSYVVGADGAG 158
COG1233 COG1233
Phytoene dehydrogenase-related protein [Secondary metabolites biosynthesis, transport and ...
 6-49 1.75e-05

Phytoene dehydrogenase-related protein [Secondary metabolites biosynthesis, transport and catabolism];


Pssm-ID: 440846 [Multi-domain]  Cd Length: 491  Bit Score: 47.54  E-value: 1.75e-05
                          10        20        30        40
                  ....*....|....*....|....*....|....*....|....*
gi 1148540066   6 MEFDVVIVGAGPAGLSTACQlmkLAQE-KEqelmVCVVEKGSEVG 49
Cdd:COG1233     2 MMYDVVVIGAGIGGLAAAAL---LARAgYR----VTVLEKNDTPG 39
FAD_binding_3 pfam01494
FAD binding domain; This domain is involved in FAD binding in a number of enzymes.
 7-197 2.21e-05

FAD binding domain; This domain is involved in FAD binding in a number of enzymes.


Pssm-ID: 396193 [Multi-domain]  Cd Length: 348  Bit Score: 46.55  E-value: 2.21e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1148540066   7 EFDVVIVGAGPAGLSTACQLMKLAQEkeqelmVCVVEKGSEvgAHILS-GAVFEPRALnELFPD------WKEKGAPLNT 79
Cdd:pfam01494   1 ETDVLIVGGGPAGLMLALLLARAGVR------VVLVERHAT--TSVLPrAHGLNQRTM-ELLRQagledrILAEGVPHEG 71

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1148540066  80 avTGDdiyLFNGEESAVKLPGFGVPKTMHnegNFIVSMgnVCRWLAEQAEQLGVEIFPGFPAQDIIYNDDGsVGGVITGd 159
Cdd:pfam01494  72 --MGL---AFYNTRRRADLDFLTSPPRVT---VYPQTE--LEPILVEHAEARGAQVRFGTEVLSLEQDGDG-VTAVVRD- 139

                         170       180       190
                  ....*....|....*....|....*....|....*...
gi 1148540066 160 mGLDAEGNqkdsfmpgmELKAKYTVFAEGCRGHLGKEL 197
Cdd:pfam01494 140 -RRDGEEY---------TVRAKYLVGCDGGRSPVRKTL 167
PRK07208 PRK07208
hypothetical protein; Provisional
 9-49 1.04e-04

hypothetical protein; Provisional


Pssm-ID: 235967 [Multi-domain]  Cd Length: 479  Bit Score: 44.88  E-value: 1.04e-04
                          10        20        30        40
                  ....*....|....*....|....*....|....*....|.
gi 1148540066   9 DVVIVGAGPAGLSTACQLMKlaqekeQELMVCVVEKGSEVG 49
Cdd:PRK07208    6 SVVIIGAGPAGLTAAYELLK------RGYPVTVLEADPVVG 40
COG2509 COG2509
FAD-dependent dehydrogenase [General function prediction only];
5-48 1.26e-04

FAD-dependent dehydrogenase [General function prediction only];


Pssm-ID: 441999 [Multi-domain]  Cd Length: 466  Bit Score: 44.72  E-value: 1.26e-04
                          10        20        30        40
                  ....*....|....*....|....*....|....*....|....
gi 1148540066   5 SMEFDVVIVGAGPAGLSTAcqlMKLAqekEQELMVCVVEKGSEV 48
Cdd:COG2509    28 SLKYDVVIVGAGPAGLFAA---LELA---EAGLKPLVLERGKDV 65
PRK09126 PRK09126
FAD-dependent hydroxylase;
5-47 1.84e-04

FAD-dependent hydroxylase;


Pssm-ID: 236385 [Multi-domain]  Cd Length: 392  Bit Score: 43.78  E-value: 1.84e-04
                          10        20        30        40
                  ....*....|....*....|....*....|....*....|...
gi 1148540066   5 SMEFDVVIVGAGPAGLSTACQLMKLAqekeqeLMVCVVEKGSE 47
Cdd:PRK09126    1 MMHSDIVVVGAGPAGLSFARSLAGSG------LKVTLIERQPL 37
HemY COG1232
Protoporphyrinogen oxidase HemY/PPOX [Coenzyme transport and metabolism]; Protoporphyrinogen ...
 9-49 2.36e-04

Protoporphyrinogen oxidase HemY/PPOX [Coenzyme transport and metabolism]; Protoporphyrinogen oxidase HemY/PPOX is part of the Pathway/BioSystem: Heme biosynthesis


Pssm-ID: 440845 [Multi-domain]  Cd Length: 443  Bit Score: 43.67  E-value: 2.36e-04
                          10        20        30        40
                  ....*....|....*....|....*....|....*....|.
gi 1148540066   9 DVVIVGAGPAGLSTACQLMKLAQEkeqelmVCVVEKGSEVG 49
Cdd:COG1232     3 RVAVIGGGIAGLTAAYRLAKAGHE------VTVLEASDRVG 37
YdhS COG4529
Uncharacterized NAD(P)/FAD-binding protein YdhS [General function prediction only];
1-50 2.63e-04

Uncharacterized NAD(P)/FAD-binding protein YdhS [General function prediction only];


Pssm-ID: 443597 [Multi-domain]  Cd Length: 466  Bit Score: 43.79  E-value: 2.63e-04
                          10        20        30        40        50
                  ....*....|....*....|....*....|....*....|....*....|
gi 1148540066   1 MERESMefDVVIVGAGPAGLSTACQLMKLAQEKEQelmVCVVEKGSEVGA 50
Cdd:COG4529     1 MTGARK--RIAIIGGGASGTALAIHLLRRAPEPLR---ITLFEPRPELGR 45
YobN COG1231
Monoamine oxidase [Amino acid transport and metabolism];
1-60 3.33e-04

Monoamine oxidase [Amino acid transport and metabolism];


Pssm-ID: 440844 [Multi-domain]  Cd Length: 440  Bit Score: 43.37  E-value: 3.33e-04
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1148540066   1 MERESMEFDVVIVGAGPAGLSTACQLMKLAQEkeqelmVCVVEKGSEVGAHILS------GAVFEP 60
Cdd:COG1231     1 MSRRARGKDVVIVGAGLAGLAAARELRKAGLD------VTVLEARDRVGGRVWTlrfgddGLYAEL 60
COG3380 COG3380
Predicted NAD/FAD-dependent oxidoreductase [General function prediction only];
6-49 7.04e-04

Predicted NAD/FAD-dependent oxidoreductase [General function prediction only];


Pssm-ID: 442607 [Multi-domain]  Cd Length: 331  Bit Score: 41.79  E-value: 7.04e-04
                          10        20        30        40
                  ....*....|....*....|....*....|....*....|....
gi 1148540066   6 MEFDVVIVGAGPAGLSTACQLMKLAQEkeqelmVCVVEKGSEVG 49
Cdd:COG3380     2 SMPDIAIIGAGIAGLAAARALQDAGHE------VTVFEKSRGVG 39
NAD_binding_8 pfam13450
NAD(P)-binding Rossmann-like domain;
12-57 1.02e-03

NAD(P)-binding Rossmann-like domain;


Pssm-ID: 433218 [Multi-domain]  Cd Length: 67  Bit Score: 37.51  E-value: 1.02e-03
                          10        20        30        40
                  ....*....|....*....|....*....|....*....|....*.
gi 1148540066  12 IVGAGPAGLSTACQLmklaqeKEQELMVCVVEKGSEVGAHILSGAV 57
Cdd:pfam13450   1 IVGAGLAGLVAAALL------AKRGFRVLVLEKRDRLGGNAYSYRV 40
PRK11728 PRK11728
L-2-hydroxyglutarate oxidase;
6-51 1.15e-03

L-2-hydroxyglutarate oxidase;


Pssm-ID: 183292 [Multi-domain]  Cd Length: 393  Bit Score: 41.35  E-value: 1.15e-03
                          10        20        30        40
                  ....*....|....*....|....*....|....*....|....*.
gi 1148540066   6 MEFDVVIVGAGPAGLSTACQLmklaQEKEQELMVCVVEKGSEVGAH 51
Cdd:PRK11728    1 AMYDFVIIGGGIVGLSTAMQL----QERYPGARIAVLEKESGPARH 42
PRK05249 PRK05249
Si-specific NAD(P)(+) transhydrogenase;
4-49 1.22e-03

Si-specific NAD(P)(+) transhydrogenase;


Pssm-ID: 235373 [Multi-domain]  Cd Length: 461  Bit Score: 41.30  E-value: 1.22e-03
                          10        20        30        40
                  ....*....|....*....|....*....|....*....|....*.
gi 1148540066   4 ESMEFDVVIVGAGPAGLSTACQLMKLAQEkeqelmVCVVEKGSEVG 49
Cdd:PRK05249    2 HMYDYDLVVIGSGPAGEGAAMQAAKLGKR------VAVIERYRNVG 41
HI0933_like pfam03486
HI0933-like protein;
8-188 1.30e-03

HI0933-like protein;


Pssm-ID: 427330 [Multi-domain]  Cd Length: 406  Bit Score: 41.41  E-value: 1.30e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1148540066   8 FDVVIVGAGPAGLSTAcqlmklAQEKEQELMVCVVEKGSEVG--------------------AHILSGAVFEPRAL---- 63
Cdd:pfam03486   1 FDVIVIGGGAAGLMAA------ISAAKRGRRVLLIEKGKKLGrkilisgggrcnvtnlseepDNFLSRYPGNPKFLksal 74

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1148540066  64 ----NELFPDWKEK-GAPLNtavTGDDIYLFngeesavklpgfgvPKTMHNEGnfIVSMgnvcrWLAEqAEQLGVEIFPG 138
Cdd:pfam03486  75 srftPWDFIAFFESlGVPLK---EEDHGRLF--------------PDSDKASD--IVDA-----LLNE-LKELGVKIRLR 129

                         170       180       190       200       210
                  ....*....|....*....|....*....|....*....|....*....|
gi 1148540066 139 FPAQDIIYNDDGSVgGVITGdmgldaegnqkdsfmpGMELKAKYTVFAEG 188
Cdd:pfam03486 130 TRVLSVEKDDDGRF-RVKTG----------------GEELEADSLVLATG 162
PRK06996 PRK06996
UbiH/UbiF/VisC/COQ6 family ubiquinone biosynthesis hydroxylase;
7-192 1.40e-03

UbiH/UbiF/VisC/COQ6 family ubiquinone biosynthesis hydroxylase;


Pssm-ID: 235905 [Multi-domain]  Cd Length: 398  Bit Score: 41.21  E-value: 1.40e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1148540066   7 EFDVVIVGAGPAGLSTACQLMKLAQEKEQELMVcvvekgseVGAHILSGAVFEPRALN---------ELFPDWKEKGAPL 77
Cdd:PRK06996   11 DFDIAIVGAGPVGLALAGWLARRSATRALSIAL--------IDAREPAASANDPRAIAlshgsrvllETLGAWPADATPI 82

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1148540066  78 ------------NTAVTGDDiylfngeesavklpgFGVPKTMHnegnfIVSMGNVCRWLAEQAEQLGVEIFPGFPAQDii 145
Cdd:PRK06996   83 ehihvsqrghfgRTLIDRDD---------------HDVPALGY-----VVRYGSLVAALARAVRGTPVRWLTSTTAHA-- 140

                         170       180       190       200
                  ....*....|....*....|....*....|....*....|....*..
gi 1148540066 146 ynDDGSVGGVITGDMGLDAEGnqkdsfmpgmELKAKYTVFAEGCRGH 192
Cdd:PRK06996  141 --PAQDADGVTLALGTPQGAR----------TLRARIAVQAEGGLFH 175
Lpd COG1249
Dihydrolipoamide dehydrogenase (E3) component of pyruvate/2-oxoglutarate dehydrogenase complex ...
 5-45 1.85e-03

Dihydrolipoamide dehydrogenase (E3) component of pyruvate/2-oxoglutarate dehydrogenase complex or glutathione oxidoreductase [Energy production and conversion]; Dihydrolipoamide dehydrogenase (E3) component of pyruvate/2-oxoglutarate dehydrogenase complex or glutathione oxidoreductase is part of the Pathway/BioSystem: Glycine cleavagePyruvate oxidation


Pssm-ID: 440861 [Multi-domain]  Cd Length: 456  Bit Score: 40.84  E-value: 1.85e-03
                          10        20        30        40
                  ....*....|....*....|....*....|....*....|.
gi 1148540066   5 SMEFDVVIVGAGPAGLSTAcqlMKLAQEKEQelmVCVVEKG 45
Cdd:COG1249     1 MKDYDLVVIGAGPGGYVAA---IRAAQLGLK---VALVEKG 35
TrxB COG0492
Thioredoxin reductase [Posttranslational modification, protein turnover, chaperones];
8-23 2.36e-03

Thioredoxin reductase [Posttranslational modification, protein turnover, chaperones];


Pssm-ID: 440258 [Multi-domain]  Cd Length: 305  Bit Score: 40.10  E-value: 2.36e-03
                          10
                  ....*....|....*.
gi 1148540066   8 FDVVIVGAGPAGLSTA 23
Cdd:COG0492     1 YDVVIIGAGPAGLTAA 16
COG3573 COG3573
Predicted oxidoreductase [General function prediction only];
6-37 3.16e-03

Predicted oxidoreductase [General function prediction only];


Pssm-ID: 442794 [Multi-domain]  Cd Length: 551  Bit Score: 40.16  E-value: 3.16e-03
                          10        20        30
                  ....*....|....*....|....*....|....*....
gi 1148540066   6 MEFDVVIVGAGPAGLSTACQLMK-------LAQEKEQEL 37
Cdd:COG3573     4 MDADVIVVGAGLAGLVAAAELADagrrvllLDQEPEANL 42
NadB COG0029
Aspartate oxidase [Coenzyme transport and metabolism]; Aspartate oxidase is part of the ...
 4-46 3.49e-03

Aspartate oxidase [Coenzyme transport and metabolism]; Aspartate oxidase is part of the Pathway/BioSystem: NAD biosynthesis


Pssm-ID: 439800 [Multi-domain]  Cd Length: 521  Bit Score: 40.09  E-value: 3.49e-03
                          10        20        30        40
                  ....*....|....*....|....*....|....*....|...
gi 1148540066   4 ESMEFDVVIVGAGPAGLSTAcqlMKLAQEKEqelmVCVVEKGS 46
Cdd:COG0029     1 ERLKTDVLVIGSGIAGLSAA---LKLAERGR----VTLLTKGE 36
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
Help | Disclaimer | Write to the Help Desk
NCBI | NLM | NIH