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Conserved domains on  [gi|1153953867|ref|WP_078438570|]
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MULTISPECIES: GABA permease [Bacillus]

Protein Classification

amino acid permease( domain architecture ID 11438095)

amino acid permease facilitates the transport of amino acids; similar to Mycobacterium tuberculosis L-asparagine permease

Gene Ontology:  GO:0055085|GO:0006865|GO:0016020|GO:0015171
PubMed:  10931886|24038584|25043943
TCDB:  2.A.3.1

Graphical summary

 Zoom to residue level

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List of domain hits

 Name Accession Description Interval E-value
AnsP COG1113
L-asparagine transporter or related permease [Amino acid transport and metabolism];
2-448 0e+00

L-asparagine transporter or related permease [Amino acid transport and metabolism];


:

Pssm-ID: 440730 [Multi-domain]  Cd Length: 458  Bit Score: 574.76  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1153953867   2 DKNLKKDLKIRHITMISIGGVIGAGLFVGSGAVVHSAGPGSIISYALAGLLVVFVMRMLGEMAAINPTSGSFATYAREAI 81
Cdd:COG1113    10 EEGLKRGLKNRHIQMIALGGAIGTGLFLGSGKAIALAGPAVLLSYLIAGLIVFLVMRALGEMAVANPVSGSFSDYAREYL 89

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1153953867  82 GPWAGYTIGWLYWFFWVIVIAIEATAGAGIIQYWIPEIPLWLLSLILTILLTLTNVFSVKSFGEFEYWFSFIKVISIVLF 161
Cdd:COG1113    90 GPWAGFVTGWLYWFFWVLVGMAEATAVGIYLQFWFPDVPQWVWALVFLVLLTAINLLSVKLFGEFEFWFALIKVVAIVAF 169

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1153953867 162 LCLGLAVIL-GF-VPGTEAPGTSNLVGQGGFMPNGISSVLLGITVVIFSFMGSEIVAVAAGESAEPVKAVKTATNSVIWR 239
Cdd:COG1113   170 IVVGLLLIFfGFgLPGGPPAGLSNLWDHGGFFPNGIGGVLAALQIVVFAFGGIELVGIAAAEAKDPEKTIPKAINSVIWR 249

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1153953867 240 ILVFFIGSIAVVVTLLPWNSANILKSPFVAVLEHIGIPAAAQIMNFIVLTAVLSCLNSGLYTNSRMLFSMAERGDAPKAF 319
Cdd:COG1113   250 ILLFYVGSLFVILALVPWNQIGAGGSPFVTVFSLLGIPAAAGIMNFVVLTAALSSLNSGLYSTSRMLYSLAERGDAPKFF 329

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1153953867 320 LKLNSSGVPVRAVLFGTFFAYIGVVFSYISPDKVFLFLVNASGGIALLVYLVIAISHLKIRKKMGRVEQQNLKVKMWFFP 399
Cdd:COG1113   330 GKLSKRGVPVRAILLSAVVLLIGVVLNYLLPEKAFTFLLSISGFGALFVWLMILVSQLKFRRRLPREGAAALKFKMPGFP 409

                         410       420       430       440
                  ....*....|....*....|....*....|....*....|....*....
gi 1153953867 400 YVTYVTIAAIIAVLIAMLAIESLRSQALLTMLVTVLIIISYFIFNRNKN 448
Cdd:COG1113   410 YTSYLTLAFLAAVLVLMAFDPDTRIALIVGPVWLALLVVGYFLVRRRRA 458
 
Name Accession Description Interval E-value
AnsP COG1113
L-asparagine transporter or related permease [Amino acid transport and metabolism];
2-448 0e+00

L-asparagine transporter or related permease [Amino acid transport and metabolism];


Pssm-ID: 440730 [Multi-domain]  Cd Length: 458  Bit Score: 574.76  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1153953867   2 DKNLKKDLKIRHITMISIGGVIGAGLFVGSGAVVHSAGPGSIISYALAGLLVVFVMRMLGEMAAINPTSGSFATYAREAI 81
Cdd:COG1113    10 EEGLKRGLKNRHIQMIALGGAIGTGLFLGSGKAIALAGPAVLLSYLIAGLIVFLVMRALGEMAVANPVSGSFSDYAREYL 89

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1153953867  82 GPWAGYTIGWLYWFFWVIVIAIEATAGAGIIQYWIPEIPLWLLSLILTILLTLTNVFSVKSFGEFEYWFSFIKVISIVLF 161
Cdd:COG1113    90 GPWAGFVTGWLYWFFWVLVGMAEATAVGIYLQFWFPDVPQWVWALVFLVLLTAINLLSVKLFGEFEFWFALIKVVAIVAF 169

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1153953867 162 LCLGLAVIL-GF-VPGTEAPGTSNLVGQGGFMPNGISSVLLGITVVIFSFMGSEIVAVAAGESAEPVKAVKTATNSVIWR 239
Cdd:COG1113   170 IVVGLLLIFfGFgLPGGPPAGLSNLWDHGGFFPNGIGGVLAALQIVVFAFGGIELVGIAAAEAKDPEKTIPKAINSVIWR 249

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1153953867 240 ILVFFIGSIAVVVTLLPWNSANILKSPFVAVLEHIGIPAAAQIMNFIVLTAVLSCLNSGLYTNSRMLFSMAERGDAPKAF 319
Cdd:COG1113   250 ILLFYVGSLFVILALVPWNQIGAGGSPFVTVFSLLGIPAAAGIMNFVVLTAALSSLNSGLYSTSRMLYSLAERGDAPKFF 329

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1153953867 320 LKLNSSGVPVRAVLFGTFFAYIGVVFSYISPDKVFLFLVNASGGIALLVYLVIAISHLKIRKKMGRVEQQNLKVKMWFFP 399
Cdd:COG1113   330 GKLSKRGVPVRAILLSAVVLLIGVVLNYLLPEKAFTFLLSISGFGALFVWLMILVSQLKFRRRLPREGAAALKFKMPGFP 409

                         410       420       430       440
                  ....*....|....*....|....*....|....*....|....*....
gi 1153953867 400 YVTYVTIAAIIAVLIAMLAIESLRSQALLTMLVTVLIIISYFIFNRNKN 448
Cdd:COG1113   410 YTSYLTLAFLAAVLVLMAFDPDTRIALIVGPVWLALLVVGYFLVRRRRA 458
GABAperm TIGR01773
gamma-aminobutyrate permease; GABA permease (gabP) catalyzes the translocation of ...
 5-447 0e+00

gamma-aminobutyrate permease; GABA permease (gabP) catalyzes the translocation of 4-aminobutyrate (GABA) across the plasma membrane, with homologues expressed in Gram-negative and Gram-positive organisms. This permease is a highly hydrophobic transmembrane protein consisting of 12 transmembrane domains with hydrophilic N- and C-terminal ends. Induced by nitrogen-limited culture conditions in both Escherichia coli and Bacillus subtilis, gabP is an energy dependent transport system stimulated by membrane potential and has been observed adjacent and distant from other GABA degradation proteins. GabP is highly homologous to amino acid permeases from B. subtilis, E. coli, as well as to other members of the amino acid permease family (pfam00324). A member of the APC (amine-polyamine-choline) transporter superfamily, GABA permease possesses a "consensus amphiphatic region" (CAR) found to be evolutionarily conserved within this transport family. This amphiphatic region is located between helix 8 and cytoplasmic loop 8-9, forming a potential channel domain and suggested to play a significant role in ligand recognition and translocation. Unique to GABA permeases, a conserved cysteine residue (CYS-300, E.coli) located at the beginning of the amphiphatic domain, has been determined to be critical for catalytic specificity. [Transport and binding proteins, Amino acids, peptides and amines]


Pssm-ID: 273797  Cd Length: 452  Bit Score: 529.83  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1153953867   5 LKKDLKIRHITMISIGGVIGAGLFVGSGAVVHSAGPGSIISYALAGLLVVFVMRMLGEMAAINPTSGSFATYAREAIGPW 84
Cdd:TIGR01773  10 LPNGLKTRHVTMLSIAGVIGAGLFVGSGSAIASAGPAALLAYLLAGLLVVFIMRMLGEMAVANPDTGSFSTYADDAIGRW 89

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1153953867  85 AGYTIGWLYWFFWVIVIAIEATAGAGIIQYWIPEIPLWLLSLILTILLTLTNVFSVKSFGEFEYWFSFIKVISIVLFLCL 164
Cdd:TIGR01773  90 AGFTIGWLYWWFWVLVIPLEAIAAAGILQYWFPDIPLWLFSLILTIVLTLTNLYSVKSYGEFEFWFALIKVIAIIAFIIL 169

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1153953867 165 GLAVILGFVPGTEAPGTSNLVGQGGFMPNGISSVLLGITVVIFSFMGSEIVAVAAGESAEPVKAVKTATNSVIWRILVFF 244
Cdd:TIGR01773 170 GAVAIFGFAPGSEVSGFSNLTGKGGFFPNGIGAVLLAILVTMFSFMGTEIVTIAAAESSNPIKSITRATNSVIWRIIVFY 249

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1153953867 245 IGSIAVVVTLLPWNSANILKS-PFVAVLEHIGIPAAAQIMNFIVLTAVLSCLNSGLYTNSRMLFSMAERGDAPKAFLKLN 323
Cdd:TIGR01773 250 LGSIFIVVALLPWNSPNLLEVgSYVAVLELLGIPHAKLIMDFVVLTAVLSCLNSALYTTSRMLYSLAERGDAPRVFMKLN 329

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1153953867 324 SSGVPVRAVLFGTFFAYIGVVFSYISPDKVFLFLVNASGGIALLVYLVIAISHLKIRKKMgRVEQQNLKVKMWFFPYVTY 403
Cdd:TIGR01773 330 KKGVPVQAVLASTFFSFLTVVVNYFAPDKVFLFLVNSSGAIALLVYLVIAVSQLRMRKKL-KANGEAIKIRMWLYPWLTW 408

                         410       420       430       440
                  ....*....|....*....|....*....|....*....|....
gi 1153953867 404 VTIAAIIAVLIAMLAIESLRSQALLTMLVTVLIIISYFIFNRNK 447
Cdd:TIGR01773 409 LVIIFICGILVSMLFIPSMRDEVLLTGLLTIIVLCSYLVFARRK 452
PRK10197 PRK10197
GABA permease;
16-447 2.45e-117

GABA permease;


Pssm-ID: 182297  Cd Length: 446  Bit Score: 351.23  E-value: 2.45e-117
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1153953867  16 MISIGGVIGAGLFVGSGAVVHSAGPGSIISYALAGLLVVFVMRMLGEMAAINPTSGSFATYAREAIGPWAGYTIGWLYWF 95
Cdd:PRK10197    1 MLSIAGVIGASLFVGSSVAIAEAGPAVLLAYLFAGLLVVMIMRMLAEMAVATPDTGSFSTYADKAIGRWAGYTIGWLYWW 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1153953867  96 FWVIVIAIEATAGAGIIQYWIPEIPLWLLSLILTILLTLTNVFSVKSFGEFEYWFSFIKVISIVLFLCLGLAVILGFVPG 175
Cdd:PRK10197   81 FWVLVIPLEANIAAMILHSWVPGIPIWLFSLVITLALTGSNLLSVKNYGEFEFWLALCKVIAILAFIFLGAVAISGFYPY 160

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1153953867 176 TEAPGTSNLVGQGGFMPNGISSVLLGITVVIFSFMGSEIVAVAAGESAEPVKAVKTATNSVIWRILVFFIGSIAVVVTLL 255
Cdd:PRK10197  161 AEVSGISRLWDSGGFMPNGFGAVLSAMLITMFSFMGAEIVTIAAAESDTPEKHIVRATNSVIWRISIFYLCSIFVVVALI 240

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1153953867 256 PWNSANILK-SPFVAVLEHIGIPAAAQIMNFIVLTAVLSCLNSGLYTNSRMLFSMAERGDAPKAFLKLNSSGVPVRAVLF 334
Cdd:PRK10197  241 PWNMPGLKAvGSYRSVLELLNIPHAKLIMDCVILLSVTSCLNSALYTASRMLYSLSRRGDAPAVMGKINRSKTPYVAVLL 320

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1153953867 335 GTFFAYIGVVFSYISPDKVFLFLVNASGGIALLVYLVIAISHLKIRKKMgRVEQQNLKVKMWFFPYVTYVTIAAIIAVLI 414
Cdd:PRK10197  321 STGAAFLTVVVNYYAPAKVFKFLIDSSGAIALLVYLVIAVSQLRMRKIL-RAEGSEIRLRMWLYPWLTWLVIGFITFVLV 399

                         410       420       430
                  ....*....|....*....|....*....|...
gi 1153953867 415 AMLAIESLRSQALLTMLVTVLIIISYFIFNRNK 447
Cdd:PRK10197  400 VMLFRPAQQLEVISTGLLAIGIICTVPIMARWK 432
AA_permease pfam00324
Amino acid permease;
13-447 5.74e-96

Amino acid permease;


Pssm-ID: 366028 [Multi-domain]  Cd Length: 467  Bit Score: 296.92  E-value: 5.74e-96
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1153953867  13 HITMISIGGVIGAGLFVGSGAVVHSAGPGS-IISYALAGLLVVFVMRMLGEMAAINPTSGSFATYAREAIGPWAGYTIGW 91
Cdd:pfam00324   1 HVQMIALGGVIGTGLFVGSGSVLGQAGPAGaLLGYLISGVVIFLVMLSLGEISTNGPVSGGFYTYASRFLGPSLGFATGW 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1153953867  92 LYWFFWVIVIAIEATAGAGIIQYW--IPEIPLWLLSLILTILL-TLTNVFSVKSFGEFEYWFSFIKVISIVLFLCLGLAV 168
Cdd:pfam00324  81 NYWLSWITVLALELTAASILIQFWelVPDIPYLWVWGAVFLVLlTIINLVGVKWYGEAEFWFALIKIIAIIGFIIVGIIL 160

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1153953867 169 ILGFVPGTEAPGTS--NLVGQGGFMPNGISSVLLGITVVIFSFMGSEIVAVAAGESAEPVKAVKTATNSVIWRILVFFIG 246
Cdd:pfam00324 161 LSGGNPNDGAIFRYlgDNGGKNNFPPGFGKGFISVFVIAFFAFTGIELVGIAAGEVKNPEKSIPKAILQVIWRITIFYIL 240

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1153953867 247 SIAVVVTLLPWNSANILK------SPFVAVLEHIGIPAAAQIMNFIVLTAVLSCLNSGLYTNSRMLFSMAERGDAPKAFL 320
Cdd:pfam00324 241 SLLAIGLLVPWNDPGLLNdsasaaSPFVIFFKFLGISGLAPLINAVILTAALSAANSSLYSGSRMLYSLARDGLAPKFLK 320

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1153953867 321 KLNSSGVPVRAVLFGTFFAYIGVVFSYISPDKVFLFLVNASGGIALLVYLVIAISHLKIRKKMG--RVEQQNLKVKMWFF 398
Cdd:pfam00324 321 KVDKRGVPLRAILVSMVISLLALLLASLNPAIVFNFLLAISGLSGLIVWGLISLSHLRFRKAFKyqGRSIDELPFKAPLG 400

                         410       420       430       440       450       460
                  ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1153953867 399 PYVTYVTIAAIIAVLIAMLAIESLRS-------------QALLTMLVTVLIIISYFIFNRNK 447
Cdd:pfam00324 401 PLGVILGLAAIIIILIIQFLYAFLPVpggpknwgagsfaAAYLIVLLFLIILIGVKLHVKNW 462
 
Name Accession Description Interval E-value
AnsP COG1113
L-asparagine transporter or related permease [Amino acid transport and metabolism];
2-448 0e+00

L-asparagine transporter or related permease [Amino acid transport and metabolism];


Pssm-ID: 440730 [Multi-domain]  Cd Length: 458  Bit Score: 574.76  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1153953867   2 DKNLKKDLKIRHITMISIGGVIGAGLFVGSGAVVHSAGPGSIISYALAGLLVVFVMRMLGEMAAINPTSGSFATYAREAI 81
Cdd:COG1113    10 EEGLKRGLKNRHIQMIALGGAIGTGLFLGSGKAIALAGPAVLLSYLIAGLIVFLVMRALGEMAVANPVSGSFSDYAREYL 89

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1153953867  82 GPWAGYTIGWLYWFFWVIVIAIEATAGAGIIQYWIPEIPLWLLSLILTILLTLTNVFSVKSFGEFEYWFSFIKVISIVLF 161
Cdd:COG1113    90 GPWAGFVTGWLYWFFWVLVGMAEATAVGIYLQFWFPDVPQWVWALVFLVLLTAINLLSVKLFGEFEFWFALIKVVAIVAF 169

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1153953867 162 LCLGLAVIL-GF-VPGTEAPGTSNLVGQGGFMPNGISSVLLGITVVIFSFMGSEIVAVAAGESAEPVKAVKTATNSVIWR 239
Cdd:COG1113   170 IVVGLLLIFfGFgLPGGPPAGLSNLWDHGGFFPNGIGGVLAALQIVVFAFGGIELVGIAAAEAKDPEKTIPKAINSVIWR 249

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1153953867 240 ILVFFIGSIAVVVTLLPWNSANILKSPFVAVLEHIGIPAAAQIMNFIVLTAVLSCLNSGLYTNSRMLFSMAERGDAPKAF 319
Cdd:COG1113   250 ILLFYVGSLFVILALVPWNQIGAGGSPFVTVFSLLGIPAAAGIMNFVVLTAALSSLNSGLYSTSRMLYSLAERGDAPKFF 329

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1153953867 320 LKLNSSGVPVRAVLFGTFFAYIGVVFSYISPDKVFLFLVNASGGIALLVYLVIAISHLKIRKKMGRVEQQNLKVKMWFFP 399
Cdd:COG1113   330 GKLSKRGVPVRAILLSAVVLLIGVVLNYLLPEKAFTFLLSISGFGALFVWLMILVSQLKFRRRLPREGAAALKFKMPGFP 409

                         410       420       430       440
                  ....*....|....*....|....*....|....*....|....*....
gi 1153953867 400 YVTYVTIAAIIAVLIAMLAIESLRSQALLTMLVTVLIIISYFIFNRNKN 448
Cdd:COG1113   410 YTSYLTLAFLAAVLVLMAFDPDTRIALIVGPVWLALLVVGYFLVRRRRA 458
GABAperm TIGR01773
gamma-aminobutyrate permease; GABA permease (gabP) catalyzes the translocation of ...
 5-447 0e+00

gamma-aminobutyrate permease; GABA permease (gabP) catalyzes the translocation of 4-aminobutyrate (GABA) across the plasma membrane, with homologues expressed in Gram-negative and Gram-positive organisms. This permease is a highly hydrophobic transmembrane protein consisting of 12 transmembrane domains with hydrophilic N- and C-terminal ends. Induced by nitrogen-limited culture conditions in both Escherichia coli and Bacillus subtilis, gabP is an energy dependent transport system stimulated by membrane potential and has been observed adjacent and distant from other GABA degradation proteins. GabP is highly homologous to amino acid permeases from B. subtilis, E. coli, as well as to other members of the amino acid permease family (pfam00324). A member of the APC (amine-polyamine-choline) transporter superfamily, GABA permease possesses a "consensus amphiphatic region" (CAR) found to be evolutionarily conserved within this transport family. This amphiphatic region is located between helix 8 and cytoplasmic loop 8-9, forming a potential channel domain and suggested to play a significant role in ligand recognition and translocation. Unique to GABA permeases, a conserved cysteine residue (CYS-300, E.coli) located at the beginning of the amphiphatic domain, has been determined to be critical for catalytic specificity. [Transport and binding proteins, Amino acids, peptides and amines]


Pssm-ID: 273797  Cd Length: 452  Bit Score: 529.83  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1153953867   5 LKKDLKIRHITMISIGGVIGAGLFVGSGAVVHSAGPGSIISYALAGLLVVFVMRMLGEMAAINPTSGSFATYAREAIGPW 84
Cdd:TIGR01773  10 LPNGLKTRHVTMLSIAGVIGAGLFVGSGSAIASAGPAALLAYLLAGLLVVFIMRMLGEMAVANPDTGSFSTYADDAIGRW 89

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1153953867  85 AGYTIGWLYWFFWVIVIAIEATAGAGIIQYWIPEIPLWLLSLILTILLTLTNVFSVKSFGEFEYWFSFIKVISIVLFLCL 164
Cdd:TIGR01773  90 AGFTIGWLYWWFWVLVIPLEAIAAAGILQYWFPDIPLWLFSLILTIVLTLTNLYSVKSYGEFEFWFALIKVIAIIAFIIL 169

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1153953867 165 GLAVILGFVPGTEAPGTSNLVGQGGFMPNGISSVLLGITVVIFSFMGSEIVAVAAGESAEPVKAVKTATNSVIWRILVFF 244
Cdd:TIGR01773 170 GAVAIFGFAPGSEVSGFSNLTGKGGFFPNGIGAVLLAILVTMFSFMGTEIVTIAAAESSNPIKSITRATNSVIWRIIVFY 249

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1153953867 245 IGSIAVVVTLLPWNSANILKS-PFVAVLEHIGIPAAAQIMNFIVLTAVLSCLNSGLYTNSRMLFSMAERGDAPKAFLKLN 323
Cdd:TIGR01773 250 LGSIFIVVALLPWNSPNLLEVgSYVAVLELLGIPHAKLIMDFVVLTAVLSCLNSALYTTSRMLYSLAERGDAPRVFMKLN 329

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1153953867 324 SSGVPVRAVLFGTFFAYIGVVFSYISPDKVFLFLVNASGGIALLVYLVIAISHLKIRKKMgRVEQQNLKVKMWFFPYVTY 403
Cdd:TIGR01773 330 KKGVPVQAVLASTFFSFLTVVVNYFAPDKVFLFLVNSSGAIALLVYLVIAVSQLRMRKKL-KANGEAIKIRMWLYPWLTW 408

                         410       420       430       440
                  ....*....|....*....|....*....|....*....|....
gi 1153953867 404 VTIAAIIAVLIAMLAIESLRSQALLTMLVTVLIIISYFIFNRNK 447
Cdd:TIGR01773 409 LVIIFICGILVSMLFIPSMRDEVLLTGLLTIIVLCSYLVFARRK 452
LysP COG0833
Amino acid permease [Amino acid transport and metabolism];
2-460 3.13e-161

Amino acid permease [Amino acid transport and metabolism];


Pssm-ID: 440595 [Multi-domain]  Cd Length: 467  Bit Score: 463.87  E-value: 3.13e-161
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1153953867   2 DKNLKKDLKIRHITMISIGGVIGAGLFVGSGAVVHSAGP-GSIISYALAGLLVVFVMRMLGEMAAINPTSGSFATYAREA 80
Cdd:COG0833     7 QNKLKRGLKSRHLSMIALGGVIGTGLFLASGYTISQAGPgGALLAYLLGGLMVYFLMTSLGELAVAMPVSGSFQTYATRF 86

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1153953867  81 IGPWAGYTIGWLYWFFWVIVIAIEATAGAGIIQYWIPEIPLWLLSLILTILLTLTNVFSVKSFGEFEYWFSFIKVISIVL 160
Cdd:COG0833    87 IDPAFGFAVGWNYWLNWAITVAAELTAAGIIMQYWFPDVPVWIWSLLFLALIFLLNALSVKAFGESEFWFSLIKVITVIA 166

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1153953867 161 FLCLGLAVILGFVPGtEAPGTSNLVGQGGFMPNGISSVLLGITVVIFSFMGSEIVAVAAGESAEPVKAVKTATNSVIWRI 240
Cdd:COG0833   167 FIIVGLLMIFGIIGG-HAPGFSNFTTGDGPFPGGFLAILGVMMIVGFSFQGTELIGIAAGESENPEKTIPKAIRQVFWRI 245

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1153953867 241 LVFFIGSIAVVVTLLPWNSANILKSPFVAVLEHIGIPAAAQIMNFIVLTAVLSCLNSGLYTNSRMLFSMAERGDAPKAFL 320
Cdd:COG0833   246 LLFYILAIFVIAALIPYTDAGVAESPFTLVFERAGIPYAADIMNAVILTAVLSAGNSGLYASTRMLWSLAKEGMAPKIFA 325

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1153953867 321 KLNSSGVPVRAVLFGTFFAYIGVVFSYISPDKVFLFLVNASGGIALLVYLVIAISHLKIRKKMgrVEQQN----LKVKMW 396
Cdd:COG0833   326 KLNKRGVPLNALLATMAVGLLALLSSFFGAGTVYLWLLSISGLTGFIAWLGIAISHYRFRRAY--VAQGGdledLKYKAP 403

                         410       420       430       440       450       460
                  ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1153953867 397 FFPYVTYVTIAAIIAVLIAMLAIESLRSQALLTMLVTVLIIISYFIFNRNKNSTVLNTKSKNEE 460
Cdd:COG0833   404 LFPFGPIFAFILCLIVIIGQAFDPEQRIALYIGIPFFLACYLGYKLKKKTKLVPLEEMDLSPED 467
PRK10197 PRK10197
GABA permease;
16-447 2.45e-117

GABA permease;


Pssm-ID: 182297  Cd Length: 446  Bit Score: 351.23  E-value: 2.45e-117
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1153953867  16 MISIGGVIGAGLFVGSGAVVHSAGPGSIISYALAGLLVVFVMRMLGEMAAINPTSGSFATYAREAIGPWAGYTIGWLYWF 95
Cdd:PRK10197    1 MLSIAGVIGASLFVGSSVAIAEAGPAVLLAYLFAGLLVVMIMRMLAEMAVATPDTGSFSTYADKAIGRWAGYTIGWLYWW 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1153953867  96 FWVIVIAIEATAGAGIIQYWIPEIPLWLLSLILTILLTLTNVFSVKSFGEFEYWFSFIKVISIVLFLCLGLAVILGFVPG 175
Cdd:PRK10197   81 FWVLVIPLEANIAAMILHSWVPGIPIWLFSLVITLALTGSNLLSVKNYGEFEFWLALCKVIAILAFIFLGAVAISGFYPY 160

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1153953867 176 TEAPGTSNLVGQGGFMPNGISSVLLGITVVIFSFMGSEIVAVAAGESAEPVKAVKTATNSVIWRILVFFIGSIAVVVTLL 255
Cdd:PRK10197  161 AEVSGISRLWDSGGFMPNGFGAVLSAMLITMFSFMGAEIVTIAAAESDTPEKHIVRATNSVIWRISIFYLCSIFVVVALI 240

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1153953867 256 PWNSANILK-SPFVAVLEHIGIPAAAQIMNFIVLTAVLSCLNSGLYTNSRMLFSMAERGDAPKAFLKLNSSGVPVRAVLF 334
Cdd:PRK10197  241 PWNMPGLKAvGSYRSVLELLNIPHAKLIMDCVILLSVTSCLNSALYTASRMLYSLSRRGDAPAVMGKINRSKTPYVAVLL 320

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1153953867 335 GTFFAYIGVVFSYISPDKVFLFLVNASGGIALLVYLVIAISHLKIRKKMgRVEQQNLKVKMWFFPYVTYVTIAAIIAVLI 414
Cdd:PRK10197  321 STGAAFLTVVVNYYAPAKVFKFLIDSSGAIALLVYLVIAVSQLRMRKIL-RAEGSEIRLRMWLYPWLTWLVIGFITFVLV 399

                         410       420       430
                  ....*....|....*....|....*....|...
gi 1153953867 415 AMLAIESLRSQALLTMLVTVLIIISYFIFNRNK 447
Cdd:PRK10197  400 VMLFRPAQQLEVISTGLLAIGIICTVPIMARWK 432
PRK10238 PRK10238
aromatic amino acid transporter AroP;
5-442 2.98e-101

aromatic amino acid transporter AroP;


Pssm-ID: 182324 [Multi-domain]  Cd Length: 456  Bit Score: 310.35  E-value: 2.98e-101
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1153953867   5 LKKDLKIRHITMISIGGVIGAGLFVGSGAVVHSAGPGSIISYALAGLLVVFVMRMLGEMAAINPTSGSFATYAREAIGPW 84
Cdd:PRK10238   10 LKRGLKNRHIQLIALGGAIGTGLFLGSASVIQSAGPGIILGYAIAGFIAFLIMRQLGEMVVEEPVAGSFSHFAYKYWGSF 89

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1153953867  85 AGYTIGWLYWFFWVIVIAIEATAGAGIIQYWIPEIPLWLLSLILTILLTLTNVFSVKSFGEFEYWFSFIKVISIVLFLCL 164
Cdd:PRK10238   90 AGFASGWNYWVLYVLVAMAELTAVGKYIQFWYPEIPTWVSAAVFFVVINAINLTNVKVFGEMEFWFAIIKVIAVVAMIIF 169

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1153953867 165 GLAVILGFVPGTEAPgTSNLVGQGGFMPNGISSVLLGITVVIFSFMGSEIVAVAAGESAEPVKAVKTATNSVIWRILVFF 244
Cdd:PRK10238  170 GGWLLFSGNGGPQAT-VSNLWDQGGFLPHGFTGLVMMMAIIMFSFGGLELVGITAAEADNPEQSIPKATNQVIYRILIFY 248

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1153953867 245 IGSIAVVVTLLPWNSANILKSPFVAVLEHIGIPAAAQIMNFIVLTAVLSCLNSGLYTNSRMLFSMAERGDAPKAFLKLNS 324
Cdd:PRK10238  249 IGSLAVLLSLMPWTRVTADTSPFVLIFHELGDTFVANALNIVVLTAALSVYNSCVYCNSRMLFGLAQQGNAPKALASVDK 328

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1153953867 325 SGVPVRAVLFGTFFAYIGVVFSYISPDKVFLFLVNASGGIALLVYLVIAISHLKIRKKMgrvEQQNLKVKM--WFFPYVT 402
Cdd:PRK10238  329 RGVPVNTILVSALVTALCVLINYLAPESAFGLLMALVVSALVINWAMISLAHMKFRRAK---QEQGVVTRFpaLLYPLGN 405

                         410       420       430       440
                  ....*....|....*....|....*....|....*....|
gi 1153953867 403 YVTIAAIIAVLIAMLAIESLRSQALLTMLVTVLIIISYFI 442
Cdd:PRK10238  406 WICLLFMAAVLVIMLMTPGMAISVYLIPVWLIVLGIGYLF 445
PRK10836 PRK10836
lysine transporter; Provisional
 5-399 1.80e-99

lysine transporter; Provisional


Pssm-ID: 182767  Cd Length: 489  Bit Score: 306.75  E-value: 1.80e-99
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1153953867   5 LKKDLKIRHITMISIGGVIGAGLFVGSGAVVHSAGPG-SIISYALAGLLVVFVMRMLGEMAAINPTSGSFATYAREAIGP 83
Cdd:PRK10836   13 LRRELKARHLTMIAIGGSIGTGLFVASGATISQAGPGgALLSYMLIGLMVYFLMTSLGELAAYMPVSGSFATYGQNYVEE 92

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1153953867  84 WAGYTIGWLYWFFWVIVIAIEATAGAGIIQYWIPEIPLWLLSLILTILLTLTNVFSVKSFGEFEYWFSFIKVISIVLFLC 163
Cdd:PRK10836   93 GFGFALGWNYWYNWAVTIAVDLVAAQLVMSWWFPDTPGWIWSALFLGVIFLLNYISVRGFGEAEYWFSLIKVTTVIVFII 172

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1153953867 164 LGLAVILGFVPGTEAPGTSNL-VGQGGFMpNGISSVLLGITVVIFSFMGSEIVAVAAGESAEPVKAVKTATNSVIWRILV 242
Cdd:PRK10836  173 VGVLMIIGIFKGAEPAGWSNWtIGDAPFA-GGFAAMIGVAMIVGFSFQGTELIGIAAGESEDPAKNIPRAVRQVFWRILL 251

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1153953867 243 FFIGSIAVVVTLLPWNSANILK--------SPFVAVLEHIGIPAAAQIMNFIVLTAVLSCLNSGLYTNSRMLFSMAERGD 314
Cdd:PRK10836  252 FYVFAILIISLIIPYTDPSLLRndvkdisvSPFTLVFQHAGLLSAAAVMNAVILTAVLSAGNSGMYASTRMLYTLACDGK 331

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1153953867 315 APKAFLKLNSSGVPVRAVLFGTFFAYIGVVFSYISPDKVFLFLVNASGGIALLVYLVIAISHLKIRKkmGRVEQ----QN 390
Cdd:PRK10836  332 APRIFAKLSRGGVPRNALYATTVIAGLCFLTSMFGNQTVYLWLLNTSGMTGFIAWLGIAISHYRFRR--GYVLQghdlND 409


                  ....*....
gi 1153953867 391 LKVKMWFFP 399
Cdd:PRK10836  410 LPYRSGFFP 418
AA_permease pfam00324
Amino acid permease;
13-447 5.74e-96

Amino acid permease;


Pssm-ID: 366028 [Multi-domain]  Cd Length: 467  Bit Score: 296.92  E-value: 5.74e-96
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1153953867  13 HITMISIGGVIGAGLFVGSGAVVHSAGPGS-IISYALAGLLVVFVMRMLGEMAAINPTSGSFATYAREAIGPWAGYTIGW 91
Cdd:pfam00324   1 HVQMIALGGVIGTGLFVGSGSVLGQAGPAGaLLGYLISGVVIFLVMLSLGEISTNGPVSGGFYTYASRFLGPSLGFATGW 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1153953867  92 LYWFFWVIVIAIEATAGAGIIQYW--IPEIPLWLLSLILTILL-TLTNVFSVKSFGEFEYWFSFIKVISIVLFLCLGLAV 168
Cdd:pfam00324  81 NYWLSWITVLALELTAASILIQFWelVPDIPYLWVWGAVFLVLlTIINLVGVKWYGEAEFWFALIKIIAIIGFIIVGIIL 160

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1153953867 169 ILGFVPGTEAPGTS--NLVGQGGFMPNGISSVLLGITVVIFSFMGSEIVAVAAGESAEPVKAVKTATNSVIWRILVFFIG 246
Cdd:pfam00324 161 LSGGNPNDGAIFRYlgDNGGKNNFPPGFGKGFISVFVIAFFAFTGIELVGIAAGEVKNPEKSIPKAILQVIWRITIFYIL 240

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1153953867 247 SIAVVVTLLPWNSANILK------SPFVAVLEHIGIPAAAQIMNFIVLTAVLSCLNSGLYTNSRMLFSMAERGDAPKAFL 320
Cdd:pfam00324 241 SLLAIGLLVPWNDPGLLNdsasaaSPFVIFFKFLGISGLAPLINAVILTAALSAANSSLYSGSRMLYSLARDGLAPKFLK 320

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1153953867 321 KLNSSGVPVRAVLFGTFFAYIGVVFSYISPDKVFLFLVNASGGIALLVYLVIAISHLKIRKKMG--RVEQQNLKVKMWFF 398
Cdd:pfam00324 321 KVDKRGVPLRAILVSMVISLLALLLASLNPAIVFNFLLAISGLSGLIVWGLISLSHLRFRKAFKyqGRSIDELPFKAPLG 400

                         410       420       430       440       450       460
                  ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1153953867 399 PYVTYVTIAAIIAVLIAMLAIESLRS-------------QALLTMLVTVLIIISYFIFNRNK 447
Cdd:pfam00324 401 PLGVILGLAAIIIILIIQFLYAFLPVpggpknwgagsfaAAYLIVLLFLIILIGVKLHVKNW 462
PRK11387 PRK11387
S-methylmethionine permease;
5-385 1.00e-92

S-methylmethionine permease;


Pssm-ID: 236904  Cd Length: 471  Bit Score: 288.67  E-value: 1.00e-92
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1153953867   5 LKKDLKIRHITMISIGGVIGAGLFVGSGAVVHSAGP-GSIISYALAGLLVVFVMRMLGEMAAINPTSGSFATYAREAIGP 83
Cdd:PRK11387   12 FKRTMKVRHLVMLSLGGVIGTGLFFNTGYIISTTGAaGTLLAYLIGALVVYLVMQCLGELSVAMPETGAFHVYAARYLGP 91

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1153953867  84 WAGYTIGWLYWFFWVIVIAIEATAGAGIIQYWIPEIPLWLLSLILTILLTLTNVFSVKSFGEFEYWFSFIKVISIVLFLC 163
Cdd:PRK11387   92 ATGYTVAWLYWLTWTVALGSSLTAAGFCMQYWFPQVPVWPWCLLFCALIFGLNVVSTRFFAEGEFWFSLIKVVTILAFIV 171

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1153953867 164 LGLAVILGFVP---GTEAPGTSNLVGQGGFmPNGISSVLLGITVVIFSFMGSEIVAVAAGESAEPVKAVKTATNSVIWRI 240
Cdd:PRK11387  172 LGGAAIFGFIPmqdGSPAPGLRNLTAEGWF-PHGGLPILMTMVAVNFAFSGTELIGIAAGETENPAKVIPVAIRTTIARL 250

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1153953867 241 LVFFIGSIAVVVTLLPWNSANILKSPFVAVLEHIGIPAAAQIMNFIVLTAVLSCLNSGLYTNSRMLFSMAERGDAPKAFL 320
Cdd:PRK11387  251 VIFFVGTVLVLAALIPMQQAGVEKSPFVLVFEKVGIPYAADIFNFVILTAILSAANSGLYASGRMLWSLSNEGTLPACFA 330

                         330       340       350       360       370       380
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1153953867 321 KLNSSGVPVRAVLFGTFFAYIGVVFSYISPDKVFLFLVNASGGIALLVYLVIAISHLKIRKKMGR 385
Cdd:PRK11387  331 RLTKRGIPLTALSVSMLGGLLALFSSVVAPDTVFVALSAISGFAVVAVWLSICASHFMFRRRHLR 395
PRK10746 PRK10746
putative transport protein YifK; Provisional
 3-455 1.30e-90

putative transport protein YifK; Provisional


Pssm-ID: 182694  Cd Length: 461  Bit Score: 283.25  E-value: 1.30e-90
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1153953867   3 KNLKKDLKIRHITMISIGGVIGAGLFVGSGAVVHSAGPGSIISYALAGLLVVFVMRMLGEMAAINPTSGSFATYAREAIG 82
Cdd:PRK10746    6 PELQRGLEARHIELIALGGTIGVGLFMGAASTLKWAGPSVLLAYIIAGLFVFFIMRSMGEMLFLEPVTGSFAVYAHRYMS 85

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1153953867  83 PWAGYTIGWLYWFFWVIVIAIEATAGAGIIQYWIPEIPLWLLSLILTILLTLTNVFSVKSFGEFEYWFSFIKVISIVLFL 162
Cdd:PRK10746   86 PFFGYLTAWSYWFMWMAVGISEITAIGVYVQFWFPEMAQWIPALIAVALVALANLAAVRLYGEIEFWFAMIKVTTIIVMI 165

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1153953867 163 CLGLAVIL-GFVPGTEAPGTSNLVGQGGFMPNGISSVLLGITVVIFSFMGSEIVAVAAGESAEPVKAVKTATNSVIWRIL 241
Cdd:PRK10746  166 VIGLGVIFfGFGNGGQSIGFSNLTEHGGFFAGGWKGFLTALCIVVASYQGVELIGITAGEAKNPQVTLRSAVGKVLWRIL 245

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1153953867 242 VFFIGSIAVVVTLLPWNSANILKSPFVAVLEHIGIPAAAQIMNFIVLTAVLSCLNSGLYTNSRMLFSMAERGDAPKAFLK 321
Cdd:PRK10746  246 IFYVGAIFVIVTIFPWNEIGSNGSPFVLTFAKIGITAAAGIINFVVLTAALSGCNSGMYSCGRMLYALAKNRQLPAAMAK 325

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1153953867 322 LNSSGVPVRAVLFGTFFAYIGVVFSYI--SPDKVFLFLVNASGGIALLVYLVIAISHLKIRKKMGRVEQQNlKVKMWFFP 399
Cdd:PRK10746  326 VSRHGVPVAGVAVSILILLVGSCLNYIipNPQRVFVYVYSASVLPGMVPWFVILISQLRFRRAHKAAIASH-PFRSILFP 404

                         410       420       430       440       450
                  ....*....|....*....|....*....|....*....|....*....|....*.
gi 1153953867 400 YVTYVTIAAIIAVLIAMLAIESLRSQALLTMLVTVLIIISYFIFNRNKNSTVLNTK 455
Cdd:PRK10746  405 WANYLTMAFLICVLIGMYFNEDTRMSLFVGIIFLLAVTLIYKVFGLNRHGKAHKLE 460
2A0310 TIGR00913
amino acid permease (yeast); [Transport and binding proteins, Amino acids, peptides and amines]
 6-383 4.76e-89

amino acid permease (yeast); [Transport and binding proteins, Amino acids, peptides and amines]


Pssm-ID: 273334  Cd Length: 478  Bit Score: 279.55  E-value: 4.76e-89
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1153953867   6 KKDLKIRHITMISIGGVIGAGLFVGSGAVVHSAGP-GSIISYALAGLLVVFVMRMLGEMAAINP-TSGSFATYAREAIGP 83
Cdd:TIGR00913   1 KKSLKQRHIQMIALGGTIGTGLLVGSGTALATGGPaGLLIGYAIMGSIIYCVMQSLGEMATFYPvVSGSFATYASRFVDP 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1153953867  84 WAGYTIGWLYWFFWVIVIAIEATAGAGIIQYWIPEIPLWLLSLILTILLTLTNVFSVKSFGEFEYWFSFIKVISIVLFLC 163
Cdd:TIGR00913  81 AFGFAVGWNYWLQWLIVLPLELVTASMTIQYWTDKVNPAVWIAIFYVFIVIINLFGVKGYGEAEFWFSSIKILAIIGFII 160

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1153953867 164 LGLAVILGFVPGTEAPGTSNLVGQGGFMPNGISSVLLGITVVI----FSFMGSEIVAVAAGESAEPVKAVKTATNSVIWR 239
Cdd:TIGR00913 161 LSIILNCGGGPNHGYIGFRYWHDPGAFAGGTIGGRFKGVCSVFvtaaFSFGGTELVALTAGEAANPRKSIPRAAKRTFWR 240

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1153953867 240 ILVFFIGSIAVVVTLLPWNSANIL---------KSPFVAVLEHIGIPAAAQIMNFIVLTAVLSCLNSGLYTNSRMLFSMA 310
Cdd:TIGR00913 241 ILVFYILTLFLIGFLVPYNDPRLLssssssdsaASPFVIAIQNHGIKVLPHIFNAVILISVLSAANSSLYASSRTLYALA 320

                         330       340       350       360       370       380       390
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1153953867 311 ERGDAPKAFLKLNSSGVPVRAVLFGTFFAYIGVVFSYISPDKVFLFLVNASGGIALLVYLVIAISHLKIRKKM 383
Cdd:TIGR00913 321 HQGLAPKIFAYVDRRGVPYVAVIVSSLFGLLAFLAVSKKEAEVFTWLLNISGLSGFFTWMCICLSHIRFRKAM 393
PRK10249 PRK10249
phenylalanine transporter; Provisional
 5-445 5.58e-89

phenylalanine transporter; Provisional


Pssm-ID: 236667  Cd Length: 458  Bit Score: 278.79  E-value: 5.58e-89
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1153953867   5 LKKDLKIRHITMISIGGVIGAGLFVGSGAVVHSAGPGSIISYALAGLLVVFVMRMLGEMAAINPTSGSFATYAREAIGPW 84
Cdd:PRK10249   19 LHRGLHNRHIQLIALGGAIGTGLFLGIGPAIQMAGPAVLLGYGVAGIIAFLIMRQLGEMVVEEPVSGSFAHFAYKYWGPF 98

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1153953867  85 AGYTIGWLYWFFWVIVIAIEATAGAGIIQYWIPEIPLWLLSLILTILLTLTNVFSVKSFGEFEYWFSFIKVISIVLFLCL 164
Cdd:PRK10249   99 AGFLSGWNYWVMFVLVGMAELTAAGIYMQYWFPDVPTWIWAAAFFIIINAVNLVNVRLYGETEFWFALIKVLAIIGMIGF 178

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1153953867 165 GLAVILGFVPGTEApGTSNLVGQGGFMPNGISSVLLGITVVIFSFMGSEIVAVAAGESAEPVKAVKTATNSVIWRILVFF 244
Cdd:PRK10249  179 GLWLLFSGHGGEKA-SIDNLWRYGGFFATGWNGLILSLAVIMFSFGGLELIGITAAEARDPEKSIPKAVNQVVYRILLFY 257

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1153953867 245 IGSIAVVVTLLPWNSANILKSPFVAVLEHIGIPAAAQIMNFIVLTAVLSCLNSGLYTNSRMLFSMAERGDAPKAFLKLNS 324
Cdd:PRK10249  258 IGSLVVLLALYPWVEVKSNSSPFVMIFHNLDSNVVASALNFVILVASLSVYNSGVYSNSRMLFGLSVQGNAPKFLTRVSR 337

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1153953867 325 SGVPVRAVLFGTFFAYIGVVFSYISPDKVFLFLVNASGGIALLVYLVIAISHLKIRKKMGRvEQQNLKVKMWFFPYVTYV 404
Cdd:PRK10249  338 RGVPINSLMLSGAITSLVVLINYLLPQKAFGLLMALVVATLLLNWIMICLAHLRFRAAMRR-QGRETQFKALLYPFGNYL 416

                         410       420       430       440
                  ....*....|....*....|....*....|....*....|.
gi 1153953867 405 TIAAIIAVLIAMLAIESLRSQALLTMLVTVLIIISYFIFNR 445
Cdd:PRK10249  417 CIAFLGMILLLMCTMDDMRLSAILLPVWIVFLFVAFKTLRR 457
PRK11049 PRK11049
D-alanine/D-serine/glycine permease; Provisional
 5-454 2.36e-88

D-alanine/D-serine/glycine permease; Provisional


Pssm-ID: 236830  Cd Length: 469  Bit Score: 277.38  E-value: 2.36e-88
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1153953867   5 LKKDLKIRHITMISIGGVIGAGLFVGSGAVVHSAGPGSIISYALAGLLVVFVMRMLGEMAAINPTSGSFATYAREAIGPW 84
Cdd:PRK11049   18 LRRNLTNRHIQLIAIGGAIGTGLFMGSGKTISLAGPSIIFVYMIIGFMLFFVMRAMGELLLSNLEYKSFSDFASDLLGPW 97

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1153953867  85 AGYTIGWLYWFFWVIVIAIEATAGAGIIQYWIPEIPLWLLSLILTILLTLTNVFSVKSFGEFEYWFSFIKVISIVLFLCL 164
Cdd:PRK11049   98 AGYFTGWTYWFCWVVTGIADVVAITAYAQFWFPDLSDWVASLAVVLLLLSLNLATVKMFGEMEFWFAMIKIVAIVALIVV 177

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1153953867 165 GLA-VILGFV-PGTEAPGTSNLVGQGGFMPNGISSVLLGITVVIFSFMGSEIVAVAAGESAEPVKAVKTATNSVIWRILV 242
Cdd:PRK11049  178 GLVmVAMHFQsPTGVEASFAHLWNDGGMFPKGLSGFFAGFQIAVFAFVGIELVGTTAAETKDPEKSLPRAINSIPIRIIM 257

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1153953867 243 FFIGSIAVVVTLLPWNSANILKSPFVAVLEHIGIPAAAQIMNFIVLTAVLSCLNSGLYTNSRMLFSMAERGDAPKAFLKL 322
Cdd:PRK11049  258 FYVFALIVIMSVTPWSSVVPDKSPFVELFVLVGLPAAASVINFVVLTSAASSANSGVFSTSRMLFGLAQEGVAPKAFAKL 337

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1153953867 323 NSSGVPVRAVLFGTFFAYIGVVFSYISPD--KVFLFLVNASGGIALLVYLVIAISHLKIRKKMGRVEQQNlKVKMWFFPY 400
Cdd:PRK11049  338 SKRAVPAKGLTFSCICLLGGVVLLYVNPSviGAFTLVTTVSAILFMFVWTIILCSYLVYRKQRPHLHEKS-IYKMPLGKL 416

                         410       420       430       440       450
                  ....*....|....*....|....*....|....*....|....*....|....
gi 1153953867 401 VTYVTiAAIIAVLIAMLAIESLRSQALLTMLVTVLIIISYFIFNRNKNSTVLNT 454
Cdd:PRK11049  417 MCWVC-MAFFAFVLVLLTLEDDTRQALIVTPLWFIALGLGYLFIGKKRAAELRK 469
proY PRK10580
putative proline-specific permease; Provisional
 5-395 8.18e-87

putative proline-specific permease; Provisional


Pssm-ID: 182566 [Multi-domain]  Cd Length: 457  Bit Score: 273.23  E-value: 8.18e-87
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1153953867   5 LKKDLKIRHITMISIGGVIGAGLFVGSGAVVHSAGPGSIISYALAGLLVVFVMRMLGEMAAINPTSGSFATYAREAIGPW 84
Cdd:PRK10580    7 LKRGLSTRHIRFMALGSAIGTGLFYGSADAIKMAGPSVLLAYIIGGVAAYIIMRALGEMSVHNPAASSFSRYAQENLGPL 86

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1153953867  85 AGYTIGWLYWFFWVIVIAIEATAGAGIIQYWIPEIPLWLLSLILTILLTLTNVFSVKSFGEFEYWFSFIKVISIVLFLCL 164
Cdd:PRK10580   87 AGYITGWTYCFEILIVAIADVTAFGIYMGVWFPTVPHWIWVLSVVLIICAVNLMSVKVFGELEFWFSFFKVATIIIMIVA 166

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1153953867 165 GLAVIL-GFVPGTEAPGTSNLVGQGGFMPNGISSVLLGITVVIFSFMGSEIVAVAAGESAEPVKAVKTATNSVIWRILVF 243
Cdd:PRK10580  167 GIGIIIwGIGNGGQPTGIHNLWSNGGFFSNGWLGMVMSLQMVMFAYGGIEIIGITAGEAKDPEKSIPRAINSVPMRILVF 246

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1153953867 244 FIGSIAVVVTLLPWNSANILKSPFVAVLEHIGIPAAAQIMNFIVLTAVLSCLNSGLYTNSRMLFSMAERGDAPKAFLKLN 323
Cdd:PRK10580  247 YVGTLFVIMSIYPWNQVGTNGSPFVLTFQHMGITFAASILNFVVLTASLSAINSDVFGVGRMLHGMAEQGSAPKIFSKTS 326

                         330       340       350       360       370       380       390
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1153953867 324 SSGVPVRAVLFGTFFAYIGVVFSYISPDKVFLFLVNASGGIALLVYLVIAISHLKIRKKMGRVEQQNLKVKM 395
Cdd:PRK10580  327 RRGIPWVTVLVMTTALLFAVYLNYIMPENVFLVIASLATFATVWVWIMILLSQIAFRRRLPPEEVKALKFKV 398
PRK15049 PRK15049
L-asparagine permease;
12-405 8.07e-74

L-asparagine permease;


Pssm-ID: 185009  Cd Length: 499  Bit Score: 240.68  E-value: 8.07e-74
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1153953867  12 RHITMISIGGVIGAGLFVGSGAVVHSAGPGSIISYALAGLLVVFVMRMLGEMAAINPTSGSFATYAREAIGPWAGYTIGW 91
Cdd:PRK15049   33 RQVQMIAIGGAIGTGLFLGAGARLQMAGPALALVYLICGLFSFFILRALGELVLHRPSSGSFVSYAREFLGEKAAYVAGW 112

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1153953867  92 LYWFFWVIVIAIEATAGAGIIQYW--IPEIPLWLLSLILTILLTLTNVFSVKSFGEFEYWFSFIKVISIVLFLCLGLAVI 169
Cdd:PRK15049  113 MYFINWAMTGIVDITAVALYMHYWgaFGGVPQWVFALAALTIVGTMNMIGVKWFAEMEFWFALIKVLAIVTFLVVGTVFL 192

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1153953867 170 lgfvpGTEAPGTSNLVG------QGGFMPNGISSVLLGITVVIFSFMGSEIVAVAAGESAEPVKAVKTATNSVIWRILVF 243
Cdd:PRK15049  193 -----GSGQPLDGNTTGfhlitdNGGFFPHGLLPALVLIQGVVFAFASIEMVGTAAGECKDPQTMVPKAINSVIWRIGLF 267

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1153953867 244 FIGSIAVVVTLLPWNSANILKSPFVAVLEHIGIPAAAQIMNFIVLTAVLSCLNSGLYTNSRMLFSMAERGDAPKAFLKLN 323
Cdd:PRK15049  268 YVGSVVLLVMLLPWSAYQAGQSPFVTFFSKLGVPYIGSIMNIVVLTAALSSLNSGLYCTGRILRSMAMGGSAPSFMAKMS 347

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1153953867 324 SSGVPVRAVLFGTFFAYIGVVFSYISPDKVFLFLVNASGGIALLVYLVIAISHLKIRKKMGRVEQQNLKVKMWFFPYVTY 403
Cdd:PRK15049  348 RQHVPYAGILATLVVYVVGVFLNYLVPSRVFEIVLNFASLGIIASWAFIIVCQMRLRKAIKEGKAADVSFKLPGAPFTSW 427


                  ..
gi 1153953867 404 VT 405
Cdd:PRK15049  428 LT 429
PotE COG0531
Serine transporter YbeC, amino acid:H+ symporter family [Amino acid transport and metabolism];
1-401 1.83e-49

Serine transporter YbeC, amino acid:H+ symporter family [Amino acid transport and metabolism];


Pssm-ID: 440297 [Multi-domain]  Cd Length: 438  Bit Score: 174.70  E-value: 1.83e-49
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1153953867   1 MDKNLKKDLKIRHITMISIGGVIGAGLFVGSGAVVHSAGPGSIISYALAGLLVVFVMRMLGEMAAINPTSGSFATYAREA 80
Cdd:COG0531     5 ESSELKRKLGLFDLVALGVGAIIGAGIFVLPGLAAGLAGPAAILAWLIAGLLALLVALSYAELASAFPRAGGAYTYARRA 84

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1153953867  81 IGPWAGYTIGWLYWFFWVIVIAIEATAGAGIIQYWIPEIPLWLLSLILTILLTLTNVFSVKSFGEFEYWFSFIKVISIVL 160
Cdd:COG0531    85 LGPLLGFLAGWALLLSYVLAVAAVAVAFGGYLSSLFPAGGSVLIALVLILLLTLLNLRGVKESAKVNNILTVLKLLVLLL 164

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1153953867 161 FLCLGLAVILGFVPGTEAPGTSnlvgqggfmpnGISSVLLGITVVIFSFMGSEIVAVAAGESAEPVKAVKTATNSVIWRI 240
Cdd:COG0531   165 FIVVGLFAFDPANFTPFLPAGG-----------GLSGVLAALALAFFAFTGFEAIANLAEEAKNPKRNIPRAIILSLLIV 233

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1153953867 241 LVFFIGSIAVVVTLLPWNSANILKSPFVAVLEHIGIPAAAQIMNFIVLTAVLSCLNSGLYTNSRMLFSMAERGDAPKAFL 320
Cdd:COG0531   234 GVLYILVSLALTGVVPYDELAASGAPLADAAEAVFGPWGAILIALGALLSLLGALNASILGASRLLYAMARDGLLPKVFA 313

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1153953867 321 KLNSS-GVPVRAVLFGTFFAYIGVVFSYISpdkvFLFLVNASGGIALLVYLVIAISHLKIRKKMGRVEqQNLKVKMWFFP 399
Cdd:COG0531   314 KVHPRfGTPVNAILLTGVIALLLLLLGAAS----FTALASLASVGVLLAYLLVALAVIVLRRRRPDLP-RPFRVPLPLIP 388


                  ..
gi 1153953867 400 YV 401
Cdd:COG0531   389 IL 390
AA_permease_2 pfam13520
Amino acid permease;
15-382 3.21e-22

Amino acid permease;


Pssm-ID: 404414 [Multi-domain]  Cd Length: 427  Bit Score: 98.54  E-value: 3.21e-22
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1153953867  15 TMISIGGVIGAGLFVGSgaVVHSAGPGSIISYALAGLLVVFVMRM-LGEMAAINPTSGSFATYAREAIGPWAGYTIGWLY 93
Cdd:pfam13520   7 FALVIGSVIGSGIFVAP--LVASGGPALIVWGWIAAIIFSLAVGLvYAELSSALPRSGGIYVYLENAFGKFVAFLAGWSN 84

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1153953867  94 WFFWVIVIAIEATAGAGIIQYWIPEI------PLWLLSLILTILLTLTNVFSVKSFGEFEYWFSFIKVISIVLFLclgla 167
Cdd:pfam13520  85 WFAYVLGLASSASVAASYLLSALGPDlvpttwLTYGIAIAILIIFAIINIRGVRESAKIQNILGILKLLLPLILI----- 159

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1153953867 168 VILGFVPGTEAPGTSNLVGQGGFMPNGISSVLLGITVVIFSFMGSEIVAVAAGESAEpvKAVKTATNSVIWRILVFFIGS 247
Cdd:pfam13520 160 IILGLVTADGGGFNLLSGEWHTFFPDGWPGVFAGFLGVLWSFTGFESAANVSEEVKK--RNVPKAIFIGVIIVGVLYILV 237

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1153953867 248 IAVVVTLLPWNSANILK---SPFVAVLEHIGIPAAAQIMNFIVLTAVLSCLNSGLYTNSRMLFSMAERGDAP--KAFLKL 322
Cdd:pfam13520 238 NIAFFGVVPDDEIALSSglgQVAALLFQAVGGKWGAIIVVILLALSLLGAVNTAIVGASRLLYALARDGVLPfsRFFAKV 317

                         330       340       350       360       370       380
                  ....*....|....*....|....*....|....*....|....*....|....*....|
gi 1153953867 323 NSSGVPVRAVLFGTFFAYIGVVFSYISPdKVFLFLVNASGGIALLVYLVIAISHLKIRKK 382
Cdd:pfam13520 318 NKFGSPIRAIILTAILSLILLLLFLLSP-AAYNALLSLSAYGYLLSYLLPIIGLLILRKK 376
2A0303 TIGR00906
cationic amino acid transport permease; [Transport and binding proteins, Amino acids, peptides ...
 2-389 9.62e-21

cationic amino acid transport permease; [Transport and binding proteins, Amino acids, peptides and amines]


Pssm-ID: 273330 [Multi-domain]  Cd Length: 557  Bit Score: 94.88  E-value: 9.62e-21
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1153953867   2 DKNLKKDLKIRHITMISIGGVIGAGLFVGSGAVVHS-AGPGSIISYALAGLLVVFVMRMLGEMAAINPTSGSFATYAREA 80
Cdd:TIGR00906  23 ESKMKRCLTTWDLMALGIGSTIGAGIYVLTGEVARNdSGPAIVLSFLISGLAAVLSGFCYAEFGARVPKAGSAYLYSYVT 102

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1153953867  81 IGPWAGYTIGWLYWFFWVIVIAIEATAGAG----IIQYWIPEIPLWLLSLILTILLTLTNVFSV---------KSFG-EF 146
Cdd:TIGR00906 103 VGELWAFITGWNLILEYVIGTAAVARSWSAyfdeLLNKQIGQFRRTYFKLNYDGLAEYPDFFAVclilllavlLSFGvKE 182

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1153953867 147 EYWFSFIKVISIVLFLCLglAVILGFVPGTEAP-GTSNLVGQGGFMPNGISSVLLGITVVIFSFMGSEIVAVAAGESAEP 225
Cdd:TIGR00906 183 SAWVNKIFTAINILVLLF--VIIAGFTKADVANwSITEEKGAGGFMPYGFTGVLSGAATCFFAFIGFDAIATTGEEVKNP 260

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1153953867 226 VKAVKTATNSVIWRILVFFIGSIAVVVTLLPWNSANIlKSPFVAVLEHIGIPAAAQIMNFIVLTAVLSCLNSGLYTNSRM 305
Cdd:TIGR00906 261 QRAIPIGIVTSLLVCFVAYFLMSAALTLMMPYYLLDP-DAPFPVAFEYVGWDPAKYIVAVGALCGMSTSLLGGMFPLPRV 339

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1153953867 306 LFSMAERGDAPKAFLKLNS-SGVPVRAVlfgtffayigVVFSYISPDKVFLF----LVNASGGIALLVYLVIAISHLKIR 380
Cdd:TIGR00906 340 IYAMARDGLLFKWLAQINSkTKTPINAT----------VVSGAIAALMAFLFdlkaLVDLLSIGTLLAYSLVAACVLILR 409


                  ....*....
gi 1153953867 381 KKMGRVEQQ 389
Cdd:TIGR00906 410 YQPGLVYDQ 418
2A0302 TIGR00905
transporter, basic amino acid/polyamine antiporter (APA) family; This family includes several ...
 1-457 1.53e-12

transporter, basic amino acid/polyamine antiporter (APA) family; This family includes several families of antiporters that, rather commonly, are encoded next to decarboxylases that convert one of the antiporter substrates into the other. This arrangement allows a cycle that can remove proteins from the cytoplasm and thereby protect against acidic conditions. [Transport and binding proteins, Amino acids, peptides and amines]


Pssm-ID: 129983  Cd Length: 473  Bit Score: 69.32  E-value: 1.53e-12
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1153953867   1 MDKNLKKDLKIRHITMISIGGVIGAGLFVGSGAVVHSAGPG-SIISYALAG---LLVVFVMRMLGEMaaiNP-TSGSFAT 75
Cdd:TIGR00905   1 MSEAKSKKLGLFALTALVIGSMIGSGIFSLPQNLASVAGPGaVIIGWIITGvgmLALAFVFAILATK---KPeLDGGIYA 77

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1153953867  76 YAREAIGPWAGYTIGWLYWFFWVIVIAIEATAGAGIIQYWIPEIPLWLLSLILTILLTLTNVFSVKSFGEFEyWFSFIKV 155
Cdd:TIGR00905  78 YAREGFGPYIGFMSGWGYWLSAWIGNVAYAVLLFSALGYFFPLFGSGNPVPSILGASVLLWVFTFLVLRGVR-QAAFINT 156

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1153953867 156 ISIVLFLC-LGLAVILGFVPGTEAPGTSNLVGQGGFMPNGISSVLLG-ITVVIFSFMGSEiVAVAAGESAEPVKAVKTAT 233
Cdd:TIGR00905 157 ITTIAKLIpLFLFIIIGWFWFKLDLFTADFWGHDVPSLGSVFSQVKNtMLVTLWVFIGIE-GAVVSSGRAKNKSDVGKAT 235

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1153953867 234 nsVIWRILVffiGSIAVVVTLLPWNS------ANILKSPFVAVLEHIGIPAAAQIMNFIVLTAVLSCLNSGLYTNSRMLF 307
Cdd:TIGR00905 236 --VLGTLGA---LVIYILITLLSLGVlpqqelANLPNPSMAAVLEMIVGKWGAVLISLGLIISVLGSLLSWTMLAAEVPF 310

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1153953867 308 SMAERGDAPKAFLKLNSSGVPVRAVLFGTFFAYIgVVFSYISPDKVFLFLVNASGGIALLVYLVIAISHLKIRKKMGRVE 387
Cdd:TIGR00905 311 SAAKDGLFPKIFGRVNKNGAPSVALLLTNILIQL-FLLLTLLTSSAYNVLVSLAVVMILVPYLLSAAYLLKLAKVGTYPK 389

                         410       420       430       440       450       460       470
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1153953867 388 QQNLKVKMWFFPYVTYVTIAAIIAVLIAMlaieslrsqaLLTMLVTVLIIISYFIFNRNKNSTVLNTKSK 457
Cdd:TIGR00905 390 IKNRKALIVGVIACVYSIWLLYAAGLKYL----------LLGFILYAPGIIFYGRARKERGKHVFNKKEI 449
frlA PRK11357
amino acid permease;
5-323 1.02e-10

amino acid permease;


Pssm-ID: 183096 [Multi-domain]  Cd Length: 445  Bit Score: 63.34  E-value: 1.02e-10
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1153953867   5 LKKDLKIRHITMISIGGVIGAGLFVGSGAVVHSAGPG--SIISYALAGLLVVFVMRMLGEMAAINPTSGSFATYAREAIG 82
Cdd:PRK11357    6 LQRKLGFWAVLAIAVGTTVGSGIFVSVGEVAKAAGTPwlTVLAFVIGGLIVIPQMCVYAELSTAYPENGADYVYLKNAGS 85

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1153953867  83 PWAGYTIGWL-YWFFWVIVIAIEATAGAGIIQYWIPEIPLWLLSLILTILLT--LTNVFSVKSFGEFEYWFSFIKVISIV 159
Cdd:PRK11357   86 RPLAFLSGWAsFWANDAPSLSIMALAIVSNLGFLTPIDPLLGKFIAAGLIIAfmLLHLRSVEGGAAFQTLITIAKIIPFT 165

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1153953867 160 LFLCLGLAVILGFVPGteAPGTSNLVGQGGFMpngisSVLLGITVVIFSFMGSEIVAVAAGESAEPVKAVKTATNSVIWR 239
Cdd:PRK11357  166 IVIGLGIFWFKAENFA--APTTTAIGATGSFM-----ALLAGISATSWSYTGMASICYMTGEIKNPGKTMPRALIGSCLL 238

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1153953867 240 ILVFFIGSIAVVVTLLPWNSANILKSPFVAVLEHIGI--PAAAQIMNFIVLTAVLSCLNSGLYTNSRMLFSMAERGDAPK 317
Cdd:PRK11357  239 VLVLYTLLALVISGLMPFDKLANSETPISDALTWIPAlgSTAGIFVAITAMIVILGSLSSCVMYQPRLEYAMAKDNLFFK 318


                  ....*.
gi 1153953867 318 AFLKLN 323
Cdd:PRK11357  319 CFGHVH 324
PRK10644 PRK10644
arginine/agmatine antiporter;
21-375 3.31e-10

arginine/agmatine antiporter;


Pssm-ID: 182613 [Multi-domain]  Cd Length: 445  Bit Score: 61.73  E-value: 3.31e-10
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1153953867  21 GVIGAGLFV-----GSGAVVHSAGPGSIISYALAGLLVVFVMRML-----GEMAAINPTSGSFATYAREAIGPWAGYTIG 90
Cdd:PRK10644   11 GLIPVTLMVagnimGSGVFLLPANLASTGGIAIYGWLVTIIGALGlsmvyAKMSSLDPSPGGSYAYARRCFGPFLGYQTN 90

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1153953867  91 WLYWFF-WVIVIAIeATAGAGIIQYWIP----EIPLWLLSLILTILLTLTNVFSVKSFGEFEYWFSFIKVISIVlflclG 165
Cdd:PRK10644   91 VLYWLAcWIGNIAM-VVIGVGYLSYFFPilkdPLVLTITCVVVLWIFVLLNIVGPKMITRVQAVATVLALIPIV-----G 164

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1153953867 166 LAVILGF-VPGTEAPGTSNLVGQGGFmpNGISSVLlgiTVVIFSFMGSEIVAVAAGESAEPVKAVKTATNSVIWRILVFF 244
Cdd:PRK10644  165 IAVFGWFwFRGETYMAAWNVSGLGTF--GAIQSTL---NVTLWSFIGVESASVAAGVVKNPKRNVPIATIGGVLIAAVCY 239

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1153953867 245 IGSIAVVVTLLPWNSANILKSPFV-AVLEHIGIPAAAqimnFIVLTAVLSCLNS-GLYT--NSRMLFSMAERGDAPKAFL 320
Cdd:PRK10644  240 VLSSTAIMGMIPNAALRVSASPFGdAARMALGDTAGA----IVSFCAAAGCLGSlGGWTllAGQTAKAAADDGLFPPIFA 315

                         330       340       350       360       370
                  ....*....|....*....|....*....|....*....|....*....|....*..
gi 1153953867 321 KLNSSGVPVRAVLFGTFFAYIgVVFSYISPD--KVFLFLVNASGGIALLVYLVIAIS 375
Cdd:PRK10644  316 RVNKAGTPVAGLLIVGVLMTI-FQLSSISPNasKEFGLVSSVSVIFTLVPYLYTCAA 371
2A0308 TIGR00911
L-type amino acid transporter; [Transport and binding proteins, Amino acids, peptides and ...
 5-316 5.08e-08

L-type amino acid transporter; [Transport and binding proteins, Amino acids, peptides and amines]


Pssm-ID: 273332 [Multi-domain]  Cd Length: 501  Bit Score: 55.14  E-value: 5.08e-08
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1153953867   5 LKKDLKIRHITMISIGGVIGAGLFVGSGAVVHSAG-PG-SIISYALAGLLVVFVMRMLGEMAAINPTSGSFATYAREAIG 82
Cdd:TIGR00911  40 LKKEITLLSGVGIIVGTIIGSGIFVSPKGVLKNAGsVGlALIMWAVCGIFSIVGALVYAELGTTIPKSGGEYNYILEVFG 119

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1153953867  83 PWAGYTIgwlywfFWVIVIAIEATAGAGI-------------IQYWIPEIPLWLLSLILTILLTLTNVFSVKSFGEFEYW 149
Cdd:TIGR00911 120 PLLAFLR------LWIELLVIRPGSQAVNalnfaiyiltpvfPDCEVPEWAIRLVAVLCVLLLTLVNCLSVKWATRVQDI 193

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1153953867 150 FSFIKVISIVLFLCLGLAVILG-----FVPGTEAPGTSNLVGQggfmpngissVLLGITVVIFSFMGSEIVAVAAGESAE 224
Cdd:TIGR00911 194 FTACKLLALLLIIITGWVQLGKggvesLNPKNAFEGTETSAGG----------IVLAFYSGIWAYGGWNYLNFVTEEVKN 263

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1153953867 225 PVKAVKTAT-NSVIWRILVFFIGSIAVVVTLLPwnsANILKSPFVAVL---EHIGIpaAAQIMNFIVLTAVLSCLNSGLY 300
Cdd:TIGR00911 264 PYRTLPIAIiISMPIVTFIYVLTNIAYFTVLSP---EELLASLAVAVDfgeRLLGV--MSWAMPALVGLSCFGSVNGSLF 338

                         330
                  ....*....|....*.
gi 1153953867 301 TNSRMLFSMAERGDAP 316
Cdd:TIGR00911 339 SSSRLFFVGGREGHLP 354
Spore_permease pfam03845
Spore germination protein;
9-254 1.99e-03

Spore germination protein;


Pssm-ID: 281794  Cd Length: 321  Bit Score: 40.31  E-value: 1.99e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1153953867   9 LKIRHITMISIGGVIGAGLFVGSGAVVHSAGPGSIISYALAGLLVVFVMRMLGEMAAINPtSGSFATYAREAIGPWAGYT 88
Cdd:pfam03845   2 ISTKQTFFLIVSFQLGSGILTLPRSVAEQAGPDGWISVLLAGIIGLILVYLYYYLLKKFP-EKTLIEYMKKILGKWLGSL 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1153953867  89 IGWLYWFFWVIVIAIEATAGAGIIQYW-IPEIPLWLLSLILTILL--TLTNVFSVKSFGEFEYWFSFIKVISIVLFLCLG 165
Cdd:pfam03845  81 LSILFMLYFLYIAGRVLRIFSEVIQFFlLPDTPTWIIILTLLLVSlyLISKGIEVLAREFCFIIPILLIILLLILLFSLK 160

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1153953867 166 LAVILGFVPgteapgtsnlvgqggFMPNGISSVLLGITVVIFSFMGSEIVAVAAGESAEPVKAVKTATNSVIWRILVFFI 245
Cdd:pfam03845 161 IAHIDNLRP---------------VLGNGISPVLKGLKVTSLPFGGFEILLMLYPFMKDKKKSKKAALLGVGISGLLYTL 225


                  ....*....
gi 1153953867 246 GSIAVVVTL 254
Cdd:pfam03845 226 TTIIVIGVL 234
PRK11021 PRK11021
putative transporter; Provisional
 24-386 9.65e-03

putative transporter; Provisional


Pssm-ID: 236823 [Multi-domain]  Cd Length: 410  Bit Score: 38.35  E-value: 9.65e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1153953867  24 GAGLFVGSGAVVHSAGPGSIISYALAGLLVVFVMRMLGEMAAINPTSGSFATYAREAIGPWAGYTIGWLywFFWVIVI-- 101
Cdd:PRK11021   16 GTGVFAVPALAALVAGNNSLWAWPLLILLIFPIAIVFARLGRHFPHAGGPAHFVGMAFGPRLGRVTGWL--FLSVIPVgl 93

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1153953867 102 --AIEATAGAGIIQYWIPEIPLWLLSLILTILLTLTNVFSVKSFGEFEYWFSFIKVISIVLFLCLGlAVILGFVPGTeAP 179
Cdd:PRK11021   94 paALQIAAGFGQALFGWSSWQLLLAELLTLALLWLLNLRGASSSANLQTVIALLIVALVVAIWWAG-DIKPADIPFP-AP 171

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1153953867 180 GTSNlvgqggfmpngISSVLLGITVVIFSFMGSEIVAVAAGESAEPVKAVKTATnsviwRILVFFIGSI----AVVVTLL 255
Cdd:PRK11021  172 GSIE-----------WSGLFAALGVMFWCFVGIEAFAHLASEFKNPERDFPRAL-----MIGLLLAGLVywacTVVVLHF 235

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1153953867 256 PWNSANILKSP-FVAVLEHIGIPAAAQIMNFIVLTAVLSCLNsgLYTNS--RMLFSMAERGDAPKAFLKLNSSGVPVRAV 332
Cdd:PRK11021  236 PAYGDKQAAAAsLPGIFVQLFGGYALWVICVIGYLACFASVN--IYTQSfaRLVWSQAREGRPPSYLARLSARGVPVNAL 313

                         330       340       350       360       370
                  ....*....|....*....|....*....|....*....|....*....|....
gi 1153953867 333 LFGTFFAYIGVVFSYISPDKVFLFLVNASgGIALLVYLVIAISHLKIRKKMGRV 386
Cdd:PRK11021  314 NAVLGCCAVSILLIYALGLNLEALIAYAN-GIFVLIYLLCMLAACKLLKGRYRP 366
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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