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Conserved domains on  [gi|1159754414|ref|WP_079301305|]
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signal peptidase II [Helicobacter pylori]

Protein Classification

signal peptidase II( domain architecture ID 2234)

signal peptidase II specifically catalyzes the removal of signal peptides from membrane prolipoproteins; it belongs to the peptidase family A8

EC:  3.4.23.36
Gene Ontology:  GO:0004190|GO:0006508|GO:0016787|GO:0016020
MEROPS:  A8
PubMed:  31214988

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
PRK14791 super family cl00458
lipoprotein signal peptidase; Provisional
 1-155 1.10e-36

lipoprotein signal peptidase; Provisional


The actual alignment was detected with superfamily member TIGR00077:

Pssm-ID: 469775 [Multi-domain]  Cd Length: 166  Bit Score: 124.01  E-value: 1.10e-36
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1159754414   1 MLNTTQKSLLVFIGVFFLIFGVDQAIKHAILEGFRYESL-------VIDIVLVFNKGVAFSLLSFLEG---GLKYLQILL 70
Cdd:TIGR00077   1 MSQSLSKGLLLYWLVAILFIGFDQLSKYLVLQNFDLGETyfvafsgVFNITYVRNTGAAFSLLADQGGqvyFLKGLAIAI 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1159754414  71 ILGLFIFLMRQKELFKSHAIEFGMVFGAGVSNVLDRFVHGGVVDYVYYHYGFD-FAIFNFADVMIDVGVGVLLLRQFFFK 149
Cdd:TIGR00077  81 SLGLFVFLLRYKELFKITNIAFGLIFGGALGNFIDRLVRGGVVDFFDFYFGNYhFPIFNFADSSICIGVILLLLYFFFPK 160


                  ....*.
gi 1159754414 150 QKQNKI 155
Cdd:TIGR00077 161 RKKKKD 166
 
Name Accession Description Interval E-value
lspA TIGR00077
lipoprotein signal peptidase; Alternate name: lipoprotein signal peptidase [Protein fate, ...
 1-155 1.10e-36

lipoprotein signal peptidase; Alternate name: lipoprotein signal peptidase [Protein fate, Protein and peptide secretion and trafficking]


Pssm-ID: 272893 [Multi-domain]  Cd Length: 166  Bit Score: 124.01  E-value: 1.10e-36
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1159754414   1 MLNTTQKSLLVFIGVFFLIFGVDQAIKHAILEGFRYESL-------VIDIVLVFNKGVAFSLLSFLEG---GLKYLQILL 70
Cdd:TIGR00077   1 MSQSLSKGLLLYWLVAILFIGFDQLSKYLVLQNFDLGETyfvafsgVFNITYVRNTGAAFSLLADQGGqvyFLKGLAIAI 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1159754414  71 ILGLFIFLMRQKELFKSHAIEFGMVFGAGVSNVLDRFVHGGVVDYVYYHYGFD-FAIFNFADVMIDVGVGVLLLRQFFFK 149
Cdd:TIGR00077  81 SLGLFVFLLRYKELFKITNIAFGLIFGGALGNFIDRLVRGGVVDFFDFYFGNYhFPIFNFADSSICIGVILLLLYFFFPK 160


                  ....*.
gi 1159754414 150 QKQNKI 155
Cdd:TIGR00077 161 RKKKKD 166
LspA COG0597
Lipoprotein signal peptidase [Cell wall/membrane/envelope biogenesis, Intracellular ...
 10-152 3.28e-28

Lipoprotein signal peptidase [Cell wall/membrane/envelope biogenesis, Intracellular trafficking, secretion, and vesicular transport];


Pssm-ID: 440362 [Multi-domain]  Cd Length: 151  Bit Score: 101.72  E-value: 3.28e-28
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1159754414  10 LVFIGVFFLIFGVDQAIKHAILEGFRYESLV------IDIVLVFNKGVAFSLLSFLEGGLKYLQILLILGLFIFLMRQKE 83
Cdd:COG0597     1 LLFLLLALLVLLLDQLTKLWVVANLALGESIpviggfFNLTYVENTGAAFGLLAGAGWLLIILALVVLVGLLYYLRRLKK 80

                          90       100       110       120       130       140       150
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1159754414  84 LFKSHAIEFGMVFGAGVSNVLDRFVHGGVVDYVYYHYG-FDFAIFNFADVMIDVGVGVLLLRQFFFKQKQ 152
Cdd:COG0597    81 RSKLLALALGLILGGALGNLIDRLFYGYVVDFIDFHIGgWHWPIFNVADIAITIGVILLLLDSLFGKKKK 150
Peptidase_A8 pfam01252
Signal peptidase (SPase) II;
15-147 1.03e-20

Signal peptidase (SPase) II;


Pssm-ID: 460136 [Multi-domain]  Cd Length: 140  Bit Score: 82.13  E-value: 1.03e-20
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1159754414  15 VFFLIFGVDQAIKHAILEGFRYESL------VIDIVLVFNKGVAFSLLSFLEGGLKYLQILLILGLFIFLMRQKELFKSH 88
Cdd:pfam01252   1 IALLLLLLDQLTKLLIVKNLKLGEPievipgFFNLTYVENTGAAFGLLAGQRWLLIILTLVAIILLIYLLLKLKKKSRLL 80

                          90       100       110       120       130       140
                  ....*....|....*....|....*....|....*....|....*....|....*....|
gi 1159754414  89 AIEFGMVFGAGVSNVLDRFVHGGVVDYVY-YHYGFDFAIFNFADVMIDVGVGVLLLRQFF 147
Cdd:pfam01252  81 RIALALILGGALGNLIDRLFYGYVVDFIDfHIGFINFPVFNVADIAITVGVILLIIDLLF 140
PRK14779 PRK14779
lipoprotein signal peptidase; Provisional
 7-154 9.59e-11

lipoprotein signal peptidase; Provisional


Pssm-ID: 184818  Cd Length: 159  Bit Score: 56.64  E-value: 9.59e-11
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1159754414   7 KSLLVFIGVFFLIFGVDQAIKHAILEGFRYESLVI----DIVLVFNKGVAFSLLSFLEGGLKYLQILL-----ILGLFIF 77
Cdd:PRK14779    3 KKSLAYLGTFFLVLVLDLITKYLAEKYLFDKDISVipflDLVLVYNKGVAFGLLSEAPDFIRLPILLLtpiiaLIITFLY 82

                          90       100       110       120       130       140       150
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1159754414  78 LMRQKElfKSHAIEFGMVFGAGVSNVLDRFVHGGVVDYVYYHYG-FDFAIFNFADVMIDVGVGVLLLRQFFFKQKQNK 154
Cdd:PRK14779   83 ALKSND--KLSNLSMGLIGGGALGNLYDRFFLGQVRDFIDIYIGdFHWPAFNIADASISIGIALFILYEHFFKKRKKT 158
 
Name Accession Description Interval E-value
lspA TIGR00077
lipoprotein signal peptidase; Alternate name: lipoprotein signal peptidase [Protein fate, ...
 1-155 1.10e-36

lipoprotein signal peptidase; Alternate name: lipoprotein signal peptidase [Protein fate, Protein and peptide secretion and trafficking]


Pssm-ID: 272893 [Multi-domain]  Cd Length: 166  Bit Score: 124.01  E-value: 1.10e-36
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1159754414   1 MLNTTQKSLLVFIGVFFLIFGVDQAIKHAILEGFRYESL-------VIDIVLVFNKGVAFSLLSFLEG---GLKYLQILL 70
Cdd:TIGR00077   1 MSQSLSKGLLLYWLVAILFIGFDQLSKYLVLQNFDLGETyfvafsgVFNITYVRNTGAAFSLLADQGGqvyFLKGLAIAI 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1159754414  71 ILGLFIFLMRQKELFKSHAIEFGMVFGAGVSNVLDRFVHGGVVDYVYYHYGFD-FAIFNFADVMIDVGVGVLLLRQFFFK 149
Cdd:TIGR00077  81 SLGLFVFLLRYKELFKITNIAFGLIFGGALGNFIDRLVRGGVVDFFDFYFGNYhFPIFNFADSSICIGVILLLLYFFFPK 160


                  ....*.
gi 1159754414 150 QKQNKI 155
Cdd:TIGR00077 161 RKKKKD 166
LspA COG0597
Lipoprotein signal peptidase [Cell wall/membrane/envelope biogenesis, Intracellular ...
 10-152 3.28e-28

Lipoprotein signal peptidase [Cell wall/membrane/envelope biogenesis, Intracellular trafficking, secretion, and vesicular transport];


Pssm-ID: 440362 [Multi-domain]  Cd Length: 151  Bit Score: 101.72  E-value: 3.28e-28
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1159754414  10 LVFIGVFFLIFGVDQAIKHAILEGFRYESLV------IDIVLVFNKGVAFSLLSFLEGGLKYLQILLILGLFIFLMRQKE 83
Cdd:COG0597     1 LLFLLLALLVLLLDQLTKLWVVANLALGESIpviggfFNLTYVENTGAAFGLLAGAGWLLIILALVVLVGLLYYLRRLKK 80

                          90       100       110       120       130       140       150
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1159754414  84 LFKSHAIEFGMVFGAGVSNVLDRFVHGGVVDYVYYHYG-FDFAIFNFADVMIDVGVGVLLLRQFFFKQKQ 152
Cdd:COG0597    81 RSKLLALALGLILGGALGNLIDRLFYGYVVDFIDFHIGgWHWPIFNVADIAITIGVILLLLDSLFGKKKK 150
Peptidase_A8 pfam01252
Signal peptidase (SPase) II;
15-147 1.03e-20

Signal peptidase (SPase) II;


Pssm-ID: 460136 [Multi-domain]  Cd Length: 140  Bit Score: 82.13  E-value: 1.03e-20
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1159754414  15 VFFLIFGVDQAIKHAILEGFRYESL------VIDIVLVFNKGVAFSLLSFLEGGLKYLQILLILGLFIFLMRQKELFKSH 88
Cdd:pfam01252   1 IALLLLLLDQLTKLLIVKNLKLGEPievipgFFNLTYVENTGAAFGLLAGQRWLLIILTLVAIILLIYLLLKLKKKSRLL 80

                          90       100       110       120       130       140
                  ....*....|....*....|....*....|....*....|....*....|....*....|
gi 1159754414  89 AIEFGMVFGAGVSNVLDRFVHGGVVDYVY-YHYGFDFAIFNFADVMIDVGVGVLLLRQFF 147
Cdd:pfam01252  81 RIALALILGGALGNLIDRLFYGYVVDFIDfHIGFINFPVFNVADIAITVGVILLIIDLLF 140
PRK14779 PRK14779
lipoprotein signal peptidase; Provisional
 7-154 9.59e-11

lipoprotein signal peptidase; Provisional


Pssm-ID: 184818  Cd Length: 159  Bit Score: 56.64  E-value: 9.59e-11
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1159754414   7 KSLLVFIGVFFLIFGVDQAIKHAILEGFRYESLVI----DIVLVFNKGVAFSLLSFLEGGLKYLQILL-----ILGLFIF 77
Cdd:PRK14779    3 KKSLAYLGTFFLVLVLDLITKYLAEKYLFDKDISVipflDLVLVYNKGVAFGLLSEAPDFIRLPILLLtpiiaLIITFLY 82

                          90       100       110       120       130       140       150
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1159754414  78 LMRQKElfKSHAIEFGMVFGAGVSNVLDRFVHGGVVDYVYYHYG-FDFAIFNFADVMIDVGVGVLLLRQFFFKQKQNK 154
Cdd:PRK14779   83 ALKSND--KLSNLSMGLIGGGALGNLYDRFFLGQVRDFIDIYIGdFHWPAFNIADASISIGIALFILYEHFFKKRKKT 158
PRK14770 PRK14770
lipoprotein signal peptidase; Provisional
 15-152 9.62e-11

lipoprotein signal peptidase; Provisional


Pssm-ID: 173231  Cd Length: 167  Bit Score: 56.75  E-value: 9.62e-11
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1159754414  15 VFFLIFGVDQAIKHAILEGF---RYESL----VIDIVLVFNKGVAFSLLSFLEGGLKYLQILLILGLFIFLM----RQKE 83
Cdd:PRK14770   16 LLVAVLLLDQASKYWILYGLdlpDRGSVpvlpFLNFTMVWNHAVTFGMLGGLGGIGRVVFSAVSLAAVLLLGvwltRTPR 95

                          90       100       110       120       130       140       150
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1159754414  84 LFKshAIEFGMVFGAGVSNVLDRFVHGGVVDYVYYH-YGFDFAIFNFADVMIDVGVGVLLLRQFFFKQKQ 152
Cdd:PRK14770   96 PLV--AAALGAIMGGAIGNVIDRMRYGAVVDFLHAHaFGWSWYVFNLADAAIDCGVAVLLIDSLLARRQA 163
PRK14785 PRK14785
lipoprotein signal peptidase; Provisional
 45-154 5.68e-09

lipoprotein signal peptidase; Provisional


Pssm-ID: 184820  Cd Length: 171  Bit Score: 52.13  E-value: 5.68e-09
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1159754414  45 LVFNKGVAFSLLSFLEG-------GLKYLQILLILGLFIFLMRQKELFkshAIEFGMVFGAGVSNVLDRFVHGGVVDYVY 117
Cdd:PRK14785   56 LAYNYGAAFSFLADAGGwqkwffaGLALIMSLFLIVYLKKAPRQAKLL---SLGLALVLGGAIGNLIDRLLHGHVIDFIH 132

                          90       100       110
                  ....*....|....*....|....*....|....*....
gi 1159754414 118 YHYG--FDFAIFNFADVMIDVGVGVLLLRQFFFKQKQNK 154
Cdd:PRK14785  133 VHYAdvWHYPIFNIADIGICVGVALIVIDMLFLEKKRNA 171
PRK14781 PRK14781
lipoprotein signal peptidase; Provisional
 18-146 2.52e-08

lipoprotein signal peptidase; Provisional


Pssm-ID: 237815  Cd Length: 153  Bit Score: 50.19  E-value: 2.52e-08
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1159754414  18 LIFGVDQAIK---HAILEGFRYESL-VIDIVLVFNKGVAFSLLSFLEGG--LKYLQILLILGLFIFLMRQKELFKSHAIE 91
Cdd:PRK14781   12 LLAGADLLVKaqaEAGLSRGEVIDLgLINIRLLYNTGVAFSLGAGLPTWfvIAGTGLIIAALLWYLTSSAPKMSRLSRAG 91

                          90       100       110       120       130
                  ....*....|....*....|....*....|....*....|....*....|....*
gi 1159754414  92 FGMVFGAGVSNVLDRFVHGGVVDYVyyHYGFdFAIFNFADVMIDVGVGVLLLRQF 146
Cdd:PRK14781   92 AALLLGGAVGNFIDRLDGRGVVDYL--HSGW-FPTFNLADVFVTTGVALLVLGML 143
PRK14775 PRK14775
lipoprotein signal peptidase; Provisional
 7-153 4.12e-08

lipoprotein signal peptidase; Provisional


Pssm-ID: 237813  Cd Length: 170  Bit Score: 49.89  E-value: 4.12e-08
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1159754414   7 KSLLVFIGVFFLIFGVDQAIK---------HAILEGFRYESLVidivLVFNKGVAFSLLSFLEGG-LKYLQILLILGLFI 76
Cdd:PRK14775    2 KSKIVGVIAIVLVFALDQVSKayaidwysqSGATEVFKFCSLV----EVWNRGISFGMFGALESSnLIFTYVSLGVILML 77

                          90       100       110       120       130       140       150
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1159754414  77 FLMRQKELFKSHAIEFGMVFGAGVSNVLDRFVHGGVVDYVYYHYG-FDFAIFNFADVMIDVGVGVLLLRQFFFKQKQN 153
Cdd:PRK14775   78 FVLFVQSKCNKSTICMGVVIGGALGNLADRLRFGAVYDFISLHAGeFHWPAFNFADVCVTCGVICFLCLEVMYHAKAC 155
PRK14773 PRK14773
lipoprotein signal peptidase; Provisional
 94-153 6.47e-08

lipoprotein signal peptidase; Provisional


Pssm-ID: 173234  Cd Length: 192  Bit Score: 49.46  E-value: 6.47e-08
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1159754414  94 MVFGAGVSNVLDRFVHGGVVDYVYYHY----GFDFAIFNFADVMIDVGVGVLLLRQFFFKQKQN 153
Cdd:PRK14773  128 LVLGGAVGNFVDRLARGYVIDFIEWYWwnrpDIRWPTFNVADSLIVVGVAMLVLHPGSRKEAPR 191
PRK14790 PRK14790
lipoprotein signal peptidase; Provisional
 1-143 1.21e-06

lipoprotein signal peptidase; Provisional


Pssm-ID: 173251  Cd Length: 169  Bit Score: 45.62  E-value: 1.21e-06
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1159754414   1 MLNTTQKSLLVFIGVFFLIFGVDQAIKHAIL------EGFRYESLV---IDIVLVFNKGVAFSLLSflegGLKYLQILLI 71
Cdd:PRK14790    1 MKSLLQARWITPALVAATILALDQASKRWILatlgpvPMTKFIPLIgedIRLAYSHNTGIAFSLFD----GKSDILTVVA 76

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1159754414  72 LGLFIFLMRqkeLFKSH--------AIEFGMVFGAGVSNVLDRFVHGGVVDYVYYHYgfdFAIFNFADVMIDVGVGVLLL 143
Cdd:PRK14790   77 LVISLGAIY---LYRTQlpnrrlliQVAMGLILGGALGNVIDRIRLGYVVDFIQVGW---FPIFNLADSAITVGAALLML 150
PRK14789 PRK14789
lipoprotein signal peptidase; Provisional
 93-156 2.70e-06

lipoprotein signal peptidase; Provisional


Pssm-ID: 173250  Cd Length: 191  Bit Score: 45.03  E-value: 2.70e-06
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1159754414  93 GMVFGAGVSNVLDRFVHGGVVDYVYYHYgfdFAIFNFADVMIDVGVGVLLLRQFFFKQKQNKIK 156
Cdd:PRK14789   97 GMIFGGGLSNLVDRIRQGYVVDFIQFGW---WPVFNLADSAITIGVAALAFHIIFIGEEPAPTE 157
PRK14776 PRK14776
lipoprotein signal peptidase; Provisional
 18-153 3.36e-06

lipoprotein signal peptidase; Provisional


Pssm-ID: 173237  Cd Length: 170  Bit Score: 44.54  E-value: 3.36e-06
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1159754414  18 LIFGVDQAIKHAILEGFRYESLV-----IDIVLVFNKGVAFSLLSFLEGGLKYLQILLILGLFIFLMRQ--KELFKSHAI 90
Cdd:PRK14776   19 LLAASDQAVKWLVQQSMAYGEYVsvtpfFNWVHLWNTGAAFSLFANGGGWQRYFFIGIAVVVSIFLIKLilENRHKGEAI 98

                          90       100       110       120       130       140
                  ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1159754414  91 EFGMVFGAGVSNVLDRFVHGGVVD-YVYYHYGFDFAIFNFADVMIDVGVgVLLLRQFFFKQKQN 153
Cdd:PRK14776   99 AYSLILGGAMGNLIDRVFRGYVVDsFDFYWRDWHWPAFNLADIAIVLGA-LLFVSSSLLGKKAN 161
PRK14787 PRK14787
lipoprotein signal peptidase; Provisional
 92-143 2.42e-05

lipoprotein signal peptidase; Provisional


Pssm-ID: 173248  Cd Length: 159  Bit Score: 41.91  E-value: 2.42e-05
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1159754414  92 FGMVFGAGVSNVLDRFVHGGVVDYVYY--HYGFDFA-------IFNFADVMIDVGVGVLLL 143
Cdd:PRK14787   91 FGLILGGGIGNLIDRITSGRVVDFIYFdlYQGYIFGiwvslwpIFNIADSAITIGACMLLL 151
PRK14769 PRK14769
lipoprotein signal peptidase; Provisional
 19-143 3.88e-05

lipoprotein signal peptidase; Provisional


Pssm-ID: 173230  Cd Length: 156  Bit Score: 41.45  E-value: 3.88e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1159754414  19 IFGVD---QAIKHAILEGFRYESLVIDIVLVFNKGVAFSLLSFLEGG--LKYLQILLILGLFIFLMRQKELFKSHAIEFG 93
Cdd:PRK14769   15 IAGIDlgaKAWSERQLAGSSVDLGLLHLRLAFNSGVAFSMGDTLPVGviVAVTAVIVVALAVYAWRRAPTAGWVERIAGG 94

                          90       100       110       120       130
                  ....*....|....*....|....*....|....*....|....*....|
gi 1159754414  94 MVFGAGVSNVLDRFVHGGVVDYVyyHYGFdFAIFNFADVMIDVGVGVLLL 143
Cdd:PRK14769   95 AVIGGALANVVDRARDGLVTDYL--HTGW-WPTFNLADTFLVTGFAVIAL 141
PRK14791 PRK14791
lipoprotein signal peptidase; Provisional
 90-141 1.51e-03

lipoprotein signal peptidase; Provisional


Pssm-ID: 237817 [Multi-domain]  Cd Length: 146  Bit Score: 36.85  E-value: 1.51e-03
                          10        20        30        40        50
                  ....*....|....*....|....*....|....*....|....*....|...
gi 1159754414  90 IEFGMVFGAGVSNVLDRFVHGGVVDYVYYHYG-FDFAIFNFADVMIDVGVGVL 141
Cdd:PRK14791   86 ISLSLIISGAIGNLIDRIRYGYVVDFIDFHFKdYYFPVFNVADILVVVGTILL 138
PRK14777 PRK14777
lipoprotein signal peptidase; Provisional
 40-146 5.52e-03

lipoprotein signal peptidase; Provisional


Pssm-ID: 237814 [Multi-domain]  Cd Length: 184  Bit Score: 35.60  E-value: 5.52e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1159754414  40 VIDIVLVFNKGVAFSLLSFLEGGLKYLQILLILGLFIFLMRQKELfKSHAIEFGMVFGAGVSNVLDRFVHGGVVDYVYYH 119
Cdd:PRK14777   64 VLDWVLTFNTGAAWSLFSGSALPLALMRLLVGLGLLVYLLRRPQP-RFLTVVLSLIAAGAIGNAIDGLRFGRVTDMLHSP 142

                          90       100       110
                  ....*....|....*....|....*....|....*.
gi 1159754414 120 Y---------GFDFAIFNFADVMIDVGVGVLLLRQF 146
Cdd:PRK14777  143 AlsavtralgQGDFPIFNLADMCVVGGTLLLLFASF 178
PRK14772 PRK14772
lipoprotein signal peptidase; Provisional
 89-143 9.50e-03

lipoprotein signal peptidase; Provisional


Pssm-ID: 237812 [Multi-domain]  Cd Length: 190  Bit Score: 34.85  E-value: 9.50e-03
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1159754414  89 AIEFGMVFGAGVSNVLDR------FVHGGVVDYVYYHygfDFAIFNFADVMIDVGVGVLLL 143
Cdd:PRK14772  109 ALALGLLLGGALGNLTDRlfrepsFGMGHVVDFIQLP---NFAIFNIADSAVVSGVVIICL 166
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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