NCBI Home Page NCBI Site Search page NCBI Guide that lists and describes the NCBI resources
Conserved domains on  [gi|1175476886|ref|WP_082019693|]
View 

KUP/HAK/KT family potassium transporter [Berryella intestinalis]

Protein Classification

KUP/HAK/KT family potassium transporter( domain architecture ID 10497063)

KUP/HAK/KT family potassium transporter transports potassium into the cell; similar to potassium transporters Kup and HAK

Graphical summary

 Zoom to residue level

show extra options »

Show site features     Horizontal zoom: ×

List of domain hits

Name Accession Description Interval E-value
K_trans pfam02705
K+ potassium transporter; This is a family of K+ potassium transporters that are conserved ...
49-589 0e+00

K+ potassium transporter; This is a family of K+ potassium transporters that are conserved across phyla, having both bacterial (KUP), yeast (HAK), and plant (AtKT) sequences as members.


:

Pssm-ID: 426935  Cd Length: 534  Bit Score: 543.66  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1175476886  49 ALVALGVVYGDIGTSPLYVMKAIVNGNGGIEsLSQQTVIGALSLIIWTVTLITTVKYVLIALNADNKGEGGIFALYSLVR 128
Cdd:pfam02705   1 ALGALGVVYGDIGTSPLYVLKEIFSGHHGLP-PTEENVLGILSLIFWTLTLIVTVKYVIIVLRADNNGEGGIFALYALIR 79
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1175476886 129 KHYPQ-------LVGLAIVGGAALLADGILTPAVTITTAVEGLRTVEPiatffeGGQAHVAMVAIGIIAVLFGVQKAGTS 201
Cdd:pfam02705  80 PLSKSgrkarwlLVILGLIGAALLYGDGVITPAISVLSAVEGLEVASP------SLEPYVVPISVVILVGLFLIQRFGTE 153
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1175476886 202 AIGSVFGIVMSCWFAFLGIAGAIQLAGCPSVLAAVNPVHAIAFLFSSDNHaGFMVLGSVFLATTGAEALYSDMGHVGRAN 281
Cdd:pfam02705 154 KIGKLFGPIMLIWFLTLAVLGLYNIVQHPEVLKALNPYYAIDFLLRNGLA-GFFVLGAVFLAVTGAEALYADMGHFGKRP 232
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1175476886 282 IYASWP-LVKACLILCYLGQGAWLvsnIGDPQIAAipdmNPFFQMLDPSVRPLSVGLATAAAIIASQALITGSFTLASEA 360
Cdd:pfam02705 233 IRLAWFfVVFPALLLNYFGQGALL---LKNPEAVS----NPFFELVPEWLLWPMVVLATLATIIASQALISGAFSLTRQA 305
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1175476886 361 TRLDLMPHLHLKYPS-QEKGQVYIPRINLMLAIGCIAVVLFFRSSSAMEAAYGLAITVTMLMTTALMGVYL-WKHRGRRL 438
Cdd:pfam02705 306 IQLGYLPRLKIVHTSeKEEGQIYIPLVNWLLMIAVIAVVLGFKSSSNLAAAYGLAVTGTMLITTILLALVArLIWKWPLI 385
                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1175476886 439 LSAAFVATFASLETGFFLSSLSKFPHGGYVTVLIASLLAYVMVVWQRGTSI--ERSQADLLPLARYKAQIGRLSqdtrLP 516
Cdd:pfam02705 386 LVILFALFFLLIDLLFFGANLLKIPHGGWFPLLIGAILFTIMLTWRYGRKLlyERELENAVPLDEFLELLDKHP----VV 461
                         490       500       510       520       530       540       550
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1175476886 517 LVADNLVYISkpGRMGKVDRDVL--YSILDNRPKRARAYWLVDIVVSDDPFERSYAVESFGTDyLFRVRLNLGYK 589
Cdd:pfam02705 462 RVPGTAVFLS--GAPDGVPPALLhnLKHNKVLHERVIFLTIKTLDVPYVPPEERYEVEDLGPG-FYRVIARYGFM 533
 
Name Accession Description Interval E-value
K_trans pfam02705
K+ potassium transporter; This is a family of K+ potassium transporters that are conserved ...
49-589 0e+00

K+ potassium transporter; This is a family of K+ potassium transporters that are conserved across phyla, having both bacterial (KUP), yeast (HAK), and plant (AtKT) sequences as members.


Pssm-ID: 426935  Cd Length: 534  Bit Score: 543.66  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1175476886  49 ALVALGVVYGDIGTSPLYVMKAIVNGNGGIEsLSQQTVIGALSLIIWTVTLITTVKYVLIALNADNKGEGGIFALYSLVR 128
Cdd:pfam02705   1 ALGALGVVYGDIGTSPLYVLKEIFSGHHGLP-PTEENVLGILSLIFWTLTLIVTVKYVIIVLRADNNGEGGIFALYALIR 79
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1175476886 129 KHYPQ-------LVGLAIVGGAALLADGILTPAVTITTAVEGLRTVEPiatffeGGQAHVAMVAIGIIAVLFGVQKAGTS 201
Cdd:pfam02705  80 PLSKSgrkarwlLVILGLIGAALLYGDGVITPAISVLSAVEGLEVASP------SLEPYVVPISVVILVGLFLIQRFGTE 153
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1175476886 202 AIGSVFGIVMSCWFAFLGIAGAIQLAGCPSVLAAVNPVHAIAFLFSSDNHaGFMVLGSVFLATTGAEALYSDMGHVGRAN 281
Cdd:pfam02705 154 KIGKLFGPIMLIWFLTLAVLGLYNIVQHPEVLKALNPYYAIDFLLRNGLA-GFFVLGAVFLAVTGAEALYADMGHFGKRP 232
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1175476886 282 IYASWP-LVKACLILCYLGQGAWLvsnIGDPQIAAipdmNPFFQMLDPSVRPLSVGLATAAAIIASQALITGSFTLASEA 360
Cdd:pfam02705 233 IRLAWFfVVFPALLLNYFGQGALL---LKNPEAVS----NPFFELVPEWLLWPMVVLATLATIIASQALISGAFSLTRQA 305
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1175476886 361 TRLDLMPHLHLKYPS-QEKGQVYIPRINLMLAIGCIAVVLFFRSSSAMEAAYGLAITVTMLMTTALMGVYL-WKHRGRRL 438
Cdd:pfam02705 306 IQLGYLPRLKIVHTSeKEEGQIYIPLVNWLLMIAVIAVVLGFKSSSNLAAAYGLAVTGTMLITTILLALVArLIWKWPLI 385
                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1175476886 439 LSAAFVATFASLETGFFLSSLSKFPHGGYVTVLIASLLAYVMVVWQRGTSI--ERSQADLLPLARYKAQIGRLSqdtrLP 516
Cdd:pfam02705 386 LVILFALFFLLIDLLFFGANLLKIPHGGWFPLLIGAILFTIMLTWRYGRKLlyERELENAVPLDEFLELLDKHP----VV 461
                         490       500       510       520       530       540       550
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1175476886 517 LVADNLVYISkpGRMGKVDRDVL--YSILDNRPKRARAYWLVDIVVSDDPFERSYAVESFGTDyLFRVRLNLGYK 589
Cdd:pfam02705 462 RVPGTAVFLS--GAPDGVPPALLhnLKHNKVLHERVIFLTIKTLDVPYVPPEERYEVEDLGPG-FYRVIARYGFM 533
Kup COG3158
K+ uptake protein Kup [Inorganic ion transport and metabolism];
32-500 1.90e-173

K+ uptake protein Kup [Inorganic ion transport and metabolism];


Pssm-ID: 442392  Cd Length: 630  Bit Score: 510.40  E-value: 1.90e-173
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1175476886  32 TAGKARTARSRKPSIGLALVALGVVYGDIGTSPLYVMKAIVNGNGGIEsLSQQTVIGALSLIIWTVTLITTVKYVLIALN 111
Cdd:COG3158     2 TSAASPASHGKKSLAALALGALGVVYGDIGTSPLYALKEAFSGAHGLP-VTPENVLGVLSLIFWSLILVVSVKYVLFVMR 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1175476886 112 ADNKGEGGIFALYSLVRKHYPQ-------LVGLAIVGGAALLADGILTPAVTITTAVEGLRTVEPIATFFeggqahVAMV 184
Cdd:COG3158    81 ADNRGEGGILALMALAQRALGDgprrravLVLLGLFGAALFYGDGVITPAISVLSAVEGLEVATPALEPY------VVPI 154
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1175476886 185 AIGIIAVLFGVQKAGTSAIGSVFGIVMSCWFAFLGIAGAIQLAGCPSVLAAVNPVHAIAFLFSsDNHAGFMVLGSVFLAT 264
Cdd:COG3158   155 TLVILVGLFAVQRRGTARVGKLFGPIMLVWFLVLAALGLVHIVQHPEVLAALNPLYAVAFFLE-HGWIAFLALGAVVLAV 233
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1175476886 265 TGAEALYSDMGHVGRANIYASW-PLVKACLILCYLGQGAWLVSNigdPQIAAipdmNPFFQML-DPSVRPLsVGLATAAA 342
Cdd:COG3158   234 TGAEALYADMGHFGRRPIRLAWfFLVLPALLLNYFGQGALLLAD---PEAIE----NPFFLLApDWALLPL-VILATLAT 305
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1175476886 343 IIASQALITGSFTLASEATRLDLMPHLHLKYPS-QEKGQVYIPRINLMLAIGCIAVVLFFRSSSAMEAAYGLAITVTMLM 421
Cdd:COG3158   306 VIASQAVISGAFSLTRQAIQLGYLPRLRIRHTSeEEEGQIYIPAVNWLLLVAVLLLVLGFRSSSNLAAAYGIAVTGTMLI 385
                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1175476886 422 TTALMGVYLWKHRG-RRLLSAAFVATFASLETGFFLSSLSKFPHGGYVTVLIASLLAYVMVVWQRGTSI--ERSQADLLP 498
Cdd:COG3158   386 TTLLAFVVARRLWKwPLWLALLVLGFFLVVDLAFFAANLLKIPDGGWFPLLIGAVLFTLMTTWKRGRRLlaERLREDALP 465

                  ..
gi 1175476886 499 LA 500
Cdd:COG3158   466 LD 467
trkD PRK10745
low affinity potassium transporter Kup;
47-484 3.24e-102

low affinity potassium transporter Kup;


Pssm-ID: 182693  Cd Length: 622  Bit Score: 325.89  E-value: 3.24e-102
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1175476886  47 GLALVALGVVYGDIGTSPLYVMKAIVNGNGGIeSLSQQTVIGALSLIIWTVTLITTVKYVLIALNADNKGEGGIFALYSL 126
Cdd:PRK10745   11 AITLAAIGVVYGDIGTSPLYTLRECLSGQFGF-GVERDAVFGFLSLIFWLLILVVSIKYLTFVMRADNAGEGGILTLMSL 89
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1175476886 127 VRKHYPQ-----LVGLAIVGGAALLADGILTPAVTITTAVEGLRTVEPIATFFeggqahVAMVAIGIIAVLFGVQKAGTS 201
Cdd:PRK10745   90 AGRNTSArttsmLVIMGLIGGSFFYGEVVITPAISVMSAIEGLEIVAPQLDTY------IVPLSIIVLTLLFMIQKHGTG 163
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1175476886 202 AIGSVFGIVMSCWFAFLGIAGAIQLAGCPSVLAAVNPVHAIAFlFSSDNHAGFMVLGSVFLATTGAEALYSDMGHVGRAN 281
Cdd:PRK10745  164 MVGKLFAPIMLTWFLTLAVLGLRSIIANPEVLHALNPMWAVHF-FLEYKTVSFFALGAVVLAITGVEALYADMGHFGKFP 242
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1175476886 282 IYASW-PLVKACLILCYLGQGAWLVSNigdPqiAAIPdmNPFFqMLDP--SVRPLSVgLATAAAIIASQALITGSFTLAS 358
Cdd:PRK10745  243 IRLAWfTVVLPSLVLNYFGQGALLLKN---P--EAIK--NPFF-LLAPdwALIPLLI-LATLATVIASQAVISGVFSLTR 313
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1175476886 359 EATRLDLMPHLHLKYPS-QEKGQVYIPRINLMLAIGCIAVVLFFRSSSAMEAAYGLAITVTMLMTTALMGVYLWKH-RGR 436
Cdd:PRK10745  314 QAVRLGYLPPMRIIHTSeMESGQIYIPFVNWLLYVAVVIVIVSFEHSSNLAAAYGIAVTGTMVLTSILSTTVARKNwHWN 393
                         410       420       430       440
                  ....*....|....*....|....*....|....*....|....*...
gi 1175476886 437 RLLSAAFVATFASLETGFFLSSLSKFPHGGYVTVLIASLLAYVMVVWQ 484
Cdd:PRK10745  394 KYFVALILIAFLCIDIPLFSANLDKLLSGGWLPLSLGLVMFIVMTTWK 441
kup TIGR00794
potassium uptake protein; Proteins of the KUP family include the KUP (TrkD) protein of E. coli, ...
48-488 6.08e-100

potassium uptake protein; Proteins of the KUP family include the KUP (TrkD) protein of E. coli, a partially sequenced ORF from Lactococcus lactis, high affinity K+ uptake systems (Hak1) of the yeast Debaryomyces occidentalis as well as the fungus, Neurospora crassa, and several homologues in plants. While the E. coli KUP protein is assumed to be a secondary transporter, and uptake is blocked by protonophores such as CCCP (but not arsenate), the energy coupling mechanism has not been defined. However, the N. crassa protein has been shown to be a K+:H+ symporter, establishing that the KUP family consists of secondary carriers. The plant high affinity (20mM) K+ transporter can complement K+ uptake defects in E. coli. [Transport and binding proteins, Cations and iron carrying compounds]


Pssm-ID: 129876  Cd Length: 688  Bit Score: 322.11  E-value: 6.08e-100
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1175476886  48 LALVALGVVYGDIGTSPLYVMKAIVNGNGGIEslsqQTVIGALSLIIWTVTLITTVKYVLIALNADNKGEGGIFALYSLV 127
Cdd:TIGR00794   1 LAFQSLGVIYGDIGTSPLYVLSSTFSGGFPTE----RDIFGVLSLIFWLLTFIVSFKYIFIVLRADNNGEGGTFALYSLI 76
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1175476886 128 -------------------------------------------RKHYPQLVGLAIVGGAALLADGILTPAVTITTAVEGL 164
Cdd:TIGR00794  77 gryakisarpvhqeldraessystkspnllnkttslktklelsKFISKFLVIFGLLGGSMVMGDGVLTPAISVLSAVSGL 156
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1175476886 165 RTVEPIATffeggQAHVAMVAIGIIAVLFGVQKAGTSAIGSVFGIVMSCWFAFLGIAGAIQL-AGCPSVLAAVNPVHAIA 243
Cdd:TIGR00794 157 EIVAPSLS-----DTWVVPISCIILVLLFLIQRFGTAKVGFTFAPIILVWLLLLAGIGIYNIvKFNPEVLKALSPYYAVQ 231
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1175476886 244 FLFSSDNhAGFMVLGSVFLATTGAEALYSDMGHVGRANIYASWPL-VKACLILCYLGQGAWLVSNIGDPQiaaipdmNPF 322
Cdd:TIGR00794 232 FFIEYGT-VGWVSLGGVVLSITGVEAMFADLGHFGKLPIQLAWFTfVYPSLILCYIGQAAYLSKHPEAIK-------NPF 303
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1175476886 323 FQML-DPSVRPLSVgLATAAAIIASQALITGSFTLASEATRLDLMPHLHLKYPSQ-EKGQVYIPRINLMLAIGCIAVVLF 400
Cdd:TIGR00794 304 FLSIpDWALWPLFI-IATLAAIIASQAVISGVFSITSQAVRLGCFPRVKIIHTSEkYHGQIYIPFVNWLLMLGVIAVTAG 382
                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1175476886 401 FRSSSAMEAAYGLAITVTMLMTTALMGV---YLWKHrgRRLLSAAFVATFASLETGFFLSSLSKFPHGGYVTVLIASLLA 477
Cdd:TIGR00794 383 FRDTNNLGAAYGIAVTGTFLVTTCLMTVvmtIVWKW--NIYFVALFLLVFLSVELIYFSSNLDKVPEGGWFPLSLSGIFM 460
                         490
                  ....*....|.
gi 1175476886 478 YVMVVWQRGTS 488
Cdd:TIGR00794 461 SVMTTWRYGRF 471
 
Name Accession Description Interval E-value
K_trans pfam02705
K+ potassium transporter; This is a family of K+ potassium transporters that are conserved ...
49-589 0e+00

K+ potassium transporter; This is a family of K+ potassium transporters that are conserved across phyla, having both bacterial (KUP), yeast (HAK), and plant (AtKT) sequences as members.


Pssm-ID: 426935  Cd Length: 534  Bit Score: 543.66  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1175476886  49 ALVALGVVYGDIGTSPLYVMKAIVNGNGGIEsLSQQTVIGALSLIIWTVTLITTVKYVLIALNADNKGEGGIFALYSLVR 128
Cdd:pfam02705   1 ALGALGVVYGDIGTSPLYVLKEIFSGHHGLP-PTEENVLGILSLIFWTLTLIVTVKYVIIVLRADNNGEGGIFALYALIR 79
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1175476886 129 KHYPQ-------LVGLAIVGGAALLADGILTPAVTITTAVEGLRTVEPiatffeGGQAHVAMVAIGIIAVLFGVQKAGTS 201
Cdd:pfam02705  80 PLSKSgrkarwlLVILGLIGAALLYGDGVITPAISVLSAVEGLEVASP------SLEPYVVPISVVILVGLFLIQRFGTE 153
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1175476886 202 AIGSVFGIVMSCWFAFLGIAGAIQLAGCPSVLAAVNPVHAIAFLFSSDNHaGFMVLGSVFLATTGAEALYSDMGHVGRAN 281
Cdd:pfam02705 154 KIGKLFGPIMLIWFLTLAVLGLYNIVQHPEVLKALNPYYAIDFLLRNGLA-GFFVLGAVFLAVTGAEALYADMGHFGKRP 232
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1175476886 282 IYASWP-LVKACLILCYLGQGAWLvsnIGDPQIAAipdmNPFFQMLDPSVRPLSVGLATAAAIIASQALITGSFTLASEA 360
Cdd:pfam02705 233 IRLAWFfVVFPALLLNYFGQGALL---LKNPEAVS----NPFFELVPEWLLWPMVVLATLATIIASQALISGAFSLTRQA 305
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1175476886 361 TRLDLMPHLHLKYPS-QEKGQVYIPRINLMLAIGCIAVVLFFRSSSAMEAAYGLAITVTMLMTTALMGVYL-WKHRGRRL 438
Cdd:pfam02705 306 IQLGYLPRLKIVHTSeKEEGQIYIPLVNWLLMIAVIAVVLGFKSSSNLAAAYGLAVTGTMLITTILLALVArLIWKWPLI 385
                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1175476886 439 LSAAFVATFASLETGFFLSSLSKFPHGGYVTVLIASLLAYVMVVWQRGTSI--ERSQADLLPLARYKAQIGRLSqdtrLP 516
Cdd:pfam02705 386 LVILFALFFLLIDLLFFGANLLKIPHGGWFPLLIGAILFTIMLTWRYGRKLlyERELENAVPLDEFLELLDKHP----VV 461
                         490       500       510       520       530       540       550
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1175476886 517 LVADNLVYISkpGRMGKVDRDVL--YSILDNRPKRARAYWLVDIVVSDDPFERSYAVESFGTDyLFRVRLNLGYK 589
Cdd:pfam02705 462 RVPGTAVFLS--GAPDGVPPALLhnLKHNKVLHERVIFLTIKTLDVPYVPPEERYEVEDLGPG-FYRVIARYGFM 533
Kup COG3158
K+ uptake protein Kup [Inorganic ion transport and metabolism];
32-500 1.90e-173

K+ uptake protein Kup [Inorganic ion transport and metabolism];


Pssm-ID: 442392  Cd Length: 630  Bit Score: 510.40  E-value: 1.90e-173
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1175476886  32 TAGKARTARSRKPSIGLALVALGVVYGDIGTSPLYVMKAIVNGNGGIEsLSQQTVIGALSLIIWTVTLITTVKYVLIALN 111
Cdd:COG3158     2 TSAASPASHGKKSLAALALGALGVVYGDIGTSPLYALKEAFSGAHGLP-VTPENVLGVLSLIFWSLILVVSVKYVLFVMR 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1175476886 112 ADNKGEGGIFALYSLVRKHYPQ-------LVGLAIVGGAALLADGILTPAVTITTAVEGLRTVEPIATFFeggqahVAMV 184
Cdd:COG3158    81 ADNRGEGGILALMALAQRALGDgprrravLVLLGLFGAALFYGDGVITPAISVLSAVEGLEVATPALEPY------VVPI 154
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1175476886 185 AIGIIAVLFGVQKAGTSAIGSVFGIVMSCWFAFLGIAGAIQLAGCPSVLAAVNPVHAIAFLFSsDNHAGFMVLGSVFLAT 264
Cdd:COG3158   155 TLVILVGLFAVQRRGTARVGKLFGPIMLVWFLVLAALGLVHIVQHPEVLAALNPLYAVAFFLE-HGWIAFLALGAVVLAV 233
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1175476886 265 TGAEALYSDMGHVGRANIYASW-PLVKACLILCYLGQGAWLVSNigdPQIAAipdmNPFFQML-DPSVRPLsVGLATAAA 342
Cdd:COG3158   234 TGAEALYADMGHFGRRPIRLAWfFLVLPALLLNYFGQGALLLAD---PEAIE----NPFFLLApDWALLPL-VILATLAT 305
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1175476886 343 IIASQALITGSFTLASEATRLDLMPHLHLKYPS-QEKGQVYIPRINLMLAIGCIAVVLFFRSSSAMEAAYGLAITVTMLM 421
Cdd:COG3158   306 VIASQAVISGAFSLTRQAIQLGYLPRLRIRHTSeEEEGQIYIPAVNWLLLVAVLLLVLGFRSSSNLAAAYGIAVTGTMLI 385
                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1175476886 422 TTALMGVYLWKHRG-RRLLSAAFVATFASLETGFFLSSLSKFPHGGYVTVLIASLLAYVMVVWQRGTSI--ERSQADLLP 498
Cdd:COG3158   386 TTLLAFVVARRLWKwPLWLALLVLGFFLVVDLAFFAANLLKIPDGGWFPLLIGAVLFTLMTTWKRGRRLlaERLREDALP 465

                  ..
gi 1175476886 499 LA 500
Cdd:COG3158   466 LD 467
trkD PRK10745
low affinity potassium transporter Kup;
47-484 3.24e-102

low affinity potassium transporter Kup;


Pssm-ID: 182693  Cd Length: 622  Bit Score: 325.89  E-value: 3.24e-102
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1175476886  47 GLALVALGVVYGDIGTSPLYVMKAIVNGNGGIeSLSQQTVIGALSLIIWTVTLITTVKYVLIALNADNKGEGGIFALYSL 126
Cdd:PRK10745   11 AITLAAIGVVYGDIGTSPLYTLRECLSGQFGF-GVERDAVFGFLSLIFWLLILVVSIKYLTFVMRADNAGEGGILTLMSL 89
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1175476886 127 VRKHYPQ-----LVGLAIVGGAALLADGILTPAVTITTAVEGLRTVEPIATFFeggqahVAMVAIGIIAVLFGVQKAGTS 201
Cdd:PRK10745   90 AGRNTSArttsmLVIMGLIGGSFFYGEVVITPAISVMSAIEGLEIVAPQLDTY------IVPLSIIVLTLLFMIQKHGTG 163
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1175476886 202 AIGSVFGIVMSCWFAFLGIAGAIQLAGCPSVLAAVNPVHAIAFlFSSDNHAGFMVLGSVFLATTGAEALYSDMGHVGRAN 281
Cdd:PRK10745  164 MVGKLFAPIMLTWFLTLAVLGLRSIIANPEVLHALNPMWAVHF-FLEYKTVSFFALGAVVLAITGVEALYADMGHFGKFP 242
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1175476886 282 IYASW-PLVKACLILCYLGQGAWLVSNigdPqiAAIPdmNPFFqMLDP--SVRPLSVgLATAAAIIASQALITGSFTLAS 358
Cdd:PRK10745  243 IRLAWfTVVLPSLVLNYFGQGALLLKN---P--EAIK--NPFF-LLAPdwALIPLLI-LATLATVIASQAVISGVFSLTR 313
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1175476886 359 EATRLDLMPHLHLKYPS-QEKGQVYIPRINLMLAIGCIAVVLFFRSSSAMEAAYGLAITVTMLMTTALMGVYLWKH-RGR 436
Cdd:PRK10745  314 QAVRLGYLPPMRIIHTSeMESGQIYIPFVNWLLYVAVVIVIVSFEHSSNLAAAYGIAVTGTMVLTSILSTTVARKNwHWN 393
                         410       420       430       440
                  ....*....|....*....|....*....|....*....|....*...
gi 1175476886 437 RLLSAAFVATFASLETGFFLSSLSKFPHGGYVTVLIASLLAYVMVVWQ 484
Cdd:PRK10745  394 KYFVALILIAFLCIDIPLFSANLDKLLSGGWLPLSLGLVMFIVMTTWK 441
kup TIGR00794
potassium uptake protein; Proteins of the KUP family include the KUP (TrkD) protein of E. coli, ...
48-488 6.08e-100

potassium uptake protein; Proteins of the KUP family include the KUP (TrkD) protein of E. coli, a partially sequenced ORF from Lactococcus lactis, high affinity K+ uptake systems (Hak1) of the yeast Debaryomyces occidentalis as well as the fungus, Neurospora crassa, and several homologues in plants. While the E. coli KUP protein is assumed to be a secondary transporter, and uptake is blocked by protonophores such as CCCP (but not arsenate), the energy coupling mechanism has not been defined. However, the N. crassa protein has been shown to be a K+:H+ symporter, establishing that the KUP family consists of secondary carriers. The plant high affinity (20mM) K+ transporter can complement K+ uptake defects in E. coli. [Transport and binding proteins, Cations and iron carrying compounds]


Pssm-ID: 129876  Cd Length: 688  Bit Score: 322.11  E-value: 6.08e-100
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1175476886  48 LALVALGVVYGDIGTSPLYVMKAIVNGNGGIEslsqQTVIGALSLIIWTVTLITTVKYVLIALNADNKGEGGIFALYSLV 127
Cdd:TIGR00794   1 LAFQSLGVIYGDIGTSPLYVLSSTFSGGFPTE----RDIFGVLSLIFWLLTFIVSFKYIFIVLRADNNGEGGTFALYSLI 76
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1175476886 128 -------------------------------------------RKHYPQLVGLAIVGGAALLADGILTPAVTITTAVEGL 164
Cdd:TIGR00794  77 gryakisarpvhqeldraessystkspnllnkttslktklelsKFISKFLVIFGLLGGSMVMGDGVLTPAISVLSAVSGL 156
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1175476886 165 RTVEPIATffeggQAHVAMVAIGIIAVLFGVQKAGTSAIGSVFGIVMSCWFAFLGIAGAIQL-AGCPSVLAAVNPVHAIA 243
Cdd:TIGR00794 157 EIVAPSLS-----DTWVVPISCIILVLLFLIQRFGTAKVGFTFAPIILVWLLLLAGIGIYNIvKFNPEVLKALSPYYAVQ 231
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1175476886 244 FLFSSDNhAGFMVLGSVFLATTGAEALYSDMGHVGRANIYASWPL-VKACLILCYLGQGAWLVSNIGDPQiaaipdmNPF 322
Cdd:TIGR00794 232 FFIEYGT-VGWVSLGGVVLSITGVEAMFADLGHFGKLPIQLAWFTfVYPSLILCYIGQAAYLSKHPEAIK-------NPF 303
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1175476886 323 FQML-DPSVRPLSVgLATAAAIIASQALITGSFTLASEATRLDLMPHLHLKYPSQ-EKGQVYIPRINLMLAIGCIAVVLF 400
Cdd:TIGR00794 304 FLSIpDWALWPLFI-IATLAAIIASQAVISGVFSITSQAVRLGCFPRVKIIHTSEkYHGQIYIPFVNWLLMLGVIAVTAG 382
                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1175476886 401 FRSSSAMEAAYGLAITVTMLMTTALMGV---YLWKHrgRRLLSAAFVATFASLETGFFLSSLSKFPHGGYVTVLIASLLA 477
Cdd:TIGR00794 383 FRDTNNLGAAYGIAVTGTFLVTTCLMTVvmtIVWKW--NIYFVALFLLVFLSVELIYFSSNLDKVPEGGWFPLSLSGIFM 460
                         490
                  ....*....|.
gi 1175476886 478 YVMVVWQRGTS 488
Cdd:TIGR00794 461 SVMTTWRYGRF 471
PLN00151 PLN00151
potassium transporter; Provisional
44-529 1.63e-86

potassium transporter; Provisional


Pssm-ID: 215079 [Multi-domain]  Cd Length: 852  Bit Score: 290.10  E-value: 1.63e-86
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1175476886  44 PSIGLALVALGVVYGDIGTSPLYVM-----KAIVNGnggieslsQQTVIGALSLIIWTVTLITTVKYVLIALNADNKGEG 118
Cdd:PLN00151  101 RTLALAFQTLGVVFGDVGTSPLYTFsvmfsKVPIKS--------EEDVLGALSLVLYTLILIPLAKYVLVVLWANDDGEG 172
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1175476886 119 GIFALYSLVRKHY------------------------PQL--------------------VGLAIVGGAALLADGILTPA 154
Cdd:PLN00151  173 GTFALYSLICRHAkvsllpnqlpsderissfrlklptPELerslkikerletssllkkllLLLVLAGTSMVIGDGVLTPA 252
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1175476886 155 VTITTAVEGLRtVEpIATFfegGQAHVAMVAIGIIAVLFGVQKAGTSAIGSVFGIVMSCWFAFLGIAGAIQLAGC-PSVL 233
Cdd:PLN00151  253 MSVMSAVSGLK-VG-VPGF---GQDAVVMISVAFLVILFSVQRFGTSKVGFAFGPALALWFCSLGGIGIYNLVKYdSSVF 327
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1175476886 234 AAVNPVHaIAFLFSSDNHAGFMVLGSVFLATTGAEALYSDMGHVG-RANIYASWPLVKACLILCYLGQGAWLVSNIGDPQ 312
Cdd:PLN00151  328 RAFNPVY-IYYFFKRNSTKAWSALGGCVLCATGSEAMFADLGYFSvRSIQLAFTCLVLPCLLLAYMGQAAYLMKNPDSAE 406
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1175476886 313 IAaipdmnpFFQMLDPSV-RPLSVgLATAAAIIASQALITGSFTLASEATRLDLMPHLHLKYPSQE-KGQVYIPRINLML 390
Cdd:PLN00151  407 QI-------FFSSVPSSLfWPVFL-IANLAALIASRAMTTATFSCIKQSMALGCFPRLKIIHTSRKfMGQIYIPVINWFL 478
                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1175476886 391 AIGCIAVVLFFRSSSAMEAAYGLAITVTMLMTTALMG-VYLWKHRGRRLLSAAFVATFASLETGFFLSSLSKFPHGGYVT 469
Cdd:PLN00151  479 LVMCLVVVCSFRSITDIGNAYGIAEVGVMMVSTILVTlVMLLIWQTNIFLVLCFPVVFLSVELVFFSSVLSSVGDGGWIP 558
                         490       500       510       520       530       540
                  ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1175476886 470 VLIASLLAYVMVVWQRGTSIersqadllplaRYKAQI-GRLSQDTRLPLvADNLVYISKPG 529
Cdd:PLN00151  559 LVFASVFLCIMYIWNYGSKL-----------KYQSEVrQKLSMDLMREL-GSNLGTIRAPG 607
PLN00150 PLN00150
potassium ion transporter family protein; Provisional
48-491 1.39e-78

potassium ion transporter family protein; Provisional


Pssm-ID: 215078 [Multi-domain]  Cd Length: 779  Bit Score: 267.13  E-value: 1.39e-78
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1175476886  48 LALVALGVVYGDIGTSPLYVMKAIVnGNGGIESlsQQTVIGALSLIIWTVTLITTVKYVLIALNADNKGEGGIFALYSLV 127
Cdd:PLN00150   49 LAYQSLGVVYGDLGTSPLYVFKSTF-ANVGVKN--NDDIIGALSLIIYTLTIIPLIKYVFIVLRANDNGEGGSFALYSLL 125
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1175476886 128 RKH---------YP-----------------------------QLVGLAIV--GGAALLADGILTPAVTITTAVEGLRT- 166
Cdd:PLN00150  126 CRYcnisllpnqHPtdvelttyvvdnmnrktriqrklensrvwQNVLLLIVllGTCMVIGDGILTPSISVLSAVVGIKAa 205
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1175476886 167 VEPIATFFeggqahVAMVAIGIIAVLFGVQKAGTSAIGSVFGIVMSCWFAFLGIAGAIQLAGC-PSVLAAVNPVHAIAFl 245
Cdd:PLN00150  206 SSGLDTNL------VTIISCVILVILFSLQRFGTHKVSFLFAPIFLCWFFSLALIGCYNIIKWdKSVFLAFNPLYIVSF- 278
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1175476886 246 FSSDNHAGFMVLGSVFLATTGAEALYSDMGHVGRANIYASWP-LVKACLILCYLGQGAWLVSNIGDPQiaaipdmNPFFQ 324
Cdd:PLN00150  279 FIRNGRQGWESLGGIVLCMTGTEAMFADLGHFTVKSMQIAFTsLVYPCLLLTYLGQAAYLVKHMEDVN-------DPFYR 351
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1175476886 325 MLDPSVRPLSVGLATAAAIIASQALITGSFTLASEATRLDLMPHLHLKYPSQE-KGQVYIPRINLMLAIGCIAVVLFFRS 403
Cdd:PLN00150  352 SLPKPIYWPIFVLATCSAMIASQAMISATFSIVKQAMALGCFPRVKIVHTSNKvHGQVYIPEINWILMVLCLVITAGFRD 431
                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1175476886 404 SSAMEAAYGLAITVTMLMTTALMG---VYLWkhRGRRLLSAAFVATFASLETGFFLSSLSKFPHGGYVTVLIASLLAYVM 480
Cdd:PLN00150  432 TDEIGNAYGIAVVGVMIITTCLMTlvmIIIW--RKHILLALLFFTVFAIIEGIYFSAVLFKVTQGGWVPLVIAAVFGTVM 509
                         490
                  ....*....|.
gi 1175476886 481 VVWQRGTSIER 491
Cdd:PLN00150  510 YTWHYGTRKRY 520
PLN00148 PLN00148
potassium transporter; Provisional
48-487 2.74e-74

potassium transporter; Provisional


Pssm-ID: 215077 [Multi-domain]  Cd Length: 785  Bit Score: 255.52  E-value: 2.74e-74
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1175476886  48 LALVALGVVYGDIGTSPLYVMKAIVNGNGGiESLSQQTVIGALSLIIWTVTLITTVKYVLIALNADNKGEGGIFALYSLV 127
Cdd:PLN00148   27 LAYQSFGVVYGDLSTSPLYVYKSTFSGKLQ-KHQNEETIFGAFSLIFWTFTLIPLLKYVTILLSADDNGEGGTFALYSLL 105
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1175476886 128 RKH-----------------------YPQLVG------------------LAIV--GGAALLADGILTPAVTITTAVEGL 164
Cdd:PLN00148  106 CRHaklsllpnqqaadeelsaykygpSTQTVGssplkrflekhkrlrtalLLVVlfGACMVIGDGVLTPAISVLSSVSGL 185
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1175476886 165 rtvEPIATFFEGGQahVAMVAIGIIAVLFGVQKAGTSAIGSVFGIVMSCWFAFLGIAGAIQLAGC-PSVLAAVNPVHAIA 243
Cdd:PLN00148  186 ---QVTETKLTDGE--LVLLACVILVGLFALQHCGTHRVAFMFAPIVIIWLLSIGSIGLYNIIHWnPKIIHALSPYYIIK 260
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1175476886 244 FlFSSDNHAGFMVLGSVFLATTGAEALYSDMGHVGRANIYASWPLV-KACLILCYLGQGAWLVSNIGDpqiaaIPdmNPF 322
Cdd:PLN00148  261 F-FRVTGKDGWISLGGILLSITGTEAMFADLGHFTAASIRLAFATViYPCLVVQYMGQAAFLSKNIPS-----IP--NSF 332
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1175476886 323 FQML-DPSVRPLSVgLATAAAIIASQALITGSFTLASEATRLDLMPHLHLKYPSQE-KGQVYIPRINLMLAIGCIAVVLF 400
Cdd:PLN00148  333 YDSIpDPVFWPVFV-IATLAAIVGSQAVITATFSIVKQCHALGCFPRVKVVHTSKHiYGQIYIPEINWILMILTLAVTIG 411
                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1175476886 401 FRSSSAMEAAYGLAITVTMLMTTALMG---VYLWKHrgRRLLSAAFVATFASLETGFFLSSLSKFPHGGYVTVLIASLLA 477
Cdd:PLN00148  412 FRDTTLIGNAYGLACMTVMFITTFLMAlviIFVWQK--SIILAALFLLFFGFIEGVYLSAALMKVPQGGWVPLVLSAIFM 489
                         490
                  ....*....|
gi 1175476886 478 YVMVVWQRGT 487
Cdd:PLN00148  490 SIMYIWHYGT 499
PLN00149 PLN00149
potassium transporter; Provisional
41-487 2.95e-65

potassium transporter; Provisional


Pssm-ID: 177753 [Multi-domain]  Cd Length: 779  Bit Score: 230.51  E-value: 2.95e-65
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1175476886  41 SRKPSIGLALVALGVVYGDIGTSPLYVMKAIVnGNGGIESLSQQTVIGALSLIIWTVTLITTVKYVLIALNADNKGEGGI 120
Cdd:PLN00149   16 SWRTVLTLAYQSLGVVYGDLSTSPLYVYKSTF-AEDIQHSETNEEIFGVLSFVFWTLTLIPLLKYVFIVLRADDNGEGGT 94
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1175476886 121 FALYSLVRKH------------------YPQ-----------------------------LVGLAIVGGAALLADGILTP 153
Cdd:PLN00149   95 FALYSLLCRHarvnslpncqladeelseYKKdsgsssmplsgfgsslkstlekhrvlqrfLLVLALIGTCMVIGDGVLTP 174
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1175476886 154 AVTITTAVEGLRtvepIATFFEGGQAHVAMVAIGIIAVLFGVQKAGTSAIGSVFGIVMSCWFAFLGIAGAIQLAGC-PSV 232
Cdd:PLN00149  175 AISVFSAVSGLE----LSMSKEHHKYVEVPVACIILIGLFALQHYGTHRVGFLFAPVVLTWLLCISAIGVYNIFHWnPHV 250
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1175476886 233 LAAVNPVHAIAFLfSSDNHAGFMVLGSVFLATTGAEALYSDMGHVGRANIYASWP-LVKACLILCYLGQGAWLVSN---I 308
Cdd:PLN00149  251 YQALSPYYMYKFL-KKTQRGGWMSLGGILLCITGSEAMFADLGHFSQLSIKIAFTsLVYPSLILAYMGQAAYLSKHhviE 329
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1175476886 309 GDPQIAaipdmnpFFQMLDPSVRPLSVGLATAAAIIASQALITGSFTLASEATRLDLMPHLHLKYPSQE-KGQVYIPRIN 387
Cdd:PLN00149  330 SDYRIG-------FYVSVPEKLRWPVLVIAILAAVVGSQAIITGTFSIIKQCSALGCFPKVKIVHTSSKiHGQIYIPEIN 402
                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1175476886 388 LMLAIGCIAVVLFFRSSSAMEAAYGLAITVTMLMTTALMG---VYLWkhRGRRLLSAAFVATFASLETGFFLSSLSKFPH 464
Cdd:PLN00149  403 WTLMLLCLAVTVGFRDTKRLGNASGLAVITVMLVTTCLMSlviVLCW--HKSVLLAICFIFFFGTIEALYFSASLIKFLE 480
                         490       500
                  ....*....|....*....|...
gi 1175476886 465 GGYVTVLIASLLAYVMVVWQRGT 487
Cdd:PLN00149  481 GAWVPIALSFIFLLVMYVWHYGT 503
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
Help | Disclaimer | Write to the Help Desk
NCBI | NLM | NIH