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Conserved domains on  [gi|1176562327|ref|WP_082389317|]
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MULTISPECIES: SPOR domain-containing protein [Pseudoalteromonas]

Protein Classification

SPOR domain-containing protein( domain architecture ID 11459733)

SPOR domain-containing protein similar to Bacillus subtilis stage II sporulation protein B and Escherichia coli cell division proteins FtsN, DamX, and DedD

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
DedD COG3147
Cell division protein DedD (periplasmic protein involved in septation) [Cell cycle control, ...
 112-189 2.63e-03

Cell division protein DedD (periplasmic protein involved in septation) [Cell cycle control, cell division, chromosome partitioning];


:

Pssm-ID: 442381 [Multi-domain]  Cd Length: 140  Bit Score: 36.68  E-value: 2.63e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1176562327 112 AANKAAEAG----VQLGLYLTPKKVRHQVLNLK-RDYPAVLndldfrfKTREQKGVTLYGLRAGPFANYTQATAFC-EIA 185
Cdd:COG3147    55 AAKAAAPAGggwvVQLGAFSNEDNAKELVAKLRaAGYPAYT-------EPVTTGGGTLYRVRVGPFASRAEAEAALaKLK 127


                  ....
gi 1176562327 186 KRMG 189
Cdd:COG3147   128 KLTG 131
 
Name Accession Description Interval E-value
DedD COG3147
Cell division protein DedD (periplasmic protein involved in septation) [Cell cycle control, ...
 112-189 2.63e-03

Cell division protein DedD (periplasmic protein involved in septation) [Cell cycle control, cell division, chromosome partitioning];


Pssm-ID: 442381 [Multi-domain]  Cd Length: 140  Bit Score: 36.68  E-value: 2.63e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1176562327 112 AANKAAEAG----VQLGLYLTPKKVRHQVLNLK-RDYPAVLndldfrfKTREQKGVTLYGLRAGPFANYTQATAFC-EIA 185
Cdd:COG3147    55 AAKAAAPAGggwvVQLGAFSNEDNAKELVAKLRaAGYPAYT-------EPVTTGGGTLYRVRVGPFASRAEAEAALaKLK 127


                  ....
gi 1176562327 186 KRMG 189
Cdd:COG3147   128 KLTG 131
 
Name Accession Description Interval E-value
DedD COG3147
Cell division protein DedD (periplasmic protein involved in septation) [Cell cycle control, ...
 112-189 2.63e-03

Cell division protein DedD (periplasmic protein involved in septation) [Cell cycle control, cell division, chromosome partitioning];


Pssm-ID: 442381 [Multi-domain]  Cd Length: 140  Bit Score: 36.68  E-value: 2.63e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1176562327 112 AANKAAEAG----VQLGLYLTPKKVRHQVLNLK-RDYPAVLndldfrfKTREQKGVTLYGLRAGPFANYTQATAFC-EIA 185
Cdd:COG3147    55 AAKAAAPAGggwvVQLGAFSNEDNAKELVAKLRaAGYPAYT-------EPVTTGGGTLYRVRVGPFASRAEAEAALaKLK 127


                  ....
gi 1176562327 186 KRMG 189
Cdd:COG3147   128 KLTG 131
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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