|
Name |
Accession |
Description |
Interval |
E-value |
| FepA |
COG4771 |
Outer membrane receptor for ferrienterochelin and colicins [Inorganic ion transport and ... |
18-757 |
2.41e-77 |
|
Outer membrane receptor for ferrienterochelin and colicins [Inorganic ion transport and metabolism];
Pssm-ID: 443803 [Multi-domain] Cd Length: 612 Bit Score: 262.10 E-value: 2.41e-77
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1189288138 18 LLSVACISASAHAAQATDEQNSQgASTLSTVIVTGTRaQERTASASLSPIDVISGDSLRSSGSSELGTVLaRLIPSINFP 97
Cdd:COG4771 1 LLLASLLLLLALAAQAADALAED-ATELEEVVVTATR-TEQSLSDAPASVSVITAEEIEKLGATDLADAL-RLLPGVSVT 77
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1189288138 98 RPSLVDGaelTRPAQLRGLSPDQVLVLVlvlvlvNGKRRHTSAFvnlggavgrgSAPADLNAIPLSAIDHIEVLRDGASA 177
Cdd:COG4771 78 RSGGRGG---SSGISIRGLGGDRVLVLI------DGVPVNNPAL----------GGGGDLSYIPPDDIERIEVIRGPASA 138
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1189288138 178 RYGSDAIAGVINIILKSADH--GGSISSKYGQYKKGdgiQRQVSGNTGFAlGDNGTLNLSGEGSNNDYTNRAGDDFRTSS 255
Cdd:COG4771 139 LYGSDAIGGVINIITKKPTDelEGSVSLGYGSNGNG---TYSGSLSLGGP-GDKLSFLLSGSYRDRDGYLDYRNGGFVGN 214
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1189288138 256 IGSTTYgqqvfrqgepqthegKLQYNAEYSFNDAAEFYSFGGYSKRRGEtaafyrpSNASNNIAAIYPNGYLPLINGTLE 335
Cdd:COG4771 215 SGYERY---------------NLNAKLGYRLSDNHRLSLSGGYSRQDRD-------GGPPTLGDTEISSDNAGDRDTTTD 272
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1189288138 336 DTSLVAGLRGELADDWhyDVSANYGKNtyelrtkTINTSLGLNTPRSFDNGTLTNDQKQLGFDLSREFSAAWlphpvSVS 415
Cdd:COG4771 273 RGNYSLRYNGDLGDNL--DLSLYYSRT-------DRDSTNGSLGGSTGSFSDSDDTTYGLELDLTYPLGGNH-----TLT 338
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1189288138 416 FGAEYLHQGYQIEagqaesyfqtgssglggfRAADAGSYSRHNFAQYLDVETNLTEKLGVSAAVRHEDYSDFG----SNV 491
Cdd:COG4771 339 LGAEYRYDDLDSS------------------SFLGGADASRDTYGLFAQDEWKLTDKLTLTAGLRYDYYSTFGasnyTAF 400
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1189288138 492 SGSLSARYDFTPQVALRGSVSTGFRAPSLAQQNFTFTssqligntiqeagtfpaGSNVAQLLGAEDLKPEKSRNYSLSLV 571
Cdd:COG4771 401 SPRLGLRYDLSDNLTLRASYGRGFRAPSLAELYGSGT-----------------GTPGRYVLGNPDLKPETSDNYELGLE 463
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1189288138 572 LQPLD-SLTVTADVYRIDIQDRISLSSNlvlnntainylrsngvgDINYTSARYFTNATDTSTDGVDLVANYRYqfdnGV 650
Cdd:COG4771 464 YRLGNgGLSLSLTGFYTDIKDLIVLVPV-----------------GPGPGDVLQYENVGKARTYGLELELKYRL----GK 522
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1189288138 651 RWNSTVGYNYNHTKVTDVKANPAIldqlgvnlvrvdrrerigllgDTTPQHKLTLGNDLTFGNWALHSNLVRYGEFTSYQ 730
Cdd:COG4771 523 GLTLTASYTYLDSKIDDGDTGEPL---------------------PNVPPHKANLGLDYRLPKWWLLLLLTRYYGGRYVT 581
|
730 740
....*....|....*....|....*...
gi 1189288138 731 A-DKVKDQTFSAAWLLDLAVDYTLKNWV 757
Cdd:COG4771 582 PpSGRLEGYTPGYTLLDLRASYKLTKNL 609
|
|
| ligand_gated_channel |
cd01347 |
TonB dependent/Ligand-Gated channels are created by a monomeric 22 strand (22,24) ... |
66-806 |
2.25e-66 |
|
TonB dependent/Ligand-Gated channels are created by a monomeric 22 strand (22,24) anti-parallel beta-barrel. Ligands apparently bind to the large extracellular loops. The N-terminal 150-200 residues form a plug from the periplasmic end of barrel. Energy (proton-motive force) and TonB-dependent conformational alteration of channel (parts of plug, and loops 7 and 8) allow passage of ligand. FepA residues 12-18 form the TonB box, which mediates the interaction with the TonB-containing inner membrane complex. TonB preferentially interacts with ligand-bound receptors. Transport thru the channel may resemble passage thru an air lock. In this model, ligand binding leads to closure of the extracellular end of pore, then a TonB-mediated signal facillitates opening of the interior side of pore, deforming the N-terminal plug and allowing passage of the ligand to the periplasm. Such a mechanism would prevent the free diffusion of small molecules thru the pore.
Pssm-ID: 238657 [Multi-domain] Cd Length: 635 Bit Score: 232.73 E-value: 2.25e-66
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1189288138 66 PIDVISGDSLRSSGSSELGTVLARlIPSINFPRpslvDGAELTRPAQLRGLSPDQVLVLVlvlvlvNGKRRHTSafvnlg 145
Cdd:cd01347 1 SVSVITAEDIEKQPATSLADLLRR-IPGVSVTR----GGGGGGSTISIRGFGPDRTLVLV------DGLPLASS------ 63
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1189288138 146 gavgRGSAPADLNAIPLSAIDHIEVLRDGASARYGSDAIAGVINIILKSADH--GGSISSKYGQYKKGDGIQRQVSGNTG 223
Cdd:cd01347 64 ----NYGRGVDLNTIPPELIERVEVLKGPSSALYGSGAIGGVVNIITKRPTDefGGSVTAGYGSDNSGSSGGGGFDVSGA 139
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1189288138 224 FALGDNGTLNLSGegsnndyTNRAGDDFRTSSIGSTTYGQQVfrqgepQTHEGKLQYNaeysFNDAAEFYSFGGYSKRRG 303
Cdd:cd01347 140 LADDGAFGARLYG-------AYRDGDGTIDGDGQADDSDEER------YNVAGKLDWR----PDDDTRLTLDAGYQDQDA 202
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1189288138 304 ETA----AFYRPSNASNNIAAIYPNGYLPLINGTLEDTSLVAGLRGELADDWH-YDVSANYGKNTYELRTKTINTSLGLN 378
Cdd:cd01347 203 DGPggtlPANGTGSSLGGGPSSNTNGDRDWDYRDRYRKRASLGLEHDLNDTGWtLRANLSYSYTDNDGDPLILNGGNNAA 282
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1189288138 379 TPRSFDNGTLTN-DQKQLGFDLSREFSAAWLPHPVSVSFGAEYLHQgyqieagqaesyfqtgssglggfraadagSYSRH 457
Cdd:cd01347 283 GGDLGRSGYSSErDTTQLGFDAGLNAPFGTGPVAHTLTLGVEYRRE-----------------------------ELDEK 333
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1189288138 458 NFAQYLDVETNLTEKLGVSAAVRHEDY--------------SDFGSNVSGSLSARYDFTPQVALRGSVSTGFRAPSLAQQ 523
Cdd:cd01347 334 QTALYAQDTIELTDDLTLTLGLRYDHYdqdskdtiaggttaKKSYSHWSPSLGLVYKLTDGLSLYASYSQGFRAPSLGEL 413
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1189288138 524 NFTFTSSqligntiqeagtfpagsnVAQLLGAEDLKPEKSRNYSLSLVLQPLDSLTVTADVYRIDIQDRISLSSNLVLNN 603
Cdd:cd01347 414 YGGGSHG------------------GTAAVGNPNLKPEKSKQYELGLKYDPGDGLTLSAALFRIDIKNEIVSTPTNTGLG 475
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1189288138 604 TAINYlrsngvgdinytsaryfTNATDTSTDGVDLVANYRyqFDNGVRWnsTVGYNYNHTKVTDVKANPAildqlgvnlv 683
Cdd:cd01347 476 LVTVY-----------------VNGGKARIRGVELEASYD--LTDGLGL--TGSYTYTDTEVKRTDGATT---------- 524
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1189288138 684 rvdrreriGLLGDTTPQHKLTLGND--LTFGNWALHSNLVRYGEFTSYQADKVKDQTFSAAWLLDLAVDYTL-KNWVFTL 760
Cdd:cd01347 525 --------GNRLPGIPKHTANLGLDyeLPDEGLTAGGGVRYRGKQYADTANGNNTVKVPGYTLVDLSASYQFtKNLTLRL 596
|
730 740 750 760
....*....|....*....|....*....|....*....|....*.
gi 1189288138 761 GGDNITDKypeklnDFSSSGGNLAYSTFSPYGYsGAFYYGKVTYNW 806
Cdd:cd01347 597 GVNNLFDK------DYYTSLSVRGSGLYGYYGP-GRTYYLSVSYKF 635
|
|
| TonB_dep_Rec |
pfam00593 |
TonB dependent receptor; This model now only covers the conserved part of the barrel structure. |
279-785 |
1.35e-30 |
|
TonB dependent receptor; This model now only covers the conserved part of the barrel structure.
Pssm-ID: 395474 [Multi-domain] Cd Length: 475 Bit Score: 126.42 E-value: 1.35e-30
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1189288138 279 QYNAEYSFNDAAEFYSFGGYSKRRGETAAFYRPSNASNNIAAIYPNGYLPLINGTLEDTSLVAGLRGELADDWHYDVSAN 358
Cdd:pfam00593 3 QLSLDLLGDDTLLTLGYDYSRYTDGLDLGLTLDGYGNDGGYLGDRPLYYGRDYSDTDRKRLSLGYDYDLGDGLSWLSTLR 82
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1189288138 359 YGKNTYELRTKTINTSLGLNTPRSFDNGTLTNDQKQLGFDLSREFSAAWlphpvSVSFGAEYLHQGYQIeagQAESYFQT 438
Cdd:pfam00593 83 LGLRYSSLDGDYTSNSSGLSGAGDYLSDDRLYGLYGLDGDLELSLDLSH-----DLLLGVELRTAGLDY---RRLDDDAY 154
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1189288138 439 GSSGLGGFRAADAGSYSRHNFAQYLDVETNLTEKLGVSAAVRHEDYSDFGSN--------------VSGSLSARYDFTPQ 504
Cdd:pfam00593 155 DPYDPANPSSSSYSDTTTDSYGLYLQDNIKLTDRLTLTLGLRYDHYSTDGDDgngggdnfsrsysaFSPRLGLVYKPTDN 234
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1189288138 505 VALRGSVSTGFRAPSLAQQNFTFTSsqligntiqeagtfpaGSNVAQLLGAEDLKPEKSRNYSLSLVLQPlDSLTVTADV 584
Cdd:pfam00593 235 LSLYASYSRGFRAPSLGELYGSGSG----------------GGGGAVAGGNPDLKPETSDNYELGLKYDD-GRLSLSLAL 297
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1189288138 585 YRIDIQDRISLSSNLVLNNTAINylrsngvgdinytsarYFTNATDTSTDGVDLVANYRyqfdngvRWNSTVGYN-YNHT 663
Cdd:pfam00593 298 FYIDIKNLITSDPDGPGLGGTVY----------------TYTNVGKARIRGVELELSGR-------LWGLGLSGGgYTYT 354
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1189288138 664 KVTDVKANPAILDQLgvnlvrvdrrerigllgDTTPQHKLTLGNDLTF--GNWALHSNLVRYGEFTSYQADKVKDQTFSA 741
Cdd:pfam00593 355 DADDDADADDTGNPL-----------------PNVPRHTANLGLTYDFplGGWGARLGARYVGSGERRYGDAANTFKTPG 417
|
490 500 510 520
....*....|....*....|....*....|....*....|....*
gi 1189288138 742 AWLLDLAVDYTL-KNWVFTLGGDNITDKYPEKLNDFSSSGGNLAY 785
Cdd:pfam00593 418 YTLVDLSAGYRLnKNLTLRLGVNNLFDKYYKRYYSSGGGNLGGYP 462
|
|
| TonB-hemlactrns |
TIGR01786 |
TonB-dependent hemoglobin/transferrin/lactoferrin receptor family protein; This model ... |
149-785 |
2.14e-24 |
|
TonB-dependent hemoglobin/transferrin/lactoferrin receptor family protein; This model represents a family of TonB-dependent outer membrane receptor/transporters acting on iron-containing proteins such as hemoglobin, transferrin and lactoferrin. Two subfamily models with a narrower scope are contained within this model, the heme/hemoglobin receptor family protein model (TIGR01785) and the transferrin/lactoferrin receptor family model (TIGR01776). Accessions which score above trusted to this model while not scoring above trusted to the more specific models are most likely to be hemoglobin transporters. Nearly all of the species containing trusted hits to this model have access to hemoglobin, transferrin or lactoferrin or related proteins in their biological niche. [Transport and binding proteins, Cations and iron carrying compounds, Transport and binding proteins, Porins]
Pssm-ID: 273808 [Multi-domain] Cd Length: 715 Bit Score: 109.04 E-value: 2.14e-24
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1189288138 149 GRGSAPADLNAIPLSAIDHIEVLRDGASARYGSDAIAGVINIILKSAD---HGGSisSKYGQYKKG-DGIQRQVSGNTGF 224
Cdd:TIGR01786 89 GQGSTFYAINSIDPELIKSIEIVKGASSSLYGSGALGGVVAFRTKDAAdllKPGK--DLGGLSKLGySSANNRFTQSVAA 166
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1189288138 225 AL-GDN------GTLNLSGEGSNNDYTNrAGDDFRTSSIGSTTYGQQVFRqgepqtheGKLQYnaeySFNDAAEFYSFGG 297
Cdd:TIGR01786 167 AGrNDDvdalvqATYRRGHELKNGNKAN-IGNESKRSKPNPSDYKSQSFL--------AKLGW----QLNDAHRLGLSLE 233
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1189288138 298 YSKRRGETAAFYRPSNASNNIAAIYPNGYLPLINGT--LEDTSLVAGLRGElaDDWHYDVSANYGKNTYELRTKTINTSL 375
Cdd:TIGR01786 234 YTQTDYDEPEMTNTSYLTKPLGAPLLSSTVVLGDSKtrDRRTGLDYELNPD--NSWLDTVKLALDKQYIQLYNYLNATSA 311
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1189288138 376 GlnTPRSFDNGTLTNDQKQ---LGFDLsrEFSAAWLPHPVSVSFGAEYLHQGYQIEAGQAEsyFQTGSSGLGGFRAaDAG 452
Cdd:TIGR01786 312 S--DYPGVDKNGRYKDKYDyytLGFDT--NNKIEFSVHSLSLTYGLDRFKDKVSTGDSRRN--LPTAAYNLYGYEG-ENR 384
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1189288138 453 SYSRHNFAQYLDVETNLTEKLGVSAAVR--------------HEDYSDFGSNV-SGSLSARYDFTPQVALRGSVSTGFRA 517
Cdd:TIGR01786 385 PVKGSNFGLFLQDNIKLGDWLSLSAGLRydhyktdpkadeskDYGAISKTYSRwSPSLGLTYKPTPWLTLYYSYSQGFRA 464
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1189288138 518 PSLAQQNFTFTssqligntiqeagtfPAGSNVAQLLGAEDLKPEKSRNYSLSLVLQpLDSLTVTADVYRIDIQDRISLSS 597
Cdd:TIGR01786 465 PSFDELYGTGA---------------HPGGGPYTFLPNPNLKPETSKNWEIGINLH-FDQLDFKVSYFRNDYKDFIDLGI 528
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1189288138 598 nlvLNNTAINYlrsNGVGDINYTSaryFTNATDTSTDGVDLVANYRYQFDNGVRWNSTVGYNYNHTKVTDVKANPAildq 677
Cdd:TIGR01786 529 ---GVTAKGNM---AQVGSNTITN---YVNIDNARIRGIELSGRYDLGSFFSGPDGWTTTLKYGYTKGKDSDTNPW---- 595
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1189288138 678 lgvnLVRVDRRERIGLLGDTTPQHKLTLGNDLTFgnWALHSNLVRYGEFTSYQADKVKDQTFSAAW-LLDLAVDYTL-KN 755
Cdd:TIGR01786 596 ----LNAITPLKVVLGLGYDHPDEKWGVGLTLTF--SGAKDAVDAYATYYENGEAAKAGPLRTPSYtVVDLYGYYKPnKN 669
|
650 660 670
....*....|....*....|....*....|.
gi 1189288138 756 WVFTLGGDNITD-KYPEKLNDFSSSGGNLAY 785
Cdd:TIGR01786 670 LTLRFGVYNLLDrKYTTWESARQAGPLATGY 700
|
|
| PRK13513 |
PRK13513 |
ligand-gated channel protein; |
15-594 |
1.10e-23 |
|
ligand-gated channel protein;
Pssm-ID: 184104 [Multi-domain] Cd Length: 659 Bit Score: 106.78 E-value: 1.10e-23
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1189288138 15 SANLLSVACISASAHAAQATDEqnsqgASTLSTVIVTGTRAQERTASASLSpIDVISGDSLRSSGSSELGTVLaRLIPSI 94
Cdd:PRK13513 10 KAALVIAAAISSQAYAAEKTNT-----ATPTDTMVVTASGFQQRIQDAPAS-ISVVTREQLENKAYRDVTDAL-KDVPGV 82
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1189288138 95 nfprpsLVDGAELTRPAQLRGLSPdqvlvlVLVLVLVNGKRRHTsafvnlggavgRGSAP-ADLNAI------PLSAIDH 167
Cdd:PRK13513 83 ------VVTGGGSTSDISIRGMAA------KYTLILVDGKRVDT-----------RSTRPnSDGSGIeqgwlpPLAAIER 139
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1189288138 168 IEVLRDGASARYGSDAIAGVINIILKSADHG--GSISSKYG-QYKKGDGIQRQVSGNTGFALGDNgtlnLSGEGSNNDYT 244
Cdd:PRK13513 140 IEVVRGPMSSLYGSDAMGGVINIITRKVQKEwhGSLRADATlQEDSKSGDIFQTNAYASGPLIDG----LLGLKVSGLLS 215
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1189288138 245 NRAGDDFrtssIGSttYGQQVFRQGepqthegklqyNAEYSF--NDAAEF-YSFGGYSKRRGETAAFYRPSNASNNIAAI 321
Cdd:PRK13513 216 HRSEDKI----IDG--YNEQRMRNG-----------TATFSLtpDDNNEFdFEIGRYVQDRNSTPGRTLALNGTNSDTQY 278
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1189288138 322 YPNGYLPLINGTLEDTSLvaglrgeladdwhydvsanygkNTYELRTKTINTSLGLNTprsfdNGTLTNDQKQLGFDlsr 401
Cdd:PRK13513 279 DRNNYAITHNGYYDFGNS----------------------TSYIQRDETRNPSRQMKS-----VDTIFNTQTSFLLD--- 328
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1189288138 402 efsaawlPHpvSVSFGAEYLHQGYQIEAGQAESyfqtgssglggfrAADAGSYSRHNFAQYLDVETNLTEKLGVSAAVRH 481
Cdd:PRK13513 329 -------DH--TLSLGGQYRYEELYDKGNQLPS-------------ASDLNKLTRWSWALFAEDEWQMTNDFALTGGIRM 386
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1189288138 482 EDYSDFGSNVSGSLSARYDFTPQVALRGSVSTGFRAPSLAQQnfTFTSSQLIGntiqeagtfpAGSNVAQLLGAEDLKPE 561
Cdd:PRK13513 387 DQDQNYGTHWTPRLYGVWHLADQWTLKGGVSTGYRSPDLRQA--TDNWGQLTG----------GGGLPALILGNSDLKPE 454
|
570 580 590
....*....|....*....|....*....|...
gi 1189288138 562 KSRNYSLSLVLQPLDSLTVTADVYRIDIQDRIS 594
Cdd:PRK13513 455 KSISQEIGILWDNQENLNASVTLFNTDFKDKIT 487
|
|
| |
|
Name |
Accession |
Description |
Interval |
E-value |
| FepA |
COG4771 |
Outer membrane receptor for ferrienterochelin and colicins [Inorganic ion transport and ... |
18-757 |
2.41e-77 |
|
Outer membrane receptor for ferrienterochelin and colicins [Inorganic ion transport and metabolism];
Pssm-ID: 443803 [Multi-domain] Cd Length: 612 Bit Score: 262.10 E-value: 2.41e-77
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1189288138 18 LLSVACISASAHAAQATDEQNSQgASTLSTVIVTGTRaQERTASASLSPIDVISGDSLRSSGSSELGTVLaRLIPSINFP 97
Cdd:COG4771 1 LLLASLLLLLALAAQAADALAED-ATELEEVVVTATR-TEQSLSDAPASVSVITAEEIEKLGATDLADAL-RLLPGVSVT 77
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1189288138 98 RPSLVDGaelTRPAQLRGLSPDQVLVLVlvlvlvNGKRRHTSAFvnlggavgrgSAPADLNAIPLSAIDHIEVLRDGASA 177
Cdd:COG4771 78 RSGGRGG---SSGISIRGLGGDRVLVLI------DGVPVNNPAL----------GGGGDLSYIPPDDIERIEVIRGPASA 138
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1189288138 178 RYGSDAIAGVINIILKSADH--GGSISSKYGQYKKGdgiQRQVSGNTGFAlGDNGTLNLSGEGSNNDYTNRAGDDFRTSS 255
Cdd:COG4771 139 LYGSDAIGGVINIITKKPTDelEGSVSLGYGSNGNG---TYSGSLSLGGP-GDKLSFLLSGSYRDRDGYLDYRNGGFVGN 214
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1189288138 256 IGSTTYgqqvfrqgepqthegKLQYNAEYSFNDAAEFYSFGGYSKRRGEtaafyrpSNASNNIAAIYPNGYLPLINGTLE 335
Cdd:COG4771 215 SGYERY---------------NLNAKLGYRLSDNHRLSLSGGYSRQDRD-------GGPPTLGDTEISSDNAGDRDTTTD 272
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1189288138 336 DTSLVAGLRGELADDWhyDVSANYGKNtyelrtkTINTSLGLNTPRSFDNGTLTNDQKQLGFDLSREFSAAWlphpvSVS 415
Cdd:COG4771 273 RGNYSLRYNGDLGDNL--DLSLYYSRT-------DRDSTNGSLGGSTGSFSDSDDTTYGLELDLTYPLGGNH-----TLT 338
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1189288138 416 FGAEYLHQGYQIEagqaesyfqtgssglggfRAADAGSYSRHNFAQYLDVETNLTEKLGVSAAVRHEDYSDFG----SNV 491
Cdd:COG4771 339 LGAEYRYDDLDSS------------------SFLGGADASRDTYGLFAQDEWKLTDKLTLTAGLRYDYYSTFGasnyTAF 400
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1189288138 492 SGSLSARYDFTPQVALRGSVSTGFRAPSLAQQNFTFTssqligntiqeagtfpaGSNVAQLLGAEDLKPEKSRNYSLSLV 571
Cdd:COG4771 401 SPRLGLRYDLSDNLTLRASYGRGFRAPSLAELYGSGT-----------------GTPGRYVLGNPDLKPETSDNYELGLE 463
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1189288138 572 LQPLD-SLTVTADVYRIDIQDRISLSSNlvlnntainylrsngvgDINYTSARYFTNATDTSTDGVDLVANYRYqfdnGV 650
Cdd:COG4771 464 YRLGNgGLSLSLTGFYTDIKDLIVLVPV-----------------GPGPGDVLQYENVGKARTYGLELELKYRL----GK 522
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1189288138 651 RWNSTVGYNYNHTKVTDVKANPAIldqlgvnlvrvdrrerigllgDTTPQHKLTLGNDLTFGNWALHSNLVRYGEFTSYQ 730
Cdd:COG4771 523 GLTLTASYTYLDSKIDDGDTGEPL---------------------PNVPPHKANLGLDYRLPKWWLLLLLTRYYGGRYVT 581
|
730 740
....*....|....*....|....*...
gi 1189288138 731 A-DKVKDQTFSAAWLLDLAVDYTLKNWV 757
Cdd:COG4771 582 PpSGRLEGYTPGYTLLDLRASYKLTKNL 609
|
|
| ligand_gated_channel |
cd01347 |
TonB dependent/Ligand-Gated channels are created by a monomeric 22 strand (22,24) ... |
66-806 |
2.25e-66 |
|
TonB dependent/Ligand-Gated channels are created by a monomeric 22 strand (22,24) anti-parallel beta-barrel. Ligands apparently bind to the large extracellular loops. The N-terminal 150-200 residues form a plug from the periplasmic end of barrel. Energy (proton-motive force) and TonB-dependent conformational alteration of channel (parts of plug, and loops 7 and 8) allow passage of ligand. FepA residues 12-18 form the TonB box, which mediates the interaction with the TonB-containing inner membrane complex. TonB preferentially interacts with ligand-bound receptors. Transport thru the channel may resemble passage thru an air lock. In this model, ligand binding leads to closure of the extracellular end of pore, then a TonB-mediated signal facillitates opening of the interior side of pore, deforming the N-terminal plug and allowing passage of the ligand to the periplasm. Such a mechanism would prevent the free diffusion of small molecules thru the pore.
Pssm-ID: 238657 [Multi-domain] Cd Length: 635 Bit Score: 232.73 E-value: 2.25e-66
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1189288138 66 PIDVISGDSLRSSGSSELGTVLARlIPSINFPRpslvDGAELTRPAQLRGLSPDQVLVLVlvlvlvNGKRRHTSafvnlg 145
Cdd:cd01347 1 SVSVITAEDIEKQPATSLADLLRR-IPGVSVTR----GGGGGGSTISIRGFGPDRTLVLV------DGLPLASS------ 63
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1189288138 146 gavgRGSAPADLNAIPLSAIDHIEVLRDGASARYGSDAIAGVINIILKSADH--GGSISSKYGQYKKGDGIQRQVSGNTG 223
Cdd:cd01347 64 ----NYGRGVDLNTIPPELIERVEVLKGPSSALYGSGAIGGVVNIITKRPTDefGGSVTAGYGSDNSGSSGGGGFDVSGA 139
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1189288138 224 FALGDNGTLNLSGegsnndyTNRAGDDFRTSSIGSTTYGQQVfrqgepQTHEGKLQYNaeysFNDAAEFYSFGGYSKRRG 303
Cdd:cd01347 140 LADDGAFGARLYG-------AYRDGDGTIDGDGQADDSDEER------YNVAGKLDWR----PDDDTRLTLDAGYQDQDA 202
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1189288138 304 ETA----AFYRPSNASNNIAAIYPNGYLPLINGTLEDTSLVAGLRGELADDWH-YDVSANYGKNTYELRTKTINTSLGLN 378
Cdd:cd01347 203 DGPggtlPANGTGSSLGGGPSSNTNGDRDWDYRDRYRKRASLGLEHDLNDTGWtLRANLSYSYTDNDGDPLILNGGNNAA 282
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1189288138 379 TPRSFDNGTLTN-DQKQLGFDLSREFSAAWLPHPVSVSFGAEYLHQgyqieagqaesyfqtgssglggfraadagSYSRH 457
Cdd:cd01347 283 GGDLGRSGYSSErDTTQLGFDAGLNAPFGTGPVAHTLTLGVEYRRE-----------------------------ELDEK 333
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1189288138 458 NFAQYLDVETNLTEKLGVSAAVRHEDY--------------SDFGSNVSGSLSARYDFTPQVALRGSVSTGFRAPSLAQQ 523
Cdd:cd01347 334 QTALYAQDTIELTDDLTLTLGLRYDHYdqdskdtiaggttaKKSYSHWSPSLGLVYKLTDGLSLYASYSQGFRAPSLGEL 413
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1189288138 524 NFTFTSSqligntiqeagtfpagsnVAQLLGAEDLKPEKSRNYSLSLVLQPLDSLTVTADVYRIDIQDRISLSSNLVLNN 603
Cdd:cd01347 414 YGGGSHG------------------GTAAVGNPNLKPEKSKQYELGLKYDPGDGLTLSAALFRIDIKNEIVSTPTNTGLG 475
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1189288138 604 TAINYlrsngvgdinytsaryfTNATDTSTDGVDLVANYRyqFDNGVRWnsTVGYNYNHTKVTDVKANPAildqlgvnlv 683
Cdd:cd01347 476 LVTVY-----------------VNGGKARIRGVELEASYD--LTDGLGL--TGSYTYTDTEVKRTDGATT---------- 524
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1189288138 684 rvdrreriGLLGDTTPQHKLTLGND--LTFGNWALHSNLVRYGEFTSYQADKVKDQTFSAAWLLDLAVDYTL-KNWVFTL 760
Cdd:cd01347 525 --------GNRLPGIPKHTANLGLDyeLPDEGLTAGGGVRYRGKQYADTANGNNTVKVPGYTLVDLSASYQFtKNLTLRL 596
|
730 740 750 760
....*....|....*....|....*....|....*....|....*.
gi 1189288138 761 GGDNITDKypeklnDFSSSGGNLAYSTFSPYGYsGAFYYGKVTYNW 806
Cdd:cd01347 597 GVNNLFDK------DYYTSLSVRGSGLYGYYGP-GRTYYLSVSYKF 635
|
|
| CirA |
COG1629 |
Outer membrane receptor protein, Fe transport [Inorganic ion transport and metabolism]; |
45-769 |
8.67e-48 |
|
Outer membrane receptor protein, Fe transport [Inorganic ion transport and metabolism];
Pssm-ID: 441236 [Multi-domain] Cd Length: 644 Bit Score: 180.41 E-value: 8.67e-48
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1189288138 45 LSTVIVTGTRAQERTASASLSpIDVISGDSLRSSGSSELGTVLaRLIPSINFPRPSLVDGAEltrpaQLRGLSpdqvLVL 124
Cdd:COG1629 1 LEEVVVTATRTDESLQDVPGS-VSVISREQLEDQPATDLGDLL-RRVPGVSVTSAGGGAGQI-----SIRGFG----GGG 69
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1189288138 125 VLVLVLVNGKRRHTSAFVNlggavgrgsapADLNAIPLSAIDHIEVLRDGASARYGSDAIAGVINIILKSADHG--GSIS 202
Cdd:COG1629 70 NRVLVLVDGVPLNDPSGGD-----------GGLSYIDPEDIERVEVLRGPSSALYGSGALGGVINIVTKKPKDGkgGEVS 138
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1189288138 203 SKYGQYkkgDGIQRQVSGNTGfalGDNGTLNLSgegsnndYTNRAGDDFRTSSigsttygqqvfrQGEPQTHEGKLQYNa 282
Cdd:COG1629 139 ASYGSY---GTYRASLSLSGG---NGKLAYRLS-------ASYRDSDGYRDNS------------DSDRYNLRAKLGYQ- 192
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1189288138 283 eysFNDAAEFYSFGGYSKRRGETAAFyrPSNASNNIAAIYPNGYLPLINGTLEDTSLVAGLRGE---LADDWHYDVSANY 359
Cdd:COG1629 193 ---LGDDTRLTLSASYSDSDQDSPGY--LTLAALRPRGAMDDGTNPYSNDTDDNTRDRYSLSLEyehLGDGLKLSASAYY 267
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1189288138 360 GKNTYELRTKTINTSLGLNTPRSFDngtltNDQKQLGFDLSREFSAAWlPHPVSVSFGAEYLHQGYQieagQAESYFQTG 439
Cdd:COG1629 268 RYDDTDLDSDFTPTPADGGTLEQTD-----FDNRTYGLELRLTYDLGF-GGKHTLLVGLDYQRQDLD----GSGYPLDLG 337
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1189288138 440 SSGLGGFRAADAGSYSRHNFAQYLDVETNLTEKLGVSAAVRHEDYSDFG----------------SNVSGSLSARYDFTP 503
Cdd:COG1629 338 SGSLPTLTSGADDDGTTTSLALYAQDTYKLTDKLTLTAGLRYDYVSYDVddtvtgtdsasgsrsySAFSPSLGLTYQLSP 417
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1189288138 504 QVALRGSVSTGFRAPSLAQQNFTFTSSQLIGNTiqeagtfpagsnvaqllgaeDLKPEKSRNYSLSLVLQPLD-SLTVTA 582
Cdd:COG1629 418 NLSLYASYSRGFRAPTFGELYANGTDPYSVGNP--------------------DLKPETSTNYELGLRYRLLDgRLSLSL 477
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1189288138 583 DVYRIDIQDRIslssnlvlnntaINYLRSNGVGdinytSARYFTNATDTSTDGVDLVANyrYQFDNGvrWNSTVGYNYNH 662
Cdd:COG1629 478 ALFYSDVDNEI------------LSVPLPNDSG-----FSTYYTNAGKARSYGVELELS--YQLTPG--LSLNASYSYTD 536
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1189288138 663 TKVTDVKANPAILDqlGVNLVRVdrrerigllgdttPQHKLTLGNDLTF-GNWALHSNLVRYGEFtsYQADKVKDQTFSA 741
Cdd:COG1629 537 AKFDDDTDGSADLD--GNRLPGV-------------PPLTANLGLTYEFpGGWSLGLGVRYVGDR--YLDDANTQGAPGG 599
|
730 740
....*....|....*....|....*....
gi 1189288138 742 AWLLDLAVDYTL-KNWVFTLGGDNITDKY 769
Cdd:COG1629 600 YTLVDLGAGYRFgDNLTLSLGVDNLFDKK 628
|
|
| FecA |
COG4772 |
Outer membrane receptor for Fe3+-dicitrate [Inorganic ion transport and metabolism]; |
18-768 |
3.56e-35 |
|
Outer membrane receptor for Fe3+-dicitrate [Inorganic ion transport and metabolism];
Pssm-ID: 443804 [Multi-domain] Cd Length: 681 Bit Score: 142.76 E-value: 3.56e-35
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1189288138 18 LLSVACISASAHAAQAtdeqnsqgASTLSTVIVTGTRAQERTASASLSPIDVISGDSLRSSGSSELGTVLARlIPSINFp 97
Cdd:COG4772 4 ALAAALLLAAAAAAEA--------ATTLETVVVTGSRAAEARLKDVPGSVSVVDREELENQAATSLREVLRR-VPGVNV- 73
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1189288138 98 RPSlvDGAELtRPA-QLRGLSPdqvlvlvlvlvlvngkRRhtSAFVNL--GG---AVGRGSAPADLNAIPLSAIDHIEVL 171
Cdd:COG4772 74 QEE--DGFGL-RPNiGIRGLGP----------------RR--SRGITLleDGipiAPAPYGDPAAYYFPDLERMERIEVL 132
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1189288138 172 RDGASARYGSDAIAGVINIILKSA--DHGGSISSKYGQ--YKKGDGIQRQVSGNTGFALgdngtlnlsgegsnnDYTNRA 247
Cdd:COG4772 133 RGAAALRYGPQTVGGAINFVTRTIptAFGGELRVTGGSfgYRRTHASVGGTVGNFGYLV---------------EYSRKR 197
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1189288138 248 GDDFRtssigsttygqqvfrqgePQTHEGKLQYNA--EYSFNDAAEFYSFGGYSKRR-----GETAAFYRpSNASNNiaa 320
Cdd:COG4772 198 GDGFR------------------DNSGFDINDFNAklGYRLSDRQELTLKFQYYDEDantpgGLTDAQFD-ADPRQS--- 255
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1189288138 321 iypngYLPLINGTLEDTSLVAGLRGELADDWHYDVSANYGKNT------YELRTKTINTSLGLNTPRSFDNgtltndqkq 394
Cdd:COG4772 256 -----YRPADQFDTRRTQLSLRYEHQLSDNTTLTTTAYYNDFSrnwyirQNTADPNTPGLGLRGNPRGYRS--------- 321
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1189288138 395 LGFDLSREFSAAWLPHPVSVSFGAEYLHQgyQIEAGQAESYFQTGSSGLGGFRAADagsYSRHNFAQYLDVETNLTEKLG 474
Cdd:COG4772 322 YGIEPRLTHRFELGGVPHTLEVGLRYHRE--EEDRKQYVNTYGQGRSGAGLRRDRR---FSADALAAYAQNRFELTGRLT 396
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1189288138 475 VSAAVRHEDYS---------DFGSNVSGS---------LSARYDFTPQVALRGSVSTGFRAPSLAQQNFTFTSSQlignt 536
Cdd:COG4772 397 LTPGLRYEHIRrdrtdrystRTGGDDSGSnsyseflpgLGLLYQLTDNLQLYANVSRGFEPPTFGDLAYGNGGNP----- 471
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1189288138 537 iqeagtfpagsnvaqllgaeDLKPEKSRNYSLSLVLQPLDSLTVTADVYRIDIQDRIslssnlvlnntaINYLRSNGVGD 616
Cdd:COG4772 472 --------------------DLKPEKSWNYELGTRGRIGNGLSAEVALFYIDYDNEL------------GSCSAAGGDRS 519
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1189288138 617 inytsarYFTNATDTSTDGVDLVANYRYQFDNGVRWNSTVGYNYNHTKVTDvkanpaildqlGVNLVRVDRRerigLLGd 696
Cdd:COG4772 520 -------TFTNAGETRHQGLELALDYDLLKGGGLGLPLFAAYTYTDAEFTS-----------DFGPVFAGNR----LPY- 576
|
730 740 750 760 770 780 790
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1189288138 697 tTPQHKLTLGNDLTFGNWALHSNLVRYGEFTSYQADKVKDQTFSAA---WLLDLAVDYTL-KNWVFTLGGDNITDK 768
Cdd:COG4772 577 -VPRHQLTAGLGYEHGGWTANLNGRYVSEQFTDAANTVADGSFGKIpsyTVLDLSASYDFgKNLSLFAGVNNLFDK 651
|
|
| TonB_dep_Rec |
pfam00593 |
TonB dependent receptor; This model now only covers the conserved part of the barrel structure. |
279-785 |
1.35e-30 |
|
TonB dependent receptor; This model now only covers the conserved part of the barrel structure.
Pssm-ID: 395474 [Multi-domain] Cd Length: 475 Bit Score: 126.42 E-value: 1.35e-30
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1189288138 279 QYNAEYSFNDAAEFYSFGGYSKRRGETAAFYRPSNASNNIAAIYPNGYLPLINGTLEDTSLVAGLRGELADDWHYDVSAN 358
Cdd:pfam00593 3 QLSLDLLGDDTLLTLGYDYSRYTDGLDLGLTLDGYGNDGGYLGDRPLYYGRDYSDTDRKRLSLGYDYDLGDGLSWLSTLR 82
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1189288138 359 YGKNTYELRTKTINTSLGLNTPRSFDNGTLTNDQKQLGFDLSREFSAAWlphpvSVSFGAEYLHQGYQIeagQAESYFQT 438
Cdd:pfam00593 83 LGLRYSSLDGDYTSNSSGLSGAGDYLSDDRLYGLYGLDGDLELSLDLSH-----DLLLGVELRTAGLDY---RRLDDDAY 154
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1189288138 439 GSSGLGGFRAADAGSYSRHNFAQYLDVETNLTEKLGVSAAVRHEDYSDFGSN--------------VSGSLSARYDFTPQ 504
Cdd:pfam00593 155 DPYDPANPSSSSYSDTTTDSYGLYLQDNIKLTDRLTLTLGLRYDHYSTDGDDgngggdnfsrsysaFSPRLGLVYKPTDN 234
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1189288138 505 VALRGSVSTGFRAPSLAQQNFTFTSsqligntiqeagtfpaGSNVAQLLGAEDLKPEKSRNYSLSLVLQPlDSLTVTADV 584
Cdd:pfam00593 235 LSLYASYSRGFRAPSLGELYGSGSG----------------GGGGAVAGGNPDLKPETSDNYELGLKYDD-GRLSLSLAL 297
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1189288138 585 YRIDIQDRISLSSNLVLNNTAINylrsngvgdinytsarYFTNATDTSTDGVDLVANYRyqfdngvRWNSTVGYN-YNHT 663
Cdd:pfam00593 298 FYIDIKNLITSDPDGPGLGGTVY----------------TYTNVGKARIRGVELELSGR-------LWGLGLSGGgYTYT 354
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1189288138 664 KVTDVKANPAILDQLgvnlvrvdrrerigllgDTTPQHKLTLGNDLTF--GNWALHSNLVRYGEFTSYQADKVKDQTFSA 741
Cdd:pfam00593 355 DADDDADADDTGNPL-----------------PNVPRHTANLGLTYDFplGGWGARLGARYVGSGERRYGDAANTFKTPG 417
|
490 500 510 520
....*....|....*....|....*....|....*....|....*
gi 1189288138 742 AWLLDLAVDYTL-KNWVFTLGGDNITDKYPEKLNDFSSSGGNLAY 785
Cdd:pfam00593 418 YTLVDLSAGYRLnKNLTLRLGVNNLFDKYYKRYYSSGGGNLGGYP 462
|
|
| TonB-hemlactrns |
TIGR01786 |
TonB-dependent hemoglobin/transferrin/lactoferrin receptor family protein; This model ... |
149-785 |
2.14e-24 |
|
TonB-dependent hemoglobin/transferrin/lactoferrin receptor family protein; This model represents a family of TonB-dependent outer membrane receptor/transporters acting on iron-containing proteins such as hemoglobin, transferrin and lactoferrin. Two subfamily models with a narrower scope are contained within this model, the heme/hemoglobin receptor family protein model (TIGR01785) and the transferrin/lactoferrin receptor family model (TIGR01776). Accessions which score above trusted to this model while not scoring above trusted to the more specific models are most likely to be hemoglobin transporters. Nearly all of the species containing trusted hits to this model have access to hemoglobin, transferrin or lactoferrin or related proteins in their biological niche. [Transport and binding proteins, Cations and iron carrying compounds, Transport and binding proteins, Porins]
Pssm-ID: 273808 [Multi-domain] Cd Length: 715 Bit Score: 109.04 E-value: 2.14e-24
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1189288138 149 GRGSAPADLNAIPLSAIDHIEVLRDGASARYGSDAIAGVINIILKSAD---HGGSisSKYGQYKKG-DGIQRQVSGNTGF 224
Cdd:TIGR01786 89 GQGSTFYAINSIDPELIKSIEIVKGASSSLYGSGALGGVVAFRTKDAAdllKPGK--DLGGLSKLGySSANNRFTQSVAA 166
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1189288138 225 AL-GDN------GTLNLSGEGSNNDYTNrAGDDFRTSSIGSTTYGQQVFRqgepqtheGKLQYnaeySFNDAAEFYSFGG 297
Cdd:TIGR01786 167 AGrNDDvdalvqATYRRGHELKNGNKAN-IGNESKRSKPNPSDYKSQSFL--------AKLGW----QLNDAHRLGLSLE 233
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1189288138 298 YSKRRGETAAFYRPSNASNNIAAIYPNGYLPLINGT--LEDTSLVAGLRGElaDDWHYDVSANYGKNTYELRTKTINTSL 375
Cdd:TIGR01786 234 YTQTDYDEPEMTNTSYLTKPLGAPLLSSTVVLGDSKtrDRRTGLDYELNPD--NSWLDTVKLALDKQYIQLYNYLNATSA 311
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1189288138 376 GlnTPRSFDNGTLTNDQKQ---LGFDLsrEFSAAWLPHPVSVSFGAEYLHQGYQIEAGQAEsyFQTGSSGLGGFRAaDAG 452
Cdd:TIGR01786 312 S--DYPGVDKNGRYKDKYDyytLGFDT--NNKIEFSVHSLSLTYGLDRFKDKVSTGDSRRN--LPTAAYNLYGYEG-ENR 384
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1189288138 453 SYSRHNFAQYLDVETNLTEKLGVSAAVR--------------HEDYSDFGSNV-SGSLSARYDFTPQVALRGSVSTGFRA 517
Cdd:TIGR01786 385 PVKGSNFGLFLQDNIKLGDWLSLSAGLRydhyktdpkadeskDYGAISKTYSRwSPSLGLTYKPTPWLTLYYSYSQGFRA 464
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1189288138 518 PSLAQQNFTFTssqligntiqeagtfPAGSNVAQLLGAEDLKPEKSRNYSLSLVLQpLDSLTVTADVYRIDIQDRISLSS 597
Cdd:TIGR01786 465 PSFDELYGTGA---------------HPGGGPYTFLPNPNLKPETSKNWEIGINLH-FDQLDFKVSYFRNDYKDFIDLGI 528
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1189288138 598 nlvLNNTAINYlrsNGVGDINYTSaryFTNATDTSTDGVDLVANYRYQFDNGVRWNSTVGYNYNHTKVTDVKANPAildq 677
Cdd:TIGR01786 529 ---GVTAKGNM---AQVGSNTITN---YVNIDNARIRGIELSGRYDLGSFFSGPDGWTTTLKYGYTKGKDSDTNPW---- 595
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1189288138 678 lgvnLVRVDRRERIGLLGDTTPQHKLTLGNDLTFgnWALHSNLVRYGEFTSYQADKVKDQTFSAAW-LLDLAVDYTL-KN 755
Cdd:TIGR01786 596 ----LNAITPLKVVLGLGYDHPDEKWGVGLTLTF--SGAKDAVDAYATYYENGEAAKAGPLRTPSYtVVDLYGYYKPnKN 669
|
650 660 670
....*....|....*....|....*....|.
gi 1189288138 756 WVFTLGGDNITD-KYPEKLNDFSSSGGNLAY 785
Cdd:TIGR01786 670 LTLRFGVYNLLDrKYTTWESARQAGPLATGY 700
|
|
| Fiu |
COG4774 |
Outer membrane receptor for monomeric catechols [Inorganic ion transport and metabolism]; |
158-768 |
9.31e-24 |
|
Outer membrane receptor for monomeric catechols [Inorganic ion transport and metabolism];
Pssm-ID: 443806 [Multi-domain] Cd Length: 639 Bit Score: 106.89 E-value: 9.31e-24
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1189288138 158 NAIPLSAIDHIEVLRDGASARYGSDAIAGVINIILKSA--DHGGSISSKYGQYKkgdgiQRQVSGNTGFALGDNGTLNLS 235
Cdd:COG4774 74 YRRDTFNLERVEVLKGPASVLYGRGSPGGVINLVTKRPtdEPFTEVTLTYGSDG-----QRRATLDVNGPLGDDLAYRLN 148
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1189288138 236 GEGSNNDyTNRAGDDFRTSSI-GSTTYGqqvfrqgepqthegklqynaeysFNDAAEFYSFGGYSKRRGeTAAFYRPSNA 314
Cdd:COG4774 149 GMYRDSD-SYRDGVDNDRWGIaPSLTWR-----------------------LGDRTRLTLDYEYQDDDR-TPDYGVPAVA 203
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1189288138 315 SNNIAAIYPNGYLPLINGTLEDTSLVAGLRGE--LADDWHYDVSANYGKNTYELRTKTINTSLGLNT-PRSFDNGTLTND 391
Cdd:COG4774 204 NGRPVDVDRSTFYGQPDDYSDSETDSATLRLEhdFNDNWTLRNALRYSDYDRDYRNTYPTGGNATGTvTRSAYRRDQDND 283
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1189288138 392 QKQLGFDLSREFSAAWLPHpvSVSFGAEYLHQGYQIEAGQAESYFQTGS-------SGLGGFRAADAGSYSR-HNFAQYL 463
Cdd:COG4774 284 TLSNQTDLTGKFDTGGVKH--TLLAGVEYSREDSDNARYSGGGTAPTVNlynpvygAPVTGPTLGGADNDSRtDTTGLYL 361
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1189288138 464 DVETNLTEKLGVSAAVRHE----DYSDFGSN----------VSGSLSARYDFTPQVALRGSVSTGFRapslaqqnftfts 529
Cdd:COG4774 362 QDTISLTDRWSLLAGLRYDrfdtDYTDRTTGattssyddsaFSPRAGLVYKPTPNLSLYASYSTSFN------------- 428
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1189288138 530 sqligntiqeagtfPAGSNVAQLLGAEDLKPEKSRNYSLSLVLQPLD-SLTVTADVYRIDIQdrislssNLVLNNTainy 608
Cdd:COG4774 429 --------------PGGGAPSLSNAGQALDPEKSRQYEVGVKWDLLDgRLSLTAALFRIEKT-------NVRTTDP---- 483
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1189288138 609 lrsngvgdinyTSARYFTNATDTSTDGVDLVANYRYqfdnGVRWNSTVGYNYNHTKVTDvkanpaildqlGVNLVRVDRR 688
Cdd:COG4774 484 -----------ANPGVYVQTGEQRSRGVELEATGEL----TPGWSVLAGYTYLDAEITK-----------SANAANVGNR 537
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1189288138 689 erigLLGdtTPQHKLTLGN--DLTFGNWALHSNLVRYGEFTSYQADKVKdqtFSAAWLLDLAVDYTL-KNWVFTLGGDNI 765
Cdd:COG4774 538 ----LPN--VPRHSASLWTtyDLPLPGLTLGGGVRYVGSRYADAANTVK---LPSYTRFDAGASYRLnKNLTLRLNVNNL 608
|
...
gi 1189288138 766 TDK 768
Cdd:COG4774 609 TDK 611
|
|
| PRK13513 |
PRK13513 |
ligand-gated channel protein; |
15-594 |
1.10e-23 |
|
ligand-gated channel protein;
Pssm-ID: 184104 [Multi-domain] Cd Length: 659 Bit Score: 106.78 E-value: 1.10e-23
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1189288138 15 SANLLSVACISASAHAAQATDEqnsqgASTLSTVIVTGTRAQERTASASLSpIDVISGDSLRSSGSSELGTVLaRLIPSI 94
Cdd:PRK13513 10 KAALVIAAAISSQAYAAEKTNT-----ATPTDTMVVTASGFQQRIQDAPAS-ISVVTREQLENKAYRDVTDAL-KDVPGV 82
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1189288138 95 nfprpsLVDGAELTRPAQLRGLSPdqvlvlVLVLVLVNGKRRHTsafvnlggavgRGSAP-ADLNAI------PLSAIDH 167
Cdd:PRK13513 83 ------VVTGGGSTSDISIRGMAA------KYTLILVDGKRVDT-----------RSTRPnSDGSGIeqgwlpPLAAIER 139
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1189288138 168 IEVLRDGASARYGSDAIAGVINIILKSADHG--GSISSKYG-QYKKGDGIQRQVSGNTGFALGDNgtlnLSGEGSNNDYT 244
Cdd:PRK13513 140 IEVVRGPMSSLYGSDAMGGVINIITRKVQKEwhGSLRADATlQEDSKSGDIFQTNAYASGPLIDG----LLGLKVSGLLS 215
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1189288138 245 NRAGDDFrtssIGSttYGQQVFRQGepqthegklqyNAEYSF--NDAAEF-YSFGGYSKRRGETAAFYRPSNASNNIAAI 321
Cdd:PRK13513 216 HRSEDKI----IDG--YNEQRMRNG-----------TATFSLtpDDNNEFdFEIGRYVQDRNSTPGRTLALNGTNSDTQY 278
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1189288138 322 YPNGYLPLINGTLEDTSLvaglrgeladdwhydvsanygkNTYELRTKTINTSLGLNTprsfdNGTLTNDQKQLGFDlsr 401
Cdd:PRK13513 279 DRNNYAITHNGYYDFGNS----------------------TSYIQRDETRNPSRQMKS-----VDTIFNTQTSFLLD--- 328
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1189288138 402 efsaawlPHpvSVSFGAEYLHQGYQIEAGQAESyfqtgssglggfrAADAGSYSRHNFAQYLDVETNLTEKLGVSAAVRH 481
Cdd:PRK13513 329 -------DH--TLSLGGQYRYEELYDKGNQLPS-------------ASDLNKLTRWSWALFAEDEWQMTNDFALTGGIRM 386
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1189288138 482 EDYSDFGSNVSGSLSARYDFTPQVALRGSVSTGFRAPSLAQQnfTFTSSQLIGntiqeagtfpAGSNVAQLLGAEDLKPE 561
Cdd:PRK13513 387 DQDQNYGTHWTPRLYGVWHLADQWTLKGGVSTGYRSPDLRQA--TDNWGQLTG----------GGGLPALILGNSDLKPE 454
|
570 580 590
....*....|....*....|....*....|...
gi 1189288138 562 KSRNYSLSLVLQPLDSLTVTADVYRIDIQDRIS 594
Cdd:PRK13513 455 KSISQEIGILWDNQENLNASVTLFNTDFKDKIT 487
|
|
| PRK13483 |
PRK13483 |
ligand-gated channel protein; |
11-594 |
2.06e-23 |
|
ligand-gated channel protein;
Pssm-ID: 184080 [Multi-domain] Cd Length: 660 Bit Score: 106.01 E-value: 2.06e-23
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1189288138 11 TAIFSANLLSVACISASAHAAQAtdEQNSQGASTLSTVIVT--GTRAQERTASASLSpidVISGDSLRSSGSSELGTVLa 88
Cdd:PRK13483 1 MKKYLAQVISALCLLPAVFVTHA--LAQAAPDKTMETVVVTasGYEQQIRDAPASIS---VITREDLENRFYRDLTDAL- 74
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1189288138 89 RLIPSINfprpslVDGAELTRPAQLRGLSPDqvlvlvLVLVLVNGKR---RHTSAFVNlGGAVGRGSAPadlnaiPLSAI 165
Cdd:PRK13483 75 LDVPGVV------VTGGGDRTDISLRGMGSQ------YTLILVDGKRqssRETRPNSD-GPGVEQAWTP------PLAAI 135
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1189288138 166 DHIEVLRDGASARYGSDAIAGVINIIL-KSADHGgsisskYGQYKKGDGIQ-RQVSGN--------TGFALGDNGTLNLS 235
Cdd:PRK13483 136 ERIEVIRGPMSSLYGSDAIGGVINIITrKVPNEW------QGEVRLDTTLQeNSDSGNvyqanffvNGPLIKDLLGLQLY 209
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1189288138 236 GEgsnndYTNRAGDD----FRTSSIGSTT--YGQQVFRQGEPQTHEGKLQYNAEYSFNDAAEFYSFGGYSKRRGEtaafy 309
Cdd:PRK13483 210 GQ-----YTQREEDDieggYRDKDARSLTakLALTPNEDHDIMLEVGTSNQERDSTVGKTVAPLAPGESCGRRGC----- 279
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1189288138 310 rPSNASNNiaaiYPNGYLPLI-NGtledtslvaglrgeladDWHYDVSanygkNTYELRTKTINTSLGLntprSFDNgtl 388
Cdd:PRK13483 280 -PESSTTE----YERSTVSLShTG-----------------RWDFGTS-----DTYIQHEEFDNKSREM----KIKN--- 325
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1189288138 389 TNDQKQLGFDLSREfsaawlpHpvSVSFGAEYLHQGYQIEAGQaesyfqtgssglggfRAADAGSYSRHNFAQYLDVETN 468
Cdd:PRK13483 326 TDFQSSLVAPLGQE-------H--TLTFGAAYNHQDLTDETSN---------------QISDLTDISRTQWAVFSEDEWR 381
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1189288138 469 LTEKLGVSAAVRHEDYSDFGSNVSGSLSARYDFTPQVALRGSVSTGFRAPSLAQqnftftssqlignTIQEAGTFPAGSN 548
Cdd:PRK13483 382 IADDFALTGGLRLDHDENFGGHVSPRVYGVWNLAPSWTVKGGVSTGFRAPSLRQ-------------TTPDWGQVSRGGN 448
|
570 580 590 600
....*....|....*....|....*....|....*....|....*.
gi 1189288138 549 VaqlLGAEDLKPEKSRNYSLSLVLQPLDSLTVTADVYRIDIQDRIS 594
Cdd:PRK13483 449 I---YGNPDLKPETSLNKELGLYYDLGSGLTASLTVFYNEFKDKIT 491
|
|
| FhuE |
COG4773 |
Outer membrane receptor for ferric coprogen and ferric-rhodotorulic acid [Inorganic ion ... |
18-769 |
2.31e-23 |
|
Outer membrane receptor for ferric coprogen and ferric-rhodotorulic acid [Inorganic ion transport and metabolism];
Pssm-ID: 443805 [Multi-domain] Cd Length: 692 Bit Score: 105.75 E-value: 2.31e-23
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1189288138 18 LLSVACISA-SAHAAQATDEQNSQGASTLSTVIVTGTRAQE------RTASASLSP---------IDVISGDSLRSSGSS 81
Cdd:COG4773 4 LLAGSGLAAaAAGALAQAAAAAAAEATTLPEVTVTGTAEGTggytakSSSTATKLDtplretpqsVSVVTRQLIEDQGAT 83
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1189288138 82 ELGTVLaRLIPSINfprPSLVDGAELTRPaQLRGLSPDqvlvlvlvlvlvngkrrhtSAFVNlggavGRGSAPADLNAIP 161
Cdd:COG4773 84 TLDDAL-RNVPGVT---VSSYDGGGRDSF-SIRGFSID-------------------NYLRD-----GLPLGGFGGGQPD 134
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1189288138 162 LSAIDHIEVLRDGASARYGSDAIAGVINIILK--SADHGGSISSKYGQYKkgdgiQRQVSGNTGFALGDNGT----LNLS 235
Cdd:COG4773 135 TANLERVEVLKGPAGLLYGAGSPGGLVNLVTKrpTAEPQGEVSLSAGSWD-----TYRATADVGGPLNEDGTlryrLNAA 209
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1189288138 236 GEGSNNdYTNRAGDDfRTSSIGSTTYgqqvfrQGEPQThegKLQYNAEYSFNDAAEFYSFGGYSKRRGETAAFYRPSNAS 315
Cdd:COG4773 210 YEDGDS-FRDGVDNR-RTLIAPSLDW------DLTDDT---TLTLGAEYQDDDSTGDRGFLPLDGTLLDLPRSTNLGEPW 278
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1189288138 316 NNIaaiypngylplingTLEDTSLVAGLRGELADDWHYDVSANYGKNTYELRTKTINTSLGLNT---PRSFDNGTLTNDQ 392
Cdd:COG4773 279 DYY--------------DTETTTLFAELEHRFNDDWSLRANARYSDSDRDGRSAYAYGAPDAATgtlTRYASARDGDSRS 344
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1189288138 393 KQLGFDLSREFSAAWLPHpvSVSFGAEYLHQGYQIEAGQAESY----FQTGSSGLGGFRAADAGSYSRhNFAQYLDVETN 468
Cdd:COG4773 345 DSLDANLNGKFETGGLEH--TLLVGADYSRYDSDSDSATAGTIniynPVYGNLPEPDFDASDTDTTTR-QTGLYAQDQIS 421
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1189288138 469 LTEKLGVSAAVRHEDYSDFGSNVSGSLSAR-------------YDFTPQVALRGSVSTGFRAPSlaqqnftftssqlign 535
Cdd:COG4773 422 LTDRLSLLLGGRYDWYETDSTNRLGGSTTSyddsaftpraglvYDLTPGLSLYASYSESFEPQS---------------- 485
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1189288138 536 tiqeaGTFPAGsnvaqllgaEDLKPEKSRNYSLSLVLQPLDS-LTVTADVYRIDIQDRislssnLVLNNTAINYLRSNGv 614
Cdd:COG4773 486 -----GADNNG---------NPLDPETGKQYEAGVKGELFDGrLNATLAVFDITQKNV------ATTDPDNPNFYVQVG- 544
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1189288138 615 gdinytsaryftnatDTSTDGVDLVANYRYqFDNgvrWNSTVGYNYNHTKVTDvkanpaildqlgvnlvrvDRRERIGLL 694
Cdd:COG4773 545 ---------------EVRSRGVELELSGEL-TPG---LNLIAGYTYTDAKITK------------------DADALEGKR 587
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1189288138 695 GDTTPQHKLTLGNDLTFGNWALhSNL-----VRYgeFTSYQADKVKDQTFSAAWLLDLAVDYTL-KNWVFTLGGDNITDK 768
Cdd:COG4773 588 LTNVPRHTASLWTTYRFPSGAL-KGLglgggVRY--VGERYGDAANTFTLPSYTLVDAGARYDLgKNWTLQLNVNNLFDK 664
|
.
gi 1189288138 769 Y 769
Cdd:COG4773 665 K 665
|
|
| PRK10064 |
PRK10064 |
catecholate siderophore receptor CirA; Provisional |
13-664 |
2.34e-22 |
|
catecholate siderophore receptor CirA; Provisional
Pssm-ID: 236646 [Multi-domain] Cd Length: 663 Bit Score: 102.66 E-value: 2.34e-22
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1189288138 13 IFSANLLSVACISASAHAAQATDEQNSQGASTLsTVIVTGTRAQERTASASLSpidVISGDSLRSSGSSELGTVLaRLIP 92
Cdd:PRK10064 1 MFRLNPFVRVGLCASAISCAWPVLAVDDDGETM-VVTASAVEQNLKDAPASIS---VITQEDLQRKPVQNLKDVL-KEVP 75
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1189288138 93 SInfprpSLVDGAELTRPAQLRGLSpdqvlvLVLVLVLVNGKRrhtsafVNLGGAVGRGSaPADLNAIPLSAIDHIEVLR 172
Cdd:PRK10064 76 GV-----QLTNEGDNRKGVSIRGLD------SSYTLILIDGKR------VNSRNAVFRHN-DFDLNWIPVDAIERIEVVR 137
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1189288138 173 DGASARYGSDAIAGVINIILKSAD---HGGSISSKYGQYKKGDGIQRQVSGNTGFALGDnGTLNLSGEGSnndYTNRAGD 249
Cdd:PRK10064 138 GPMSSLYGSDALGGVVNIITKKIGqkwHGTVTVDTTIQEHRDRGDTYNGQFFTSGPLID-GVLGMKAYGS---LAKREKD 213
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1189288138 250 DFRTSSIGSTtygqqvfrqGEPQTHEG--KLQYNAEYSF--NDAAEFYSFGGYSKRRGETAAFYRPSNASNNIAAIYpNG 325
Cdd:PRK10064 214 DPQNSTTTDT---------GETPRIEGftSRDGNVEFAWtpNQNHDFTAGYGFDRQDRDSDSLDKNRLERQNYSLSH-NG 283
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1189288138 326 YLPLINGTLEdtslvagLRGELADDwhydvsaNYGKNTYELRTKTINTSLGLNTPRSFDNGTLTndqkqlgfdlsrefsa 405
Cdd:PRK10064 284 RWDYGNSELK-------YYGEKVEN-------KNPGNSSPITSESNSIDGKYTLPLTAINQFLT---------------- 333
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1189288138 406 awlphpvsvsFGAEYLHQGYQieagqaESYFQTGssglGGFRAADAGSYsrhnfAQYLDVETNLTEKLGVSAAVRHEDYS 485
Cdd:PRK10064 334 ----------FGGEWRHDKLS------DAVNLTG----GTSSKTSASQY-----ALFVEDEWRIFEPLALTTGVRMDDHE 388
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1189288138 486 DFGSNVSGSLSARYDFTPQVALRGSVSTGFRAPSLAQQNFTFTSSQLIGNtiqeagtfpagsnvAQLLGAEDLKPEKSRN 565
Cdd:PRK10064 389 TYGDHWSPRAYLVYNATDTVTVKGGWATAFKAPSLLQLSPDWTSNSCRGA--------------CKIVGSPDLKPETSES 454
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1189288138 566 YSLSLVLQP----LDSLTVTADVYRIDIQDRISLS--SNLVLNNTAINYLRSNGVGDINYTSARYFTNATDTSTDGVDlv 639
Cdd:PRK10064 455 WELGLYYMGeegwLEGVESSVTVFRNDVDDRISISrtSDVNAAPGYQNFVGFETNGRGRRVPVFRYYNVNKARIQGVE-- 532
|
650 660
....*....|....*....|....*
gi 1189288138 640 ANYRYQFDNGvrWNSTVGYNYNHTK 664
Cdd:PRK10064 533 TELKIPFNDE--WKLSLNYTYNDGR 555
|
|
| TonB-hemin |
TIGR01785 |
TonB-dependent heme/hemoglobin receptor family protein; This model represents the ... |
45-742 |
9.91e-22 |
|
TonB-dependent heme/hemoglobin receptor family protein; This model represents the TonB-dependent outer membrane heme/hemoglobin receptor/transporter found in bacteria which live in contact with animals (which contain hemoglobin or other heme-bearing globins) or legumes (which contain leghemoglobin). Some species having hits to this model such as Nostoc, Caulobacter and Chlorobium do not have an obvious source of hemoglobin-like proteins in their biological niche and so the possibility exists that they act on some other substance. [Transport and binding proteins, Cations and iron carrying compounds, Transport and binding proteins, Porins]
Pssm-ID: 273807 [Multi-domain] Cd Length: 665 Bit Score: 100.54 E-value: 9.91e-22
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1189288138 45 LSTVIVTGTRaQERTASASLSPIDVISGDSLRSSGSSELGTVLARlIPSINFPRPSLVDGAELTrpaqLRGLSPDQVLVL 124
Cdd:TIGR01785 1 LDTVTVTATR-TRQVLSEAPASVSVISGEQIESKQANNLADALNT-VPGVDVTGGGRPPGQSIN----IRGLQDNRVLVV 74
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1189288138 125 VlvlvlvNGKRrhtSAFVNLGGAVGRgsapadlNAIPLSAIDHIEVLRDGASARYGSDAIAGVINIILKSA--------D 196
Cdd:TIGR01785 75 V------DGAR---QNYQRGGAHNGS-------LFVDPELLKRIEIVKGPSSSLYGSGALGGVVAFRTKDAadllrpgqL 138
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1189288138 197 HGGSISSKYGqykkGDGIQRQVSGNTGFALGDNGTLNLSgegsnndYTNRAGDDFRTSS---IGSTTYGQQVF----RQG 269
Cdd:TIGR01785 139 FGGLAKLSYG----SNNNSFGGSVAVAGRLDDNLDALVA-------ATYRDGGNYRNGNkeeATNSAYVQKNLlaklGWQ 207
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1189288138 270 EPQTHEGKLQY-NAEYSFNDAAEfySFGGYSKRRGETAAFYRPSNASNNIAAIYpnGYLPLINGTLEDTSLVAGLRGELa 348
Cdd:TIGR01785 208 LDDAQRLEFSYfTTEGSLDEAQN--SGPGTEYVLGSSSTLLASSTRDRSATLTY--NWTPEDNPWLDATASLYYNRTEN- 282
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1189288138 349 ddWHYDVSANYG-KNTYELRTKTIN----TSLGLNTPRSFDNGTLTNDQKQLGFDLSREFSAAWLPHPVSvsfGAEYLHQ 423
Cdd:TIGR01785 283 --DNDRSARGVGrEEGYQYTTYGATlqntSRFDVASWSTLTYGVDWMKDKRRTESFDPNSVTTIVPNPPS---AKEYFFG 357
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1189288138 424 GYqieaGQAESYFqtgssglggfraadagsysrhnfaqyldvetnLTEKLGVSAAVRH------------EDYSDFGSNV 491
Cdd:TIGR01785 358 LF----LQDNIPL--------------------------------LDDRLTLSAGLRYdhyklspkttadTEAVDRSYSR 401
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1189288138 492 -SGSLSARYDFTPQVALRGSVSTGFRAPSLAQQNFTftssqligntiqeaGTFPAGSNVAQLLGAEDLKPEKSRNY---- 566
Cdd:TIGR01785 402 wSPSLGLSYKPVDWLTLYASYSQGFRAPSIDELYGT--------------GDHPGTPGGYTFAPNPNLKPETSKTWelga 467
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1189288138 567 --SLSLVLQPLDSLTVTADVYRIDIQDRISLSSNLVLNNTAINYLRSNgvgdinytsaryFTNATDTSTDGVDLVANYRY 644
Cdd:TIGR01785 468 nlSFDNLLLDNDQLQFKVAYFYNDVKDFIDLTIGVTDNVTAGMNNITQ------------YVNIDGARIRGIEASASYDA 535
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1189288138 645 QfdngvRWNstVGYNYNHTKVTDVKANPAiLDQ-------LGVNLVRVDRRERIGLLGD-TTPQHKLTLGNDLTFGNWAL 716
Cdd:TIGR01785 536 G-----LWA--TGLSYGYTIGKDQNTNQW-LSNipplklvVTVGYRFPDRRLDLGAKAAyYERQSESPTTEDVAANGLLT 607
|
730 740
....*....|....*....|....*.
gi 1189288138 717 HSNLVRYGEFTSYQADKVKDQTFSAA 742
Cdd:TIGR01785 608 TPGYTVVDLYATYQPNAVKGLTVRFG 633
|
|
| TonB-siderophor |
TIGR01783 |
TonB-dependent siderophore receptor; This subfamily model encompasses a wide variety of ... |
150-769 |
1.65e-19 |
|
TonB-dependent siderophore receptor; This subfamily model encompasses a wide variety of TonB-dependent outer membrane siderophore receptors. It has no overlap with TonB receptors known to transport other substances, but is likely incomplete due to lack of characterizations. It is likely that genuine siderophore receptors will be identified which score below the noise cutoff to this model at which point the model should be updated. [Transport and binding proteins, Cations and iron carrying compounds, Transport and binding proteins, Porins]
Pssm-ID: 273805 [Multi-domain] Cd Length: 651 Bit Score: 93.25 E-value: 1.65e-19
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1189288138 150 RGSAPADLNAIPLSAIDHIEVLRDGASARYGSDAIAGVINIILKsadHGGSISSKYGQYKKGDGIQRQVSGNTGFALGDN 229
Cdd:TIGR01783 66 PLLSRGNLAIVDPAMVERVEVLRGPASLLYGGSAPGGVINIVTK---RPQDEPKGSVTFGAGTRSGYRTAFDLGGPLGAD 142
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1189288138 230 GTLNLSGEGSNNDYTN-RAGDDFRTSSIGSTTYGQQvfrqgEPQThegKLQYNAEYSfNDAAEFYSfGGYSKRRGEtaaf 308
Cdd:TIGR01783 143 GTFRGRLNGARQDGDSfYDGAGEETRLGATATDWQL-----DDRT---LLRLGAYYQ-KERDRGGY-GGLPASGGT---- 208
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1189288138 309 YRPSNASNNIAAIYPNGYLPlingTLEDTSLVAGLRGELADDWHYDVSANYGKNT----YELRTKTINTSLGLNtpRSFD 384
Cdd:TIGR01783 209 SGRDLSSDRYLGTSSNRNYD----DREYLSYGLSLEYQFNDVWTGKQNLRYSYFDtdsnQVQASGYSSDGGLFG--RSLT 282
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1189288138 385 NGTLTNDQKQLGFDLSREFSAAwlPHPVSVSFGAEYLHQGYQIEAGQAESYFQTGSSGLGGFRAADAGSY------SRHN 458
Cdd:TIGR01783 283 VVNVKQDRVQIDAGLDGEFETG--PIEHDLLLGVSYGQRTTNRFNNTGYPSDNIYSLTATSSARTDIGDSpkdralSSTT 360
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1189288138 459 FAQ---YLDVETnLTEKLGVSAAVRHE-------------DYSDFGSNVSGSLSARYDFTPQVALRGSVSTGFRAPSLAQ 522
Cdd:TIGR01783 361 KALngvALQRIL-LADKWTLTLGGRYDsvdvksnngvagsTGKRDDSQFTPSLGVAYKPTDDWSLYASYAESFKPGGYYP 439
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1189288138 523 QnftftssqligntiqeagtfpagsnvAQLLGAEDLKPEKSRNYSLSLVLQPLDSLTVTADVYRIDIQdrislssnlvln 602
Cdd:TIGR01783 440 K--------------------------GAGNSGDILEPEKGKNYELGVRYDLGDSLLATAALFRITKD------------ 481
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1189288138 603 ntaiNYLRSNGVGDINYtsaryfTNATDTSTDGVDLVANYRYQFDngvrWNSTVGYNYNHTKVTDVKANPAILDQLGvnl 682
Cdd:TIGR01783 482 ----NQLVQDPVNGTFS------VNAGKTRNRGVELEARGYLTPG----LSLSAGYTYTDAEFTEDTNGDTQGNTVP--- 544
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1189288138 683 vrvdrrerigllgdTTPQHKLTLGNDLTFGNWALHSNLVRYGEFT-SYQADKVKDQTFSAAWLLDLAVDYTL---KNWVF 758
Cdd:TIGR01783 545 --------------FVPKHTASLWASYAPPVGDNGLTLGGGVQYTgKAYVDGGNTGKVPSYTVVDLSVRYDLtkkKNLTL 610
|
650
....*....|.
gi 1189288138 759 TLGGDNITDKY 769
Cdd:TIGR01783 611 ALNVNNLFDRD 621
|
|
| PRK13524 |
PRK13524 |
FepA family TonB-dependent siderophore receptor; |
18-570 |
1.71e-19 |
|
FepA family TonB-dependent siderophore receptor;
Pssm-ID: 237410 [Multi-domain] Cd Length: 744 Bit Score: 93.56 E-value: 1.71e-19
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1189288138 18 LLSVACISASAHAAQATDEQNSQGASTLSTVIVTGTRaQERTASAslspIDVISGDSLRSSGSSELGTVLARLIPSINFP 97
Cdd:PRK13524 11 LVNLGIYGVAQAAEAEDAKTDDTPASHEDTIVVTAAE-QNLQAPG----VSTITAEDIRKRPPANDVSEIIRTMPGVNLT 85
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1189288138 98 RPSLVDGAELTRPAQLRGLSPDQVLVLVlvlvlvNGKRRHTSAFVNLGGAVGRGSApADLNAIPLSAIDHIEVLRDGASA 177
Cdd:PRK13524 86 GNSTSGQRGNNRQIDIRGMGPENTLILI------DGKPVSSRNSVRYGWRGERDTR-GDTNWVPPEMIERIEVLRGPAAA 158
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1189288138 178 RYGSDAIAGVINIILKSAD---HgGSISSKYGQYK-KGDGIQRQVSGNTGFALGDNGTLNLSGEGSNND----YTNRAGD 249
Cdd:PRK13524 159 RYGNGAAGGVVNIITKKPTgewH-GSWNTYFNAPEhKAEGATKRTNFSLSGPLGDELSFRLYGNLNKTQadawDINQGHQ 237
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1189288138 250 DFRTSSIGSTTYGQqvfRQG-EPQTHEGKLQYnaEYSFNDAAEFYsfGGYSkRRGETAAFYRPSNASNNIAA-------- 320
Cdd:PRK13524 238 SARTGSYAGTLPAG---REGvINKDINGLLRW--DFAPLQSLELE--AGYS-RQGNLYAGDTQNTNSDALVKslygketn 309
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1189288138 321 -IYPNGYLPLINGtledtslvaglrgeladDWHYDVSanygKNTYELRTKTINTSL--GL---------NTPRSFDNGTL 388
Cdd:PRK13524 310 rMYRQNYALTHRG-----------------GWDNGVS----TSNYAQYEHTRNSRLpeGLaggtegifnEKATQFSTIDL 368
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1189288138 389 TNdqkqlgFDLSREFS---AAWLPHpvSVSFGAEYLHQgyQIEAGQAESYFQTGSSGLGGFRAADAGSYSR-HNFAQYld 464
Cdd:PRK13524 369 DD------VMLHSEVNlpfDLLVNQ--TLTLGTEWNQQ--RMKDPSSNTQALTSGGAIPGVSATGRSPYSKaEIFSLF-- 436
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1189288138 465 VETN--LTEKLGVSAAVRHEDYSDFGSNVSGSLSARYDFTPQVALRGSVSTGFRAPSLAQQN---FTFTSSQligntiqe 539
Cdd:PRK13524 437 AEDNmeLTDSTMLTPGLRFDHHSIVGNNWSPSLNLSQGLGDDFTLKMGIARAYKAPNLYQTNpnyILYSKGQ-------- 508
|
570 580 590
....*....|....*....|....*....|.
gi 1189288138 540 aGTFPAGSNVAQLLGAEDLKPEKSRNYSLSL 570
Cdd:PRK13524 509 -GCYASAGNGCYLQGNDDLKAETSVNKEIGL 538
|
|
| BtuB |
COG4206 |
Outer membrane cobalamin receptor protein BtuB [Coenzyme transport and metabolism]; |
48-326 |
1.06e-18 |
|
Outer membrane cobalamin receptor protein BtuB [Coenzyme transport and metabolism];
Pssm-ID: 443355 [Multi-domain] Cd Length: 276 Bit Score: 87.23 E-value: 1.06e-18
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1189288138 48 VIVTGTRAqERTASASLSPIDVISGDSLRSSGSSELGTVLARLiPSINFPRPSLVDGAelTRPaQLRGLSPDQVLVLVlv 127
Cdd:COG4206 1 VVVTATRL-EQSKSDLTGSVTVIDAEELERSGATSLADALRRV-PGVQVSSSGGPGSA--ASI-SIRGLGSNQTLVLI-- 73
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1189288138 128 lvlvNGkrrhtsafVNLGGAVGRGsapADLNAIPLSAIDHIEVLRDGASARYGSDAIAGVINIILKSADHG--GSISSKY 205
Cdd:COG4206 74 ----DG--------VPLNDPSLGG---VDLSLIPPDDIERIEVLKGAASALYGSDAIGGVINITTKKGKKGfkGSVSASY 138
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1189288138 206 GQY--KKGDGIQRQVSGNTGFALG------DNGTLNLSGEGSNNDYTN---------RAGDDFRTSSIGSTTYGQQVFRQ 268
Cdd:COG4206 139 GSFgtRRLSASLSGGAGKFSYSLSasyrrsDGYRYNDPDLRNNDGYENtslnarlgyKLGDNGSLSLSGGYSDSERGYPG 218
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....*...
gi 1189288138 269 GEPQTHEGKLQYNAEYSFNDAAEFYSFGGYSKRRGETAAFYRPSNASNNIAAIYPNGY 326
Cdd:COG4206 219 AVGSDRNLRLSLSLEYKLSDGWSLLLLAYYYYDRDYEDGGGDSAGTSNTDGARAGLSY 276
|
|
| btuB |
PRK10641 |
TonB-dependent vitamin B12 receptor BtuB; |
19-599 |
2.71e-18 |
|
TonB-dependent vitamin B12 receptor BtuB;
Pssm-ID: 236730 [Multi-domain] Cd Length: 614 Bit Score: 89.28 E-value: 2.71e-18
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1189288138 19 LSVACISASAHAAQAtdeqnsqgastlSTVIVTGTRAQErTASASLSPIDVISGDSLRSSGSSELGTVLARLiPSIN--- 95
Cdd:PRK10641 11 LSVTAFSGWAQDTSP------------DTLVVTANRFQQ-PVSTVLAPTTVVTRDDIDRWQSKSVNDVLRRL-PGVDiaq 76
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1189288138 96 ----------FPRPS-------LVDGAELTRPaqlrGLSpdqvlvlvlvlvlvngkrrhtsafvnlggavgrGSApaDLN 158
Cdd:PRK10641 77 ngglgqlsslFIRGTnsshvlvLIDGVRLNQA----GIS---------------------------------GSA--DLS 117
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1189288138 159 AIPLSAIDHIEVLRDGASARYGSDAIAGVINIILKSADHGGSISSKYGQ--YKKGDGIQRQvsgntgfALGDNGTLNLSG 236
Cdd:PRK10641 118 QIPISLVQRIEYIRGPRSAVYGSDAIGGVVNIITTRDKPGTTLSAGWGSngYQNYDGSTQQ-------QLGDNTRVTLAG 190
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1189288138 237 egsnnDYTNRAGddFRTSSIGSTTYGQQVFRQGepqtHEGKLQY-NAEYSFNDAAEFYSFG-GYSKRrgeTA--AFYRPS 312
Cdd:PRK10641 191 -----DYTYTKG--FDVVAYGNTGTQAQPDRDG----FMSKTLWgGLEHQFNDQWSGFVRGyGYDNR---TDydAYYSPG 256
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1189288138 313 NASNNIAAIYPNGYlplingtleDTslvaGLRGElADDWHYDVSANYGkntyelRTKTINTSlglNTPRSFDNGTLTNDQ 392
Cdd:PRK10641 257 SPLIDTRQLYSQSW---------DA----GLRYN-GGIYSSQLIASYS------HSKDYNYD---PHYGRYDSSATLDDM 313
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1189288138 393 KQlgfdlsreFSAAW-----LPHPvSVSFGAEYLHQgyQIEAGQaesyfQTGSSGlggfraadagsYSRHNFAQYLDVEt 467
Cdd:PRK10641 314 KQ--------YNVQWgntvqVGHG-NISAGVDWQKQ--TTTPGT-----GYVPDG-----------YDQRNTGIYLTGQ- 365
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1189288138 468 nltEKLG---VSAAVRHEDYSDFGSNVSGSLSARYDFTPQVALRGSVSTGFRAPSLAQQnftftssqligntiqeagtFP 544
Cdd:PRK10641 366 ---QQIGdvtLEGAARSDDNSQFGWHGTWQTSAGWEFIDGYRFIASYGTAFKAPNLGQL-------------------YG 423
|
570 580 590 600 610
....*....|....*....|....*....|....*....|....*....|....*..
gi 1189288138 545 AGSNvaqllgaEDLKPEKSRNYSLSL--VLQPLDsLTVTAdvYRIDIQDRISLSSNL 599
Cdd:PRK10641 424 FYGN-------PNLKPEESKQWEGGFegLTGPVN-WRLSG--YRNDIDNLIDYDDHT 470
|
|
| PRK13528 |
PRK13528 |
outer membrane receptor FepA; Provisional |
156-593 |
6.85e-18 |
|
outer membrane receptor FepA; Provisional
Pssm-ID: 237413 [Multi-domain] Cd Length: 727 Bit Score: 88.27 E-value: 6.85e-18
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1189288138 156 DLNAIPLSAIDHIEVLRDGASARYGSDAIAGVINIILK--SADHGGSISSKYGQYKKGD-GIQRQVSGN-TGFALGDNGT 231
Cdd:PRK13528 135 DTNWVPPEMVERIEVIRGPAAARYGSGAAGGVVNIITKrpTNDWHGSLSLYTNQPESSKeGATRRANFSlSGPLAGDALT 214
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1189288138 232 LNLSGegsNNDYTNRAGDDFRTSSIGSTTYG-------------------QQVF-------RQGepQTHEGKLQYNAEYS 285
Cdd:PRK13528 215 MRLYG---NLNKTDADSWDINSSAGTKNAAGregvrnkdingvlswkmtpQQILdfeagysRQG--NIYAGDTQNSNSSA 289
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1189288138 286 FNDaaefysfgGYSKRRGETAAFYRPSnasnniAAIYPNG-----------YLPLINGTLEDTSLVAGLRGELADDWHYD 354
Cdd:PRK13528 290 VTE--------SLAKSGKETNRLYRQN------YGLTHNGiwdwgqsrlgfYYEKTNNTRMNEGLAGGGEGRITADQTFT 355
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1189288138 355 VSanygkntyelRTKTINTSLGLNTPrsFDngtltndqkqLGFDLSrefsaawlphpvsVSFGAEYLHQgyqiEAGQAES 434
Cdd:PRK13528 356 TS----------RLESYRTSGELNVP--LN----------WLFEQT-------------LTVGAEWNRD----ELNDPSS 396
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1189288138 435 YFQTGSSGLGGFRAADAGSYSRHNFAQ----YLDVETNLTEKLGVSAAVRHEDYSDFGSNVSGSLSARYDFTPQVALRGS 510
Cdd:PRK13528 397 TSLTVKDGDIGGISGSAADRSSKNKSEisalYVEDNIEPVPGTNLIPGLRFDYHSEFGSNWSPSLNLSQELGDYFKVKAG 476
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1189288138 511 VSTGFRAPSLAQQN---FTFTSSQLIGNTIQEAGTFpagsnvaqLLGAEDLKPEKSRNYSLSLVLQPlDSLTVTADVYRI 587
Cdd:PRK13528 477 IARAFKAPNLYQSSegyLLYSRGNGCPKDITSGGCY--------LVGNKNLDPEISVNKEIGLEFTV-DDYHASVTYFRN 547
|
....*.
gi 1189288138 588 DIQDRI 593
Cdd:PRK13528 548 DYQNKI 553
|
|
| PRK13484 |
PRK13484 |
IreA family TonB-dependent siderophore receptor; |
22-594 |
1.21e-15 |
|
IreA family TonB-dependent siderophore receptor;
Pssm-ID: 139605 [Multi-domain] Cd Length: 682 Bit Score: 81.21 E-value: 1.21e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1189288138 22 ACISASAHAAQATDEQnsqgasTLsTVIVTGTRAQERTASASLSpidVISGDSLRSSGSSELGTVLaRLIPSINfprpsl 101
Cdd:PRK13484 16 SAVISSGYASSDKKED------TL-VVTASGFTQQLRNAPASVS---VITSEQLQKKPVSDLVDAV-KDVEGIS------ 78
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1189288138 102 VDGAELTRPAQLRGLSPDqvlvlvLVLVLVNGKRRHT-SAFVNLGGAVGRGSAPadlnaiPLSAIDHIEVLRDGASARYG 180
Cdd:PRK13484 79 ITGGNEKPDISIRGLSGD------YTLILVDGRRQSGrESRPNGSGGFEAGFIP------PVEAIERIEVIRGPMSSLYG 146
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1189288138 181 SDAIAGVINIILKSADHggsisskygqyKKGDGiqrqvsgntgfALGDNGTLNlsgegSNNDYTNRAGDDFRTS------ 254
Cdd:PRK13484 147 SDAIGGVINIITKPVNN-----------QTWDG-----------VLGLGGIIQ-----EHGKFGNSTTNDFYLSgplikd 199
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1189288138 255 SIGSTTYGQQVFR------QGEPQTHEGKLQYNAEYSFNDAAEFYSFGGYSKRRGETAAFYRPSNASNNIAAIYPNGYLP 328
Cdd:PRK13484 200 KLGLQLYGGMNYRkedsisQGTPAKDNKNITATLQFTPTESQKFVFEYGKNNQVHTLTPGESLDAWTMRGNLKQPNSKRE 279
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1189288138 329 lingTLEDTSLVAGLRGELADDWHYDVSANYGKNTYELRTKTINTSLGLNTPRSFDNGTLTNDQKQLGFdlsrefsAAWL 408
Cdd:PRK13484 280 ----THNSRSHWVAAWNAQGEILHPEIAVYQEKVIREVKSGKKDKYNHWDLNYESRKPEITNTIIDAKV-------TAFL 348
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1189288138 409 PHPVsVSFGAEYLHQGYQIEagqaesyfqtgsSGLGGfRAADAGSYSRHNFAQYLDVETNLTEKLGVSAAVRHEDYSDFG 488
Cdd:PRK13484 349 PENV-LTIGGQFQHAELRDD------------SATGK-KTTETQSVSIKQKAVFIENEYAATDSLALTGGLRLDNHEIYG 414
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1189288138 489 SNVSGSLSARYDFTPQVALRGSVSTGFRAPSLAQQNFTFTSSQLIGNTIqeagtfpagsnvaqLLGAEDLKPEKSRNYSL 568
Cdd:PRK13484 415 SYWNPRLYAVYNLTDNLTLKGGIAKAFRAPSIREVSPGFGTLTQGGASI--------------MYGNRDLKPETSVTEEI 480
|
570 580
....*....|....*....|....*.
gi 1189288138 569 SLVLQPLDSLTVTADVYRIDIQDRIS 594
Cdd:PRK13484 481 GIIYSNDSGFSASATLFNTDFKNKLT 506
|
|
| PRK13486 |
PRK13486 |
TonB-dependent receptor; |
48-664 |
1.69e-14 |
|
TonB-dependent receptor;
Pssm-ID: 139606 [Multi-domain] Cd Length: 696 Bit Score: 77.37 E-value: 1.69e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1189288138 48 VIVTGTRAQERTASASLSpIDVISGDSLRSSGSSELGTVLaRLIPSINFPRPS-LVDGAELTrpaqLRGLSpdqvlvLVL 126
Cdd:PRK13486 28 MIVSASGYEKKLTNAAAS-VSVISQEELQSSQYHDLAEAL-RSVEGVDVESGTgKTGGLEIS----IRGMP------ASY 95
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1189288138 127 VLVLVNGKRRHTSAFVNLGG--AVGRGSAPadlnaiPLSAIDHIEVLRDGASARYGSDAIAGVINIILK-SADHGGSISS 203
Cdd:PRK13486 96 TLILIDGVRQGGSSDVTPNGfsAMNTGFMP------PLAAIERIEVIRGPMSTLYGSDAMGGVVNIITRkNADKWLSSVN 169
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1189288138 204 KygqykkgdGIQRQVSGNtgfaLGDNGTLNLSGEGSNNDytnragDDFRTSSIGSTTYGQQVFRQGEPQTHEGKLQYNAE 283
Cdd:PRK13486 170 A--------GLNLQESNK----WGNSSQFNFWSSGPLVD------DSVSLQVRGSTQQRQGSSVTSLSDTAATRIPYPTE 231
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1189288138 284 ysfndaAEFYSFGG-YSKRRGETAAFYRPSNASNNIaaiYPN--GYLPLINGTLEDTslvagLRGEladdwHYDVSANYG 360
Cdd:PRK13486 232 ------SQNYNLGArLDWKASEQDVLWFDMDTTRQR---YDNrdGQLGSLTGGYDRT-----LRYE-----RNKISAGYD 292
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1189288138 361 KN-TYELRTKTINTSLGLNTPRSFDNGTLTNDQKQLGFDlSREFSAAWLphpVSVSFGAEYLHQGYQIEAGqaeSYFQTG 439
Cdd:PRK13486 293 HTfTFGTWKSYLNWNETENKGRELVRSVLKRDKWGLAGQ-PRELKESNL---ILNSLLLTPLGESHLVTVG---GEFQSS 365
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1189288138 440 SSGLGGFRAADAGSYSRHNFAQYLDVETNLTEKLGVSAAVRHEDYSDFGSNVSGSLSARYDFTPQVALRGSVSTGFRAPS 519
Cdd:PRK13486 366 SMKDGVVLASTGETFRQKSWSVFAEDEWHLTDALALTAGSRYEHHEQFGGHFSPRAYLVWDVADAWTLKGGVTTGYKAPR 445
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1189288138 520 LAQqnftftssqligntIQEAGTFPAGSNVAQLLGAEDLKPEKSRNYSLSLVLQPLDSLTVTADVYRIDIQDRISLSSnl 599
Cdd:PRK13486 446 MGQ--------------LHKGISGVSGQGKTNLLGNPDLKPEESVSYEAGVYYDNPAGLNANVTGFMTDFSNKIVSYS-- 509
|
570 580 590 600 610 620
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1189288138 600 VLNNTainylrsngvgdinytsaRYFTNATDTSTDGVDLVANYRYQFDngvrwNSTVGYNYNHTK 664
Cdd:PRK13486 510 INDNT------------------NSYVNSGKARLHGVEFAGTLPLWSE-----DVTLSLNYTWTR 551
|
|
| Plug |
pfam07715 |
TonB-dependent Receptor Plug Domain; The Plug domain has been shown to be an independently ... |
59-187 |
1.21e-10 |
|
TonB-dependent Receptor Plug Domain; The Plug domain has been shown to be an independently folding subunit of the TonB-dependent receptors. It acts as the channel gate, blocking the pore until the channel is bound by ligand. At this point it under goes conformational changes opens the channel.
Pssm-ID: 462243 [Multi-domain] Cd Length: 107 Bit Score: 59.20 E-value: 1.21e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1189288138 59 TASASLSPIDVISGDSLRSSGSSELGTVLARlIPSINFPRPSLVDGAELTrpaqLRGLSPDQVLVLVlvlvlvNGKRRHT 138
Cdd:pfam07715 1 DLRDTPGSVSVVTAEDIEDQGATNLADALRG-VPGVSVSSGGGGGGSSIS----IRGFGSNRVLVLV------DGVPLNS 69
|
90 100 110 120
....*....|....*....|....*....|....*....|....*....
gi 1189288138 139 SafvnlggavgrGSAPADLNAIPLSAIDHIEVLRDGASARYGSDAIAGV 187
Cdd:pfam07715 70 G-----------GGGSVDLNSIDPEDIERVEVLKGPASALYGSGAIGGV 107
|
|
| |
