|
Name |
Accession |
Description |
Interval |
E-value |
| FhuE |
COG4773 |
Outer membrane receptor for ferric coprogen and ferric-rhodotorulic acid [Inorganic ion ... |
30-702 |
0e+00 |
|
Outer membrane receptor for ferric coprogen and ferric-rhodotorulic acid [Inorganic ion transport and metabolism];
Pssm-ID: 443805 [Multi-domain] Cd Length: 692 Bit Score: 687.40 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1196389603 30 AQETTKNETIVVTSQMQ----------SGATKIATPDIETPQSVSIITREQFEEQGAISVRQAVSYTPGVYSNQiGASNR 99
Cdd:COG4773 26 AAEATTLPEVTVTGTAEgtggytakssSTATKLDTPLRETPQSVSVVTRQLIEDQGATTLDDALRNVPGVTVSS-YDGGG 104
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1196389603 100 FDYIVLRGFSdgsLDNVYLDGLKMmgdtNSHSSLVVDPWFLENIEVVRGPASVLYGRSSPGGIVALTSRKPSFDPGGEIK 179
Cdd:COG4773 105 RDSFSIRGFS---IDNYLRDGLPL----GGFGGGQPDTANLERVEVLKGPAGLLYGAGSPGGLVNLVTKRPTAEPQGEVS 177
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1196389603 180 LFAGNNNQRGAAFDVTGALDDNDRVAARLSGMTRYADSQFDTLKEQRYAIMPSLTWRITDQTRLDLMAYLHRDPEGGSHS 259
Cdd:COG4773 178 LSAGSWDTYRATADVGGPLNEDGTLRYRLNAAYEDGDSFRDGVDNRRTLIAPSLDWDLTDDTTLTLGAEYQDDDSTGDRG 257
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1196389603 260 GLPYEGTVVphygkKIANTFFEGEdDYDKYDRRENMVGYNFEHLFDNGWSVRQKLRYLHTKVELNQVYAAGWLNET--EL 337
Cdd:COG4773 258 FLPLDGTLL-----DLPRSTNLGE-PWDYYDTETTTLFAELEHRFNDDWSLRANARYSDSDRDGRSAYAYGAPDAAtgTL 331
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1196389603 338 NRGYSGSDEKMNAITLDNQLDGSVDTWAVNHRLLIGIDYQDRSNDTtgYYGAFPAIDAFNPVYGAKPDYITMYSREKHKL 417
Cdd:COG4773 332 TRYASARDGDSRSDSLDANLNGKFETGGLEHTLLVGADYSRYDSDS--DSATAGTINIYNPVYGNLPEPDFDASDTDTTT 409
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1196389603 418 RQTGYYLQDQMSW-ERWRLTLGGRYDQVSVSNIDKLNQTRSDLDKNNFSTRAALLYLFDNGFAPYISYSTAFTPTSFADE 496
Cdd:COG4773 410 RQTGLYAQDQISLtDRLSLLLGGRYDWYETDSTNRLGGSTTSYDDSAFTPRAGLVYDLTPGLSLYASYSESFEPQSGADN 489
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1196389603 497 NGNVLDPMKGKQWEAGLKYEPEGMNSQFSASVFRINQTNIATKE-EPTDPYRSIGEIESKGVELEAISQLTDSFRLQAAY 575
Cdd:COG4773 490 NGNPLDPETGKQYEAGVKGELFDGRLNATLAVFDITQKNVATTDpDNPNFYVQVGEVRSRGVELELSGELTPGLNLIAGY 569
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1196389603 576 TYTDIRYKKSSPEEQGKRAVYAPRNQASAWLSYDVKSGPLDGLTLGSGVRYVNGITSDRLNTHTLPSYTLVDMAIGYDLS 655
Cdd:COG4773 570 TYTDAKITKDADALEGKRLTNVPRHTASLWTTYRFPSGALKGLGLGGGVRYVGERYGDAANTFTLPSYTLVDAGARYDLG 649
|
650 660 670 680
....*....|....*....|....*....|....*....|....*..
gi 1196389603 656 kvgiKGLSAQLNVNNLTDKSYVAACNSLSYCYFGAERSIVGSVSWKF 702
Cdd:COG4773 650 ----KNWTLQLNVNNLFDKKYYASSGSRGYVYYGAPRNVRLSLSYKF 692
|
|
| PRK10044 |
PRK10044 |
ferrichrome outer membrane transporter; Provisional |
12-702 |
0e+00 |
|
ferrichrome outer membrane transporter; Provisional
Pssm-ID: 236643 [Multi-domain] Cd Length: 727 Bit Score: 656.83 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1196389603 12 RLALLVGWVTGGVAFPLLAQETTKNETIVVTS-----------------QMQSGATKIATPDIETPQSVSIITREQFEEQ 74
Cdd:PRK10044 15 KIAVVVATAVSGMSVYAQAAVEPKEETITVTAapapqesawgpaatiaaKRSATGTKTDTPIEKTPQSISVVTAEEMALH 94
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1196389603 75 GAISVRQAVSYTPGVYSNQIGASNRFDYIVLRGF-SDGSLDNVYLDGLKMMGDtnSHSSLVVDPWFLENIEVVRGPASVL 153
Cdd:PRK10044 95 QPKSVKEALSYTPGVSVGTRGASNTYDHLIIRGFaASGQSQNNYLDGLKLQGN--FYNDAVIDPYMLERAELMRGPVSVL 172
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1196389603 154 YGRSSPGGIVALTSRKPSFDPGGEIKLFAGNNNQRGAAFDVTGALDDNDRVAARLSGMTRYADSQFDTLKEQRYAIMPSL 233
Cdd:PRK10044 173 YGKSNPGGLLNMVSKRPTTEPLKEVQFKMGTDNLFQTGFDFSDALDDDGVYSYRLTGLARSANAQQKGSEEQRYAIAPSF 252
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1196389603 234 TWRITDQTRLDLMAYLHRDPEGGSHSGLPYEGTVVPHY-GKKIANTFFEGEDDyDKYDRRENMVGYNFEHLFDNGWSVRQ 312
Cdd:PRK10044 253 TWRPDDKTNFTFLSYFQNEPETGYYGWLPKEGTVEPLPnGKRLPTDFNEGAKN-NTYSRNEKMVGYSFDHEFNDTFTVRQ 331
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1196389603 313 KLRYLHTKVELNQVYAAGWLNET--ELNRGYSGSDEKMNAITLDNQLDGSVDTWAVNHRLLIGIDYQDRSNDTTGYYGAF 390
Cdd:PRK10044 332 NLRYAENKTSQRSVYGYGVCSDKghYLNRGYVVDDEKLQNFSVDTQLQSKFATGDVDHTLLTGVDFMRMRNDINAWFGYA 411
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1196389603 391 PAIDAFNpVYGakPDYITMYSREK-------HKLRQTGYYLQDQMSWERWRLTLGGRYDQVSVSNIDKLNQTRSDLDKNN 463
Cdd:PRK10044 412 DSVPLLN-LYG--PVNTDFDFNANsgpyqilNKQKQTGLYVQDQAEWDKWLVTLGGRYDWADQSSLNRVNGTTDKRDDKQ 488
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1196389603 464 FSTRAALLYLFDNGFAPYISYSTAFTPTSFADENGNVLDPMKGKQWEAGLKYEPEGMNSQFSASVFRINQTNIATKeEPT 543
Cdd:PRK10044 489 FTWRGGVNYLFDNGITPYFSYSESFEPSSGTGKDGNIFAPSKGKQYEAGVKYVPKDRPIVVTGAVYQLTKTNNLTA-DPE 567
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1196389603 544 DPYRSI--GEIESKGVELEAISQLTDSFRLQAAYTYTDIRYKKSSpEEQGKRAVYAPRNQASAWLSYDVKSGPLDGLTLG 621
Cdd:PRK10044 568 NSFFSVqgGEIRARGVELEAKAALSANVNVTGSYTYTDAEYTTDT-TYKGNTPAQVPKHMASLWADYTFFDGPLSGLTLG 646
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1196389603 622 SGVRYVNGITSDRLNTHTLPSYTLVDMAIGYDLSKVGIKGLSAQLNVNNLTDKSYVAACNSLSYCYFGAERSIVGSVSWK 701
Cdd:PRK10044 647 TGGRYTGSSYGDPANSFKVGSYTVVDALVKYDLARFGMAGSSVALNVNNLFDREYVASCFNTYGCFWGAERQVVATATFR 726
|
.
gi 1196389603 702 F 702
Cdd:PRK10044 727 F 727
|
|
| TonB-siderophor |
TIGR01783 |
TonB-dependent siderophore receptor; This subfamily model encompasses a wide variety of ... |
58-702 |
1.10e-135 |
|
TonB-dependent siderophore receptor; This subfamily model encompasses a wide variety of TonB-dependent outer membrane siderophore receptors. It has no overlap with TonB receptors known to transport other substances, but is likely incomplete due to lack of characterizations. It is likely that genuine siderophore receptors will be identified which score below the noise cutoff to this model at which point the model should be updated. [Transport and binding proteins, Cations and iron carrying compounds, Transport and binding proteins, Porins]
Pssm-ID: 273805 [Multi-domain] Cd Length: 651 Bit Score: 413.73 E-value: 1.10e-135
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1196389603 58 ETPQSVSIITREQFEEQGAISVRQAVSYTPGVYSNQIGASNRFDYIVLRGFS-DGSLDNVYLDGLKMMGDTNShssLVVD 136
Cdd:TIGR01783 1 DIPQSVSVITRQELEDQQAGSLSEALQRVPGVVVGGSGGTTQFGNITIRGFGlEVDIDNVYLDGVPLLSRGNL---AIVD 77
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1196389603 137 PWFLENIEVVRGPASVLYGRSSPGGIVALTSRKPSFDPGGEIKLFAGNNNQRGAAFDVTGALDDNDRVAARLSGMTRYAD 216
Cdd:TIGR01783 78 PAMVERVEVLRGPASLLYGGSAPGGVINIVTKRPQDEPKGSVTFGAGTRSGYRTAFDLGGPLGADGTFRGRLNGARQDGD 157
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1196389603 217 SQFDTLKEQRYAIMPSLTWRITDQTRLDLMAYLHRDPEGGSHSGLPYEGTVvphYGKKIANTFFEGEDDYDKYDRREN-M 295
Cdd:TIGR01783 158 SFYDGAGEETRLGATATDWQLDDRTLLRLGAYYQKERDRGGYGGLPASGGT---SGRDLSSDRYLGTSSNRNYDDREYlS 234
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1196389603 296 VGYNFEHLFDNGWSVRQKLRYLHTKVELNQVYAAGWLN-ETELNRGYSGSDEKMNAITLDNQLDGSVDTWAVNHRLLIGI 374
Cdd:TIGR01783 235 YGLSLEYQFNDVWTGKQNLRYSYFDTDSNQVQASGYSSdGGLFGRSLTVVNVKQDRVQIDAGLDGEFETGPIEHDLLLGV 314
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1196389603 375 DYQDRSNDTTGYYGAFPaIDAFNPVYGAKPDY-ITMYSREKHKLRQT----GYYLQDQMSWERWRLTLGGRYDQVSVSNI 449
Cdd:TIGR01783 315 SYGQRTTNRFNNTGYPS-DNIYSLTATSSARTdIGDSPKDRALSSTTkalnGVALQRILLADKWTLTLGGRYDSVDVKSN 393
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1196389603 450 DKLNQTRSDLDKNNFSTRAALLYLFDNGFAPYISYSTAFTP----TSFADENGNVLDPMKGKQWEAGLKYEPEGMNSQfS 525
Cdd:TIGR01783 394 NGVAGSTGKRDDSQFTPSLGVAYKPTDDWSLYASYAESFKPggyyPKGAGNSGDILEPEKGKNYELGVRYDLGDSLLA-T 472
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1196389603 526 ASVFRINQTNIATKEEPTDPYRS-IGEIESKGVELEAISQLTDSFRLQAAYTYTDIRY-KKSSPEEQGKRAVYAPRNQAS 603
Cdd:TIGR01783 473 AALFRITKDNQLVQDPVNGTFSVnAGKTRNRGVELEARGYLTPGLSLSAGYTYTDAEFtEDTNGDTQGNTVPFVPKHTAS 552
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1196389603 604 AWLSYDVKSGPLdGLTLGSGVRYVNGITSDRLNTHTLPSYTLVDMAIGYDLSKVgiKGLSAQLNVNNLTDKSYVAACNSL 683
Cdd:TIGR01783 553 LWASYAPPVGDN-GLTLGGGVQYTGKAYVDGGNTGKVPSYTVVDLSVRYDLTKK--KNLTLALNVNNLFDRDYYTSGYRW 629
|
650 660
....*....|....*....|..
gi 1196389603 684 S---YCYFGAERSIVGSVSWKF 702
Cdd:TIGR01783 630 GpsaYIYPGAPRTVGLSVSYDF 651
|
|
| ligand_gated_channel |
cd01347 |
TonB dependent/Ligand-Gated channels are created by a monomeric 22 strand (22,24) ... |
62-702 |
2.31e-132 |
|
TonB dependent/Ligand-Gated channels are created by a monomeric 22 strand (22,24) anti-parallel beta-barrel. Ligands apparently bind to the large extracellular loops. The N-terminal 150-200 residues form a plug from the periplasmic end of barrel. Energy (proton-motive force) and TonB-dependent conformational alteration of channel (parts of plug, and loops 7 and 8) allow passage of ligand. FepA residues 12-18 form the TonB box, which mediates the interaction with the TonB-containing inner membrane complex. TonB preferentially interacts with ligand-bound receptors. Transport thru the channel may resemble passage thru an air lock. In this model, ligand binding leads to closure of the extracellular end of pore, then a TonB-mediated signal facillitates opening of the interior side of pore, deforming the N-terminal plug and allowing passage of the ligand to the periplasm. Such a mechanism would prevent the free diffusion of small molecules thru the pore.
Pssm-ID: 238657 [Multi-domain] Cd Length: 635 Bit Score: 404.53 E-value: 2.31e-132
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1196389603 62 SVSIITREQFEEQGAISVRQAVSYTPGVYSNQIGASNRfDYIVLRGFsDGSLDNVYLDGLKMMGDTNSHS--SLVVDPWF 139
Cdd:cd01347 1 SVSVITAEDIEKQPATSLADLLRRIPGVSVTRGGGGGG-STISIRGF-GPDRTLVLVDGLPLASSNYGRGvdLNTIPPEL 78
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1196389603 140 LENIEVVRGPASVLYGRSSPGGIVALTSRKPSFDPGGEIKLFAGN---NNQRGAAFDVTGALDDNDRVAARLSGMTRYAD 216
Cdd:cd01347 79 IERVEVLKGPSSALYGSGAIGGVVNIITKRPTDEFGGSVTAGYGSdnsGSSGGGGFDVSGALADDGAFGARLYGAYRDGD 158
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1196389603 217 SQF------DTLKEQRYAIMPSLTWRITDQTRLDLMAYLHRDPEGGSHSGLPYEGTVVPHygKKIANTFFEGEDDYDKYD 290
Cdd:cd01347 159 GTIdgdgqaDDSDEERYNVAGKLDWRPDDDTRLTLDAGYQDQDADGPGGTLPANGTGSSL--GGGPSSNTNGDRDWDYRD 236
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1196389603 291 RRENMVGYNFEHLF-DNGWSVRQKLRYLHTKVELNQVYAAGWLN--ETELNRGYSGSDEKMNAITLDNQLDGSVDTWAVN 367
Cdd:cd01347 237 RYRKRASLGLEHDLnDTGWTLRANLSYSYTDNDGDPLILNGGNNaaGGDLGRSGYSSERDTTQLGFDAGLNAPFGTGPVA 316
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1196389603 368 HRLLIGIDYQDRSNDTtgyygafpaidafnpvygakpdyitmysrekhklRQTGYYLQDQMSW-ERWRLTLGGRYDQVSV 446
Cdd:cd01347 317 HTLTLGVEYRREELDE----------------------------------KQTALYAQDTIELtDDLTLTLGLRYDHYDQ 362
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1196389603 447 SNIDKLNQ-TRSDLDKNNFSTRAALLYLFDNGFAPYISYSTAFTPTSFADENGNV------------LDPMKGKQWEAGL 513
Cdd:cd01347 363 DSKDTIAGgTTAKKSYSHWSPSLGLVYKLTDGLSLYASYSQGFRAPSLGELYGGGshggtaavgnpnLKPEKSKQYELGL 442
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1196389603 514 KYEPEGmNSQFSASVFRINQTN-IATKEEPTDP-----YRSIGEIESKGVELEAISQLTDSFRLQAAYTYTDIRYKKSSP 587
Cdd:cd01347 443 KYDPGD-GLTLSAALFRIDIKNeIVSTPTNTGLglvtvYVNGGKARIRGVELEASYDLTDGLGLTGSYTYTDTEVKRTDG 521
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1196389603 588 EEQGKRAVYAPRNQASAWLSYDVksgPLDGLTLGSGVRYV---NGITSDRLNTHTLPSYTLVDMAIGYDLSkvgiKGLSA 664
Cdd:cd01347 522 ATTGNRLPGIPKHTANLGLDYEL---PDEGLTAGGGVRYRgkqYADTANGNNTVKVPGYTLVDLSASYQFT----KNLTL 594
|
650 660 670 680
....*....|....*....|....*....|....*....|.
gi 1196389603 665 QLNVNNLTDKSYVAACNSL---SYCYFGAERSIVGSVSWKF 702
Cdd:cd01347 595 RLGVNNLFDKDYYTSLSVRgsgLYGYYGPGRTYYLSVSYKF 635
|
|
| TonB_dep_Rec |
pfam00593 |
TonB dependent receptor; This model now only covers the conserved part of the barrel structure. |
271-701 |
1.89e-56 |
|
TonB dependent receptor; This model now only covers the conserved part of the barrel structure.
Pssm-ID: 395474 [Multi-domain] Cd Length: 475 Bit Score: 199.61 E-value: 1.89e-56
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1196389603 271 YGKKIANTFFEGEDDYDKYDRRENMVGYNFEHLFDNGWSVRQKLRYLHTKVELNQVYAAGWLNEtelNRGYSGSDEKMNA 350
Cdd:pfam00593 40 DGGYLGDRPLYYGRDYSDTDRKRLSLGYDYDLGDGLSWLSTLRLGLRYSSLDGDYTSNSSGLSG---AGDYLSDDRLYGL 116
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1196389603 351 ITLDNQLDGSVDtwaVNHRLLIGIDYQDRSNDTTGYygAFPAIDAFNPVYGAKpdyitmYSREKHKLRQTGYYLQDQMSW 430
Cdd:pfam00593 117 YGLDGDLELSLD---LSHDLLLGVELRTAGLDYRRL--DDDAYDPYDPANPSS------SSYSDTTTDSYGLYLQDNIKL 185
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1196389603 431 -ERWRLTLGGRYDQVSVSNIDKLNQ-TRSDLDKNNFSTRAALLYLFDNGFAPYISYSTAFTPTSFAD------------- 495
Cdd:pfam00593 186 tDRLTLTLGLRYDHYSTDGDDGNGGgDNFSRSYSAFSPRLGLVYKPTDNLSLYASYSRGFRAPSLGElygsgsgggggav 265
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1196389603 496 ENGNV-LDPMKGKQWEAGLKYEPEgmNSQFSASVFRINQTNIAT-------KEEPTDPYRSIGEIESKGVELEAISQLTD 567
Cdd:pfam00593 266 AGGNPdLKPETSDNYELGLKYDDG--RLSLSLALFYIDIKNLITsdpdgpgLGGTVYTYTNVGKARIRGVELELSGRLWG 343
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1196389603 568 SFRLQAAYTYTDIRYKKSsPEEQGKRAVYAPRNQASAWLSYDvksGPLDGLTLGSGVRYV---NGITSDRLNTHTLPSYT 644
Cdd:pfam00593 344 LGLSGGGYTYTDADDDAD-ADDTGNPLPNVPRHTANLGLTYD---FPLGGWGARLGARYVgsgERRYGDAANTFKTPGYT 419
|
410 420 430 440 450 460
....*....|....*....|....*....|....*....|....*....|....*....|
gi 1196389603 645 LVDMAIGYDLSkvgiKGLSAQLNVNNLTDK---SYVAACNSLSYCYFGAERSIVGSVSWK 701
Cdd:pfam00593 420 LVDLSAGYRLN----KNLTLRLGVNNLFDKyykRYYSSGGGNLGGYPGPGRTFYLGLSYK 475
|
|
| |
|
Name |
Accession |
Description |
Interval |
E-value |
| FhuE |
COG4773 |
Outer membrane receptor for ferric coprogen and ferric-rhodotorulic acid [Inorganic ion ... |
30-702 |
0e+00 |
|
Outer membrane receptor for ferric coprogen and ferric-rhodotorulic acid [Inorganic ion transport and metabolism];
Pssm-ID: 443805 [Multi-domain] Cd Length: 692 Bit Score: 687.40 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1196389603 30 AQETTKNETIVVTSQMQ----------SGATKIATPDIETPQSVSIITREQFEEQGAISVRQAVSYTPGVYSNQiGASNR 99
Cdd:COG4773 26 AAEATTLPEVTVTGTAEgtggytakssSTATKLDTPLRETPQSVSVVTRQLIEDQGATTLDDALRNVPGVTVSS-YDGGG 104
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1196389603 100 FDYIVLRGFSdgsLDNVYLDGLKMmgdtNSHSSLVVDPWFLENIEVVRGPASVLYGRSSPGGIVALTSRKPSFDPGGEIK 179
Cdd:COG4773 105 RDSFSIRGFS---IDNYLRDGLPL----GGFGGGQPDTANLERVEVLKGPAGLLYGAGSPGGLVNLVTKRPTAEPQGEVS 177
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1196389603 180 LFAGNNNQRGAAFDVTGALDDNDRVAARLSGMTRYADSQFDTLKEQRYAIMPSLTWRITDQTRLDLMAYLHRDPEGGSHS 259
Cdd:COG4773 178 LSAGSWDTYRATADVGGPLNEDGTLRYRLNAAYEDGDSFRDGVDNRRTLIAPSLDWDLTDDTTLTLGAEYQDDDSTGDRG 257
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1196389603 260 GLPYEGTVVphygkKIANTFFEGEdDYDKYDRRENMVGYNFEHLFDNGWSVRQKLRYLHTKVELNQVYAAGWLNET--EL 337
Cdd:COG4773 258 FLPLDGTLL-----DLPRSTNLGE-PWDYYDTETTTLFAELEHRFNDDWSLRANARYSDSDRDGRSAYAYGAPDAAtgTL 331
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1196389603 338 NRGYSGSDEKMNAITLDNQLDGSVDTWAVNHRLLIGIDYQDRSNDTtgYYGAFPAIDAFNPVYGAKPDYITMYSREKHKL 417
Cdd:COG4773 332 TRYASARDGDSRSDSLDANLNGKFETGGLEHTLLVGADYSRYDSDS--DSATAGTINIYNPVYGNLPEPDFDASDTDTTT 409
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1196389603 418 RQTGYYLQDQMSW-ERWRLTLGGRYDQVSVSNIDKLNQTRSDLDKNNFSTRAALLYLFDNGFAPYISYSTAFTPTSFADE 496
Cdd:COG4773 410 RQTGLYAQDQISLtDRLSLLLGGRYDWYETDSTNRLGGSTTSYDDSAFTPRAGLVYDLTPGLSLYASYSESFEPQSGADN 489
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1196389603 497 NGNVLDPMKGKQWEAGLKYEPEGMNSQFSASVFRINQTNIATKE-EPTDPYRSIGEIESKGVELEAISQLTDSFRLQAAY 575
Cdd:COG4773 490 NGNPLDPETGKQYEAGVKGELFDGRLNATLAVFDITQKNVATTDpDNPNFYVQVGEVRSRGVELELSGELTPGLNLIAGY 569
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1196389603 576 TYTDIRYKKSSPEEQGKRAVYAPRNQASAWLSYDVKSGPLDGLTLGSGVRYVNGITSDRLNTHTLPSYTLVDMAIGYDLS 655
Cdd:COG4773 570 TYTDAKITKDADALEGKRLTNVPRHTASLWTTYRFPSGALKGLGLGGGVRYVGERYGDAANTFTLPSYTLVDAGARYDLG 649
|
650 660 670 680
....*....|....*....|....*....|....*....|....*..
gi 1196389603 656 kvgiKGLSAQLNVNNLTDKSYVAACNSLSYCYFGAERSIVGSVSWKF 702
Cdd:COG4773 650 ----KNWTLQLNVNNLFDKKYYASSGSRGYVYYGAPRNVRLSLSYKF 692
|
|
| PRK10044 |
PRK10044 |
ferrichrome outer membrane transporter; Provisional |
12-702 |
0e+00 |
|
ferrichrome outer membrane transporter; Provisional
Pssm-ID: 236643 [Multi-domain] Cd Length: 727 Bit Score: 656.83 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1196389603 12 RLALLVGWVTGGVAFPLLAQETTKNETIVVTS-----------------QMQSGATKIATPDIETPQSVSIITREQFEEQ 74
Cdd:PRK10044 15 KIAVVVATAVSGMSVYAQAAVEPKEETITVTAapapqesawgpaatiaaKRSATGTKTDTPIEKTPQSISVVTAEEMALH 94
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1196389603 75 GAISVRQAVSYTPGVYSNQIGASNRFDYIVLRGF-SDGSLDNVYLDGLKMMGDtnSHSSLVVDPWFLENIEVVRGPASVL 153
Cdd:PRK10044 95 QPKSVKEALSYTPGVSVGTRGASNTYDHLIIRGFaASGQSQNNYLDGLKLQGN--FYNDAVIDPYMLERAELMRGPVSVL 172
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1196389603 154 YGRSSPGGIVALTSRKPSFDPGGEIKLFAGNNNQRGAAFDVTGALDDNDRVAARLSGMTRYADSQFDTLKEQRYAIMPSL 233
Cdd:PRK10044 173 YGKSNPGGLLNMVSKRPTTEPLKEVQFKMGTDNLFQTGFDFSDALDDDGVYSYRLTGLARSANAQQKGSEEQRYAIAPSF 252
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1196389603 234 TWRITDQTRLDLMAYLHRDPEGGSHSGLPYEGTVVPHY-GKKIANTFFEGEDDyDKYDRRENMVGYNFEHLFDNGWSVRQ 312
Cdd:PRK10044 253 TWRPDDKTNFTFLSYFQNEPETGYYGWLPKEGTVEPLPnGKRLPTDFNEGAKN-NTYSRNEKMVGYSFDHEFNDTFTVRQ 331
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1196389603 313 KLRYLHTKVELNQVYAAGWLNET--ELNRGYSGSDEKMNAITLDNQLDGSVDTWAVNHRLLIGIDYQDRSNDTTGYYGAF 390
Cdd:PRK10044 332 NLRYAENKTSQRSVYGYGVCSDKghYLNRGYVVDDEKLQNFSVDTQLQSKFATGDVDHTLLTGVDFMRMRNDINAWFGYA 411
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1196389603 391 PAIDAFNpVYGakPDYITMYSREK-------HKLRQTGYYLQDQMSWERWRLTLGGRYDQVSVSNIDKLNQTRSDLDKNN 463
Cdd:PRK10044 412 DSVPLLN-LYG--PVNTDFDFNANsgpyqilNKQKQTGLYVQDQAEWDKWLVTLGGRYDWADQSSLNRVNGTTDKRDDKQ 488
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1196389603 464 FSTRAALLYLFDNGFAPYISYSTAFTPTSFADENGNVLDPMKGKQWEAGLKYEPEGMNSQFSASVFRINQTNIATKeEPT 543
Cdd:PRK10044 489 FTWRGGVNYLFDNGITPYFSYSESFEPSSGTGKDGNIFAPSKGKQYEAGVKYVPKDRPIVVTGAVYQLTKTNNLTA-DPE 567
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1196389603 544 DPYRSI--GEIESKGVELEAISQLTDSFRLQAAYTYTDIRYKKSSpEEQGKRAVYAPRNQASAWLSYDVKSGPLDGLTLG 621
Cdd:PRK10044 568 NSFFSVqgGEIRARGVELEAKAALSANVNVTGSYTYTDAEYTTDT-TYKGNTPAQVPKHMASLWADYTFFDGPLSGLTLG 646
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1196389603 622 SGVRYVNGITSDRLNTHTLPSYTLVDMAIGYDLSKVGIKGLSAQLNVNNLTDKSYVAACNSLSYCYFGAERSIVGSVSWK 701
Cdd:PRK10044 647 TGGRYTGSSYGDPANSFKVGSYTVVDALVKYDLARFGMAGSSVALNVNNLFDREYVASCFNTYGCFWGAERQVVATATFR 726
|
.
gi 1196389603 702 F 702
Cdd:PRK10044 727 F 727
|
|
| Fiu |
COG4774 |
Outer membrane receptor for monomeric catechols [Inorganic ion transport and metabolism]; |
51-702 |
0e+00 |
|
Outer membrane receptor for monomeric catechols [Inorganic ion transport and metabolism];
Pssm-ID: 443806 [Multi-domain] Cd Length: 639 Bit Score: 597.24 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1196389603 51 KIATPDIETPQSVSIITREQFEEQGAISVRQAVSYTPGVYSNQiGASNRFDYIVLRGFSDGSldNVYLDGLKMMGDTNsh 130
Cdd:COG4774 1 KTDTPLLDTPQSVTVVTRELIEDQGATSLADALRNVPGVTFGA-GEGGNGDSFSIRGFSASG--DIYVDGLRDPGQYR-- 75
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1196389603 131 sslvVDPWFLENIEVVRGPASVLYGRSSPGGIVALTSRKPSFDPGGEIKLFAGNNNQRGAAFDVTGALDDNdrVAARLSG 210
Cdd:COG4774 76 ----RDTFNLERVEVLKGPASVLYGRGSPGGVINLVTKRPTDEPFTEVTLTYGSDGQRRATLDVNGPLGDD--LAYRLNG 149
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1196389603 211 MTRYADSQFDTLKEQRYAIMPSLTWRITDQTRLDLMAYLHRDpEGGSHSGLPYEGTVVPHYGKkiANTFFeGEDDyDKYD 290
Cdd:COG4774 150 MYRDSDSYRDGVDNDRWGIAPSLTWRLGDRTRLTLDYEYQDD-DRTPDYGVPAVANGRPVDVD--RSTFY-GQPD-DYSD 224
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1196389603 291 RRENMVGYNFEHLFDNGWSVRQKLRYLHTKVELNQVYAAGWLNETELNRGYSGSDEKMNAITLDNQLDGSVDTWAVNHRL 370
Cdd:COG4774 225 SETDSATLRLEHDFNDNWTLRNALRYSDYDRDYRNTYPTGGNATGTVTRSAYRRDQDNDTLSNQTDLTGKFDTGGVKHTL 304
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1196389603 371 LIGIDYQDRSNDTTGYY--GAFPAIDAFNPVYGAKPDYITMYSREKH-KLRQTGYYLQDQMSW-ERWRLTLGGRYDQVSV 446
Cdd:COG4774 305 LAGVEYSREDSDNARYSggGTAPTVNLYNPVYGAPVTGPTLGGADNDsRTDTTGLYLQDTISLtDRWSLLAGLRYDRFDT 384
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1196389603 447 SNIDKL-NQTRSDLDKNNFSTRAALLYLFDNGFAPYISYSTAFTPTS---FADENGNVLDPMKGKQWEAGLKYEPEGMNS 522
Cdd:COG4774 385 DYTDRTtGATTSSYDDSAFSPRAGLVYKPTPNLSLYASYSTSFNPGGgapSLSNAGQALDPEKSRQYEVGVKWDLLDGRL 464
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1196389603 523 QFSASVFRINQTNIATkEEPTDP--YRSIGEIESKGVELEAISQLTDSFRLQAAYTYTDIRYKKS-SPEEQGKRAVYAPR 599
Cdd:COG4774 465 SLTAALFRIEKTNVRT-TDPANPgvYVQTGEQRSRGVELEATGELTPGWSVLAGYTYLDAEITKSaNAANVGNRLPNVPR 543
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1196389603 600 NQASAWLSYDVksgPLDGLTLGSGVRYVNGITSDRLNTHTLPSYTLVDMAIGYDLSkvgiKGLSAQLNVNNLTDKSYVAA 679
Cdd:COG4774 544 HSASLWTTYDL---PLPGLTLGGGVRYVGSRYADAANTVKLPSYTRFDAGASYRLN----KNLTLRLNVNNLTDKRYYAS 616
|
650 660
....*....|....*....|...
gi 1196389603 680 CNSLSYCYFGAERSIVGSVSWKF 702
Cdd:COG4774 617 AYGSGYVTPGAPRTVLLSASYRF 639
|
|
| PRK14050 |
PRK14050 |
TonB-dependent siderophore receptor; |
10-702 |
8.28e-153 |
|
TonB-dependent siderophore receptor;
Pssm-ID: 237595 [Multi-domain] Cd Length: 728 Bit Score: 460.42 E-value: 8.28e-153
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1196389603 10 KTRLALLVGWVTGGVAFPLLAQE--TTKNETIVVTSQMQSGAT-----------------KIATPDIETPQSVSIITREQ 70
Cdd:PRK14050 11 MMLLAAGVALAALVLSGLVAAQEgnTTQLETIVVEGGNAASATatgpvdgyvakatatgsKTDTPITEIPQSVSVVGRQE 90
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1196389603 71 FEEQGAIS-VRQAVSYTPGVYSNQIGASNRFDYIVLRGFsDGSLDNVYLDGLKMMgdTNSHSSLVVDPWFLENIEVVRGP 149
Cdd:PRK14050 91 MDDRGVTNkVDEALRYTPGVLSQPFGTDGDTDWFYIRGF-DATQTGVFLDGLNLF--SYGFGGFQIDPFMLERVEVLKGP 167
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1196389603 150 ASVLYGRSSPGGIVALTSRKPSFDPGGEIKLFAGNNNQRGAAFDVTGALDDNDRVAARLSGMTRYADSQFDTLKEQRYAI 229
Cdd:PRK14050 168 ASVLYGGSNPGGIVNMVSKRPLDEPLYYTEIGINSYGNAFTGFDVGDKLSDDGTVRYRVTGKVAGGDNYSDYSEDLRGFI 247
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1196389603 230 MPSLTWRITDQTRLDLMAYL-HRDPEGGSHSGLPYEGTVVPHYGKKIANTFFEGEDDYDKYDRRENMVGYNFEHLFDNGW 308
Cdd:PRK14050 248 MPQITYAPDDATSLTVYGYLsGLDQVHVGNGFLPYVGTVVDAPFGKIDRDAFYGEPDIDNGSYAQQMLGYEFSHEFDNGW 327
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1196389603 309 SVRQKLRYLHTKVELNQVYAAGWLN-----------ETELNR-GYSGsDEKMNAITLDNQLDGSVDTWAVNHRLLIGIDY 376
Cdd:PRK14050 328 TFSQNARYGHLHKHEKGPYTYGYVGgatglpdptgpDYMLNRiGFEH-RSKVDSFSIDNRLEGEFDTGALTHNLLFGLDY 406
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1196389603 377 QDRSNDTTGYYGAFPAIDAFNPVYGAKPDYITMYSREKHKLRQTGYYLQDQMSW-ERWRLTLGGRYDQVSvSNIDKLNQT 455
Cdd:PRK14050 407 KYYRLDQVQACCGATPISATNPVYGTTQGANFVYLDQILTQQQIGIYAQDQIRFgDGWLVTLNGRYDYVD-TDSDARIGT 485
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1196389603 456 RSDLDKNNFSTRAALLYLFDNGFAPYISYSTAFTPTSFADENGNVLDPMKGKQWEAGLKYEPEGMNSQFSASVFRINQTN 535
Cdd:PRK14050 486 SYESNDGALSGRAGLAYEFDNGLTPYVSAATFFNPLVGTLASGPPLKPEEGEQYEAGIKYEPSFIDGLITASVFQITKKN 565
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1196389603 536 IATKEEPTDPYRSIGEIESKGVELEAISQLTDSFRLQAAYTYTDIRYKK-SSPEEQGKRAVYAPRNQASAWLSYDVKSGP 614
Cdd:PRK14050 566 VTVTDPLTFASTQLGEVRSRGFELEGKVNLDDNWKALASFTYTDLEITEdANPSLIGNSPYLVPETQASLWLDYAVTDGA 645
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1196389603 615 LDGLTLGSGVRYVNGITSDRLNTHTLPSYTLVDMAIGYDLskvgiKGLSAQLNVNNLTDKSYVAACNSLSYCYFGAERSI 694
Cdd:PRK14050 646 FEGVSLGAGVRYQGESWADEANTLKVPAATLFDAAIRYEK-----NDWGASLNVANLFDKEYVAGCQGLLVCGYGESRTI 720
|
....*...
gi 1196389603 695 VGSVSWKF 702
Cdd:PRK14050 721 TLKLSKKW 728
|
|
| TonB-siderophor |
TIGR01783 |
TonB-dependent siderophore receptor; This subfamily model encompasses a wide variety of ... |
58-702 |
1.10e-135 |
|
TonB-dependent siderophore receptor; This subfamily model encompasses a wide variety of TonB-dependent outer membrane siderophore receptors. It has no overlap with TonB receptors known to transport other substances, but is likely incomplete due to lack of characterizations. It is likely that genuine siderophore receptors will be identified which score below the noise cutoff to this model at which point the model should be updated. [Transport and binding proteins, Cations and iron carrying compounds, Transport and binding proteins, Porins]
Pssm-ID: 273805 [Multi-domain] Cd Length: 651 Bit Score: 413.73 E-value: 1.10e-135
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1196389603 58 ETPQSVSIITREQFEEQGAISVRQAVSYTPGVYSNQIGASNRFDYIVLRGFS-DGSLDNVYLDGLKMMGDTNShssLVVD 136
Cdd:TIGR01783 1 DIPQSVSVITRQELEDQQAGSLSEALQRVPGVVVGGSGGTTQFGNITIRGFGlEVDIDNVYLDGVPLLSRGNL---AIVD 77
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1196389603 137 PWFLENIEVVRGPASVLYGRSSPGGIVALTSRKPSFDPGGEIKLFAGNNNQRGAAFDVTGALDDNDRVAARLSGMTRYAD 216
Cdd:TIGR01783 78 PAMVERVEVLRGPASLLYGGSAPGGVINIVTKRPQDEPKGSVTFGAGTRSGYRTAFDLGGPLGADGTFRGRLNGARQDGD 157
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1196389603 217 SQFDTLKEQRYAIMPSLTWRITDQTRLDLMAYLHRDPEGGSHSGLPYEGTVvphYGKKIANTFFEGEDDYDKYDRREN-M 295
Cdd:TIGR01783 158 SFYDGAGEETRLGATATDWQLDDRTLLRLGAYYQKERDRGGYGGLPASGGT---SGRDLSSDRYLGTSSNRNYDDREYlS 234
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1196389603 296 VGYNFEHLFDNGWSVRQKLRYLHTKVELNQVYAAGWLN-ETELNRGYSGSDEKMNAITLDNQLDGSVDTWAVNHRLLIGI 374
Cdd:TIGR01783 235 YGLSLEYQFNDVWTGKQNLRYSYFDTDSNQVQASGYSSdGGLFGRSLTVVNVKQDRVQIDAGLDGEFETGPIEHDLLLGV 314
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1196389603 375 DYQDRSNDTTGYYGAFPaIDAFNPVYGAKPDY-ITMYSREKHKLRQT----GYYLQDQMSWERWRLTLGGRYDQVSVSNI 449
Cdd:TIGR01783 315 SYGQRTTNRFNNTGYPS-DNIYSLTATSSARTdIGDSPKDRALSSTTkalnGVALQRILLADKWTLTLGGRYDSVDVKSN 393
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1196389603 450 DKLNQTRSDLDKNNFSTRAALLYLFDNGFAPYISYSTAFTP----TSFADENGNVLDPMKGKQWEAGLKYEPEGMNSQfS 525
Cdd:TIGR01783 394 NGVAGSTGKRDDSQFTPSLGVAYKPTDDWSLYASYAESFKPggyyPKGAGNSGDILEPEKGKNYELGVRYDLGDSLLA-T 472
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1196389603 526 ASVFRINQTNIATKEEPTDPYRS-IGEIESKGVELEAISQLTDSFRLQAAYTYTDIRY-KKSSPEEQGKRAVYAPRNQAS 603
Cdd:TIGR01783 473 AALFRITKDNQLVQDPVNGTFSVnAGKTRNRGVELEARGYLTPGLSLSAGYTYTDAEFtEDTNGDTQGNTVPFVPKHTAS 552
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1196389603 604 AWLSYDVKSGPLdGLTLGSGVRYVNGITSDRLNTHTLPSYTLVDMAIGYDLSKVgiKGLSAQLNVNNLTDKSYVAACNSL 683
Cdd:TIGR01783 553 LWASYAPPVGDN-GLTLGGGVQYTGKAYVDGGNTGKVPSYTVVDLSVRYDLTKK--KNLTLALNVNNLFDRDYYTSGYRW 629
|
650 660
....*....|....*....|..
gi 1196389603 684 S---YCYFGAERSIVGSVSWKF 702
Cdd:TIGR01783 630 GpsaYIYPGAPRTVGLSVSYDF 651
|
|
| ligand_gated_channel |
cd01347 |
TonB dependent/Ligand-Gated channels are created by a monomeric 22 strand (22,24) ... |
62-702 |
2.31e-132 |
|
TonB dependent/Ligand-Gated channels are created by a monomeric 22 strand (22,24) anti-parallel beta-barrel. Ligands apparently bind to the large extracellular loops. The N-terminal 150-200 residues form a plug from the periplasmic end of barrel. Energy (proton-motive force) and TonB-dependent conformational alteration of channel (parts of plug, and loops 7 and 8) allow passage of ligand. FepA residues 12-18 form the TonB box, which mediates the interaction with the TonB-containing inner membrane complex. TonB preferentially interacts with ligand-bound receptors. Transport thru the channel may resemble passage thru an air lock. In this model, ligand binding leads to closure of the extracellular end of pore, then a TonB-mediated signal facillitates opening of the interior side of pore, deforming the N-terminal plug and allowing passage of the ligand to the periplasm. Such a mechanism would prevent the free diffusion of small molecules thru the pore.
Pssm-ID: 238657 [Multi-domain] Cd Length: 635 Bit Score: 404.53 E-value: 2.31e-132
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1196389603 62 SVSIITREQFEEQGAISVRQAVSYTPGVYSNQIGASNRfDYIVLRGFsDGSLDNVYLDGLKMMGDTNSHS--SLVVDPWF 139
Cdd:cd01347 1 SVSVITAEDIEKQPATSLADLLRRIPGVSVTRGGGGGG-STISIRGF-GPDRTLVLVDGLPLASSNYGRGvdLNTIPPEL 78
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1196389603 140 LENIEVVRGPASVLYGRSSPGGIVALTSRKPSFDPGGEIKLFAGN---NNQRGAAFDVTGALDDNDRVAARLSGMTRYAD 216
Cdd:cd01347 79 IERVEVLKGPSSALYGSGAIGGVVNIITKRPTDEFGGSVTAGYGSdnsGSSGGGGFDVSGALADDGAFGARLYGAYRDGD 158
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1196389603 217 SQF------DTLKEQRYAIMPSLTWRITDQTRLDLMAYLHRDPEGGSHSGLPYEGTVVPHygKKIANTFFEGEDDYDKYD 290
Cdd:cd01347 159 GTIdgdgqaDDSDEERYNVAGKLDWRPDDDTRLTLDAGYQDQDADGPGGTLPANGTGSSL--GGGPSSNTNGDRDWDYRD 236
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1196389603 291 RRENMVGYNFEHLF-DNGWSVRQKLRYLHTKVELNQVYAAGWLN--ETELNRGYSGSDEKMNAITLDNQLDGSVDTWAVN 367
Cdd:cd01347 237 RYRKRASLGLEHDLnDTGWTLRANLSYSYTDNDGDPLILNGGNNaaGGDLGRSGYSSERDTTQLGFDAGLNAPFGTGPVA 316
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1196389603 368 HRLLIGIDYQDRSNDTtgyygafpaidafnpvygakpdyitmysrekhklRQTGYYLQDQMSW-ERWRLTLGGRYDQVSV 446
Cdd:cd01347 317 HTLTLGVEYRREELDE----------------------------------KQTALYAQDTIELtDDLTLTLGLRYDHYDQ 362
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1196389603 447 SNIDKLNQ-TRSDLDKNNFSTRAALLYLFDNGFAPYISYSTAFTPTSFADENGNV------------LDPMKGKQWEAGL 513
Cdd:cd01347 363 DSKDTIAGgTTAKKSYSHWSPSLGLVYKLTDGLSLYASYSQGFRAPSLGELYGGGshggtaavgnpnLKPEKSKQYELGL 442
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1196389603 514 KYEPEGmNSQFSASVFRINQTN-IATKEEPTDP-----YRSIGEIESKGVELEAISQLTDSFRLQAAYTYTDIRYKKSSP 587
Cdd:cd01347 443 KYDPGD-GLTLSAALFRIDIKNeIVSTPTNTGLglvtvYVNGGKARIRGVELEASYDLTDGLGLTGSYTYTDTEVKRTDG 521
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1196389603 588 EEQGKRAVYAPRNQASAWLSYDVksgPLDGLTLGSGVRYV---NGITSDRLNTHTLPSYTLVDMAIGYDLSkvgiKGLSA 664
Cdd:cd01347 522 ATTGNRLPGIPKHTANLGLDYEL---PDEGLTAGGGVRYRgkqYADTANGNNTVKVPGYTLVDLSASYQFT----KNLTL 594
|
650 660 670 680
....*....|....*....|....*....|....*....|.
gi 1196389603 665 QLNVNNLTDKSYVAACNSL---SYCYFGAERSIVGSVSWKF 702
Cdd:cd01347 595 RLGVNNLFDKDYYTSLSVRgsgLYGYYGPGRTYYLSVSYKF 635
|
|
| PRK14049 |
PRK14049 |
ferrioxamine B receptor precursor protein; Provisional |
41-702 |
3.16e-121 |
|
ferrioxamine B receptor precursor protein; Provisional
Pssm-ID: 172541 [Multi-domain] Cd Length: 726 Bit Score: 378.47 E-value: 3.16e-121
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1196389603 41 VTSQMQSGAtKIATPDIETPQSVSIITREQFEEQGAISVRQAVSYTPGVYSNQIGASNRFDYIVLRGFsDGSLDNVYLDG 120
Cdd:PRK14049 62 VATSSATGA-KVDTPFLETPQSISSVTEQQLKDRNPQTLLETLAYTPGARVGAFGFDPRFDAFFVRGF-DVTYTGVFRDN 139
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1196389603 121 LKMMGdtNSHSSLVVDPWFLENIEVVRGPASVLYGRSSPGGIVALTSRKPSFDPGGEIKLFAGNNNQRGAAFDVTGALDD 200
Cdd:PRK14049 140 LRQPG--ASSSIFKTEPYGLEGVSILRGPSSALYGASGAGGLFNLITKRPTEEPLREVQVQYGTNNRYQGQFDFSGPVNE 217
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1196389603 201 NDRVAARLSGMTRYADSQFDTLKEQRYAIMPSLTWRITDQTRLDLMAYLHRDPEGGshSGLPYEGtvvPHYGKkiANTFF 280
Cdd:PRK14049 218 TDPVYYRLTGLLRDADTEQVGVPDDRAYIAPAFTWKPDEDTRLTVLGEYSRTKTGG--TAAYYND---PLTGE--VTDIF 290
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1196389603 281 EGEDDYDKYDRRENMVGYNFEHLFDNGWSVRQKLRYLHTKVELNQV--YAAGWLNETELNRGYSGSDEKMNAITLDNQLD 358
Cdd:PRK14049 291 AGNPAFNDSVQKQGRIGYEFEHRLNDTFVFRQNARVSTLNIDADWAfaYAPNAADPTLLDSSAGTYDERLTAFVIDNQLE 370
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1196389603 359 GSVDTWAVNHRLLIGIDYQDRSNDTTGYYGAFPAIDAFNPVYGAKPDYITMYSREKHKLRQTGYYLQDQMSWERWRLTLG 438
Cdd:PRK14049 371 AKFDTGAFEHTLLAGVDYTKLRFRALNGRGVSPPLDTKNPTQGRPVAAIDFSTRTVQDQWQLGTYLQDQIRYDAWTLTAG 450
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1196389603 439 GRYDQVS--VSNIDKLNQTRSDLDKNN--FSTRAALLYLFDNGFAPYISYSTAFTPTS-FADENGNVLDPMKGKQWEAGL 513
Cdd:PRK14049 451 GRYDWVStdTDTTDLATDSLTTVSQKDkeFSGRIGLTYETDFGLAPYISYSTAFSPNAgFNRATNQPFKPTESEQQEVGV 530
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1196389603 514 KYEPEGMNSQFSASVFRINQTNIATKEEPTDPYRSI------GEIESKGVELEAISQLTDSFRLQAAYTYTDIRYKKSSP 587
Cdd:PRK14049 531 KYLLPNSNTLITAALFNIDQTNGLYYEVVFLAAGPTniqvqrGKLRSRGFELEANTSLDNGLSLIASYTYTDVKIIQGPE 610
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1196389603 588 EEQGKRAVYAPRNQASAWLSYDV-KSGPLDGLTLGSGVRYVNGITSDRLNTHTLPSYTLVDMAIGYDLSKVGIK--GLSA 664
Cdd:PRK14049 611 GTIGNEVSSVPNHMASAWAHYTLpEGGPLYGLGLGAGARFVGSSYGNDQNTFKNSSRVLFDASVGYDFAAIDKKyeGLML 690
|
650 660 670
....*....|....*....|....*....|....*...
gi 1196389603 665 QLNVNNLTDKSYvAACnSLSYCYFGAERSIVGSVSWKF 702
Cdd:PRK14049 691 QVNATNLFDRRK-AVC-TAGFCYRDQGRTVIGSLRYNW 726
|
|
| CirA |
COG1629 |
Outer membrane receptor protein, Fe transport [Inorganic ion transport and metabolism]; |
37-689 |
4.18e-114 |
|
Outer membrane receptor protein, Fe transport [Inorganic ion transport and metabolism];
Pssm-ID: 441236 [Multi-domain] Cd Length: 644 Bit Score: 357.60 E-value: 4.18e-114
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1196389603 37 ETIVVTsqmqsgATKIATPDIETPQSVSIITREQFEEQGAISVRQAVSYTPGVYSNQigASNRFDYIVLRGFSDGSLD-N 115
Cdd:COG1629 2 EEVVVT------ATRTDESLQDVPGSVSVISREQLEDQPATDLGDLLRRVPGVSVTS--AGGGAGQISIRGFGGGGNRvL 73
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1196389603 116 VYLDGLKM-MGDTNSHSSLVVDPWFLENIEVVRGPASVLYGRSSPGGIVALTSRKPSFDPGGEIKLFAGNNNQRGAAFDV 194
Cdd:COG1629 74 VLVDGVPLnDPSGGDGGLSYIDPEDIERVEVLRGPSSALYGSGALGGVINIVTKKPKDGKGGEVSASYGSYGTYRASLSL 153
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1196389603 195 TGAlddNDRVAARLSGMTRYADSQFDTLKEQRYAIMPSLTWRITDQTRLDLmAYLHRDPEGGSHSGLPYEGTVVPHYGKK 274
Cdd:COG1629 154 SGG---NGKLAYRLSASYRDSDGYRDNSDSDRYNLRAKLGYQLGDDTRLTL-SASYSDSDQDSPGYLTLAALRPRGAMDD 229
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1196389603 275 IANTFfegEDDYDKYDRRENMVGYNFEHlFDNGWSVRQKLRYLHTKVELNQVYAAGWLNETELNRgysgSDEKMNAITLD 354
Cdd:COG1629 230 GTNPY---SNDTDDNTRDRYSLSLEYEH-LGDGLKLSASAYYRYDDTDLDSDFTPTPADGGTLEQ----TDFDNRTYGLE 301
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1196389603 355 NQLDGSvDTWAVNHRLLIGIDYQDRSNDTTGYygafpaidaFNPVYGAKPDYITMYSREKHKLRQTGYYLQDQMSW-ERW 433
Cdd:COG1629 302 LRLTYD-LGFGGKHTLLVGLDYQRQDLDGSGY---------PLDLGSGSLPTLTSGADDDGTTTSLALYAQDTYKLtDKL 371
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1196389603 434 RLTLGGRYDQVSVSNIDKLNQTRS---DLDKNNFSTRAALLYLFDNGFAPYISYSTAFTPTSFADENGNV---------- 500
Cdd:COG1629 372 TLTAGLRYDYVSYDVDDTVTGTDSasgSRSYSAFSPSLGLTYQLSPNLSLYASYSRGFRAPTFGELYANGtdpysvgnpd 451
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1196389603 501 LDPMKGKQWEAGLKYEPEGMNSQFSASVFRINQTN-IATKEEPTDP-----YRSIGEIESKGVELEAISQLTDSFRLQAA 574
Cdd:COG1629 452 LKPETSTNYELGLRYRLLDGRLSLSLALFYSDVDNeILSVPLPNDSgfstyYTNAGKARSYGVELELSYQLTPGLSLNAS 531
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1196389603 575 YTYTDIRYKKS---SPEEQGKRAVYAPRNQASAWLSYDvksgPLDGLTLGSGVRYVNGITSDRLNTHTLP-SYTLVDMAI 650
Cdd:COG1629 532 YSYTDAKFDDDtdgSADLDGNRLPGVPPLTANLGLTYE----FPGGWSLGLGVRYVGDRYLDDANTQGAPgGYTLVDLGA 607
|
650 660 670
....*....|....*....|....*....|....*....
gi 1196389603 651 GYDLSkvgiKGLSAQLNVNNLTDKSYVAACNSLSYCYFG 689
Cdd:COG1629 608 GYRFG----DNLTLSLGVDNLFDKKYATSLSVRASNVRG 642
|
|
| FepA |
COG4771 |
Outer membrane receptor for ferrienterochelin and colicins [Inorganic ion transport and ... |
12-656 |
8.26e-72 |
|
Outer membrane receptor for ferrienterochelin and colicins [Inorganic ion transport and metabolism];
Pssm-ID: 443803 [Multi-domain] Cd Length: 612 Bit Score: 244.77 E-value: 8.26e-72
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1196389603 12 RLALLVGWVTGGVAFPLLAQETTKNETIVVTsqmqsgATKIATPDIETPQSVSIITREQFEEQGAISVRQAVSYTPGVYS 91
Cdd:COG4771 3 LASLLLLLALAAQAADALAEDATELEEVVVT------ATRTEQSLSDAPASVSVITAEEIEKLGATDLADALRLLPGVSV 76
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1196389603 92 NQIGASNRFDYIVLRGFSDGSLdNVYLDGLKMMGDTNSHSS--LVVDPWFLENIEVVRGPASVLYGRSSPGGIVALTSRK 169
Cdd:COG4771 77 TRSGGRGGSSGISIRGLGGDRV-LVLIDGVPVNNPALGGGGdlSYIPPDDIERIEVIRGPASALYGSDAIGGVINIITKK 155
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1196389603 170 PSFDPGGEIKLFAGNNNQRGAAFDVTGAlDDNDRVAARLSGMTRYADSQFDTL--------KEQRYAIMPSLTWRITDQT 241
Cdd:COG4771 156 PTDELEGSVSLGYGSNGNGTYSGSLSLG-GPGDKLSFLLSGSYRDRDGYLDYRnggfvgnsGYERYNLNAKLGYRLSDNH 234
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1196389603 242 RLDLMAYLHRDPEGGSHSGLPYegtvvphygkkiANTFFEGEDDYDKYDRRENmvgYNFEHLFDNGWSVRQKLRYLHTKV 321
Cdd:COG4771 235 RLSLSGGYSRQDRDGGPPTLGD------------TEISSDNAGDRDTTTDRGN---YSLRYNGDLGDNLDLSLYYSRTDR 299
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1196389603 322 ElnqvyaagWLNETELNRGYSGSDEKMNAITLDNQLDGsvdTWAVNHRLLIGIDYQDRSNDTTGYYGAFpaidafnpvyg 401
Cdd:COG4771 300 D--------STNGSLGGSTGSFSDSDDTTYGLELDLTY---PLGGNHTLTLGAEYRYDDLDSSSFLGGA----------- 357
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1196389603 402 akpdyitmysreKHKLRQTGYYLQDQMSW-ERWRLTLGGRYDQVSVSNIDklnqtrsdlDKNNFSTRAALLYLFDNGFAP 480
Cdd:COG4771 358 ------------DASRDTYGLFAQDEWKLtDKLTLTAGLRYDYYSTFGAS---------NYTAFSPRLGLRYDLSDNLTL 416
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1196389603 481 YISYSTAF------------TPTSFADENGNV-LDPMKGKQWEAGLKYEPEGMNSQFSASVFRINQTN-IATKEEPTDP- 545
Cdd:COG4771 417 RASYGRGFrapslaelygsgTGTPGRYVLGNPdLKPETSDNYELGLEYRLGNGGLSLSLTGFYTDIKDlIVLVPVGPGPg 496
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1196389603 546 ----YRSIGEIESKGVELEAISQLTDSFRLQAAYTYTDIRYKKSSPeeqGKRAVYAPRNQASAWLSYDVKSGPLDGLTLG 621
Cdd:COG4771 497 dvlqYENVGKARTYGLELELKYRLGKGLTLTASYTYLDSKIDDGDT---GEPLPNVPPHKANLGLDYRLPKWWLLLLLTR 573
|
650 660 670
....*....|....*....|....*....|....*
gi 1196389603 622 SGVRYVNGITSDRLNTHTlPSYTLVDMAIGYDLSK 656
Cdd:COG4771 574 YYGGRYVTPPSGRLEGYT-PGYTLLDLRASYKLTK 607
|
|
| FecA |
COG4772 |
Outer membrane receptor for Fe3+-dicitrate [Inorganic ion transport and metabolism]; |
30-702 |
1.44e-68 |
|
Outer membrane receptor for Fe3+-dicitrate [Inorganic ion transport and metabolism];
Pssm-ID: 443804 [Multi-domain] Cd Length: 681 Bit Score: 237.52 E-value: 1.44e-68
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1196389603 30 AQETTKNETIVVTsqmqsgATKIATPDI-ETPQSVSIITREQFEEQGAISVRQAVSYTPGVYsnqigASNRFDY-----I 103
Cdd:COG4772 17 AEAATTLETVVVT------GSRAAEARLkDVPGSVSVVDREELENQAATSLREVLRRVPGVN-----VQEEDGFglrpnI 85
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1196389603 104 VLRGFS-DGSLD-NVYLDGLKMMGDTNSHSSLVVDPWF--LENIEVVRGPASVLYGRSSPGGIVALTSRKPSFDPGGEIK 179
Cdd:COG4772 86 GIRGLGpRRSRGiTLLEDGIPIAPAPYGDPAAYYFPDLerMERIEVLRGAAALRYGPQTVGGAINFVTRTIPTAFGGELR 165
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1196389603 180 LFAGNNNQRGAAFDVTGALDDndrVAARLSGMTRYADSQFDTLKEQRYAIMPSLTWRITDQTRLDLMAYlHRDPEGGSHS 259
Cdd:COG4772 166 VTGGSFGYRRTHASVGGTVGN---FGYLVEYSRKRGDGFRDNSGFDINDFNAKLGYRLSDRQELTLKFQ-YYDEDANTPG 241
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1196389603 260 GLpyegtvvphygkkianTFFEGEDD-------YDKYDRRENMVGYNFEHLFDNGWSVRqkLRYLHTKVELNQVYAAGWL 332
Cdd:COG4772 242 GL----------------TDAQFDADprqsyrpADQFDTRRTQLSLRYEHQLSDNTTLT--TTAYYNDFSRNWYIRQNTA 303
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1196389603 333 NETELNRGYSGSDEKMNAITLDNQLDGSVDTWAVNHRLLIGIDYQDRSNDTTGYYGafpaidafnpVYGAKPDYITMYSR 412
Cdd:COG4772 304 DPNTPGLGLRGNPRGYRSYGIEPRLTHRFELGGVPHTLEVGLRYHREEEDRKQYVN----------TYGQGRSGAGLRRD 373
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1196389603 413 EKHKLRQTGYYLQDQMSW-ERWRLTLGGRYDQVSVSNIDKLNQ-----TRSDLDKNNFSTRAALLYLFDNGFAPYISYST 486
Cdd:COG4772 374 RRFSADALAAYAQNRFELtGRLTLTPGLRYEHIRRDRTDRYSTrtggdDSGSNSYSEFLPGLGLLYQLTDNLQLYANVSR 453
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1196389603 487 AFTPTSFADENGNV-----LDPMKGKQWEAGLKYEPEGMNSqFSASVFRINQTN----IATKEEPTDPYRSIGEIESKGV 557
Cdd:COG4772 454 GFEPPTFGDLAYGNggnpdLKPEKSWNYELGTRGRIGNGLS-AEVALFYIDYDNelgsCSAAGGDRSTFTNAGETRHQGL 532
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1196389603 558 ELEAISQL----TDSFRLQAAYTYTDIRYKKSS-PEEQGKRAVYAPRNQASAWLSYDVKsgpldGLTLGSGVRYVNGITS 632
Cdd:COG4772 533 ELALDYDLlkggGLGLPLFAAYTYTDAEFTSDFgPVFAGNRLPYVPRHQLTAGLGYEHG-----GWTANLNGRYVSEQFT 607
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1196389603 633 DRLNT------HTLPSYTLVDMAIGYDLSKvgikGLSAQLNVNNLTDKSYVAacnSLSYCYF-----GAERSIVGSVSWK 701
Cdd:COG4772 608 DAANTvadgsfGKIPSYTVLDLSASYDFGK----NLSLFAGVNNLFDKRYIA---SRAPNYAagirpGPPRTVYAGLRLK 680
|
.
gi 1196389603 702 F 702
Cdd:COG4772 681 F 681
|
|
| PRK09840 |
PRK09840 |
catecholate siderophore receptor Fiu; Provisional |
13-702 |
2.37e-63 |
|
catecholate siderophore receptor Fiu; Provisional
Pssm-ID: 182105 [Multi-domain] Cd Length: 761 Bit Score: 224.69 E-value: 2.37e-63
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1196389603 13 LALLVGWVTGGV-AFPLLAQETTKNETIVVTSQM---------QSGATKIATPDIETPQSVSIITREQFEEQGAISVRQA 82
Cdd:PRK09840 15 LAFFAGLCIGITpVAQALAAEGQTNADDTLVVEAstpslyapdQSADPKFSQPLADTTQTITVISEQVIKDQGATNLTEA 94
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1196389603 83 VSYTPGV---YSNQIGASNRFDYIVLRGFSDGSldNVYLDGLKMMGdtnshsSLVVDPWFLENIEVVRGPASVLYGRSSP 159
Cdd:PRK09840 95 LRNVPGVgtfFAGENGNTTTGDAIYMRGFDTSN--SIYVDGIRDIG------SISRDTFNTEQVEVIKGPSGTDYGRSAP 166
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1196389603 160 GGIVALTSRKPSFDPGGEIKLFAGNNNQRGAAFDVTGALDDNdrVAARLSGMTRYA-DSQFDTLKEQRYAIMPSLTWRIT 238
Cdd:PRK09840 167 TGSINMISKQPRNDSGIDASASIGSAWFRRGTLDVNQVIGDT--TAVRLNVMGEKThDAGRDKVKNERYGVAPSVAFGLG 244
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1196389603 239 DQTRLDLmAYLHRD----PEGGSHS-GLP-YEG-----TVVPHYGKKIANTFFEGEDDYDkyDRRENMVGYNFEHLFDNG 307
Cdd:PRK09840 245 TANRLYL-NYLHVTqnntPDGGIPTiGLPgYSApsagrAALNHAGKVDTHNFYGTDSDYD--DSTTDTATMRFEHDINDN 321
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1196389603 308 WSVRQKLRYLHTKvelnQVY--------AAGWLNETE-------LNRGYSGSDEKMNAITLDNQLDGSVDTWAVNHRLLI 372
Cdd:PRK09840 322 TTLRNTTRWSRVK----QDYlltaimggASNITTPTPsdvntwtWSRTANTKDVSNKILTNQTNLTSTFYTGSIGHDVST 397
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1196389603 373 GIDYQDRSNDTTGYYG-AFPAIDAFNPV-YGAKPDYITMYSREKHKLRQTGYYLQDQMSW-ERWRLTLGGR-------YD 442
Cdd:PRK09840 398 GVEFTRETQTNYGVNPvTLPAVNLYHPDsSIHPGGLTRNGANANGQTDTFAIYAFDTLQLtRDWELNGGIRldnyhteYD 477
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1196389603 443 QVSVSNIDKLNQ-------------TRSDLDK--NNFSTRAALLY-LFDNGfAPYISYSTAFTP---TSFA--------D 495
Cdd:PRK09840 478 SATACGGSGRGAitcpagvakgspvTTVDTAKsgNLVNWKAGALYkLTENG-NVYINYAVSQQPpggSNFAlaqsgsgnS 556
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1196389603 496 ENGNVLDPMKGKQWEAGLKYEPEGMNSQFSASVFRINQTN-IATkeEPTDPYRSIGEIESKGVELEAISQLTDSFRLQAA 574
Cdd:PRK09840 557 ANRTDFKPQKANTSEIGTKWQVLDKRLLLTAALFRTDIENeVEQ--NDDGTYSQYGKKRVEGYELSVAGNITPAWQVIAG 634
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1196389603 575 YTYTDIRYKKSSPEEQ-GKRAV-YAPRNQASAWLSYDVKsgplDGLTLGSGVRYVNGITSDRLNTHTLPSYT----LVDM 648
Cdd:PRK09840 635 YTQQKATVKNGKDVAQdGSSSLpYTPEHAFTLWSQYQAT----DDLSVGGGARYIGSMHRGSDGAVGTPAFTegywVADA 710
|
730 740 750 760 770
....*....|....*....|....*....|....*....|....*....|....*
gi 1196389603 649 AIGYDLSKvgikGLSAQLNVNNLTDKSYVAACNSLSYCYF-GAERSIVGSVSWKF 702
Cdd:PRK09840 711 KLGYRVNR----NLDLQLNVYNLFDTDYVASINKSGYRYHpGEPRTFLLTANMHF 761
|
|
| TonB_dep_Rec |
pfam00593 |
TonB dependent receptor; This model now only covers the conserved part of the barrel structure. |
271-701 |
1.89e-56 |
|
TonB dependent receptor; This model now only covers the conserved part of the barrel structure.
Pssm-ID: 395474 [Multi-domain] Cd Length: 475 Bit Score: 199.61 E-value: 1.89e-56
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1196389603 271 YGKKIANTFFEGEDDYDKYDRRENMVGYNFEHLFDNGWSVRQKLRYLHTKVELNQVYAAGWLNEtelNRGYSGSDEKMNA 350
Cdd:pfam00593 40 DGGYLGDRPLYYGRDYSDTDRKRLSLGYDYDLGDGLSWLSTLRLGLRYSSLDGDYTSNSSGLSG---AGDYLSDDRLYGL 116
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1196389603 351 ITLDNQLDGSVDtwaVNHRLLIGIDYQDRSNDTTGYygAFPAIDAFNPVYGAKpdyitmYSREKHKLRQTGYYLQDQMSW 430
Cdd:pfam00593 117 YGLDGDLELSLD---LSHDLLLGVELRTAGLDYRRL--DDDAYDPYDPANPSS------SSYSDTTTDSYGLYLQDNIKL 185
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1196389603 431 -ERWRLTLGGRYDQVSVSNIDKLNQ-TRSDLDKNNFSTRAALLYLFDNGFAPYISYSTAFTPTSFAD------------- 495
Cdd:pfam00593 186 tDRLTLTLGLRYDHYSTDGDDGNGGgDNFSRSYSAFSPRLGLVYKPTDNLSLYASYSRGFRAPSLGElygsgsgggggav 265
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1196389603 496 ENGNV-LDPMKGKQWEAGLKYEPEgmNSQFSASVFRINQTNIAT-------KEEPTDPYRSIGEIESKGVELEAISQLTD 567
Cdd:pfam00593 266 AGGNPdLKPETSDNYELGLKYDDG--RLSLSLALFYIDIKNLITsdpdgpgLGGTVYTYTNVGKARIRGVELELSGRLWG 343
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1196389603 568 SFRLQAAYTYTDIRYKKSsPEEQGKRAVYAPRNQASAWLSYDvksGPLDGLTLGSGVRYV---NGITSDRLNTHTLPSYT 644
Cdd:pfam00593 344 LGLSGGGYTYTDADDDAD-ADDTGNPLPNVPRHTANLGLTYD---FPLGGWGARLGARYVgsgERRYGDAANTFKTPGYT 419
|
410 420 430 440 450 460
....*....|....*....|....*....|....*....|....*....|....*....|
gi 1196389603 645 LVDMAIGYDLSkvgiKGLSAQLNVNNLTDK---SYVAACNSLSYCYFGAERSIVGSVSWK 701
Cdd:pfam00593 420 LVDLSAGYRLN----KNLTLRLGVNNLFDKyykRYYSSGGGNLGGYPGPGRTFYLGLSYK 475
|
|
| TonB-hemin |
TIGR01785 |
TonB-dependent heme/hemoglobin receptor family protein; This model represents the ... |
37-702 |
2.03e-49 |
|
TonB-dependent heme/hemoglobin receptor family protein; This model represents the TonB-dependent outer membrane heme/hemoglobin receptor/transporter found in bacteria which live in contact with animals (which contain hemoglobin or other heme-bearing globins) or legumes (which contain leghemoglobin). Some species having hits to this model such as Nostoc, Caulobacter and Chlorobium do not have an obvious source of hemoglobin-like proteins in their biological niche and so the possibility exists that they act on some other substance. [Transport and binding proteins, Cations and iron carrying compounds, Transport and binding proteins, Porins]
Pssm-ID: 273807 [Multi-domain] Cd Length: 665 Bit Score: 184.13 E-value: 2.03e-49
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1196389603 37 ETIVVTsqmqsgATKIATPDIETPQSVSIITREQFEEQGAISVRQAVSYTPGVYSNQIGASNRFDyIVLRGFSDGSLdNV 116
Cdd:TIGR01785 2 DTVTVT------ATRTRQVLSEAPASVSVISGEQIESKQANNLADALNTVPGVDVTGGGRPPGQS-INIRGLQDNRV-LV 73
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1196389603 117 YLDGLKMMGDTNSH--SSLVVDPWFLENIEVVRGPASVLYGRSSPGGIVALTSRKPS------FDPGGEIKL-FAGNNNQ 187
Cdd:TIGR01785 74 VVDGARQNYQRGGAhnGSLFVDPELLKRIEIVKGPSSSLYGSGALGGVVAFRTKDAAdllrpgQLFGGLAKLsYGSNNNS 153
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1196389603 188 RGAAFDVTGALDDNdrVAARLSGMTRYAD-----SQFDTLKE--QRYAIMPSLTWRITDQTRLDLmayLHRDPEG----G 256
Cdd:TIGR01785 154 FGGSVAVAGRLDDN--LDALVAATYRDGGnyrngNKEEATNSayVQKNLLAKLGWQLDDAQRLEF---SYFTTEGsldeA 228
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1196389603 257 SHSGLPYE---GTVVPHYGKKIANtffegeDDYDkydrrenmVGYNFEHLFDNGWSVRQKLRYLHTKVElNQVYAAGWLN 333
Cdd:TIGR01785 229 QNSGPGTEyvlGSSSTLLASSTRD------RSAT--------LTYNWTPEDNPWLDATASLYYNRTEND-NDRSARGVGR 293
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1196389603 334 EtelnrgySGSDEKMNAITLDNQLDGSVDTWAvnhRLLIGIDYqdrSNDTTGYYGAFPAIDafNPVYGAKPDYITMysre 413
Cdd:TIGR01785 294 E-------EGYQYTTYGATLQNTSRFDVASWS---TLTYGVDW---MKDKRRTESFDPNSV--TTIVPNPPSAKEY---- 354
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1196389603 414 khklrQTGYYLQDQMSW--ERWRLTLGGRYDQVSVS---NIDKLNQTRSDldkNNFSTRAALLYLFDNGFAPYISYSTAF 488
Cdd:TIGR01785 355 -----FFGLFLQDNIPLldDRLTLSAGLRYDHYKLSpktTADTEAVDRSY---SRWSPSLGLSYKPVDWLTLYASYSQGF 426
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1196389603 489 TPTS----------FADENGNV------LDPMKGKQWEAGLKYEPEGMNS-----QFSASVFR------INQT-----NI 536
Cdd:TIGR01785 427 RAPSidelygtgdhPGTPGGYTfapnpnLKPETSKTWELGANLSFDNLLLdndqlQFKVAYFYndvkdfIDLTigvtdNV 506
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1196389603 537 ATKEEPTDPYRSIGEIESKGVELEAISQLTDsFRLQAAYTYTDiryKKSSPEEQGKRAVyaPRNQASAWLSYDVksgPLD 616
Cdd:TIGR01785 507 TAGMNNITQYVNIDGARIRGIEASASYDAGL-WATGLSYGYTI---GKDQNTNQWLSNI--PPLKLVVTVGYRF---PDR 577
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1196389603 617 GLTLGSGVRYV-----NGITSDRLNTH--TLPSYTLVDMAIGYDLSKVgiKGLSAQLNVNNLTDKSYVAAcnsLSYCYFG 689
Cdd:TIGR01785 578 RLDLGAKAAYYerqseSPTTEDVAANGllTTPGYTVVDLYATYQPNAV--KGLTVRFGVNNLTDRKYTPA---QSVPGAG 652
|
730
....*....|...
gi 1196389603 690 AERSIVGSVSWKF 702
Cdd:TIGR01785 653 PGRNFKGSVKYQF 665
|
|
| PRK10003 |
PRK10003 |
ferric-rhodotorulic acid outer membrane transporter; Provisional |
14-702 |
6.88e-45 |
|
ferric-rhodotorulic acid outer membrane transporter; Provisional
Pssm-ID: 236640 [Multi-domain] Cd Length: 729 Bit Score: 171.59 E-value: 6.88e-45
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1196389603 14 ALLVGWVTGGVAFPLLAQETTKNETIVVTSQMQSGA---------------TKIATPDIETPQSVSIITREQFEEQGAIS 78
Cdd:PRK10003 18 SLLAGCIALALLPSAAFAAPATEDTVIVEGSATAPVddgeqdysvkttsagTKMQMTQRDIPQSVSIVSQQRMEDQQLQT 97
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1196389603 79 VRQAVSYTPGVYSNQIGaSNRFDYIVlRGFSdgsLDNVYLDGLKM-------MGDTNSHSSLvvdpwfLENIEVVRGPAS 151
Cdd:PRK10003 98 LGEVMENTLGISKSQAD-SDRALYYS-RGFQ---IDNYMVDGIPTyfesrwnLGDALSDTAL------FERVEVVRGATG 166
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1196389603 152 VLYGRSSPGGIVAL-----TSRKPSFDPGGEiklFAGNNNQRGAAfDVTGALDDNDRVAARLSGMTRYADSQFDTLKEQR 226
Cdd:PRK10003 167 LMTGTGNPSAAINMvrkhaTSREFKGDVSAE---YGSWNKQRYVA-DLQSPLTEDGKVRARIVAGYQNNDSWLDRYNSEK 242
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1196389603 227 YAIMPSLTWRITDQTRLDL-MAYLHRDPEGGSHSGLP--YEGTVVPHYGKKiantfFEGEDDYDKYDRRENMVGYNFEHL 303
Cdd:PRK10003 243 TFFSGIVDADLGDLTTLSAgYEYQRIDVNSPTWGGLPrwNTDGSSNSYDRA-----RSTAPDWAYNDKEINKVFMTLKQR 317
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1196389603 304 FDNGWSVrqKLRYLHTKVELNQ--VYAAGWLNET--ELNRGYSGSDEKMNAI-------------TLDNQLDGSVDTWAV 366
Cdd:PRK10003 318 FADTWQA--TLNATHSEVEFDSkmMYVDAYVDKAtgMLVGPYSNYGPGFDYVggtgwnsgkrkvdALDLFADGSYELFGR 395
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1196389603 367 NHRLLIGIDYQDRSN------DTTG---------YYGAFPAidafnPVYGAKPDYITMYSREKHKLRQTGYYLQDQMSwe 431
Cdd:PRK10003 396 QHNLMFGGSYSKQNNryfsswANIFpdeigsfynFNGNFPQ-----TDWSPQSLAQDDTTHMKSLYAATRVSLADPLH-- 468
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1196389603 432 rwrLTLGGRYDQVsvsNIDKLNQtrsDLDKNNFSTRAALLYLFDNGFAPYISYSTAFTPTSFADENGNVLDPMKGKQWEA 511
Cdd:PRK10003 469 ---LILGARYTNW---RVDTLTY---SMEKNHTTPYAGLVYDINDNWSTYASYTSIFQPQNDRDSSGKYLAPITGNNYEL 539
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1196389603 512 GLKyePEGMNSQFSAS--VFRINQTNIATKEEPTDP-------YRSIGEIESKGVELEAISQLTDSFRLqaayTYTDIRY 582
Cdd:PRK10003 540 GLK--SDWMNSRLTTTlaIFRIEQDNVAQSTGTPIPgsngetaYKAVDGTVSKGVEFELNGAITDNWQL----TFGATRY 613
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1196389603 583 kksSPEEQGKRAV--YAPRNQASAWLSYDVKSGPldGLTLGSGVRYVNGITSDRLNTHTL-----PSYTLVDMAIGYDLS 655
Cdd:PRK10003 614 ---IAEDNEGNAVnpNLPRTTVKLFTRYRLPVMP--ELTVGGGVNWQNRVYTDTVTPYGTfraeqGSYALVDLFTRYQVT 688
|
730 740 750 760
....*....|....*....|....*....|....*....|....*..
gi 1196389603 656 kvgiKGLSAQLNVNNLTDKSYVAacNSLSYCYFGAERSIVGSVSWKF 702
Cdd:PRK10003 689 ----KNFSVQGNVNNLFDKTYDT--NVEGSIVYGAPRNFSITATYQF 729
|
|
| BtuB |
COG4206 |
Outer membrane cobalamin receptor protein BtuB [Coenzyme transport and metabolism]; |
39-248 |
1.88e-28 |
|
Outer membrane cobalamin receptor protein BtuB [Coenzyme transport and metabolism];
Pssm-ID: 443355 [Multi-domain] Cd Length: 276 Bit Score: 115.35 E-value: 1.88e-28
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1196389603 39 IVVTsqmqsgATKIATPDIETPQSVSIITREQFEEQGAISVRQAVSYTPGVYSNQIGASNRFDYIVLRGFSDGSLdNVYL 118
Cdd:COG4206 1 VVVT------ATRLEQSKSDLTGSVTVIDAEELERSGATSLADALRRVPGVQVSSSGGPGSAASISIRGLGSNQT-LVLI 73
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1196389603 119 DGLKMMGDTNSHSSLV-VDPWFLENIEVVRGPASVLYGRSSPGGIVALTSRKPSFDPGGEIKLFAGNNNQRGAAFDVTGa 197
Cdd:COG4206 74 DGVPLNDPSLGGVDLSlIPPDDIERIEVLKGAASALYGSDAIGGVINITTKKGKKGFKGSVSASYGSFGTRRLSASLSG- 152
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....*...
gi 1196389603 198 ldDNDRVAARLSGMTRYADSQFDTLKEQR-------YAIMPSLTWRITDQTRLDLMAY 248
Cdd:COG4206 153 --GAGKFSYSLSASYRRSDGYRYNDPDLRnndgyenTSLNARLGYKLGDNGSLSLSGG 208
|
|
| Plug |
pfam07715 |
TonB-dependent Receptor Plug Domain; The Plug domain has been shown to be an independently ... |
55-162 |
1.71e-27 |
|
TonB-dependent Receptor Plug Domain; The Plug domain has been shown to be an independently folding subunit of the TonB-dependent receptors. It acts as the channel gate, blocking the pore until the channel is bound by ligand. At this point it under goes conformational changes opens the channel.
Pssm-ID: 462243 [Multi-domain] Cd Length: 107 Bit Score: 106.97 E-value: 1.71e-27
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1196389603 55 PDIETPQSVSIITREQFEEQGAISVRQAVSYTPGVYSNQiGASNRFDYIVLRGFSdGSLDNVYLDGLKMMGDTNSHSSL- 133
Cdd:pfam07715 1 DLRDTPGSVSVVTAEDIEDQGATNLADALRGVPGVSVSS-GGGGGGSSISIRGFG-SNRVLVLVDGVPLNSGGGGSVDLn 78
|
90 100
....*....|....*....|....*....
gi 1196389603 134 VVDPWFLENIEVVRGPASVLYGRSSPGGI 162
Cdd:pfam07715 79 SIDPEDIERVEVLKGPASALYGSGAIGGV 107
|
|
| TonB-B12 |
TIGR01779 |
TonB-dependent vitamin B12 receptor; This model represents the TonB-dependent outer membrane ... |
30-702 |
8.13e-27 |
|
TonB-dependent vitamin B12 receptor; This model represents the TonB-dependent outer membrane receptor found in gamma proteobacteria responsible for translocating the cobalt-containing vitamin B12 (cobalamin). [Transport and binding proteins, Other, Transport and binding proteins, Porins]
Pssm-ID: 273802 [Multi-domain] Cd Length: 614 Bit Score: 115.73 E-value: 8.13e-27
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1196389603 30 AQETTKNETIVVTsqmqsgATKIATPDIETPQSVSIITREQFEEQGAISVRQAVSYTPGVYSNQIGASNRFDYIVLRGF- 108
Cdd:TIGR01779 22 ANEAQPLDTVVVT------ANRFAQTASQTLAPVTIITRQDIERTQAKSLPELLRRLPGVSIAQNGGRGQNTSLFLRGTe 95
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1196389603 109 SDGSLdnVYLDGLKMMGDTNSHSSLVVDPW-FLENIEVVRGPASVLYGRSSPGGIVALTSRKPSFDPGGEIKLFAGNNN- 186
Cdd:TIGR01779 96 SDHVL--VLIDGIRFGSAAAGAADFQQLPVeLVERIEYVRGPRSSLYGSEAIGGVINIITRRRSGGQGTTLSAGLGSLDy 173
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1196389603 187 QRGAA-----------FDVTGALDDNDRVAARLSGMTRYADSQFDTLKEQRYAimpSLTWRITDQTRLDLMAYlhrdpeg 255
Cdd:TIGR01779 174 QEYSIasgvaigengwYSVALGTESTKGINVRPGGPGVYDPDRDGFRSDSLLL---GGGHRFDESWSLFVNAL------- 243
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1196389603 256 GSHSGLPYEGTVvphYGKKIANTFFEGEDDYDkydrrenmVGynfEHLFDNGWSVRQKLRYLHTKvELNQVYAAGwlnet 335
Cdd:TIGR01779 244 RYENRNDYDNYS---FGTRLYKEAEKGDQSFT--------GG---RQRQSERDVSELTLSTGKSK-DWDYAYSKG----- 303
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1196389603 336 elnRGYSGSDE-KMNAITLDNQLD-GSVDTWAVnhrlliGIDYQDRS-NDTTGYYGafpaidafnpvygakpdyitmYSR 412
Cdd:TIGR01779 304 ---RYSSTSDTrEQRNIQWQNDLLvGDGWVLAG------GVDWQKDSiISSTADKE---------------------DDR 353
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1196389603 413 ekhklRQTGYYLQDQMSWERWRLTLGGRYDQvsvsnidklNQTRSDLDKNNfstrAALLYLFDNGFAPYISYSTAFTPTS 492
Cdd:TIGR01779 354 -----SNTAAFAQVLQQWGQQLLEASLRRDD---------NQQFGSHTTGS----IAWGYQFIEELRFTASYGTAFKAPN 415
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1196389603 493 FAD----ENGNV-LDPMKGKQWEAGLKYEPEGMNSQFSASVFRINQTnIATKEEPTDPYRSIGEIESKGVELEAISQlTD 567
Cdd:TIGR01779 416 LNQlyypSYGNPnLQPETSKSAELGFYGLFSGGKWSISGYRTKINDL-IDYDSHPKGYPNNIGEARIKGVEATAEFA-TG 493
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1196389603 568 SFRLQAAYTYTDIRYKKSSPEEQgKRAVYAPRNQAsawlsyDVKSGPLD-GLTL-GSGVRYVNGITSDRLNTHTLPSYTL 645
Cdd:TIGR01779 494 GWTHQLSVDLLDAQNVNTGNTLP-RRARQMYKWNA------DRAFEQFDwGASYqYVGKRYDDDYNTYPTQNVRLGGYSL 566
|
650 660 670 680 690
....*....|....*....|....*....|....*....|....*....|....*..
gi 1196389603 646 VDMAIGYDLSkvgiKGLSAQLNVNNLTDKSYVAAcnslsYCYFGAERSIVGSVSWKF 702
Cdd:TIGR01779 567 LDLRVSYYVT----DSWTVQGRIANLFDKDYETA-----YGYPQAGRAYYLSIRYQF 614
|
|
| PRK13483 |
PRK13483 |
ligand-gated channel protein; |
5-702 |
3.25e-18 |
|
ligand-gated channel protein;
Pssm-ID: 184080 [Multi-domain] Cd Length: 660 Bit Score: 89.06 E-value: 3.25e-18
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1196389603 5 MFMFAKTRLALLVGwVTGGVAFPLLAQETTKN--ETIVVTSqmqSGATKIATpdiETPQSVSIITREQFEEQGAISVRQA 82
Cdd:PRK13483 1 MKKYLAQVISALCL-LPAVFVTHALAQAAPDKtmETVVVTA---SGYEQQIR---DAPASISVITREDLENRFYRDLTDA 73
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1196389603 83 VSYTPGVysNQIGASNRFDyIVLRGF-SDGSLdnVYLDGLKMMG---DTNSHSSLVVDPWF-----LENIEVVRGPASVL 153
Cdd:PRK13483 74 LLDVPGV--VVTGGGDRTD-ISLRGMgSQYTL--ILVDGKRQSSretRPNSDGPGVEQAWTpplaaIERIEVIRGPMSSL 148
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1196389603 154 YGRSSPGGIVALTSRKPSFDPGGEIKLFA--------GNNNQrgAAFDVTGALDDnDRVAARLSGMT--RYADSQFDTLK 223
Cdd:PRK13483 149 YGSDAIGGVINIITRKVPNEWQGEVRLDTtlqensdsGNVYQ--ANFFVNGPLIK-DLLGLQLYGQYtqREEDDIEGGYR 225
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1196389603 224 EQRyaiMPSLTWR--ITDQTRLDLMAylhrdpEGGShSGLPYEGTVvphyGKKIANTFFEG--------EDDYDKYDRRE 293
Cdd:PRK13483 226 DKD---ARSLTAKlaLTPNEDHDIML------EVGT-SNQERDSTV----GKTVAPLAPGEscgrrgcpESSTTEYERST 291
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1196389603 294 nmvgYNFEHlfdNG-WSVRQKLRYLHtkvelnqvyaagwlnetelnrgYSGSDEKMNAITLDNQLDGSvdTWAV----NH 368
Cdd:PRK13483 292 ----VSLSH---TGrWDFGTSDTYIQ----------------------HEEFDNKSREMKIKNTDFQS--SLVAplgqEH 340
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1196389603 369 RLLIGIDYQDRS-NDTTGyygafpaidafNPVYGakpdyITMYSRekhklRQTGYYLQDQmsW---ERWRLTLGGRYD-- 442
Cdd:PRK13483 341 TLTFGAAYNHQDlTDETS-----------NQISD-----LTDISR-----TQWAVFSEDE--WriaDDFALTGGLRLDhd 397
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1196389603 443 -----QVSVSNIDKLNQTRSDLDKNNFSTraallylfdnGF-APYISYSTA-FTPTSfadENGNV-----LDPMKGKQWE 510
Cdd:PRK13483 398 enfggHVSPRVYGVWNLAPSWTVKGGVST----------GFrAPSLRQTTPdWGQVS---RGGNIygnpdLKPETSLNKE 464
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1196389603 511 AGLKYEpEGMNSQFSASVF---------RI----NQTNIATKEEPTDP--YRSIGEIESKGVELEAISQLTDSFRLQAAY 575
Cdd:PRK13483 465 LGLYYD-LGSGLTASLTVFynefkdkitRVacpaTQCTDGPNQFGADPttYVNIDEAVTQGVEASLSYPITSTLSLSGNY 543
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1196389603 576 TYTDIRYKksSPEEQGKRAVYAPRNQASAWLSYDvksgPLDGLTLGSGVRY-------VNGITSDRLnthTLPSYTLVDM 648
Cdd:PRK13483 544 TYTDSEQK--SGAYKGSPLNQLPKHLFQASLNWE----PTDRLNSWARVNYrgeesqpTTGPSSSSF---IAPSYTFLDL 614
|
730 740 750 760 770
....*....|....*....|....*....|....*....|....*....|....
gi 1196389603 649 AIGYDLSkvgiKGLSAQLNVNNLTDKSyvaaCNSLSYCYFGAERSIVGSVSWKF 702
Cdd:PRK13483 615 GANYQLT----DNLKLSAGIYNLFDKE----INYEEYGYVEDGRRYWLGMTYSF 660
|
|
| PRK13513 |
PRK13513 |
ligand-gated channel protein; |
5-674 |
4.60e-15 |
|
ligand-gated channel protein;
Pssm-ID: 184104 [Multi-domain] Cd Length: 659 Bit Score: 79.04 E-value: 4.60e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1196389603 5 MFMFAKTRLALLVGWVTGGVAFPLLAQETTKNETIVVTSQmqSG-ATKIAtpdiETPQSVSIITREQFEEQGAISVRQAV 83
Cdd:PRK13513 3 QRFRKTHKAALVIAAAISSQAYAAEKTNTATPTDTMVVTA--SGfQQRIQ----DAPASISVVTREQLENKAYRDVTDAL 76
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1196389603 84 SYTPGVYSNQIGASNRfdyIVLRGFSdGSLDNVYLDGLKMmgDT-----NSHSSLVVDPWF-----LENIEVVRGPASVL 153
Cdd:PRK13513 77 KDVPGVVVTGGGSTSD---ISIRGMA-AKYTLILVDGKRV--DTrstrpNSDGSGIEQGWLpplaaIERIEVVRGPMSSL 150
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1196389603 154 YGRSSPGGIVALTSRKPSFDPGGEIKLFA--------GNNNQRGAAfdVTGALDDNdRVAARLSGMT--RYADSQFDTLK 223
Cdd:PRK13513 151 YGSDAMGGVINIITRKVQKEWHGSLRADAtlqedsksGDIFQTNAY--ASGPLIDG-LLGLKVSGLLshRSEDKIIDGYN 227
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1196389603 224 EQRyaiMPS----LTWRITDQTRLDLMA--YL-HRDPEGG---------------------SHSG----------LPYEG 265
Cdd:PRK13513 228 EQR---MRNgtatFSLTPDDNNEFDFEIgrYVqDRNSTPGrtlalngtnsdtqydrnnyaiTHNGyydfgnstsyIQRDE 304
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1196389603 266 TVVPHYGKKIANTFFEGEDDYDKYDRRENMVG-YNFEHLFDNGwsvrqklrylhtkvelNQVYAAGWLNetELNRgYSGs 344
Cdd:PRK13513 305 TRNPSRQMKSVDTIFNTQTSFLLDDHTLSLGGqYRYEELYDKG----------------NQLPSASDLN--KLTR-WSW- 364
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1196389603 345 dekmnAITLDnqldgsvDTWAVNHRLLI--GIDY-QDR---SNDTTGYYGAFPAIDAFNPVYGAkpdyitmysrekhklr 418
Cdd:PRK13513 365 -----ALFAE-------DEWQMTNDFALtgGIRMdQDQnygTHWTPRLYGVWHLADQWTLKGGV---------------- 416
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1196389603 419 QTGYYLQD-QMSWERW-RLTLGGRYDQVSVSNidklnqtrSDLdKNNFSTRAALLYLFDNGFAPYISYsTAFTpTSFADE 496
Cdd:PRK13513 417 STGYRSPDlRQATDNWgQLTGGGGLPALILGN--------SDL-KPEKSISQEIGILWDNQENLNASV-TLFN-TDFKDK 485
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1196389603 497 NGNVLDPMKGkqweaglkyepegmNSQFSASVFRINQTNIATKEeptdpyrSIGEIESKGVELEAISQLTDSFRLQAAYT 576
Cdd:PRK13513 486 ITEVRNCDTT--------------NTDGQCVFNGINYDFISDRI-------NVDKANMRGVEATFNWDINQAWSLATNYT 544
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1196389603 577 YTDIRYKksSPEEQGKRAVYAPRNQASAWLSYDVksgpLDGLTLGSGVRYvNGITSDRLNTHTL----PSYTLVDMAIGY 652
Cdd:PRK13513 545 FTQSEQK--SGAFAGQPLNQMPKHMANATLNWQT----TEDFATWIRINY-RGKTSEYLNRTSMgsgtPSYTFVDLGASY 617
|
730 740
....*....|....*....|..
gi 1196389603 653 DLSkvgiKGLSAQLNVNNLTDK 674
Cdd:PRK13513 618 QLT----KELRLMGGVYNLLDK 635
|
|
| PRK13524 |
PRK13524 |
FepA family TonB-dependent siderophore receptor; |
11-447 |
4.44e-13 |
|
FepA family TonB-dependent siderophore receptor;
Pssm-ID: 237410 [Multi-domain] Cd Length: 744 Bit Score: 72.75 E-value: 4.44e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1196389603 11 TRLALLVGWVTGGVAFPLLAQETTKNETIVvtsqmQSGATKIATPDIETPQS--VSIITREQFEEQG-AISVRQAVSYTP 87
Cdd:PRK13524 6 HSLALLVNLGIYGVAQAAEAEDAKTDDTPA-----SHEDTIVVTAAEQNLQApgVSTITAEDIRKRPpANDVSEIIRTMP 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1196389603 88 GVysNQIGAS-------NRfdYIVLRGFS--------DG----SLDNVYLdGLK----MMGDTNShsslvVDPWFLENIE 144
Cdd:PRK13524 81 GV--NLTGNStsgqrgnNR--QIDIRGMGpentliliDGkpvsSRNSVRY-GWRgerdTRGDTNW-----VPPEMIERIE 150
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1196389603 145 VVRGPASVLYGRSSPGGIVALTSRKPSFDPGGEIKLF--AGNNNQRGAA----FDVTGALDDNdrVAARLSGmtRYADSQ 218
Cdd:PRK13524 151 VLRGPAAARYGNGAAGGVVNIITKKPTGEWHGSWNTYfnAPEHKAEGATkrtnFSLSGPLGDE--LSFRLYG--NLNKTQ 226
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1196389603 219 FD---------TLKEQRYAIMPS--------------LTWRITDQTRLDLMAylhrdpeGGSHSGLPYEG---------T 266
Cdd:PRK13524 227 ADawdinqghqSARTGSYAGTLPagregvinkdinglLRWDFAPLQSLELEA-------GYSRQGNLYAGdtqntnsdaL 299
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1196389603 267 VVPHYGKKiANTFfegeddydkydRRENmvgYNFEHL--FDNGWSVRQKLRYLHTKvelnqvyaagwlnETELNRGYSG- 343
Cdd:PRK13524 300 VKSLYGKE-TNRM-----------YRQN---YALTHRggWDNGVSTSNYAQYEHTR-------------NSRLPEGLAGg 351
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1196389603 344 -------SDEKMNAITLDN-QLDGSVD---TWAVNHRLLIGIDY-QDRSND------TTGYYGAFPAIDAFNpvygakpd 405
Cdd:PRK13524 352 tegifneKATQFSTIDLDDvMLHSEVNlpfDLLVNQTLTLGTEWnQQRMKDpssntqALTSGGAIPGVSATG-------- 423
|
490 500 510 520
....*....|....*....|....*....|....*....|...
gi 1196389603 406 yitmySREKHKLRQTGYYLQDQMSW-ERWRLTLGGRYDQVSVS 447
Cdd:PRK13524 424 -----RSPYSKAEIFSLFAEDNMELtDSTMLTPGLRFDHHSIV 461
|
|
| PRK10064 |
PRK10064 |
catecholate siderophore receptor CirA; Provisional |
25-674 |
1.86e-10 |
|
catecholate siderophore receptor CirA; Provisional
Pssm-ID: 236646 [Multi-domain] Cd Length: 663 Bit Score: 64.14 E-value: 1.86e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1196389603 25 AFPLLAqETTKNETIVVTsqmqsgATKIATPDIETPQSVSIITREQFEEQGAISVRQAVSYTPGV-YSNQigASNRfdyi 103
Cdd:PRK10064 20 AWPVLA-VDDDGETMVVT------ASAVEQNLKDAPASISVITQEDLQRKPVQNLKDVLKEVPGVqLTNE--GDNR---- 86
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1196389603 104 vlRGFSDGSLDNVY----LDGlKMMGDTNS---HSSLVVDpWF----LENIEVVRGPASVLYGRSSPGGIVALTSRK--- 169
Cdd:PRK10064 87 --KGVSIRGLDSSYtlilIDG-KRVNSRNAvfrHNDFDLN-WIpvdaIERIEVVRGPMSSLYGSDALGGVVNIITKKigq 162
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1196389603 170 ---PSFDPGGEIKLFAGNNNQRGAAFDVTGAL-DDNDRVAARLSGMTRYADSQFDTLKEQryaimPSLTWRITDQTRLDL 245
Cdd:PRK10064 163 kwhGTVTVDTTIQEHRDRGDTYNGQFFTSGPLiDGVLGMKAYGSLAKREKDDPQNSTTTD-----TGETPRIEGFTSRDG 237
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1196389603 246 MAYLHRDPEGGSHSGLPYEgtvvphygkkiantFFEGEDDYDKYDR-RENMVGYNFEHlfdNG-WSV-RQKLRYLHTKVE 322
Cdd:PRK10064 238 NVEFAWTPNQNHDFTAGYG--------------FDRQDRDSDSLDKnRLERQNYSLSH---NGrWDYgNSELKYYGEKVE 300
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1196389603 323 LNqvyaagwlnetelNRGYSGSDEKMNAiTLDNQLDGSVDTWavNHRLLIGIDYQ-DRSNDttgyygafpaidafnpvyg 401
Cdd:PRK10064 301 NK-------------NPGNSSPITSESN-SIDGKYTLPLTAI--NQFLTFGGEWRhDKLSD------------------- 345
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1196389603 402 akPDYITMYSREKHKLRQTGYYLQDQ-MSWERWRLTLGGRYDQvsvsnidklNQTRSDldknNFSTRAALLYLFDNGFAP 480
Cdd:PRK10064 346 --AVNLTGGTSSKTSASQYALFVEDEwRIFEPLALTTGVRMDD---------HETYGD----HWSPRAYLVYNATDTVTV 410
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1196389603 481 YISYSTAFTPTSFADENGN----------------VLDPMKGKQWEAGLKYE-PEGM--NSQFSASVFRIN--------- 532
Cdd:PRK10064 411 KGGWATAFKAPSLLQLSPDwtsnscrgackivgspDLKPETSESWELGLYYMgEEGWleGVESSVTVFRNDvddrisisr 490
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1196389603 533 ----------------QTNIATKEEPTDPYRSIGEIESKGVELEAISQLTDSFRLQAAYTYTDIRYKKSSpeeQGKRAVY 596
Cdd:PRK10064 491 tsdvnaapgyqnfvgfETNGRGRRVPVFRYYNVNKARIQGVETELKIPFNDEWKLSLNYTYNDGRDVSNG---ENKPLSD 567
|
650 660 670 680 690 700 710
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1196389603 597 APRNQASAWLsyDVKSGPLDGLTLGSGVRYVnGITSDRLNTHTLPS-YTLVDMAIGYDLSkvgiKGLSAQLNVNNLTDK 674
Cdd:PRK10064 568 LPFHTANGTL--DWKPLALEDWSFYVSGNYT-GQKRADSATAKTPGgYTIWNTGAAWQVT----KDVKLRAGVLNLGDK 639
|
|
| PRK13486 |
PRK13486 |
TonB-dependent receptor; |
11-676 |
5.47e-10 |
|
TonB-dependent receptor;
Pssm-ID: 139606 [Multi-domain] Cd Length: 696 Bit Score: 62.73 E-value: 5.47e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1196389603 11 TRLALLVGWVTGGVAFPLLAQEttknETIVVTSqmqSGATKIATpdiETPQSVSIITRE-----QFEEQG-------AIS 78
Cdd:PRK13486 4 TTLASVVIPCLGFSASSIAAAE----DVMIVSA---SGYEKKLT---NAAASVSVISQEelqssQYHDLAealrsveGVD 73
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1196389603 79 VRQAVSYTPGVYSNQIGASNRFDYIVLRGFSDGSLDNVYLDGLKMMgDTNSHSSLVVdpwfLENIEVVRGPASVLYGRSS 158
Cdd:PRK13486 74 VESGTGKTGGLEISIRGMPASYTLILIDGVRQGGSSDVTPNGFSAM-NTGFMPPLAA----IERIEVIRGPMSTLYGSDA 148
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1196389603 159 PGGIVALTSRK------PSFDPGGEIKLFAGNNNQRGAAFDVTGALDDnDRVAARLSGMTRY-----ADSQFDT------ 221
Cdd:PRK13486 149 MGGVVNIITRKnadkwlSSVNAGLNLQESNKWGNSSQFNFWSSGPLVD-DSVSLQVRGSTQQrqgssVTSLSDTaatrip 227
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1196389603 222 --LKEQRYAIMPSLTWRITDQTRL--DL----MAYLHRDPEGGSHSGlpyegtvvphygkkiantffeGEDDYDKYDRRE 293
Cdd:PRK13486 228 ypTESQNYNLGARLDWKASEQDVLwfDMdttrQRYDNRDGQLGSLTG---------------------GYDRTLRYERNK 286
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1196389603 294 NMVGYnfEHLFDNG-WsvRQKLRYLHTKVELNQVYAAGwLNETELNRGYSGSDEKMNAITLDNQLdgsVDTWAVNHRLLI 372
Cdd:PRK13486 287 ISAGY--DHTFTFGtW--KSYLNWNETENKGRELVRSV-LKRDKWGLAGQPRELKESNLILNSLL---LTPLGESHLVTV 358
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1196389603 373 GIDYQDRSndttgyygafpaidafnpvygAKPDYITMYSREKHKLRQTGYYLQDQmsW---ERWRLTLGGRYDqvsvsni 449
Cdd:PRK13486 359 GGEFQSSS---------------------MKDGVVLASTGETFRQKSWSVFAEDE--WhltDALALTAGSRYE------- 408
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1196389603 450 dklnqtRSDLDKNNFSTRAALLYLFDNGFAPYISYSTAFTPTSFADENGNV----------------LDPMKGKQWEAGL 513
Cdd:PRK13486 409 ------HHEQFGGHFSPRAYLVWDVADAWTLKGGVTTGYKAPRMGQLHKGIsgvsgqgktnllgnpdLKPEESVSYEAGV 482
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1196389603 514 KYEP-EGMNSQFSA--SVFRiNQTNIATKEEPTDPYRSIGEIESKGVELE-AISQLTDSFRLQAAYTYTdiRYKKSSPEE 589
Cdd:PRK13486 483 YYDNpAGLNANVTGfmTDFS-NKIVSYSINDNTNSYVNSGKARLHGVEFAgTLPLWSEDVTLSLNYTWT--RSEQRDGDN 559
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1196389603 590 QGKRAVYAPRNQASAWLSYDVKsgplDGLTLGSGVRYvNGITSDRLNTHT----------------LPSYTLVDMAIGYD 653
Cdd:PRK13486 560 KGAPLSYTPEHMVNAKLNWQIT----EEVASWLGARY-RGKTPRFTQNYSslsavqkkvydekgeyLKAWTVVDAGLSWK 634
|
730 740
....*....|....*....|...
gi 1196389603 654 LSkvgiKGLSAQLNVNNLTDKSY 676
Cdd:PRK13486 635 MT----DALTLNAAVNNLLNKDY 653
|
|
| PRK13484 |
PRK13484 |
IreA family TonB-dependent siderophore receptor; |
7-675 |
6.22e-10 |
|
IreA family TonB-dependent siderophore receptor;
Pssm-ID: 139605 [Multi-domain] Cd Length: 682 Bit Score: 62.33 E-value: 6.22e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1196389603 7 MFAKTRLALLVGWVTGGVAFPLLAQETTKNETIVVTSqmqSGATKIATpdiETPQSVSIITREQFEEQGAISVRQAVSYT 86
Cdd:PRK13484 1 MKNKYIIAPGIAVMCSAVISSGYASSDKKEDTLVVTA---SGFTQQLR---NAPASVSVITSEQLQKKPVSDLVDAVKDV 74
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1196389603 87 PGVYSNqiGASNRFDyIVLRGFSdGSLDNVYLDGLKMMG-DTNSHSSLVVDPWFL------ENIEVVRGPASVLYGRSSP 159
Cdd:PRK13484 75 EGISIT--GGNEKPD-ISIRGLS-GDYTLILVDGRRQSGrESRPNGSGGFEAGFIppveaiERIEVIRGPMSSLYGSDAI 150
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1196389603 160 GGIVALTSR---KPSFDP----GGEIKLFAGNNNQRGAAFDVTGALDDnDRVAARLSGMTRYAdsqfdtlKEQryaimpS 232
Cdd:PRK13484 151 GGVINIITKpvnNQTWDGvlglGGIIQEHGKFGNSTTNDFYLSGPLIK-DKLGLQLYGGMNYR-------KED------S 216
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1196389603 233 LTWRITDQTRLDLMAYLHRDPEGGShsglpyegTVVPHYGKK-IANTFFEGEdDYDKYDRRENMvgynfehlfdngwsvR 311
Cdd:PRK13484 217 ISQGTPAKDNKNITATLQFTPTESQ--------KFVFEYGKNnQVHTLTPGE-SLDAWTMRGNL---------------K 272
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1196389603 312 QKLRYLHTKVELNQvYAAGWLNETE-LNRGYSGSDEKmnaiTLDNQLDGSVDTWAVNhrlliGIDYQDRSNDTTGyyGAF 390
Cdd:PRK13484 273 QPNSKRETHNSRSH-WVAAWNAQGEiLHPEIAVYQEK----VIREVKSGKKDKYNHW-----DLNYESRKPEITN--TII 340
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1196389603 391 PA-IDAFNP----VYGAKPDYITM----------YSREKHKLRQTGYYLQDQMS-WERWRLTLGGRYDQvsvsnidklnq 454
Cdd:PRK13484 341 DAkVTAFLPenvlTIGGQFQHAELrddsatgkktTETQSVSIKQKAVFIENEYAaTDSLALTGGLRLDN----------- 409
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1196389603 455 trSDLDKNNFSTRAALLYLFDNGFAPYISYSTAFTPTSFAD---------ENGNV-------LDPMKGKQWEAGLKYEPe 518
Cdd:PRK13484 410 --HEIYGSYWNPRLYAVYNLTDNLTLKGGIAKAFRAPSIREvspgfgtltQGGASimygnrdLKPETSVTEEIGIIYSN- 486
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1196389603 519 gmNSQFSASV------FRINQTNIATKEEptDP--------YRSIGEIESKGVELEAISQLTDSFRLQAAYTYTDIRyKK 584
Cdd:PRK13484 487 --DSGFSASAtlfntdFKNKLTSYDIGTK--DPvtglntfiYDNVGEANIRGVELATQIPVYDKWHVSANYTFTDSR-RK 561
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1196389603 585 SSPEE------QGKRAVYAPRNQASAWLSYDVKsgplDGLTLGSGVRYV-NGITSDRLNTHTLP----SYTLVDMAIGYD 653
Cdd:PRK13484 562 SDDESlngkslKGEPLERTPRHAANAKLEWDYT----QDITFYSSLNYTgKQIWAAQRNGAKVPrvrnGFTSMDIGLNYQ 637
|
730 740
....*....|....*....|..
gi 1196389603 654 LSKVGIKGLSaqlnVNNLTDKS 675
Cdd:PRK13484 638 ILPDTLINFA----VLNVTDRK 655
|
|
| btuB |
PRK10641 |
TonB-dependent vitamin B12 receptor BtuB; |
24-676 |
1.87e-08 |
|
TonB-dependent vitamin B12 receptor BtuB;
Pssm-ID: 236730 [Multi-domain] Cd Length: 614 Bit Score: 57.69 E-value: 1.87e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1196389603 24 VAFPLLAQETTKNETIVVTSQMQSGATKIATPdietpqsVSIITREQFEEQGAISVRQAVSYTPGVYSNQIGASNRFDYI 103
Cdd:PRK10641 14 TAFSGWAQDTSPDTLVVTANRFQQPVSTVLAP-------TTVVTRDDIDRWQSKSVNDVLRRLPGVDIAQNGGLGQLSSL 86
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1196389603 104 VLRGfSDGSLDNVYLDGLKM--MGDTNSHS------SLVvdpwflENIEVVRGPASVLYGRSSPGGIV-ALTSRKpsfDP 174
Cdd:PRK10641 87 FIRG-TNSSHVLVLIDGVRLnqAGISGSADlsqipiSLV------QRIEYIRGPRSAVYGSDAIGGVVnIITTRD---KP 156
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1196389603 175 GGEIKLFAGNNNqrgaafdvtgalddndrvaarlsgmtrYadsqfdtlkeQRYAImpSLTWRITDQTRLDLMAylhrdpe 254
Cdd:PRK10641 157 GTTLSAGWGSNG---------------------------Y----------QNYDG--STQQQLGDNTRVTLAG------- 190
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1196389603 255 ggshsglPYEGT----VVPHYgkkiaNTFFEGEDDYDKYdrRENMVGYNFEHLFDNGWS--VRqklrylhtkvelnqvyA 328
Cdd:PRK10641 191 -------DYTYTkgfdVVAYG-----NTGTQAQPDRDGF--MSKTLWGGLEHQFNDQWSgfVR----------------G 240
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1196389603 329 AGWLNETELNRGYSGSDEKMNAITLDNQldgsvdTWAVNHRLLIGI-------DYQdRSND-----TTGYYGAFPAIDAF 396
Cdd:PRK10641 241 YGYDNRTDYDAYYSPGSPLIDTRQLYSQ------SWDAGLRYNGGIyssqliaSYS-HSKDynydpHYGRYDSSATLDDM 313
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1196389603 397 NPVY--------------GAKPDYI-------TMYSREKHKLRQTGYYL--QDQMSwerwRLTLGGrydqvSVsnidkln 453
Cdd:PRK10641 314 KQYNvqwgntvqvghgniSAGVDWQkqtttpgTGYVPDGYDQRNTGIYLtgQQQIG----DVTLEG-----AA------- 377
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1196389603 454 qtRSDlDKNNF---ST-RAALLYLFDNGFAPYISYSTAF-TPT------SFADENgnvLDPMKGKQWEAGLKYEPEGMNS 522
Cdd:PRK10641 378 --RSD-DNSQFgwhGTwQTSAGWEFIDGYRFIASYGTAFkAPNlgqlygFYGNPN---LKPEESKQWEGGFEGLTGPVNW 451
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1196389603 523 QFSAsvFRINQTNIATKEEPTDPYRSIGEIESKGVELEAiSQLTDSFRLQAAYTYTDIRykkssPEEQGKRAVYAPRNQA 602
Cdd:PRK10641 452 RLSG--YRNDIDNLIDYDDHTLKYYNVGKATIKGVEWTG-NFDTGPLTHQVTLDYVDPR-----NAITDEPLARRAKQQV 523
|
650 660 670 680 690 700 710
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1196389603 603 SAWLSYDVKsgPLD-GLT---LGSgvRYVNGITSDRLNTHTLPSYTLVDMAIGYDL-SKVGIKGLSAqlnvnNLTDKSY 676
Cdd:PRK10641 524 KYQLDWQLY--DFDwGVTyqyLGT--RYDKDYSTYPYQTVKLGGVSLWDLAVSYPVtSHLTVRGKIA-----NLFDKDY 593
|
|
| PRK13528 |
PRK13528 |
outer membrane receptor FepA; Provisional |
125-210 |
3.00e-05 |
|
outer membrane receptor FepA; Provisional
Pssm-ID: 237413 [Multi-domain] Cd Length: 727 Bit Score: 47.44 E-value: 3.00e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1196389603 125 GDTNShsslvVDPWFLENIEVVRGPASVLYGRSSPGGIVALTSRKPSFDPGGEIKLFAGN------NNQRGAAFDVTGAL 198
Cdd:PRK13528 134 GDTNW-----VPPEMVERIEVIRGPAAARYGSGAAGGVVNIITKRPTNDWHGSLSLYTNQpesskeGATRRANFSLSGPL 208
|
90
....*....|..
gi 1196389603 199 dDNDRVAARLSG 210
Cdd:PRK13528 209 -AGDALTMRLYG 219
|
|
| MtrB_PioB |
pfam11854 |
Putative outer membrane beta-barrel porin, MtrB/PioB; MtrB-PioB is a family of bacterial ... |
357-581 |
4.02e-03 |
|
Putative outer membrane beta-barrel porin, MtrB/PioB; MtrB-PioB is a family of bacterial putative outer membrane porins. This family, is secreted as part of the pio (phototrophic iron oxidation) operon that has been found to couple the oxidation of ferrous iron [Fe(II)] to reductive CO2 fixation using light energy. PioABC is found in Rhodopseudomonas palustris and MtrB-PioB is likely to be a beta-barrel porin. Similar to other outer membrane porins, PioB and MtrB are predicted to have long loops protruding into the extracellular space and short turns on the periplasmic side.
Pssm-ID: 432132 [Multi-domain] Cd Length: 632 Bit Score: 40.40 E-value: 4.02e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1196389603 357 LDGSVDTWAVNH----------RLLIGIDYQDRSNDTTgyYGAFPAIDaFNPVYGaKPDYITMYSREKHKLR-QTGYYLQ 425
Cdd:pfam11854 272 LDGEVDTLLANLkltsrltpdlRLTASYDYYDRDNRTP--VLEYPQSS-TTGVTG-GTRRNTPYDFTRQKAKlAADYRLA 347
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1196389603 426 dqmswERWRLTLGGRYDQVSVSNIDKlNQTRSD-----LDKNNFST---RAALLYLFDNGfAPYISYSTAFTPTSFADEN 497
Cdd:pfam11854 348 -----RGYKLEAGYDYEQDDRSYQDR-EETDENtvwarLRVRPFDNltlRLKGSYSNRDG-SDYQGSENTSSESNALLRK 420
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1196389603 498 GNVLDpMKGKQWEAGLKYEP-EGMNSQFSAsvfrinqtniatkEEPTDPY--RSIG--EIESKGVELEAISQLTDSFRLQ 572
Cdd:pfam11854 421 YYLAD-RDRTKARLRLNYQPiEDLSLGLTA-------------RYANDDYdeTDIGltESEDYGYDLDANYQLSEGLSLY 486
|
....*....
gi 1196389603 573 AAYTYTDIR 581
Cdd:pfam11854 487 AFYSQQWID 495
|
|
| |
