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Conserved domains on  [gi|1197928497|ref|WP_086845804|]
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APC family permease [Amycolatopsis kentuckyensis]

Protein Classification

APC family permease( domain architecture ID 11425014)

APC (amino acid/polyamine/organocation) family permease is involved in the uptake of a specific amino acid and/or polyamine substrate with the concomitant import of a proton

Gene Ontology:  GO:0016020|GO:0055085|GO:0022857|GO:0015171|GO:0006865
PubMed:  23177982|24038584|25043943|10931886
SCOP:  4006243
TCDB:  2.A.3.1|2.A.3

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
PotE COG0531
Serine transporter YbeC, amino acid:H+ symporter family [Amino acid transport and metabolism];
7-449 3.82e-67

Serine transporter YbeC, amino acid:H+ symporter family [Amino acid transport and metabolism];


:

Pssm-ID: 440297 [Multi-domain]  Cd Length: 438  Bit Score: 221.69  E-value: 3.82e-67
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1197928497   7 SGEPPALERRIGPLQATAINMTQMCGIGPFVTiPAMVATMGGPQAMFGWIIGAIVALADGLIWAELGAAMPGAGGTYLYL 86
Cdd:COG0531     3 RGESSELKRKLGLFDLVALGVGAIIGAGIFVL-PGLAAGLAGPAAILAWLIAGLLALLVALSYAELASAFPRAGGAYTYA 81

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1197928497  87 REAFqyrtGRLMPFLFVWSAVLFIPLIMSTGIIGLVQYLGYLIPGVTDdagttplgKIIGIGITLVIVLALFRKIGQISQ 166
Cdd:COG0531    82 RRAL----GPLLGFLAGWALLLSYVLAVAAVAVAFGGYLSSLFPAGGS--------VLIALVLILLLTLLNLRGVKESAK 149

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1197928497 167 LTTVLFVIMLVAVLATIVAAFSHFSAAQAFAFTPGAFSSFGGGtfwgglgAGLIIAIYDYLGYNTSAYLGGEVRTPGRTL 246
Cdd:COG0531   150 VNNILTVLKLLVLLLFIVVGLFAFDPANFTPFLPAGGGLSGVL-------AALALAFFAFTGFEAIANLAEEAKNPKRNI 222

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1197928497 247 PRSIIFSILGIMGLYFLLQVGVLGSIPLDQLKEAKSVASSVLEQVWGTGTAKAITVLIVIAAIGSVFAGLLGGSRVPFEA 326
Cdd:COG0531   223 PRAIILSLLIVGVLYILVSLALTGVVPYDELAASGAPLADAAEAVFGPWGAILIALGALLSLLGALNASILGASRLLYAM 302

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1197928497 327 ARDKVFLPVFGKLHPKLNLPTAGVLTMGAITIIGSLFT---LTTVINAAVATLVIIQSLAQVAAIvVLRRRQPNLRRPYR 403
Cdd:COG0531   303 ARDGLLPKVFAKVHPRFGTPVNAILLTGVIALLLLLLGaasFTALASLASVGVLLAYLLVALAVI-VLRRRRPDLPRPFR 381

                         410       420       430       440
                  ....*....|....*....|....*....|....*....|....*.
gi 1197928497 404 QWLyPVPTIIALIGWVYIYKSAEWLSIGLSLGWIAIGAVAYLVYAK 449
Cdd:COG0531   382 VPL-PLIPILGILLCLFLLYLLGPGALLIGLVLLAIGLLLYLLYRR 426
 
Name Accession Description Interval E-value
PotE COG0531
Serine transporter YbeC, amino acid:H+ symporter family [Amino acid transport and metabolism];
7-449 3.82e-67

Serine transporter YbeC, amino acid:H+ symporter family [Amino acid transport and metabolism];


Pssm-ID: 440297 [Multi-domain]  Cd Length: 438  Bit Score: 221.69  E-value: 3.82e-67
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1197928497   7 SGEPPALERRIGPLQATAINMTQMCGIGPFVTiPAMVATMGGPQAMFGWIIGAIVALADGLIWAELGAAMPGAGGTYLYL 86
Cdd:COG0531     3 RGESSELKRKLGLFDLVALGVGAIIGAGIFVL-PGLAAGLAGPAAILAWLIAGLLALLVALSYAELASAFPRAGGAYTYA 81

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1197928497  87 REAFqyrtGRLMPFLFVWSAVLFIPLIMSTGIIGLVQYLGYLIPGVTDdagttplgKIIGIGITLVIVLALFRKIGQISQ 166
Cdd:COG0531    82 RRAL----GPLLGFLAGWALLLSYVLAVAAVAVAFGGYLSSLFPAGGS--------VLIALVLILLLTLLNLRGVKESAK 149

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1197928497 167 LTTVLFVIMLVAVLATIVAAFSHFSAAQAFAFTPGAFSSFGGGtfwgglgAGLIIAIYDYLGYNTSAYLGGEVRTPGRTL 246
Cdd:COG0531   150 VNNILTVLKLLVLLLFIVVGLFAFDPANFTPFLPAGGGLSGVL-------AALALAFFAFTGFEAIANLAEEAKNPKRNI 222

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1197928497 247 PRSIIFSILGIMGLYFLLQVGVLGSIPLDQLKEAKSVASSVLEQVWGTGTAKAITVLIVIAAIGSVFAGLLGGSRVPFEA 326
Cdd:COG0531   223 PRAIILSLLIVGVLYILVSLALTGVVPYDELAASGAPLADAAEAVFGPWGAILIALGALLSLLGALNASILGASRLLYAM 302

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1197928497 327 ARDKVFLPVFGKLHPKLNLPTAGVLTMGAITIIGSLFT---LTTVINAAVATLVIIQSLAQVAAIvVLRRRQPNLRRPYR 403
Cdd:COG0531   303 ARDGLLPKVFAKVHPRFGTPVNAILLTGVIALLLLLLGaasFTALASLASVGVLLAYLLVALAVI-VLRRRRPDLPRPFR 381

                         410       420       430       440
                  ....*....|....*....|....*....|....*....|....*.
gi 1197928497 404 QWLyPVPTIIALIGWVYIYKSAEWLSIGLSLGWIAIGAVAYLVYAK 449
Cdd:COG0531   382 VPL-PLIPILGILLCLFLLYLLGPGALLIGLVLLAIGLLLYLLYRR 426
AA_permease_2 pfam13520
Amino acid permease;
17-406 1.81e-29

Amino acid permease;


Pssm-ID: 404414 [Multi-domain]  Cd Length: 427  Bit Score: 119.72  E-value: 1.81e-29
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1197928497  17 IGPLQATAINMTQMCGIGPFVTipAMVATMGGPQAMFGWIIGAIVALADGLIWAELGAAMPGAGGTYLYLREAFqyrtGR 96
Cdd:pfam13520   1 LGLLSAFALVIGSVIGSGIFVA--PLVASGGPALIVWGWIAAIIFSLAVGLVYAELSSALPRSGGIYVYLENAF----GK 74

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1197928497  97 LMPFLFVWSAVLFIPLIMSTGIIGLVQYLGYLIPGVTDdaGTTPLGKIIGIGITLVIVLALFRKIGQISQLTTVLFVIML 176
Cdd:pfam13520  75 FVAFLAGWSNWFAYVLGLASSASVAASYLLSALGPDLV--PTTWLTYGIAIAILIIFAIINIRGVRESAKIQNILGILKL 152

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1197928497 177 VAVLATIVAAFSHFSAAQAFAFTPGAFSSFgGGTFWGGLGAGLIIAIYDYLGYNTSAYLGGEVrtPGRTLPRSIIFSILG 256
Cdd:pfam13520 153 LLPLILIIILGLVTADGGGFNLLSGEWHTF-FPDGWPGVFAGFLGVLWSFTGFESAANVSEEV--KKRNVPKAIFIGVII 229

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1197928497 257 IMGLYFLLQVGVLGSIPLDQLKEAK---SVASSVLEQVWGTGTAKAITVLIVIAAIGSVFAGLLGGSRVPFEAARDKV-- 331
Cdd:pfam13520 230 VGVLYILVNIAFFGVVPDDEIALSSglgQVAALLFQAVGGKWGAIIVVILLALSLLGAVNTAIVGASRLLYALARDGVlp 309

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1197928497 332 FLPVFGKLHpKLNLPTAGVLTMGAITIIGSLFTL------TTVINAAVATLVIIQSLAQVAAiVVLRRRQPNLRRPYRQW 405
Cdd:pfam13520 310 FSRFFAKVN-KFGSPIRAIILTAILSLILLLLFLlspaayNALLSLSAYGYLLSYLLPIIGL-LILRKKRPDLGRIPGRW 387


                  .
gi 1197928497 406 L 406
Cdd:pfam13520 388 P 388
frlA PRK11357
amino acid permease;
13-449 2.01e-28

amino acid permease;


Pssm-ID: 183096 [Multi-domain]  Cd Length: 445  Bit Score: 116.88  E-value: 2.01e-28
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1197928497  13 LERRIGPLQATAINMTQMCGIGPFVTIPAMVATMGGPQ-AMFGWIIGAIVALADGLIWAELGAAMPGAGGTYLYLREAfq 91
Cdd:PRK11357    6 LQRKLGFWAVLAIAVGTTVGSGIFVSVGEVAKAAGTPWlTVLAFVIGGLIVIPQMCVYAELSTAYPENGADYVYLKNA-- 83

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1197928497  92 yrTGRLMPFLFVWSAVLFI-PLIMSTGIIGLVQYLGYLIPGvtddagTTPLGKIIGIGITLVIVLALFRKIGQISQLTTV 170
Cdd:PRK11357   84 --GSRPLAFLSGWASFWANdAPSLSIMALAIVSNLGFLTPI------DPLLGKFIAAGLIIAFMLLHLRSVEGGAAFQTL 155

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1197928497 171 LFVIMLVAVLATIVAAFSHFSAAQafaFTPGAFSSFGGGTFWGGLGAGLIIAIYDYLGYNTSAYLGGEVRTPGRTLPRSI 250
Cdd:PRK11357  156 ITIAKIIPFTIVIGLGIFWFKAEN---FAAPTTTAIGATGSFMALLAGISATSWSYTGMASICYMTGEIKNPGKTMPRAL 232

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1197928497 251 IFSILGIMGLYFLLQVGVLGSIPLDQLKEAKSVASSVLEQVWGTGTAKAITVLI--VIAAIGSVFAGLLGGSRVPFEAAR 328
Cdd:PRK11357  233 IGSCLLVLVLYTLLALVISGLMPFDKLANSETPISDALTWIPALGSTAGIFVAItaMIVILGSLSSCVMYQPRLEYAMAK 312

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1197928497 329 DKVFLPVFGKLHPKLNLPTAGVLTMGAITIIGSLFTLTTVINAAVATLVIIQSLAQVAAIVVLRRR---QPNLRRPYRQW 405
Cdd:PRK11357  313 DNLFFKCFGHVHPKYNTPDVSIILQGALGIFFIFVSDLTSLLGYFTLVMCFKNTLTFGSIIWCRKRddyKPLWRTPAFGL 392

                         410       420       430       440
                  ....*....|....*....|....*....|....*....|....
gi 1197928497 406 LYPVPTIIALIGWVYIYKSAEWLSIGLSLGWIAIGAVAYLVYAK 449
Cdd:PRK11357  393 MTTLAIASSLILVASTFVWAPIPGLICAVIVIATGLPAYAFWAK 436
2A0308 TIGR00911
L-type amino acid transporter; [Transport and binding proteins, Amino acids, peptides and ...
 7-439 2.38e-28

L-type amino acid transporter; [Transport and binding proteins, Amino acids, peptides and amines]


Pssm-ID: 273332 [Multi-domain]  Cd Length: 501  Bit Score: 117.54  E-value: 2.38e-28
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1197928497   7 SGEPPALERRIGPLQATAINMTQMCGIGPFVTIPAMVATMGGP-QAMFGWIIGAIVALADGLIWAELGAAMPGAGGTYLY 85
Cdd:TIGR00911  34 GGEAVALKKEITLLSGVGIIVGTIIGSGIFVSPKGVLKNAGSVgLALIMWAVCGIFSIVGALVYAELGTTIPKSGGEYNY 113

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1197928497  86 LREAFqyrtGRLMPFLFVWSAVLFIPLiMSTGIIGLVQYLGYLIPGVTDDAGTTPLGKIIG-IGITLVIVLALFR-KIGq 163
Cdd:TIGR00911 114 ILEVF----GPLLAFLRLWIELLVIRP-GSQAVNALNFAIYILTPVFPDCEVPEWAIRLVAvLCVLLLTLVNCLSvKWA- 187

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1197928497 164 iSQLTTVLFVIMLVAVLATIVAAFSHFSAAQAFAFTP-GAFSSFGGGTFWGGLgaGLIIAIYDYLGYNTSAYLGGEVRTP 242
Cdd:TIGR00911 188 -TRVQDIFTACKLLALLLIIITGWVQLGKGGVESLNPkNAFEGTETSAGGIVL--AFYSGIWAYGGWNYLNFVTEEVKNP 264

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1197928497 243 GRTLPRSIIFSILGIMGLYFLLQVGVLGSIPLDQLKEAKSVASSVLEQVWGTgTAKAITVLIVIAAIGSVFAGLLGGSRV 322
Cdd:TIGR00911 265 YRTLPIAIIISMPIVTFIYVLTNIAYFTVLSPEELLASLAVAVDFGERLLGV-MSWAMPALVGLSCFGSVNGSLFSSSRL 343

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1197928497 323 PFEAARDKVFLPVFGKLHPKLNLPTAGVLTMGAITIIGSLFT-LTTVINAAVATLVIIQSLAqVAAIVVLRRRQPNLRRP 401
Cdd:TIGR00911 344 FFVGGREGHLPSLLSMIHVKRLTPLPSLLIVCTLTLLMLFSGdIYSLINLISFANWLFNALA-VAGLLWLRYKRPEMNRP 422

                         410       420       430
                  ....*....|....*....|....*....|....*....
gi 1197928497 402 YRQWLYpvPTIIALIGWVYIYKSAEWL-SIGLSLGWIAI 439
Cdd:TIGR00911 423 IKVPLF--FPVFFLLSCLFLIILSLYSpPVGCGVGFIIM 459
 
Name Accession Description Interval E-value
PotE COG0531
Serine transporter YbeC, amino acid:H+ symporter family [Amino acid transport and metabolism];
7-449 3.82e-67

Serine transporter YbeC, amino acid:H+ symporter family [Amino acid transport and metabolism];


Pssm-ID: 440297 [Multi-domain]  Cd Length: 438  Bit Score: 221.69  E-value: 3.82e-67
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1197928497   7 SGEPPALERRIGPLQATAINMTQMCGIGPFVTiPAMVATMGGPQAMFGWIIGAIVALADGLIWAELGAAMPGAGGTYLYL 86
Cdd:COG0531     3 RGESSELKRKLGLFDLVALGVGAIIGAGIFVL-PGLAAGLAGPAAILAWLIAGLLALLVALSYAELASAFPRAGGAYTYA 81

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1197928497  87 REAFqyrtGRLMPFLFVWSAVLFIPLIMSTGIIGLVQYLGYLIPGVTDdagttplgKIIGIGITLVIVLALFRKIGQISQ 166
Cdd:COG0531    82 RRAL----GPLLGFLAGWALLLSYVLAVAAVAVAFGGYLSSLFPAGGS--------VLIALVLILLLTLLNLRGVKESAK 149

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1197928497 167 LTTVLFVIMLVAVLATIVAAFSHFSAAQAFAFTPGAFSSFGGGtfwgglgAGLIIAIYDYLGYNTSAYLGGEVRTPGRTL 246
Cdd:COG0531   150 VNNILTVLKLLVLLLFIVVGLFAFDPANFTPFLPAGGGLSGVL-------AALALAFFAFTGFEAIANLAEEAKNPKRNI 222

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1197928497 247 PRSIIFSILGIMGLYFLLQVGVLGSIPLDQLKEAKSVASSVLEQVWGTGTAKAITVLIVIAAIGSVFAGLLGGSRVPFEA 326
Cdd:COG0531   223 PRAIILSLLIVGVLYILVSLALTGVVPYDELAASGAPLADAAEAVFGPWGAILIALGALLSLLGALNASILGASRLLYAM 302

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1197928497 327 ARDKVFLPVFGKLHPKLNLPTAGVLTMGAITIIGSLFT---LTTVINAAVATLVIIQSLAQVAAIvVLRRRQPNLRRPYR 403
Cdd:COG0531   303 ARDGLLPKVFAKVHPRFGTPVNAILLTGVIALLLLLLGaasFTALASLASVGVLLAYLLVALAVI-VLRRRRPDLPRPFR 381

                         410       420       430       440
                  ....*....|....*....|....*....|....*....|....*.
gi 1197928497 404 QWLyPVPTIIALIGWVYIYKSAEWLSIGLSLGWIAIGAVAYLVYAK 449
Cdd:COG0531   382 VPL-PLIPILGILLCLFLLYLLGPGALLIGLVLLAIGLLLYLLYRR 426
AA_permease_2 pfam13520
Amino acid permease;
17-406 1.81e-29

Amino acid permease;


Pssm-ID: 404414 [Multi-domain]  Cd Length: 427  Bit Score: 119.72  E-value: 1.81e-29
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1197928497  17 IGPLQATAINMTQMCGIGPFVTipAMVATMGGPQAMFGWIIGAIVALADGLIWAELGAAMPGAGGTYLYLREAFqyrtGR 96
Cdd:pfam13520   1 LGLLSAFALVIGSVIGSGIFVA--PLVASGGPALIVWGWIAAIIFSLAVGLVYAELSSALPRSGGIYVYLENAF----GK 74

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1197928497  97 LMPFLFVWSAVLFIPLIMSTGIIGLVQYLGYLIPGVTDdaGTTPLGKIIGIGITLVIVLALFRKIGQISQLTTVLFVIML 176
Cdd:pfam13520  75 FVAFLAGWSNWFAYVLGLASSASVAASYLLSALGPDLV--PTTWLTYGIAIAILIIFAIINIRGVRESAKIQNILGILKL 152

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1197928497 177 VAVLATIVAAFSHFSAAQAFAFTPGAFSSFgGGTFWGGLGAGLIIAIYDYLGYNTSAYLGGEVrtPGRTLPRSIIFSILG 256
Cdd:pfam13520 153 LLPLILIIILGLVTADGGGFNLLSGEWHTF-FPDGWPGVFAGFLGVLWSFTGFESAANVSEEV--KKRNVPKAIFIGVII 229

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1197928497 257 IMGLYFLLQVGVLGSIPLDQLKEAK---SVASSVLEQVWGTGTAKAITVLIVIAAIGSVFAGLLGGSRVPFEAARDKV-- 331
Cdd:pfam13520 230 VGVLYILVNIAFFGVVPDDEIALSSglgQVAALLFQAVGGKWGAIIVVILLALSLLGAVNTAIVGASRLLYALARDGVlp 309

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1197928497 332 FLPVFGKLHpKLNLPTAGVLTMGAITIIGSLFTL------TTVINAAVATLVIIQSLAQVAAiVVLRRRQPNLRRPYRQW 405
Cdd:pfam13520 310 FSRFFAKVN-KFGSPIRAIILTAILSLILLLLFLlspaayNALLSLSAYGYLLSYLLPIIGL-LILRKKRPDLGRIPGRW 387


                  .
gi 1197928497 406 L 406
Cdd:pfam13520 388 P 388
frlA PRK11357
amino acid permease;
13-449 2.01e-28

amino acid permease;


Pssm-ID: 183096 [Multi-domain]  Cd Length: 445  Bit Score: 116.88  E-value: 2.01e-28
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1197928497  13 LERRIGPLQATAINMTQMCGIGPFVTIPAMVATMGGPQ-AMFGWIIGAIVALADGLIWAELGAAMPGAGGTYLYLREAfq 91
Cdd:PRK11357    6 LQRKLGFWAVLAIAVGTTVGSGIFVSVGEVAKAAGTPWlTVLAFVIGGLIVIPQMCVYAELSTAYPENGADYVYLKNA-- 83

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1197928497  92 yrTGRLMPFLFVWSAVLFI-PLIMSTGIIGLVQYLGYLIPGvtddagTTPLGKIIGIGITLVIVLALFRKIGQISQLTTV 170
Cdd:PRK11357   84 --GSRPLAFLSGWASFWANdAPSLSIMALAIVSNLGFLTPI------DPLLGKFIAAGLIIAFMLLHLRSVEGGAAFQTL 155

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1197928497 171 LFVIMLVAVLATIVAAFSHFSAAQafaFTPGAFSSFGGGTFWGGLGAGLIIAIYDYLGYNTSAYLGGEVRTPGRTLPRSI 250
Cdd:PRK11357  156 ITIAKIIPFTIVIGLGIFWFKAEN---FAAPTTTAIGATGSFMALLAGISATSWSYTGMASICYMTGEIKNPGKTMPRAL 232

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1197928497 251 IFSILGIMGLYFLLQVGVLGSIPLDQLKEAKSVASSVLEQVWGTGTAKAITVLI--VIAAIGSVFAGLLGGSRVPFEAAR 328
Cdd:PRK11357  233 IGSCLLVLVLYTLLALVISGLMPFDKLANSETPISDALTWIPALGSTAGIFVAItaMIVILGSLSSCVMYQPRLEYAMAK 312

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1197928497 329 DKVFLPVFGKLHPKLNLPTAGVLTMGAITIIGSLFTLTTVINAAVATLVIIQSLAQVAAIVVLRRR---QPNLRRPYRQW 405
Cdd:PRK11357  313 DNLFFKCFGHVHPKYNTPDVSIILQGALGIFFIFVSDLTSLLGYFTLVMCFKNTLTFGSIIWCRKRddyKPLWRTPAFGL 392

                         410       420       430       440
                  ....*....|....*....|....*....|....*....|....
gi 1197928497 406 LYPVPTIIALIGWVYIYKSAEWLSIGLSLGWIAIGAVAYLVYAK 449
Cdd:PRK11357  393 MTTLAIASSLILVASTFVWAPIPGLICAVIVIATGLPAYAFWAK 436
2A0308 TIGR00911
L-type amino acid transporter; [Transport and binding proteins, Amino acids, peptides and ...
 7-439 2.38e-28

L-type amino acid transporter; [Transport and binding proteins, Amino acids, peptides and amines]


Pssm-ID: 273332 [Multi-domain]  Cd Length: 501  Bit Score: 117.54  E-value: 2.38e-28
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1197928497   7 SGEPPALERRIGPLQATAINMTQMCGIGPFVTIPAMVATMGGP-QAMFGWIIGAIVALADGLIWAELGAAMPGAGGTYLY 85
Cdd:TIGR00911  34 GGEAVALKKEITLLSGVGIIVGTIIGSGIFVSPKGVLKNAGSVgLALIMWAVCGIFSIVGALVYAELGTTIPKSGGEYNY 113

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1197928497  86 LREAFqyrtGRLMPFLFVWSAVLFIPLiMSTGIIGLVQYLGYLIPGVTDDAGTTPLGKIIG-IGITLVIVLALFR-KIGq 163
Cdd:TIGR00911 114 ILEVF----GPLLAFLRLWIELLVIRP-GSQAVNALNFAIYILTPVFPDCEVPEWAIRLVAvLCVLLLTLVNCLSvKWA- 187

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1197928497 164 iSQLTTVLFVIMLVAVLATIVAAFSHFSAAQAFAFTP-GAFSSFGGGTFWGGLgaGLIIAIYDYLGYNTSAYLGGEVRTP 242
Cdd:TIGR00911 188 -TRVQDIFTACKLLALLLIIITGWVQLGKGGVESLNPkNAFEGTETSAGGIVL--AFYSGIWAYGGWNYLNFVTEEVKNP 264

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1197928497 243 GRTLPRSIIFSILGIMGLYFLLQVGVLGSIPLDQLKEAKSVASSVLEQVWGTgTAKAITVLIVIAAIGSVFAGLLGGSRV 322
Cdd:TIGR00911 265 YRTLPIAIIISMPIVTFIYVLTNIAYFTVLSPEELLASLAVAVDFGERLLGV-MSWAMPALVGLSCFGSVNGSLFSSSRL 343

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1197928497 323 PFEAARDKVFLPVFGKLHPKLNLPTAGVLTMGAITIIGSLFT-LTTVINAAVATLVIIQSLAqVAAIVVLRRRQPNLRRP 401
Cdd:TIGR00911 344 FFVGGREGHLPSLLSMIHVKRLTPLPSLLIVCTLTLLMLFSGdIYSLINLISFANWLFNALA-VAGLLWLRYKRPEMNRP 422

                         410       420       430
                  ....*....|....*....|....*....|....*....
gi 1197928497 402 YRQWLYpvPTIIALIGWVYIYKSAEWL-SIGLSLGWIAI 439
Cdd:TIGR00911 423 IKVPLF--FPVFFLLSCLFLIILSLYSpPVGCGVGFIIM 459
2A0303 TIGR00906
cationic amino acid transport permease; [Transport and binding proteins, Amino acids, peptides ...
 24-398 1.32e-17

cationic amino acid transport permease; [Transport and binding proteins, Amino acids, peptides and amines]


Pssm-ID: 273330 [Multi-domain]  Cd Length: 557  Bit Score: 85.25  E-value: 1.32e-17
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1197928497  24 AINMTQMCGIGPFVTIPAMVATMGGPQAMFGWIIGAIVALADGLIWAELGAAMPGAGGTYLYLReafqYRTGRLMPFLFV 103
Cdd:TIGR00906  37 ALGIGSTIGAGIYVLTGEVARNDSGPAIVLSFLISGLAAVLSGFCYAEFGARVPKAGSAYLYSY----VTVGELWAFITG 112

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1197928497 104 WSAVL----------------FIPLIMSTGIIGLVQYLGYLIPGVTDDAGTTPLGKIIGIGITLVIVL---ALFRKIGQI 164
Cdd:TIGR00906 113 WNLILeyvigtaavarswsayFDELLNKQIGQFRRTYFKLNYDGLAEYPDFFAVCLILLLAVLLSFGVkesAWVNKIFTA 192

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1197928497 165 SQLTTVLFVIMLVAVLATiVAAFSHFSAAQAFAFTPGAFSSfgggtfwggLGAGLIIAIYDYLGYNTSAYLGGEVRTPGR 244
Cdd:TIGR00906 193 INILVLLFVIIAGFTKAD-VANWSITEEKGAGGFMPYGFTG---------VLSGAATCFFAFIGFDAIATTGEEVKNPQR 262

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1197928497 245 TLPRSIIFSILGIMGLYFLLQVGVLGSIPLDQLKEaKSVASSVLEQVwGTGTAKAITVLIVIAAIG-SVFAGLLGGSRVP 323
Cdd:TIGR00906 263 AIPIGIVTSLLVCFVAYFLMSAALTLMMPYYLLDP-DAPFPVAFEYV-GWDPAKYIVAVGALCGMStSLLGGMFPLPRVI 340

                         330       340       350       360       370       380       390
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1197928497 324 FEAARDKVFLPVFGKLHPKLNLPTAGVLTMGAIT-IIGSLFTLTTVINAAVATLVIIQSLaqVAAIVVLRRRQPNL 398
Cdd:TIGR00906 341 YAMARDGLLFKWLAQINSKTKTPINATVVSGAIAaLMAFLFDLKALVDLLSIGTLLAYSL--VAACVLILRYQPGL 414
PRK10644 PRK10644
arginine/agmatine antiporter;
15-389 7.94e-14

arginine/agmatine antiporter;


Pssm-ID: 182613 [Multi-domain]  Cd Length: 445  Bit Score: 73.29  E-value: 7.94e-14
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1197928497  15 RRIGPLQATAINMTQMCGIGPFVtIPAMVATMGGPqAMFGWIIGAIVALADGLIWAELGAAMPGAGGTYLYLREAFQyrt 94
Cdd:PRK10644    8 HKVGLIPVTLMVAGNIMGSGVFL-LPANLASTGGI-AIYGWLVTIIGALGLSMVYAKMSSLDPSPGGSYAYARRCFG--- 82

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1197928497  95 grlmPFLFVWSAVLFIpLIMSTGIIGL----VQYLGYLIPGVTDdagttPLGKIIGIgITLVIVLALFRKIGQ--ISQLT 168
Cdd:PRK10644   83 ----PFLGYQTNVLYW-LACWIGNIAMvvigVGYLSYFFPILKD-----PLVLTITC-VVVLWIFVLLNIVGPkmITRVQ 151

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1197928497 169 TVLFVIMLVAVLATIVAAFSHFSAAQAF-AFTPGAFSSFgggtfwGGLGAGLIIAIYDYLGYNTSAYLGGEVRTPGRTLP 247
Cdd:PRK10644  152 AVATVLALIPIVGIAVFGWFWFRGETYMaAWNVSGLGTF------GAIQSTLNVTLWSFIGVESASVAAGVVKNPKRNVP 225

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1197928497 248 RSIIFSILGIMGLYFLLQVGVLGSIPLDQLKEAKSVASSVLEQVWGTGTAKAITVLIVIAAIGSVFAGLLGGSRVPFEAA 327
Cdd:PRK10644  226 IATIGGVLIAAVCYVLSSTAIMGMIPNAALRVSASPFGDAARMALGDTAGAIVSFCAAAGCLGSLGGWTLLAGQTAKAAA 305

                         330       340       350       360       370       380
                  ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1197928497 328 RDKVFLPVFGKLHpKLNLPTAGVLTMGAITiigSLFTLTTVINAAVATLVIIQSLAQVAAIV 389
Cdd:PRK10644  306 DDGLFPPIFARVN-KAGTPVAGLLIVGVLM---TIFQLSSISPNASKEFGLVSSVSVIFTLV 363
AA_permease pfam00324
Amino acid permease;
25-416 2.05e-13

Amino acid permease;


Pssm-ID: 366028 [Multi-domain]  Cd Length: 467  Bit Score: 71.97  E-value: 2.05e-13
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1197928497  25 INMTQMCGIGPFVTIPAMVATMGGPQAMFGWIIGAIVALADGLIWAELGAAMPGAGGTYLYLREAFQYRTGRLMPFLFVW 104
Cdd:pfam00324   5 IALGGVIGTGLFVGSGSVLGQAGPAGALLGYLISGVVIFLVMLSLGEISTNGPVSGGFYTYASRFLGPSLGFATGWNYWL 84

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1197928497 105 SAVLFIPLIMSTGIIgLVQYLGYlIPGVTDDAGTTplgkIIGIGITLVIVLALFRKIGQISQLTTVLFVIMLVAVLatIV 184
Cdd:pfam00324  85 SWITVLALELTAASI-LIQFWEL-VPDIPYLWVWG----AVFLVLLTIINLVGVKWYGEAEFWFALIKIIAIIGFI--IV 156

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1197928497 185 AAFSHFSAAQAFA-----FTPGAFSSFGGGTFWGGLGAGLIIAIYDYLGYNTSAYLGGEVRTPGRTLPRSIIFSILGIMG 259
Cdd:pfam00324 157 GIILLSGGNPNDGaifryLGDNGGKNNFPPGFGKGFISVFVIAFFAFTGIELVGIAAGEVKNPEKSIPKAILQVIWRITI 236

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1197928497 260 LY--FLLQVGVLGSIPLDQLKEAKSVASS----VLEQVWGTGTAKAITVLIVIAAIGSVFAGLLGGSRVPFEAARDKVFl 333
Cdd:pfam00324 237 FYilSLLAIGLLVPWNDPGLLNDSASAASpfviFFKFLGISGLAPLINAVILTAALSAANSSLYSGSRMLYSLARDGLA- 315

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1197928497 334 PVFGKLHPKLNLPTAGVL-------------TMGAITIIGSLFTLTTVINAAVATLVIIQSLAQVAAIVVLRRRQPNLrr 400
Cdd:pfam00324 316 PKFLKKVDKRGVPLRAILvsmvisllalllaSLNPAIVFNFLLAISGLSGLIVWGLISLSHLRFRKAFKYQGRSIDEL-- 393

                         410
                  ....*....|....*.
gi 1197928497 401 PYRQWLYPVPTIIALI 416
Cdd:pfam00324 394 PFKAPLGPLGVILGLA 409
2A0304 TIGR00907
amino acid permease (GABA permease); [Transport and binding proteins, Amino acids, peptides ...
 47-446 2.53e-13

amino acid permease (GABA permease); [Transport and binding proteins, Amino acids, peptides and amines]


Pssm-ID: 273331 [Multi-domain]  Cd Length: 482  Bit Score: 71.70  E-value: 2.53e-13
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1197928497  47 GGPQAMFGWIIGAIVALADGLIWAELGAAMPGAGGTYLYLREAFQYRTGRLMPFLFVWSAVLFIPLIMSTGIIGLVQYLG 126
Cdd:TIGR00907  45 GAMSIVWGWIIAGAGSICIALSLAELSSAYPTSGGQYFWSAKLAPPRQMPFASWMTGWFNLAGQVAGTASTDLSVAQLIL 124

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1197928497 127 YLIPGVTDDAGTTPLG-KIIGIGITLVIVLALFRKIGQ-----ISQLTTVLFVIMLVAVLATIVAAFSHFSAAQAFAFTP 200
Cdd:TIGR00907 125 GIVSLTTPGREYIPTRwHIFGIMIGIHLIHALINSLPTkwlprITSSAAYWSLLGFLTICITLLACKSPKFNDGKFVFTN 204

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1197928497 201 GAFSSFGGGTFWGGLGAGLIIAIYDYLGYNTSAYLGGEVRTPGRTLPRSII--FSILGIMGLYFLLQVG-VLGSIPLDQL 277
Cdd:TIGR00907 205 FNNSTGGWKPGGFAFLLGLLNPAWSMTGYDGTAHMAEEIENPEVVGPRAIIgaVAIGIVTGFCFNIVLFfSMGDIDSLIS 284

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1197928497 278 KEAKSVASSVLEQVWGTGT-AKAITVLIVIAAIGSVFAGLLGGSRVPFEAARDKV--FLPVFGKLHPKLNLPTAGVLTMG 354
Cdd:TIGR00907 285 STTGQPIAQIFYNALGNKAgAIFLLCLILVTSFFCAITCMTANSRMIYAFSRDGGlpFSPLWSRVNPRTQVPLNAVWLSA 364

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1197928497 355 AITIIGSLFTLttvinaavATLVIIQSLAQVAAIVVLrrrqpnlrrpyrqWLYPVPTIIALIGWVYIYKSAEWL--SIGL 432
Cdd:TIGR00907 365 VWIILIGLLGL--------GSSTAFQAIFSVCTVALD-------------VSYVIPIICKLAKGRNTIAPGPFWlgKYGF 423

                         410
                  ....*....|....
gi 1197928497 433 SLGWIAIGAVAYLV 446
Cdd:TIGR00907 424 FVNAVAVAWTVFSS 437
potE PRK10655
putrescine transporter; Provisional
 15-444 5.58e-11

putrescine transporter; Provisional


Pssm-ID: 182622  Cd Length: 438  Bit Score: 64.28  E-value: 5.58e-11
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1197928497  15 RRIGPLQATAINMTQMCGIGpFVTIPAMVATMGGpQAMFGWIIGAIVALADGLIWAELGAAMPGAGGTYLYLREAFQyRT 94
Cdd:PRK10655    6 NKMGVVQLTILTAVNMMGSG-IIMLPTKLAQVGT-ISILSWLVTAVGSMALAYAFAKCGMFSRKSGGMGGYAEYAFG-KS 82

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1197928497  95 GRLMPFlFVWSAVLfipLIMSTGI-IGLVQYLGYLIPgvtddAGTTPLGkiIGIGITLVIVLALF------RKIGQISQL 167
Cdd:PRK10655   83 GNFMAN-YTYGVSL---LIANVAIaISAVGYGTELFG-----ATLSPVQ--ICLATIGVLWLCTVanfggaRITGQISSV 151

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1197928497 168 tTVLFVIMLVAVLATIVAAFSHFSAAQAfAFTPGAFSSFgggtfwGGLGAGLIIAIYDYLGYNTSAYLGGEVRTPGRTLP 247
Cdd:PRK10655  152 -TVWGVIIPVVGLSIIGWFWFSPSLYVA-AWNPHHLPFF------SAVGSSIAMTLWAFLGLESACANSDAVENPERNVP 223

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1197928497 248 RSIIFSILGIMGLYFLLQVGVLGSIPLDQLKEAKSVASSVLEQVWGTGTAKAITVLIVIAAIGSVFAGLLGGSRVPFEAA 327
Cdd:PRK10655  224 IAVLGGTLGAAVIYIVSTNVIAGIVPNMELANSTAPFGLAFAQMFNPTVGKIVMALMVMSCCGSLLGWQFTIAQVFKSSA 303

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1197928497 328 RDKVFLPVFGKLHpKLNLPTAGVLTMGAITIIGSLFTL--------TTVINAAVATLVIIQSLAQVAAIVVLRRRQPNLR 399
Cdd:PRK10655  304 DEGYFPKIFSRVT-KVDAPVQGMLIIVVIQSLLSLMTIspslnsqfNVLVNLAVVTNIIPYILSMAALVIIQKVANVPPS 382

                         410       420       430       440       450
                  ....*....|....*....|....*....|....*....|....*....|...
gi 1197928497 400 RpyrqwlYPVPTIIALIGWVY----IYKSAE----WLSIGLSLGWIAIGAVAY 444
Cdd:PRK10655  383 K------AKVANFIAFVGALYsfyaLYSSGEeamlYGSIVTFLGWTLYGLISP 429
cadB PRK10435
cadaverine/lysine antiporter;
15-374 2.41e-07

cadaverine/lysine antiporter;


Pssm-ID: 182458  Cd Length: 435  Bit Score: 52.83  E-value: 2.41e-07
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1197928497  15 RRIGPLQATAINMTQMCGIGpFVTIPAMVATMGGpQAMFGWIIGAIVALADGLIWAELGAAMPGAGGTYLYLRE---AFQ 91
Cdd:PRK10435    5 KKIGLFACTGVVAGNMMGSG-IALLPANLASIGS-IAIWGWIISIIGAMSLAYVYARLATKNPQQGGPIAYAGEispAFG 82

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1197928497  92 YRTGRLMpFLFVWSAVLFIplimstGIIGlVQYLGYLIPGVTDDagttplgkiIGIGITLVIVLALFRKIGQ-----ISQ 166
Cdd:PRK10435   83 FQTGVLY-YHANWIGNLAI------GITA-VSYLSTFFPVLNDP---------IPAGIACIAIVWVFTFVNMlggtwVSR 145

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1197928497 167 LTTVLFVIMLVAVLATIVAAFSHFSAA--QAFAFTPGAFSSfgggtfwGGLGAGLIIAIYDYLGYNTSAYLGGEVRTPGR 244
Cdd:PRK10435  146 LTTIGLVLVLIPVVGTAIVGWHWFDAAtyAANWNTSDTTDG-------HAIIKSILLCLWAFVGVESAAVSTGMVKNPKR 218

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1197928497 245 TLPRSIIFSIlGIMGLYFLLQVGVL-GSIPLDQLKEAK---SVASSVLEQVWGTGTAKAITVLIVIAAIGSvFAGLLGGS 320
Cdd:PRK10435  219 TVPLATMLGT-GLAGIIYIAATQVIsGMFPASVMAASGapfAISASTILGNWAAPLVSAFTAFACLTSLGS-WMMLVGQA 296

                         330       340       350       360       370
                  ....*....|....*....|....*....|....*....|....*....|....
gi 1197928497 321 RVpfEAARDKVFLPVFGKLHpKLNLPTAGVLTmgAITIIGSLFTLTTVINAAVA 374
Cdd:PRK10435  297 GV--RAANDGNFPKVYGEVD-KNGIPKKGLLL--AAVKMTALMILITLMNSSGG 345
PRK11021 PRK11021
putative transporter; Provisional
 17-394 2.52e-07

putative transporter; Provisional


Pssm-ID: 236823 [Multi-domain]  Cd Length: 410  Bit Score: 52.60  E-value: 2.52e-07
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1197928497  17 IGPLQATAINMTQMCGIGPFVtIPAMVATMGGPQAMFGWIIGAIVALADGLIWAELGAAMPGAGGTYLYLREAFQYRTGR 96
Cdd:PRK11021    1 LGLWQGIGLLSTSLLGTGVFA-VPALAALVAGNNSLWAWPLLILLIFPIAIVFARLGRHFPHAGGPAHFVGMAFGPRLGR 79

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1197928497  97 LMPFLFvwsaVLFIPLIMSTGIIGLVQYLGYLIPGvtddAGTTPLGkiIGIGITLVIVLALFRKIGQISQLTTVLfVIML 176
Cdd:PRK11021   80 VTGWLF----LSVIPVGLPAALQIAAGFGQALFGW----SSWQLLL--AELLTLALLWLLNLRGASSSANLQTVI-ALLI 148

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1197928497 177 VAVLATIVAAfSHFSAAQAFAFTPGAFSsfgggtfWGGLGAGLIIAIYDYLGYNTSAYLGGEVRTPGRTLPRSIIFSILG 256
Cdd:PRK11021  149 VALVVAIWWA-GDIKPADIPFPAPGSIE-------WSGLFAALGVMFWCFVGIEAFAHLASEFKNPERDFPRALMIGLLL 220

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1197928497 257 IMGLYFLLQVGVLgSIPLDQLKEAKSVA-SSVLEQVWGTGTAKAITVLIVIAAIGSVFAGLLGGSRVPFEAARDKVFLPV 335
Cdd:PRK11021  221 AGLVYWACTVVVL-HFPAYGDKQAAAASlPGIFVQLFGGYALWVICVIGYLACFASVNIYTQSFARLVWSQAREGRPPSY 299

                         330       340       350       360       370       380
                  ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1197928497 336 FGKLHPK---LNLPTAGVLTMGAITIIGSLFT--LTTVINAAVATLVIIQSLAQVAAIVVLRRR 394
Cdd:PRK11021  300 LARLSARgvpVNALNAVLGCCAVSILLIYALGlnLEALIAYANGIFVLIYLLCMLAACKLLKGR 363
LysP COG0833
Amino acid permease [Amino acid transport and metabolism];
32-416 1.51e-03

Amino acid permease [Amino acid transport and metabolism];


Pssm-ID: 440595 [Multi-domain]  Cd Length: 467  Bit Score: 40.92  E-value: 1.51e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1197928497  32 GIGPFVTIPAMVATMGGPQAMFGWIIGAIVALADGLIWAELGAAMPGAG--GTY--LYLREAFQYRTGRLmpFLFVWSAV 107
Cdd:COG0833    29 GTGLFLASGYTISQAGPGGALLAYLLGGLMVYFLMTSLGELAVAMPVSGsfQTYatRFIDPAFGFAVGWN--YWLNWAIT 106

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1197928497 108 LFIPLIMStGIIglvqyLGYLIPGVtddagttPLGKIIGIGITLVIVLALF--RKIGQ-------ISQLTTVLFVIMLVA 178
Cdd:COG0833   107 VAAELTAA-GII-----MQYWFPDV-------PVWIWSLLFLALIFLLNALsvKAFGEsefwfslIKVITVIAFIIVGLL 173

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1197928497 179 VLATIV----AAFSHFSAAQAFAftPGAFSSFGGGtfwgglgagLIIAIYDYLGYNTSAYLGGEVRTPGRTLPRSIIFSI 254
Cdd:COG0833   174 MIFGIIgghaPGFSNFTTGDGPF--PGGFLAILGV---------MMIVGFSFQGTELIGIAAGESENPEKTIPKAIRQVF 242

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1197928497 255 LGIMgLYFLLQVGVLGS-IPLDQLKEAKSVASSVLEQVWGTGTAKAITVLIVIAAIGSVFAGLLGGSRVPFEAARDKVFL 333
Cdd:COG0833   243 WRIL-LFYILAIFVIAAlIPYTDAGVAESPFTLVFERAGIPYAADIMNAVILTAVLSAGNSGLYASTRMLWSLAKEGMAP 321

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1197928497 334 PVFGKLHPKlNLPTAGVLtmgAITIIGSLFTLTTVINAAVATLVIIQSLAQVAAIVVL-------RRRQPNLRR------ 400
Cdd:COG0833   322 KIFAKLNKR-GVPLNALL---ATMAVGLLALLSSFFGAGTVYLWLLSISGLTGFIAWLgiaishyRFRRAYVAQggdled 397

                         410
                  ....*....|....*..
gi 1197928497 401 -PYRQWLYPVPTIIALI 416
Cdd:COG0833   398 lKYKAPLFPFGPIFAFI 414
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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