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Conserved domains on  [gi|1207618472|ref|WP_087984131|]
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MULTISPECIES: DUF3923 family protein [Bacillus]

Protein Classification

DUF3923 family protein( domain architecture ID 10586654)

DUF3923 family protein

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
DUF3923 pfam13061
Protein of unknown function (DUF3923); This family of proteins is functionally uncharacterized. ...
 5-68 2.74e-11

Protein of unknown function (DUF3923); This family of proteins is functionally uncharacterized. This family of proteins is found in bacteria. Proteins in this family are approximately 80 amino acids in length.


:

Pssm-ID: 404063  Cd Length: 65  Bit Score: 53.10  E-value: 2.74e-11
                         10        20        30        40        50        60
                 ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1207618472  5 WIYWWIGNIFWIITFGILAAIIWLREVDGTGVTQTPELKLIAFIVLLIAFILPLIIQVVWLLVN 68
Cdd:pfam13061  1 KKLWWISNIFWILLFVIGALFIWTRKVDGAGVVQTPELKLISLLVLLIAFVFILIFQLIWLIIL 64
 
Name Accession Description Interval E-value
DUF3923 pfam13061
Protein of unknown function (DUF3923); This family of proteins is functionally uncharacterized. ...
 5-68 2.74e-11

Protein of unknown function (DUF3923); This family of proteins is functionally uncharacterized. This family of proteins is found in bacteria. Proteins in this family are approximately 80 amino acids in length.


Pssm-ID: 404063  Cd Length: 65  Bit Score: 53.10  E-value: 2.74e-11
                         10        20        30        40        50        60
                 ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1207618472  5 WIYWWIGNIFWIITFGILAAIIWLREVDGTGVTQTPELKLIAFIVLLIAFILPLIIQVVWLLVN 68
Cdd:pfam13061  1 KKLWWISNIFWILLFVIGALFIWTRKVDGAGVVQTPELKLISLLVLLIAFVFILIFQLIWLIIL 64
 
Name Accession Description Interval E-value
DUF3923 pfam13061
Protein of unknown function (DUF3923); This family of proteins is functionally uncharacterized. ...
 5-68 2.74e-11

Protein of unknown function (DUF3923); This family of proteins is functionally uncharacterized. This family of proteins is found in bacteria. Proteins in this family are approximately 80 amino acids in length.


Pssm-ID: 404063  Cd Length: 65  Bit Score: 53.10  E-value: 2.74e-11
                         10        20        30        40        50        60
                 ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1207618472  5 WIYWWIGNIFWIITFGILAAIIWLREVDGTGVTQTPELKLIAFIVLLIAFILPLIIQVVWLLVN 68
Cdd:pfam13061  1 KKLWWISNIFWILLFVIGALFIWTRKVDGAGVVQTPELKLISLLVLLIAFVFILIFQLIWLIIL 64
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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