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Conserved domains on  [gi|1207657724|ref|WP_088019287|]
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DUF1540 domain-containing protein [Sutcliffiella horikoshii]

Protein Classification

DUF1540 domain-containing protein( domain architecture ID 10540893)

DUF1540 domain-containing protein similar to Bacillus subtilis YtzL

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
DUF1540 pfam07561
Domain of Unknown Function (DUF1540); This family has four conserved cysteines, which is ...
 5-47 1.98e-08

Domain of Unknown Function (DUF1540); This family has four conserved cysteines, which is suggestive of a metal binding function.


:

Pssm-ID: 462209  Cd Length: 40  Bit Score: 44.07  E-value: 1.98e-08
                         10        20        30        40
                 ....*....|....*....|....*....|....*....|...
gi 1207657724  5 VLCEVENCNYWGQGNLCQADAIYVvshKGNTAYDSKDTDCKTF 47
Cdd:pfam07561  1 IKCTVTNCKYNEEGNKCTAEEIQV---HGSNATSSDETDCATF 40
 
Name Accession Description Interval E-value
DUF1540 pfam07561
Domain of Unknown Function (DUF1540); This family has four conserved cysteines, which is ...
 5-47 1.98e-08

Domain of Unknown Function (DUF1540); This family has four conserved cysteines, which is suggestive of a metal binding function.


Pssm-ID: 462209  Cd Length: 40  Bit Score: 44.07  E-value: 1.98e-08
                         10        20        30        40
                 ....*....|....*....|....*....|....*....|...
gi 1207657724  5 VLCEVENCNYWGQGNLCQADAIYVvshKGNTAYDSKDTDCKTF 47
Cdd:pfam07561  1 IKCTVTNCKYNEEGNKCTAEEIQV---HGSNATSSDETDCATF 40
 
Name Accession Description Interval E-value
DUF1540 pfam07561
Domain of Unknown Function (DUF1540); This family has four conserved cysteines, which is ...
 5-47 1.98e-08

Domain of Unknown Function (DUF1540); This family has four conserved cysteines, which is suggestive of a metal binding function.


Pssm-ID: 462209  Cd Length: 40  Bit Score: 44.07  E-value: 1.98e-08
                         10        20        30        40
                 ....*....|....*....|....*....|....*....|...
gi 1207657724  5 VLCEVENCNYWGQGNLCQADAIYVvshKGNTAYDSKDTDCKTF 47
Cdd:pfam07561  1 IKCTVTNCKYNEEGNKCTAEEIQV---HGSNATSSDETDCATF 40
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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