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Conserved domains on  [gi|1207668172|ref|WP_088029000|]
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MULTISPECIES: Ig-like domain-containing protein [Bacillus cereus group]

Protein Classification

Ig domain-containing protein( domain architecture ID 11475235)

Ig-like domain-containing protein similar to Escherichia virus Lambda tail tube protein

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
YjdB COG5492
Uncharacterized conserved protein YjdB, contains Ig-like domain [General function prediction ...
 33-126 1.64e-09

Uncharacterized conserved protein YjdB, contains Ig-like domain [General function prediction only];


:

Pssm-ID: 444243 [Multi-domain]  Cd Length: 613  Bit Score: 54.31  E-value: 1.64e-09
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1207668172  33 ITIAPSVISVIGVHMEKNKLKVRTGQSTELSASVLPVQATNTELIWTNMNADVITMYPKGdtvTITGKSAGRAVVIVTTA 112
Cdd:COG5492   336 VATTVDVVPVTGVTLNPTSVTLAVGQTLTLTATVTPANATNKNVTWSSSDPSVATVDSNG---LVTAVAAGTATITATTK 412

                          90
                  ....*....|....
gi 1207668172 113 EGKFRDLCMIHVQP 126
Cdd:COG5492   413 DGGKTATCTVTVTA 426
 
Name Accession Description Interval E-value
YjdB COG5492
Uncharacterized conserved protein YjdB, contains Ig-like domain [General function prediction ...
 33-126 1.64e-09

Uncharacterized conserved protein YjdB, contains Ig-like domain [General function prediction only];


Pssm-ID: 444243 [Multi-domain]  Cd Length: 613  Bit Score: 54.31  E-value: 1.64e-09
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1207668172  33 ITIAPSVISVIGVHMEKNKLKVRTGQSTELSASVLPVQATNTELIWTNMNADVITMYPKGdtvTITGKSAGRAVVIVTTA 112
Cdd:COG5492   336 VATTVDVVPVTGVTLNPTSVTLAVGQTLTLTATVTPANATNKNVTWSSSDPSVATVDSNG---LVTAVAAGTATITATTK 412

                          90
                  ....*....|....
gi 1207668172 113 EGKFRDLCMIHVQP 126
Cdd:COG5492   413 DGGKTATCTVTVTA 426
 
Name Accession Description Interval E-value
YjdB COG5492
Uncharacterized conserved protein YjdB, contains Ig-like domain [General function prediction ...
 33-126 1.64e-09

Uncharacterized conserved protein YjdB, contains Ig-like domain [General function prediction only];


Pssm-ID: 444243 [Multi-domain]  Cd Length: 613  Bit Score: 54.31  E-value: 1.64e-09
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1207668172  33 ITIAPSVISVIGVHMEKNKLKVRTGQSTELSASVLPVQATNTELIWTNMNADVITMYPKGdtvTITGKSAGRAVVIVTTA 112
Cdd:COG5492   336 VATTVDVVPVTGVTLNPTSVTLAVGQTLTLTATVTPANATNKNVTWSSSDPSVATVDSNG---LVTAVAAGTATITATTK 412

                          90
                  ....*....|....
gi 1207668172 113 EGKFRDLCMIHVQP 126
Cdd:COG5492   413 DGGKTATCTVTVTA 426
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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