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Conserved domains on  [gi|1207686807|ref|WP_088046465|]
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MULTISPECIES: NAD(P)/FAD-dependent oxidoreductase [Bacillus]

Protein Classification

flavin-containing monooxygenase( domain architecture ID 11449697)

flavin-containing monooxygenase (FMO) catalyses the flavin-dependent oxidation of ketones and cyclic ketones to esters and lactones, by using molecular oxygen and NAD(P)H.

CATH:  3.50.50.60
Gene Ontology:  GO:0016709|GO:0004497|GO:0050660
PubMed:  20015679|33588053

Graphical summary

 Zoom to residue level

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List of domain hits

Name Accession Description Interval E-value
CzcO COG2072
Predicted flavoprotein CzcO associated with the cation diffusion facilitator CzcD [Inorganic ...
1-346 1.47e-85

Predicted flavoprotein CzcO associated with the cation diffusion facilitator CzcD [Inorganic ion transport and metabolism];


:

Pssm-ID: 441675 [Multi-domain]  Cd Length: 414  Bit Score: 264.42  E-value: 1.47e-85
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1207686807   1 MKDLIIIGAGQAGLTMGYYLKQEGYNFLLLEAGKQVGDSWR-NRYDSLQLFTSRSYSSLPGMTLIGEKNEFPYKDEIATY 79
Cdd:COG2072     6 HVDVVVIGAGQAGLAAAYHLRRAGIDFVVLEKADDVGGTWRdNRYPGLRLDTPSHLYSLPFFPNWSDDPDFPTGDEILAY 85
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1207686807  80 LEEYAKHFQL--PVQLQTEVLKI--KKEKEIFELHTPT-EILQTKKVIIASGAFQQPFIPSVSANLSSHIFQIHSSQYKS 154
Cdd:COG2072    86 LEAYADKFGLrrPIRFGTEVTSArwDEADGRWTVTTDDgETLTARFVVVATGPLSRPKIPDIPGLEDFAGEQLHSADWRN 165
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1207686807 155 PSQIPKGKVLVVGGGNSGMQIAVELAKTHE-VTVSISHPLTFLPLQLFGKSIFNLLEKVGL-LYAEINTKRGRWFQKRK- 231
Cdd:COG2072   166 PVDLAGKRVLVVGTGASAVQIAPELARVAAhVTVFQRTPPWVLPRPNYDPERGRPANYLGLeAPPALNRRDARAWLRRLl 245
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1207686807 232 ------------DPIFGFEGK---------KLIRNGAIKL-QEKVVSASGNNIMFQNGDIYSAESVIWSTGFVQNYNWIE 289
Cdd:COG2072   246 raqvkdpelgllTPDYPPGCKrpllstdyyEALRRGNVELvTGGIERITEDGVVFADGTEHEVDVIVWATGFRADLPWLA 325
                         330       340       350       360       370       380
                  ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1207686807 290 IEQAVNEKGF--PNHIKGI--SPVKGLYYIGLPWQSqRGSALICGVGKDAAYVLSEIKKID 346
Cdd:COG2072   326 PLDVRGRDGRsgPRAYLGVvvPGFPNLFFLGPNSPS-GHSSLTLGAERQARYIARLIAHMR 385
 
Name Accession Description Interval E-value
CzcO COG2072
Predicted flavoprotein CzcO associated with the cation diffusion facilitator CzcD [Inorganic ...
1-346 1.47e-85

Predicted flavoprotein CzcO associated with the cation diffusion facilitator CzcD [Inorganic ion transport and metabolism];


Pssm-ID: 441675 [Multi-domain]  Cd Length: 414  Bit Score: 264.42  E-value: 1.47e-85
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1207686807   1 MKDLIIIGAGQAGLTMGYYLKQEGYNFLLLEAGKQVGDSWR-NRYDSLQLFTSRSYSSLPGMTLIGEKNEFPYKDEIATY 79
Cdd:COG2072     6 HVDVVVIGAGQAGLAAAYHLRRAGIDFVVLEKADDVGGTWRdNRYPGLRLDTPSHLYSLPFFPNWSDDPDFPTGDEILAY 85
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1207686807  80 LEEYAKHFQL--PVQLQTEVLKI--KKEKEIFELHTPT-EILQTKKVIIASGAFQQPFIPSVSANLSSHIFQIHSSQYKS 154
Cdd:COG2072    86 LEAYADKFGLrrPIRFGTEVTSArwDEADGRWTVTTDDgETLTARFVVVATGPLSRPKIPDIPGLEDFAGEQLHSADWRN 165
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1207686807 155 PSQIPKGKVLVVGGGNSGMQIAVELAKTHE-VTVSISHPLTFLPLQLFGKSIFNLLEKVGL-LYAEINTKRGRWFQKRK- 231
Cdd:COG2072   166 PVDLAGKRVLVVGTGASAVQIAPELARVAAhVTVFQRTPPWVLPRPNYDPERGRPANYLGLeAPPALNRRDARAWLRRLl 245
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1207686807 232 ------------DPIFGFEGK---------KLIRNGAIKL-QEKVVSASGNNIMFQNGDIYSAESVIWSTGFVQNYNWIE 289
Cdd:COG2072   246 raqvkdpelgllTPDYPPGCKrpllstdyyEALRRGNVELvTGGIERITEDGVVFADGTEHEVDVIVWATGFRADLPWLA 325
                         330       340       350       360       370       380
                  ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1207686807 290 IEQAVNEKGF--PNHIKGI--SPVKGLYYIGLPWQSqRGSALICGVGKDAAYVLSEIKKID 346
Cdd:COG2072   326 PLDVRGRDGRsgPRAYLGVvvPGFPNLFFLGPNSPS-GHSSLTLGAERQARYIARLIAHMR 385
Pyr_redox_3 pfam13738
Pyridine nucleotide-disulphide oxidoreductase;
12-253 2.07e-40

Pyridine nucleotide-disulphide oxidoreductase;


Pssm-ID: 404603 [Multi-domain]  Cd Length: 296  Bit Score: 143.90  E-value: 2.07e-40
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1207686807  12 AGLTMGYYLKQEG-YNFLLLEAGkQVGDSWRNRYDSLQLFTSrSYSS----LPGMTLI--------GEKNEFPYKDEIAT 78
Cdd:pfam13738   2 AGIGCAIALKKAGlEDYLILEKG-NIGNSFYRYPTHMTFFSP-SFTSngfgIPDLNAIspgtspafTFNREHPSGNEYAE 79
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1207686807  79 YLEEYAKHFQLPVQLQTEVLKIKKEKEIFELHTPTEILQTKKVIIASGAFQQPFIPSVSANlsshifQIHSSQYKSPSQI 158
Cdd:pfam13738  80 YLRRVADHFELPINLFEEVTSVKKEDDGFVVTTSKGTYQARYVIIATGEFDFPNKLGVPEL------PKHYSYVKDFHPY 153
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1207686807 159 PKGKVLVVGGGNSGMQIAVELAKT-HEVTVSISHPLTF--------------------LPLQLFGKSIFN----LLEKVG 213
Cdd:pfam13738 154 AGQKVVVIGGYNSAVDAALELVRKgARVTVLYRGSEWEdrdsdpsyslspdtlnrleeLVKNGKIKAHFNaevkEITEVD 233
                         250       260       270       280
                  ....*....|....*....|....*....|....*....|...
gi 1207686807 214 LLYaEINTKRGRWFQKRKDPIF--GFE-GKKLIRNGAIKLQEK 253
Cdd:pfam13738 234 VSY-KVHTEDGRKVTSNDDPILatGYHpDLSFLKKGLFELDED 275
PLN02172 PLN02172
flavin-containing monooxygenase FMO GS-OX
2-319 1.50e-15

flavin-containing monooxygenase FMO GS-OX


Pssm-ID: 215116 [Multi-domain]  Cd Length: 461  Bit Score: 77.21  E-value: 1.50e-15
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1207686807   2 KDLIIIGAGQAGLTMGYYLKQEGYNFLLLEAGKQVGDSW----RNRYDSLQLFTSRS------YSSL------------- 58
Cdd:PLN02172   11 QHVAVIGAGAAGLVAARELRREGHTVVVFEREKQVGGLWvytpKSESDPLSLDPTRSivhssvYESLrtnlprecmgyrd 90
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1207686807  59 -PGMTLIGEKN----EFPYKDEIATYLEEYAKHFQLP--VQLQTEVLKIKKEKEIFELHTPT-------EILQTkkVIIA 124
Cdd:PLN02172   91 fPFVPRFDDESrdsrRYPSHREVLAYLQDFAREFKIEemVRFETEVVRVEPVDGKWRVQSKNsggfskdEIFDA--VVVC 168
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1207686807 125 SGAFQQPFIPSVSANLSSHIFQIHSSQYKSPSQIPKGKVLVVGGGNSGMQIAVELAK-THEVTVS--ISHPLTFLPLQLF 201
Cdd:PLN02172  169 NGHYTEPNVAHIPGIKSWPGKQIHSHNYRVPDPFKNEVVVVIGNFASGADISRDIAKvAKEVHIAsrASESDTYEKLPVP 248
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1207686807 202 GKSIFnllekvglLYAEINTkrgrwfqkrkdpifgfegkklirngaiklqekvvSASGNNIMFQNGDIYSAESVIWSTGF 281
Cdd:PLN02172  249 QNNLW--------MHSEIDT----------------------------------AHEDGSIVFKNGKVVYADTIVHCTGY 286
                         330       340       350       360
                  ....*....|....*....|....*....|....*....|...
gi 1207686807 282 VQNYNWIEIE--QAVNEKGFPNHIKGISP---VKGLYYIGLPW 319
Cdd:PLN02172  287 KYHFPFLETNgyMRIDENRVEPLYKHVFPpalAPGLSFIGLPA 329
soxA_mon TIGR01377
sarcosine oxidase, monomeric form; Sarcosine oxidase catalyzes the oxidative demethylation of ...
3-143 2.07e-04

sarcosine oxidase, monomeric form; Sarcosine oxidase catalyzes the oxidative demethylation of sarcosine to glycine. The reaction converts tetrahydrofolate to 5,10-methylene-tetrahydrofolate. The enzyme is known in monomeric and heterotetrameric (alpha,beta,gamma,delta) forms [Energy metabolism, Amino acids and amines]


Pssm-ID: 130444 [Multi-domain]  Cd Length: 380  Bit Score: 42.89  E-value: 2.07e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1207686807   3 DLIIIGAGQAGLTMGYYLKQEGYNFLLLEagkqvgdswrnrydslQLFTSRSYSSLPGMTLIGEKnefpykdeiaTYLEE 82
Cdd:TIGR01377   2 DVIVVGAGIMGCFAAYHLAKHGKKTLLLE----------------QFDLPHSRGSSHGQSRIIRK----------AYPED 55
                          90       100       110       120       130       140
                  ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1207686807  83 yakhFQLPVQLQTEVLKIKKEKEI-FELHTPTEILQTkkviiasGAFQQPFIPSVSANLSSH 143
Cdd:TIGR01377  56 ----FYTPMMLECYQLWAQLEKEAgTKLHRQTGLLLL-------GPKENQFLKTIQATLSRH 106
 
Name Accession Description Interval E-value
CzcO COG2072
Predicted flavoprotein CzcO associated with the cation diffusion facilitator CzcD [Inorganic ...
1-346 1.47e-85

Predicted flavoprotein CzcO associated with the cation diffusion facilitator CzcD [Inorganic ion transport and metabolism];


Pssm-ID: 441675 [Multi-domain]  Cd Length: 414  Bit Score: 264.42  E-value: 1.47e-85
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1207686807   1 MKDLIIIGAGQAGLTMGYYLKQEGYNFLLLEAGKQVGDSWR-NRYDSLQLFTSRSYSSLPGMTLIGEKNEFPYKDEIATY 79
Cdd:COG2072     6 HVDVVVIGAGQAGLAAAYHLRRAGIDFVVLEKADDVGGTWRdNRYPGLRLDTPSHLYSLPFFPNWSDDPDFPTGDEILAY 85
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1207686807  80 LEEYAKHFQL--PVQLQTEVLKI--KKEKEIFELHTPT-EILQTKKVIIASGAFQQPFIPSVSANLSSHIFQIHSSQYKS 154
Cdd:COG2072    86 LEAYADKFGLrrPIRFGTEVTSArwDEADGRWTVTTDDgETLTARFVVVATGPLSRPKIPDIPGLEDFAGEQLHSADWRN 165
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1207686807 155 PSQIPKGKVLVVGGGNSGMQIAVELAKTHE-VTVSISHPLTFLPLQLFGKSIFNLLEKVGL-LYAEINTKRGRWFQKRK- 231
Cdd:COG2072   166 PVDLAGKRVLVVGTGASAVQIAPELARVAAhVTVFQRTPPWVLPRPNYDPERGRPANYLGLeAPPALNRRDARAWLRRLl 245
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1207686807 232 ------------DPIFGFEGK---------KLIRNGAIKL-QEKVVSASGNNIMFQNGDIYSAESVIWSTGFVQNYNWIE 289
Cdd:COG2072   246 raqvkdpelgllTPDYPPGCKrpllstdyyEALRRGNVELvTGGIERITEDGVVFADGTEHEVDVIVWATGFRADLPWLA 325
                         330       340       350       360       370       380
                  ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1207686807 290 IEQAVNEKGF--PNHIKGI--SPVKGLYYIGLPWQSqRGSALICGVGKDAAYVLSEIKKID 346
Cdd:COG2072   326 PLDVRGRDGRsgPRAYLGVvvPGFPNLFFLGPNSPS-GHSSLTLGAERQARYIARLIAHMR 385
Pyr_redox_3 pfam13738
Pyridine nucleotide-disulphide oxidoreductase;
12-253 2.07e-40

Pyridine nucleotide-disulphide oxidoreductase;


Pssm-ID: 404603 [Multi-domain]  Cd Length: 296  Bit Score: 143.90  E-value: 2.07e-40
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1207686807  12 AGLTMGYYLKQEG-YNFLLLEAGkQVGDSWRNRYDSLQLFTSrSYSS----LPGMTLI--------GEKNEFPYKDEIAT 78
Cdd:pfam13738   2 AGIGCAIALKKAGlEDYLILEKG-NIGNSFYRYPTHMTFFSP-SFTSngfgIPDLNAIspgtspafTFNREHPSGNEYAE 79
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1207686807  79 YLEEYAKHFQLPVQLQTEVLKIKKEKEIFELHTPTEILQTKKVIIASGAFQQPFIPSVSANlsshifQIHSSQYKSPSQI 158
Cdd:pfam13738  80 YLRRVADHFELPINLFEEVTSVKKEDDGFVVTTSKGTYQARYVIIATGEFDFPNKLGVPEL------PKHYSYVKDFHPY 153
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1207686807 159 PKGKVLVVGGGNSGMQIAVELAKT-HEVTVSISHPLTF--------------------LPLQLFGKSIFN----LLEKVG 213
Cdd:pfam13738 154 AGQKVVVIGGYNSAVDAALELVRKgARVTVLYRGSEWEdrdsdpsyslspdtlnrleeLVKNGKIKAHFNaevkEITEVD 233
                         250       260       270       280
                  ....*....|....*....|....*....|....*....|...
gi 1207686807 214 LLYaEINTKRGRWFQKRKDPIF--GFE-GKKLIRNGAIKLQEK 253
Cdd:pfam13738 234 VSY-KVHTEDGRKVTSNDDPILatGYHpDLSFLKKGLFELDED 275
TrxB COG0492
Thioredoxin reductase [Posttranslational modification, protein turnover, chaperones];
3-187 2.86e-19

Thioredoxin reductase [Posttranslational modification, protein turnover, chaperones];


Pssm-ID: 440258 [Multi-domain]  Cd Length: 305  Bit Score: 86.71  E-value: 2.86e-19
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1207686807   3 DLIIIGAGQAGLTMGYYLKQEGYNFLLLEAGKQVGdswrnrydslQLFTSRSYSSLPGmtligekneFPYK---DEIATY 79
Cdd:COG0492     2 DVVIIGAGPAGLTAAIYAARAGLKTLVIEGGEPGG----------QLATTKEIENYPG---------FPEGisgPELAER 62
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1207686807  80 LEEYAKHFQLPVQLqTEVLKIKKEKEIFELHTPT-EILQTKKVIIASGAF-QQPFIPS--------VSANLSSHIFQIhs 149
Cdd:COG0492    63 LREQAERFGAEILL-EEVTSVDKDDGPFRVTTDDgTEYEAKAVIIATGAGpRKLGLPGeeefegrgVSYCATCDGFFF-- 139
                         170       180       190       200
                  ....*....|....*....|....*....|....*....|
gi 1207686807 150 sqykspsqipKGK-VLVVGGGNSGMQIAVELAK-THEVTV 187
Cdd:COG0492   140 ----------RGKdVVVVGGGDSALEEALYLTKfASKVTL 169
Pyr_redox_2 pfam07992
Pyridine nucleotide-disulphide oxidoreductase; This family includes both class I and class II ...
2-289 2.57e-16

Pyridine nucleotide-disulphide oxidoreductase; This family includes both class I and class II oxidoreductases and also NADH oxidases and peroxidases. This domain is actually a small NADH binding domain within a larger FAD binding domain.


Pssm-ID: 400379 [Multi-domain]  Cd Length: 301  Bit Score: 78.13  E-value: 2.57e-16
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1207686807   2 KDLIIIGAGQAGLTMGYYLKQEGYNFLLLEAGKQvgdswrnrydsLQLFTSRSYSSLPGMtlIGEKNEFPYKDEIATYLE 81
Cdd:pfam07992   1 YDVVVIGGGPAGLAAALTLAQLGGKVTLIEDEGT-----------CPYGGCVLSKALLGA--AEAPEIASLWADLYKRKE 67
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1207686807  82 EYAKHFQLPVQ--LQTEVLKI-KKEKEIFELHTPT---EILQTKKVIIASGAfqQPFIPSVS-ANLSSHIFQIHSSQYKS 154
Cdd:pfam07992  68 EVVKKLNNGIEvlLGTEVVSIdPGAKKVVLEELVDgdgETITYDRLVIATGA--RPRLPPIPgVELNVGFLVRTLDSAEA 145
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1207686807 155 PSQIPK-GKVLVVGGGNSGMQIAVELAKthevtvsishpltflplqlFGKsifnlleKVGLLYaeintkRGRWFQKRKDP 233
Cdd:pfam07992 146 LRLKLLpKRVVVVGGGYIGVELAAALAK-------------------LGK-------EVTLIE------ALDRLLRAFDE 193
                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1207686807 234 IFG-FEGKKLIRNG-AIKLQEKVVSASGNNI----MFQNGDIYSAESVIWSTGFVQNYNWIE 289
Cdd:pfam07992 194 EISaALEKALEKNGvEVRLGTSVKEIIGDGDgvevILKDGTEIDADLVVVAIGRRPNTELLE 255
FMO-like pfam00743
Flavin-binding monooxygenase-like; This family includes FMO proteins, cyclohexanone ...
2-289 8.06e-16

Flavin-binding monooxygenase-like; This family includes FMO proteins, cyclohexanone mono-oxygenase and a number of different mono-oxygenases.


Pssm-ID: 395602 [Multi-domain]  Cd Length: 531  Bit Score: 78.28  E-value: 8.06e-16
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1207686807   2 KDLIIIGAGQAGLTMGYYLKQEGYNFLLLEAGKQVGDSWR----------NRYDSLQLFTSRSYSSLPGMTLIGEKNEFP 71
Cdd:pfam00743   2 KKVAVIGAGVSGLASIKCCLEEGLEPTCFERSDDIGGLWRftenveegraSIYKSVITNTSKEMSCFSDFPFPEDYPNFM 81
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1207686807  72 YKDEIATYLEEYAKHFQL--PVQLQTEVLKIKKEKEI-----FELHTPTEILQTKK----VIIASGAFQQPFIPSVS--- 137
Cdd:pfam00743  82 HNSKFLEYFRMFAKEFDLlkYIQFKTTVCSVKKRPDFstsgqWEVVTEHEGKQESAvfdaVMVCTGHHTNPHLPLESfpg 161
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1207686807 138 -ANLSSHIFqiHSSQYKSPSQIPKGKVLVVGGGNSGMQIAVELAKTHE-VTVSISH-------------PLTFLPLQLFG 202
Cdd:pfam00743 162 iEKFKGQYF--HSRDYKHPEGFTGKRVLVIGIGNSGGDIAVELSHTAAqVFLSTRRgswvlsrvsdhgyPWDMLFSTRFT 239
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1207686807 203 KSIFNLLEKvGLLYAEINTKRGRWFQ------------KRKDPIFGFEGKKLIRNGAIKLQEKVVSASGNNIMFQNGDIY 270
Cdd:pfam00743 240 SFLRNILPT-SISNWLMEKQMNRRFNhenyglkpknraLSKEPVVNDDLPNRILCGAVKVKPNVKEFTETSAIFEDGTVE 318
                         330       340
                  ....*....|....*....|
gi 1207686807 271 SA-ESVIWSTGFVQNYNWIE 289
Cdd:pfam00743 319 EDiDVVIFATGYTFAFPFLE 338
PLN02172 PLN02172
flavin-containing monooxygenase FMO GS-OX
2-319 1.50e-15

flavin-containing monooxygenase FMO GS-OX


Pssm-ID: 215116 [Multi-domain]  Cd Length: 461  Bit Score: 77.21  E-value: 1.50e-15
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1207686807   2 KDLIIIGAGQAGLTMGYYLKQEGYNFLLLEAGKQVGDSW----RNRYDSLQLFTSRS------YSSL------------- 58
Cdd:PLN02172   11 QHVAVIGAGAAGLVAARELRREGHTVVVFEREKQVGGLWvytpKSESDPLSLDPTRSivhssvYESLrtnlprecmgyrd 90
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1207686807  59 -PGMTLIGEKN----EFPYKDEIATYLEEYAKHFQLP--VQLQTEVLKIKKEKEIFELHTPT-------EILQTkkVIIA 124
Cdd:PLN02172   91 fPFVPRFDDESrdsrRYPSHREVLAYLQDFAREFKIEemVRFETEVVRVEPVDGKWRVQSKNsggfskdEIFDA--VVVC 168
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1207686807 125 SGAFQQPFIPSVSANLSSHIFQIHSSQYKSPSQIPKGKVLVVGGGNSGMQIAVELAK-THEVTVS--ISHPLTFLPLQLF 201
Cdd:PLN02172  169 NGHYTEPNVAHIPGIKSWPGKQIHSHNYRVPDPFKNEVVVVIGNFASGADISRDIAKvAKEVHIAsrASESDTYEKLPVP 248
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1207686807 202 GKSIFnllekvglLYAEINTkrgrwfqkrkdpifgfegkklirngaiklqekvvSASGNNIMFQNGDIYSAESVIWSTGF 281
Cdd:PLN02172  249 QNNLW--------MHSEIDT----------------------------------AHEDGSIVFKNGKVVYADTIVHCTGY 286
                         330       340       350       360
                  ....*....|....*....|....*....|....*....|...
gi 1207686807 282 VQNYNWIEIE--QAVNEKGFPNHIKGISP---VKGLYYIGLPW 319
Cdd:PLN02172  287 KYHFPFLETNgyMRIDENRVEPLYKHVFPpalAPGLSFIGLPA 329
Lys_Orn_oxgnase pfam13434
L-lysine 6-monooxygenase/L-ornithine 5-monooxygenase; This is a family of Rossmann fold ...
67-207 7.28e-08

L-lysine 6-monooxygenase/L-ornithine 5-monooxygenase; This is a family of Rossmann fold oxidoreductases that catalyze NADPH-dependent hydroxylation and are involved in siderophore biosynthesis. This family includes L-ornithine 5-monooxygenase, which catalyzes the hydroxylation of L-ornithine at the N5 position, and L-lysine 6-monooxygenase, which catalyzes the hydroxylation of lysine at the N6 position (EC:1.14.13.59).


Pssm-ID: 433204 [Multi-domain]  Cd Length: 338  Bit Score: 53.36  E-value: 7.28e-08
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1207686807  67 KNEFPYKDEIATYLEEYAKHFQLPVQLQTEVLKIKKEKE----IFELHTP-----TEILQTKKVIIASGAfqQPFIPSVs 137
Cdd:pfam13434  88 ETFFPSRREFNDYLQWAASHLPNRLRFGQEVESVEPDAErgepLLRVRVRdadgeETTFLARNLVLGTGG--EPYIPEC- 164
                          90       100       110       120       130       140       150
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1207686807 138 ANLSSHIFqiHSSQY--KSPSQIPKGKVLVVGGGNSGMQIAVELAKT-HEVTVS-ISHPLTFLPLQL--FGKSIFN 207
Cdd:pfam13434 165 ARGGERVF--HSSEYleRIDRLAAKKRIAVVGSGQSAAEIFRDLLRRgPAYELTwVTRSPNFFPLDDspFVNEIFS 238
HemY COG1232
Protoporphyrinogen oxidase HemY/PPOX [Coenzyme transport and metabolism]; Protoporphyrinogen ...
1-37 5.59e-07

Protoporphyrinogen oxidase HemY/PPOX [Coenzyme transport and metabolism]; Protoporphyrinogen oxidase HemY/PPOX is part of the Pathway/BioSystem: Heme biosynthesis


Pssm-ID: 440845 [Multi-domain]  Cd Length: 443  Bit Score: 50.99  E-value: 5.59e-07
                          10        20        30
                  ....*....|....*....|....*....|....*..
gi 1207686807   1 MKDLIIIGAGQAGLTMGYYLKQEGYNFLLLEAGKQVG 37
Cdd:COG1232     1 MKRVAVIGGGIAGLTAAYRLAKAGHEVTVLEASDRVG 37
DadA COG0665
Glycine/D-amino acid oxidase (deaminating) [Amino acid transport and metabolism];
1-42 1.78e-05

Glycine/D-amino acid oxidase (deaminating) [Amino acid transport and metabolism];


Pssm-ID: 440429 [Multi-domain]  Cd Length: 364  Bit Score: 46.05  E-value: 1.78e-05
                          10        20        30        40
                  ....*....|....*....|....*....|....*....|....
gi 1207686807   1 MKDLIIIGAGQAGLTMGYYLKQEGYNFLLLEAGkQVGD--SWRN 42
Cdd:COG0665     2 TADVVVIGGGIAGLSTAYHLARRGLDVTVLERG-RPGSgaSGRN 44
LhgO COG0579
L-2-hydroxyglutarate oxidase LhgO [Carbohydrate transport and metabolism];
1-126 1.83e-05

L-2-hydroxyglutarate oxidase LhgO [Carbohydrate transport and metabolism];


Pssm-ID: 440344 [Multi-domain]  Cd Length: 418  Bit Score: 46.29  E-value: 1.83e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1207686807   1 MKDLIIIGAGQAGLTMGYYLKQ-EGYNFLLLEAGKQVGD--SWRN----------RYDSL---------QLFT--SR--- 53
Cdd:COG0579     4 MYDVVIIGAGIVGLALARELSRyEDLKVLVLEKEDDVAQesSGNNsgvihaglyyTPGSLkarlcvegnELFYelCRelg 83
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1207686807  54 -SYSSLPGMTLI---------------GEKNEFPY-----KDEI-------------ATY---------------LEEYA 84
Cdd:COG0579    84 iPFKRCGKLVVAtgeeevafleklyerGKANGVPGleildREELrelepllsdegvaALYspstgivdpgaltraLAENA 163
                         170       180       190       200
                  ....*....|....*....|....*....|....*....|..
gi 1207686807  85 KHFQLPVQLQTEVLKIKKEKEIFELHTPTEILQTKKVIIASG 126
Cdd:COG0579   164 EANGVELLLNTEVTGIEREGDGWEVTTNGGTIRARFVINAAG 205
NAD_binding_8 pfam13450
NAD(P)-binding Rossmann-like domain;
6-37 2.39e-05

NAD(P)-binding Rossmann-like domain;


Pssm-ID: 433218 [Multi-domain]  Cd Length: 67  Bit Score: 41.75  E-value: 2.39e-05
                          10        20        30
                  ....*....|....*....|....*....|..
gi 1207686807   6 IIGAGQAGLTMGYYLKQEGYNFLLLEAGKQVG 37
Cdd:pfam13450   1 IVGAGLAGLVAAALLAKRGFRVLVLEKRDRLG 32
YobN COG1231
Monoamine oxidase [Amino acid transport and metabolism];
1-37 2.94e-05

Monoamine oxidase [Amino acid transport and metabolism];


Pssm-ID: 440844 [Multi-domain]  Cd Length: 440  Bit Score: 45.68  E-value: 2.94e-05
                          10        20        30
                  ....*....|....*....|....*....|....*..
gi 1207686807   1 MKDLIIIGAGQAGLTMGYYLKQEGYNFLLLEAGKQVG 37
Cdd:COG1231     7 GKDVVIVGAGLAGLAAARELRKAGLDVTVLEARDRVG 43
YhiN COG2081
Predicted flavoprotein YhiN [General function prediction only];
5-126 3.02e-05

Predicted flavoprotein YhiN [General function prediction only];


Pssm-ID: 441684 [Multi-domain]  Cd Length: 402  Bit Score: 45.43  E-value: 3.02e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1207686807   5 IIIGAGQAGLTMGYYLKQEGYNFLLLEAGKQVGdswR-------------NRYDSLQLFTSRS------YSSLpgmtlig 65
Cdd:COG2081     1 IVIGAGAAGLMAAITAAERGARVLLLEKNPKVG---RkilisgggrcnftNSEPLPEFLNYYGgnphflKSAL------- 70
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1207686807  66 ekNEFPYKD-----E---IATY--------------------LEEYAKHFQLPVQLQTEVLKIKKEKEIFELHTPT-EIL 116
Cdd:COG2081    71 --SRFTPEDliaffEglgIETKeessgrvfpdsskasdilraLLAELREAGVEIRLRTRVTGIEKEDGGFGVETPDgETV 148
                         170
                  ....*....|
gi 1207686807 117 QTKKVIIASG 126
Cdd:COG2081   149 RADAVVLATG 158
DAO pfam01266
FAD dependent oxidoreductase; This family includes various FAD dependent oxidoreductases: ...
3-42 4.88e-05

FAD dependent oxidoreductase; This family includes various FAD dependent oxidoreductases: Glycerol-3-phosphate dehydrogenase EC:1.1.99.5, Sarcosine oxidase beta subunit EC:1.5.3.1, D-alanine oxidase EC:1.4.99.1, D-aspartate oxidase EC:1.4.3.1.


Pssm-ID: 426168 [Multi-domain]  Cd Length: 339  Bit Score: 44.70  E-value: 4.88e-05
                          10        20        30        40
                  ....*....|....*....|....*....|....*....|..
gi 1207686807   3 DLIIIGAGQAGLTMGYYLKQEGYNFLLLEAGKQVGD--SWRN 42
Cdd:pfam01266   1 DVVVIGGGIVGLSTAYELARRGLSVTLLERGDDPGSgaSGRN 42
PRK07208 PRK07208
hypothetical protein; Provisional
1-37 6.43e-05

hypothetical protein; Provisional


Pssm-ID: 235967 [Multi-domain]  Cd Length: 479  Bit Score: 44.49  E-value: 6.43e-05
                          10        20        30
                  ....*....|....*....|....*....|....*..
gi 1207686807   1 MKDLIIIGAGQAGLTMGYYLKQEGYNFLLLEAGKQVG 37
Cdd:PRK07208    4 KKSVVIIGAGPAGLTAAYELLKRGYPVTVLEADPVVG 40
COG1233 COG1233
Phytoene dehydrogenase-related protein [Secondary metabolites biosynthesis, transport and ...
1-37 1.39e-04

Phytoene dehydrogenase-related protein [Secondary metabolites biosynthesis, transport and catabolism];


Pssm-ID: 440846 [Multi-domain]  Cd Length: 491  Bit Score: 43.68  E-value: 1.39e-04
                          10        20        30
                  ....*....|....*....|....*....|....*..
gi 1207686807   1 MKDLIIIGAGQAGLTMGYYLKQEGYNFLLLEAGKQVG 37
Cdd:COG1233     3 MYDVVVIGAGIGGLAAAALLARAGYRVTVLEKNDTPG 39
soxA_mon TIGR01377
sarcosine oxidase, monomeric form; Sarcosine oxidase catalyzes the oxidative demethylation of ...
3-143 2.07e-04

sarcosine oxidase, monomeric form; Sarcosine oxidase catalyzes the oxidative demethylation of sarcosine to glycine. The reaction converts tetrahydrofolate to 5,10-methylene-tetrahydrofolate. The enzyme is known in monomeric and heterotetrameric (alpha,beta,gamma,delta) forms [Energy metabolism, Amino acids and amines]


Pssm-ID: 130444 [Multi-domain]  Cd Length: 380  Bit Score: 42.89  E-value: 2.07e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1207686807   3 DLIIIGAGQAGLTMGYYLKQEGYNFLLLEagkqvgdswrnrydslQLFTSRSYSSLPGMTLIGEKnefpykdeiaTYLEE 82
Cdd:TIGR01377   2 DVIVVGAGIMGCFAAYHLAKHGKKTLLLE----------------QFDLPHSRGSSHGQSRIIRK----------AYPED 55
                          90       100       110       120       130       140
                  ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1207686807  83 yakhFQLPVQLQTEVLKIKKEKEI-FELHTPTEILQTkkviiasGAFQQPFIPSVSANLSSH 143
Cdd:TIGR01377  56 ----FYTPMMLECYQLWAQLEKEAgTKLHRQTGLLLL-------GPKENQFLKTIQATLSRH 106
PLN02976 PLN02976
amine oxidase
2-59 2.43e-04

amine oxidase


Pssm-ID: 215527 [Multi-domain]  Cd Length: 1713  Bit Score: 43.32  E-value: 2.43e-04
                           10        20        30        40        50
                   ....*....|....*....|....*....|....*....|....*....|....*...
gi 1207686807    2 KDLIIIGAGQAGLTMGYYLKQEGYNFLLLEAGKQVGDswrnrydslQLFTSRSYSSLP 59
Cdd:PLN02976   694 KKIIVVGAGPAGLTAARHLQRQGFSVTVLEARSRIGG---------RVYTDRSSLSVP 742
COG3380 COG3380
Predicted NAD/FAD-dependent oxidoreductase [General function prediction only];
1-37 9.70e-04

Predicted NAD/FAD-dependent oxidoreductase [General function prediction only];


Pssm-ID: 442607 [Multi-domain]  Cd Length: 331  Bit Score: 40.63  E-value: 9.70e-04
                          10        20        30
                  ....*....|....*....|....*....|....*..
gi 1207686807   1 MKDLIIIGAGQAGLTMGYYLKQEGYNFLLLEAGKQVG 37
Cdd:COG3380     3 MPDIAIIGAGIAGLAAARALQDAGHEVTVFEKSRGVG 39
PRK12814 PRK12814
putative NADPH-dependent glutamate synthase small subunit; Provisional
2-37 2.15e-03

putative NADPH-dependent glutamate synthase small subunit; Provisional


Pssm-ID: 139246 [Multi-domain]  Cd Length: 652  Bit Score: 39.71  E-value: 2.15e-03
                          10        20        30
                  ....*....|....*....|....*....|....*.
gi 1207686807   2 KDLIIIGAGQAGLTMGYYLKQEGYNFLLLEAGKQVG 37
Cdd:PRK12814  194 KKVAIIGAGPAGLTAAYYLLRKGHDVTIFDANEQAG 229
HdrA COG1148
Heterodisulfide reductase, subunit A (polyferredoxin) [Energy production and conversion];
162-186 3.80e-03

Heterodisulfide reductase, subunit A (polyferredoxin) [Energy production and conversion];


Pssm-ID: 440762 [Multi-domain]  Cd Length: 563  Bit Score: 39.07  E-value: 3.80e-03
                          10        20
                  ....*....|....*....|....*.
gi 1207686807 162 KVLVVGGGNSGMQIAVELAKT-HEVT 186
Cdd:COG1148   142 RALVIGGGIAGMTAALELAEQgYEVY 167
PRK07233 PRK07233
hypothetical protein; Provisional
6-37 5.18e-03

hypothetical protein; Provisional


Pssm-ID: 235977 [Multi-domain]  Cd Length: 434  Bit Score: 38.33  E-value: 5.18e-03
                          10        20        30
                  ....*....|....*....|....*....|..
gi 1207686807   6 IIGAGQAGLTMGYYLKQEGYNFLLLEAGKQVG 37
Cdd:PRK07233    4 IVGGGIAGLAAAYRLAKRGHEVTVFEADDQLG 35
PRK11883 PRK11883
protoporphyrinogen oxidase; Reviewed
2-37 9.64e-03

protoporphyrinogen oxidase; Reviewed


Pssm-ID: 237009 [Multi-domain]  Cd Length: 451  Bit Score: 37.52  E-value: 9.64e-03
                          10        20        30
                  ....*....|....*....|....*....|....*...
gi 1207686807   2 KDLIIIGAGQAGLTMGYYLKQEGYNF--LLLEAGKQVG 37
Cdd:PRK11883    1 KKVAIIGGGITGLSAAYRLHKKGPDAdiTLLEASDRLG 38
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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