|
Name |
Accession |
Description |
Interval |
E-value |
| btuB |
PRK10641 |
TonB-dependent vitamin B12 receptor BtuB; |
1-615 |
0e+00 |
|
TonB-dependent vitamin B12 receptor BtuB;
Pssm-ID: 236730 [Multi-domain] Cd Length: 614 Bit Score: 1207.13 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1221423650 1 MIKKVSLLTALSVTAFSGWAQD-SADSLVVTANRFEQPEKSVLAATSVVTREDIDRWQSTTVIDVMRRLPGVDTAQNGGM 79
Cdd:PRK10641 1 MIKKASLLTALSVTAFSGWAQDtSPDTLVVTANRFQQPVSTVLAPTTVVTRDDIDRWQSKSVNDVLRRLPGVDIAQNGGL 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1221423650 80 GQLSSLFIRGTNSSHVLILVDGIRLNQAGVTGSSDLSQFPIALVQRIEYIRGPRSAVYGSDAIGGVVNIITTRAKDGTTL 159
Cdd:PRK10641 81 GQLSSLFIRGTNSSHVLVLIDGVRLNQAGISGSADLSQIPISLVQRIEYIRGPRSAVYGSDAIGGVVNIITTRDKPGTTL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1221423650 160 NAGVGSHGYQNYGGSTQQTLGDSTRVTLAGDYTYTKGFDVVADGNNGGLAQTDRDGYMNKTLYGALEHTFSEQWSGFVRG 239
Cdd:PRK10641 161 SAGWGSNGYQNYDGSTQQQLGDNTRVTLAGDYTYTKGFDVVAYGNTGTQAQPDRDGFMSKTLWGGLEHQFNDQWSGFVRG 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1221423650 240 YGYSNRTAYDGYYSAFTPdvLVDTRQLYSQTWDAGLRFNEDIFHSQLLSSYSHSKDFNYDPHLGRYDSTATLDEIKQYNV 319
Cdd:PRK10641 241 YGYDNRTDYDAYYSPGSP--LIDTRQLYSQSWDAGLRYNGGIYSSQLIASYSHSKDYNYDPHYGRYDSSATLDDMKQYNV 318
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1221423650 320 QWTNSVDVGHGNIGAGVDWQKQSTEPNTNYVTNGYDLRNTGVYLTGLQKLGDFTLEGAARSDDNSQFGRHGTWQSSAAWE 399
Cdd:PRK10641 319 QWGNTVQVGHGNISAGVDWQKQTTTPGTGYVPDGYDQRNTGIYLTGQQQIGDVTLEGAARSDDNSQFGWHGTWQTSAGWE 398
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1221423650 400 FIEGYRFIASYGTAYKAPNLGQLYGYYGNDHLDPEESKQWEGAFEGLTAGVSWRVSAYRNDVDNLIDFNNNLQEYYNVGK 479
Cdd:PRK10641 399 FIDGYRFIASYGTAFKAPNLGQLYGFYGNPNLKPEESKQWEGGFEGLTGPVNWRLSGYRNDIDNLIDYDDHTLKYYNVGK 478
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1221423650 480 ARIKGVEATASFDTGPVMHTVGYDYVDARNATTNELLDRRAKQQVKYQLDTQIYDLDWSLTYHYLGTRYDTNFGTYPYQK 559
Cdd:PRK10641 479 ATIKGVEWTGNFDTGPLTHQVTLDYVDPRNAITDEPLARRAKQQVKYQLDWQLYDFDWGVTYQYLGTRYDKDYSTYPYQT 558
|
570 580 590 600 610
....*....|....*....|....*....|....*....|....*....|....*.
gi 1221423650 560 VKMGGVSLWDAAVSYPVTSHLTVRGKIANLFDKDYETVYGYQTAGREYTLSGSYTF 615
Cdd:PRK10641 559 VKLGGVSLWDLAVSYPVTSHLTVRGKIANLFDKDYETVYGYQTAGREYTLSGSYTF 614
|
|
| TonB-B12 |
TIGR01779 |
TonB-dependent vitamin B12 receptor; This model represents the TonB-dependent outer membrane ... |
2-615 |
0e+00 |
|
TonB-dependent vitamin B12 receptor; This model represents the TonB-dependent outer membrane receptor found in gamma proteobacteria responsible for translocating the cobalt-containing vitamin B12 (cobalamin). [Transport and binding proteins, Other, Transport and binding proteins, Porins]
Pssm-ID: 273802 [Multi-domain] Cd Length: 614 Bit Score: 768.26 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1221423650 2 IKKVSLLTALS--VTAFSGWAQDSA---DSLVVTANRFEQPEKSVLAATSVVTREDIDRWQSTTVIDVMRRLPGVDTAQN 76
Cdd:TIGR01779 1 MQKSALAPALAslLTLCSALHANEAqplDTVVVTANRFAQTASQTLAPVTIITRQDIERTQAKSLPELLRRLPGVSIAQN 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1221423650 77 GGMGQLSSLFIRGTNSSHVLILVDGIRLNQAGvTGSSDLSQFPIALVQRIEYIRGPRSAVYGSDAIGGVVNIITTRAKD- 155
Cdd:TIGR01779 81 GGRGQNTSLFLRGTESDHVLVLIDGIRFGSAA-AGAADFQQLPVELVERIEYVRGPRSSLYGSEAIGGVINIITRRRSGg 159
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1221423650 156 -GTTLNAGVGSHGYQNYGGSTQQTLGDSTRVTLAGDYTYTKGFDVVADGnnGGLAQTDRDGYMNKTLYGALEHTFSEQWS 234
Cdd:TIGR01779 160 qGTTLSAGLGSLDYQEYSIASGVAIGENGWYSVALGTESTKGINVRPGG--PGVYDPDRDGFRSDSLLLGGGHRFDESWS 237
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1221423650 235 GFVRGYGYSNRTAYDGYySAFTPDVlvDTRQLYSQTWDAGLRFNEDIFHSQLLSSYSHSKDFNYDPHLGRYDSTAtlDEI 314
Cdd:TIGR01779 238 LFVNALRYENRNDYDNY-SFGTRLY--KEAEKGDQSFTGGRQRQSERDVSELTLSTGKSKDWDYAYSKGRYSSTS--DTR 312
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1221423650 315 KQYNVQWTNSVDVGHGNIGA-GVDWQKQSTEPNTNYvtNGYDLRNTGVYLTGLQKLGDFTLEGAARSDDNSQFGRHGTWQ 393
Cdd:TIGR01779 313 EQRNIQWQNDLLVGDGWVLAgGVDWQKDSIISSTAD--KEDDRSNTAAFAQVLQQWGQQLLEASLRRDDNQQFGSHTTGS 390
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1221423650 394 SSAAWEFIEGYRFIASYGTAYKAPNLGQLYG-YYGNDHLDPEESKQWEGAFEGLTAGVSWRVSAYRNDVDNLIDFNNNLQ 472
Cdd:TIGR01779 391 IAWGYQFIEELRFTASYGTAFKAPNLNQLYYpSYGNPNLQPETSKSAELGFYGLFSGGKWSISGYRTKINDLIDYDSHPK 470
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1221423650 473 EYYNV-GKARIKGVEATASFDTGPVMHTVGYDYVDARNATTNELLDRRAKQQVKYQLDTQIYDLDWSLTYHYLGTRYDTN 551
Cdd:TIGR01779 471 GYPNNiGEARIKGVEATAEFATGGWTHQLSVDLLDAQNVNTGNTLPRRARQMYKWNADRAFEQFDWGASYQYVGKRYDDD 550
|
570 580 590 600 610 620
....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1221423650 552 FGTYPYQKVKMGGVSLWDAAVSYPVTSHLTVRGKIANLFDKDYETVYGYQTAGREYTLSGSYTF 615
Cdd:TIGR01779 551 YNTYPTQNVRLGGYSLLDLRVSYYVTDSWTVQGRIANLFDKDYETAYGYPQAGRAYYLSIRYQF 614
|
|
| FepA |
COG4771 |
Outer membrane receptor for ferrienterochelin and colicins [Inorganic ion transport and ... |
5-583 |
1.46e-84 |
|
Outer membrane receptor for ferrienterochelin and colicins [Inorganic ion transport and metabolism];
Pssm-ID: 443803 [Multi-domain] Cd Length: 612 Bit Score: 276.74 E-value: 1.46e-84
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1221423650 5 VSLLTALSVTAFSG-WAQDSADSL---VVTANRFEQPEKSVLAATSVVTREDIDRWQSTTVIDVMRRLPGVDTAQNGGMG 80
Cdd:COG4771 4 ASLLLLLALAAQAAdALAEDATELeevVVTATRTEQSLSDAPASVSVITAEEIEKLGATDLADALRLLPGVSVTRSGGRG 83
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1221423650 81 QLSSLFIRGTNSSHVLILVDGIRLNQAGVTGSSDLSQFPIALVQRIEYIRGPRSAVYGSDAIGGVVNIITTRAKD--GTT 158
Cdd:COG4771 84 GSSGISIRGLGGDRVLVLIDGVPVNNPALGGGGDLSYIPPDDIERIEVIRGPASALYGSDAIGGVINIITKKPTDelEGS 163
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1221423650 159 LNAGVGSHGYQNYGGS-TQQTLGDSTRVTLAGDYTYTKGFDvvadgNNGGLAQTDRDGYMNKTLYGALEHTFSEQWSGFV 237
Cdd:COG4771 164 VSLGYGSNGNGTYSGSlSLGGPGDKLSFLLSGSYRDRDGYL-----DYRNGGFVGNSGYERYNLNAKLGYRLSDNHRLSL 238
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1221423650 238 RGYGYSNRTAYDGYY--SAFTPDVLVDTRQLYSQTWDAGLRFNEDIFHS-QLLSSYSHSKDFNYDPHLGRYDSTATLDEI 314
Cdd:COG4771 239 SGGYSRQDRDGGPPTlgDTEISSDNAGDRDTTTDRGNYSLRYNGDLGDNlDLSLYYSRTDRDSTNGSLGGSTGSFSDSDD 318
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1221423650 315 KQY--NVQWTNSVDVGHgNIGAGVDWQKQSTEPNTNYVTNGYDLRNTGVYLTGLQKLGD-FTLEGAARSDDNSQFGRHGT 391
Cdd:COG4771 319 TTYglELDLTYPLGGNH-TLTLGAEYRYDDLDSSSFLGGADASRDTYGLFAQDEWKLTDkLTLTAGLRYDYYSTFGASNY 397
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1221423650 392 WQSS----AAWEFIEGYRFIASYGTAYKAPNLGQLYGYY---------GNDHLDPEESKQWEGAFEG--LTAGVSWRVSA 456
Cdd:COG4771 398 TAFSprlgLRYDLSDNLTLRASYGRGFRAPSLAELYGSGtgtpgryvlGNPDLKPETSDNYELGLEYrlGNGGLSLSLTG 477
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1221423650 457 YRNDVDNLIDF------NNNLQEYYNVGKARIKGVEATASFDTGPVMH-TVGYDYVDAR--NATTNELLDRRAKQQVKYQ 527
Cdd:COG4771 478 FYTDIKDLIVLvpvgpgPGDVLQYENVGKARTYGLELELKYRLGKGLTlTASYTYLDSKidDGDTGEPLPNVPPHKANLG 557
|
570 580 590 600 610
....*....|....*....|....*....|....*....|....*....|....*..
gi 1221423650 528 LDTQIYD-LDWSLTYHYLGTRYDTNFGTYPYQKVkmGGVSLWDAAVSYPVTSHLTVR 583
Cdd:COG4771 558 LDYRLPKwWLLLLLTRYYGGRYVTPPSGRLEGYT--PGYTLLDLRASYKLTKNLTLS 612
|
|
| ligand_gated_channel |
cd01347 |
TonB dependent/Ligand-Gated channels are created by a monomeric 22 strand (22,24) ... |
45-615 |
2.55e-82 |
|
TonB dependent/Ligand-Gated channels are created by a monomeric 22 strand (22,24) anti-parallel beta-barrel. Ligands apparently bind to the large extracellular loops. The N-terminal 150-200 residues form a plug from the periplasmic end of barrel. Energy (proton-motive force) and TonB-dependent conformational alteration of channel (parts of plug, and loops 7 and 8) allow passage of ligand. FepA residues 12-18 form the TonB box, which mediates the interaction with the TonB-containing inner membrane complex. TonB preferentially interacts with ligand-bound receptors. Transport thru the channel may resemble passage thru an air lock. In this model, ligand binding leads to closure of the extracellular end of pore, then a TonB-mediated signal facillitates opening of the interior side of pore, deforming the N-terminal plug and allowing passage of the ligand to the periplasm. Such a mechanism would prevent the free diffusion of small molecules thru the pore.
Pssm-ID: 238657 [Multi-domain] Cd Length: 635 Bit Score: 271.25 E-value: 2.55e-82
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1221423650 45 TSVVTREDIDRWQSTTVIDVMRRLPGVDTAQNGGMGQlSSLFIRGTNSSHVLILVDGIRLNQAGVTGSSDLSQFPIALVQ 124
Cdd:cd01347 2 VSVITAEDIEKQPATSLADLLRRIPGVSVTRGGGGGG-STISIRGFGPDRTLVLVDGLPLASSNYGRGVDLNTIPPELIE 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1221423650 125 RIEYIRGPRSAVYGSDAIGGVVNIITTRAKDGTTLNAGVG-----SHGYQNYGGSTQQTLGDSTRVTLAGDYTYTKGfdv 199
Cdd:cd01347 81 RVEVLKGPSSALYGSGAIGGVVNIITKRPTDEFGGSVTAGygsdnSGSSGGGGFDVSGALADDGAFGARLYGAYRDG--- 157
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1221423650 200 vaDGNNGGLAQTDRDGYMNKTLYGALEHTFSEQWSGFVRGYGYSNRTAYDGY---------------YSAFTPDVLVDTR 264
Cdd:cd01347 158 --DGTIDGDGQADDSDEERYNVAGKLDWRPDDDTRLTLDAGYQDQDADGPGGtlpangtgsslgggpSSNTNGDRDWDYR 235
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1221423650 265 QLYSQTWDAGLRFNEDIFHSQLLSSYSHSKDF------------NYDPHLGRYDSTATLDEIKQYNVQWTNSVDVGHGNI 332
Cdd:cd01347 236 DRYRKRASLGLEHDLNDTGWTLRANLSYSYTDndgdplilnggnNAAGGDLGRSGYSSERDTTQLGFDAGLNAPFGTGPV 315
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1221423650 333 G----AGVDWQKQStepntnyvtngYDLRNTGVYLTGLQKLGD-FTLEGAARSDDNSQ--------------FGRHGTWQ 393
Cdd:cd01347 316 AhtltLGVEYRREE-----------LDEKQTALYAQDTIELTDdLTLTLGLRYDHYDQdskdtiaggttakkSYSHWSPS 384
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1221423650 394 SSAAWEFIEGYRFIASYGTAYKAPNLGQLYG--------YYGNDHLDPEESKQWEGAFEG-LTAGVSWRVSAYRNDVDNL 464
Cdd:cd01347 385 LGLVYKLTDGLSLYASYSQGFRAPSLGELYGggshggtaAVGNPNLKPEKSKQYELGLKYdPGDGLTLSAALFRIDIKNE 464
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1221423650 465 IDF------NNNLQEYYNVGKARIKGVEATASFD-TGPVMHTVGYDYVDARN-----ATTNELLDRRAKQQVKYQLDTQI 532
Cdd:cd01347 465 IVStptntgLGLVTVYVNGGKARIRGVELEASYDlTDGLGLTGSYTYTDTEVkrtdgATTGNRLPGIPKHTANLGLDYEL 544
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1221423650 533 YDLDWSL--TYHYLGTRYDTNFGTypYQKVKMGGVSLWDAAVSYPVTSHLTVRGKIANLFDKDYETV--------YGYQT 602
Cdd:cd01347 545 PDEGLTAggGVRYRGKQYADTANG--NNTVKVPGYTLVDLSASYQFTKNLTLRLGVNNLFDKDYYTSlsvrgsglYGYYG 622
|
650
....*....|...
gi 1221423650 603 AGREYTLSGSYTF 615
Cdd:cd01347 623 PGRTYYLSVSYKF 635
|
|
| BtuB |
COG4206 |
Outer membrane cobalamin receptor protein BtuB [Coenzyme transport and metabolism]; |
28-321 |
7.08e-62 |
|
Outer membrane cobalamin receptor protein BtuB [Coenzyme transport and metabolism];
Pssm-ID: 443355 [Multi-domain] Cd Length: 276 Bit Score: 206.26 E-value: 7.08e-62
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1221423650 28 VVTANRFEQPEKSVLAATSVVTREDIDRWQSTTVIDVMRRLPGVDTAQNGGMGQLSSLFIRGTNSSHVLILVDGIRLNQA 107
Cdd:COG4206 2 VVTATRLEQSKSDLTGSVTVIDAEELERSGATSLADALRRVPGVQVSSSGGPGSAASISIRGLGSNQTLVLIDGVPLNDP 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1221423650 108 GvTGSSDLSQFPIALVQRIEYIRGPRSAVYGSDAIGGVVNIITTRAKDG--TTLNAGVGSHGYQNYGGSTQQTLGDsTRV 185
Cdd:COG4206 82 S-LGGVDLSLIPPDDIERIEVLKGAASALYGSDAIGGVINITTKKGKKGfkGSVSASYGSFGTRRLSASLSGGAGK-FSY 159
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1221423650 186 TLAGDYTYTKGFDVVADGNNgglaqtDRDGYMNKTLYGALEHTFSEQWSGFVRGYGYSNRTAYDGYYSAFtpdvlvdtrq 265
Cdd:COG4206 160 SLSASYRRSDGYRYNDPDLR------NNDGYENTSLNARLGYKLGDNGSLSLSGGYSDSERGYPGAVGSD---------- 223
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....*.
gi 1221423650 266 lYSQTWDAGLRFNEDIFHSQLLSSYSHSKDFNYDPhlGRYDSTATLDEIKQYNVQW 321
Cdd:COG4206 224 -RNLRLSLSLEYKLSDGWSLLLLAYYYYDRDYEDG--GGDSAGTSNTDGARAGLSY 276
|
|
| CirA |
COG1629 |
Outer membrane receptor protein, Fe transport [Inorganic ion transport and metabolism]; |
25-605 |
3.12e-59 |
|
Outer membrane receptor protein, Fe transport [Inorganic ion transport and metabolism];
Pssm-ID: 441236 [Multi-domain] Cd Length: 644 Bit Score: 209.30 E-value: 3.12e-59
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1221423650 25 DSLVVTANRFEQPEKSVLAATSVVTREDIDRWQSTTVIDVMRRLPGVDTAQNGGMGqlSSLFIRGTNSSH--VLILVDGI 102
Cdd:COG1629 2 EEVVVTATRTDESLQDVPGSVSVISREQLEDQPATDLGDLLRRVPGVSVTSAGGGA--GQISIRGFGGGGnrVLVLVDGV 79
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1221423650 103 RLNQAGvTGSSDLSQFPIALVQRIEYIRGPRSAVYGSDAIGGVVNIITTRAKDGT--TLNAGVGSHGYQNYGGSTQQTlG 180
Cdd:COG1629 80 PLNDPS-GGDGGLSYIDPEDIERVEVLRGPSSALYGSGALGGVINIVTKKPKDGKggEVSASYGSYGTYRASLSLSGG-N 157
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1221423650 181 DSTRVTLAGDYTYTKGFdvvadgnngglaqTDRDGYMNKTLYGALEHTFSEQWS---------------GFVRGYGYSNR 245
Cdd:COG1629 158 GKLAYRLSASYRDSDGY-------------RDNSDSDRYNLRAKLGYQLGDDTRltlsasysdsdqdspGYLTLAALRPR 224
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1221423650 246 TAYDGYYSAFTPDVLVDTRQLYS-----QTWDAGLRFNEDIFHSQLLSSYSHSKDFNYDPhLGRYDSTATLDEIKQYNVQ 320
Cdd:COG1629 225 GAMDDGTNPYSNDTDDNTRDRYSlsleyEHLGDGLKLSASAYYRYDDTDLDSDFTPTPAD-GGTLEQTDFDNRTYGLELR 303
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1221423650 321 WTNSVDVGHG-NIGAGVDWQKQSTE--------------PNTNYVTNGYDLRNTGVYLTGLQKLGD-FTLEGAARSDDNS 384
Cdd:COG1629 304 LTYDLGFGGKhTLLVGLDYQRQDLDgsgypldlgsgslpTLTSGADDDGTTTSLALYAQDTYKLTDkLTLTAGLRYDYVS 383
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1221423650 385 QFGRHGTWQS----------------SAAWEFIEGYRFIASYGTAYKAPNLGQLYGY------YGNDHLDPEESKQWE-G 441
Cdd:COG1629 384 YDVDDTVTGTdsasgsrsysafspslGLTYQLSPNLSLYASYSRGFRAPTFGELYANgtdpysVGNPDLKPETSTNYElG 463
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1221423650 442 A-FEGLTAGVSWRVSAYRNDVDNLIDF-----NNNLQEYY-NVGKARIKGVEATASFDTGPVMHT-VGYDYVDARN---- 509
Cdd:COG1629 464 LrYRLLDGRLSLSLALFYSDVDNEILSvplpnDSGFSTYYtNAGKARSYGVELELSYQLTPGLSLnASYSYTDAKFdddt 543
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1221423650 510 ----ATTNELLDRRAKQQVKYQLDTQIYD-LDWSLTYHYLGTRYDTNFGTYPYqkvkMGGVSLWDAAVSYPVTSHLTVRG 584
Cdd:COG1629 544 dgsaDLDGNRLPGVPPLTANLGLTYEFPGgWSLGLGVRYVGDRYLDDANTQGA----PGGYTLVDLGAGYRFGDNLTLSL 619
|
650 660
....*....|....*....|.
gi 1221423650 585 KIANLFDKDYETVYGYQTAGR 605
Cdd:COG1629 620 GVDNLFDKKYATSLSVRASNV 640
|
|
| FhuE |
COG4773 |
Outer membrane receptor for ferric coprogen and ferric-rhodotorulic acid [Inorganic ion ... |
8-615 |
6.73e-50 |
|
Outer membrane receptor for ferric coprogen and ferric-rhodotorulic acid [Inorganic ion transport and metabolism];
Pssm-ID: 443805 [Multi-domain] Cd Length: 692 Bit Score: 184.33 E-value: 6.73e-50
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1221423650 8 LTALSVTAFSGWAQDSADSLVVTANRFEQPEKSVLAATSVVTREDIDRWQSTTVIDVMRRLPGVDTAQNGGMGQlSSLFI 87
Cdd:COG4773 32 LPEVTVTGTAEGTGGYTAKSSSTATKLDTPLRETPQSVSVVTRQLIEDQGATTLDDALRNVPGVTVSSYDGGGR-DSFSI 110
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1221423650 88 RGTNSSHvlILVDGIRLNQAGVTgssdlsQFPIALVQRIEYIRGPRSAVYGSDAIGGVVNIITTRAKD--GTTLNAGVGS 165
Cdd:COG4773 111 RGFSIDN--YLRDGLPLGGFGGG------QPDTANLERVEVLKGPAGLLYGAGSPGGLVNLVTKRPTAepQGEVSLSAGS 182
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1221423650 166 HG-------------------------------YQNYGGSTQQT--------LGDSTRVTLAGDYTYTKG-FDVVADGNN 205
Cdd:COG4773 183 WDtyratadvggplnedgtlryrlnaayedgdsFRDGVDNRRTLiapsldwdLTDDTTLTLGAEYQDDDStGDRGFLPLD 262
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1221423650 206 GGLAQTDRDGYMN----------KTLYGALEHTFSEQWSgfVRGYGYSNRTAYDGYYSAFTPDVLVDTRQLYSQTWDAGL 275
Cdd:COG4773 263 GTLLDLPRSTNLGepwdyydtetTTLFAELEHRFNDDWS--LRANARYSDSDRDGRSAYAYGAPDAATGTLTRYASARDG 340
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1221423650 276 RFNEDIFhsQLlssyshskDFNYDPHLGRYDSTATL--DEIKQYNVQWTNSVDVghGNIGAGVDWqkQSTEPNTNYVTNG 353
Cdd:COG4773 341 DSRSDSL--DA--------NLNGKFETGGLEHTLLVgaDYSRYDSDSDSATAGT--INIYNPVYG--NLPEPDFDASDTD 406
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1221423650 354 YDLRNTGVYLTGLQKLGD-FTLEGAARSDDNSQFGRHG-------------TWQSSAAWEFIEGYRFIASYGTAYKaPNL 419
Cdd:COG4773 407 TTTRQTGLYAQDQISLTDrLSLLLGGRYDWYETDSTNRlggsttsyddsafTPRAGLVYDLTPGLSLYASYSESFE-PQS 485
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1221423650 420 GQlyGYYGNDhLDPEESKQWE-GA-FEGLTAGVSWRVSAYRNDVDN-LIDFNNNLQEYYNVGKARIKGVEATASfdtGPV 496
Cdd:COG4773 486 GA--DNNGNP-LDPETGKQYEaGVkGELFDGRLNATLAVFDITQKNvATTDPDNPNFYVQVGEVRSRGVELELS---GEL 559
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1221423650 497 MH----TVGYDYVDARNATTNELLD---------RRAKQQVKYQLDTQIYDlDWSLT--YHYLGTRYDTNFGTypyqkVK 561
Cdd:COG4773 560 TPglnlIAGYTYTDAKITKDADALEgkrltnvprHTASLWTTYRFPSGALK-GLGLGggVRYVGERYGDAANT-----FT 633
|
650 660 670 680 690
....*....|....*....|....*....|....*....|....*....|....*....
gi 1221423650 562 MGGVSLWDAAVSYPVTSHLTVRGKIANLFDKDYETVYGYQT-----AGREYTLSGSYTF 615
Cdd:COG4773 634 LPSYTLVDAGARYDLGKNWTLQLNVNNLFDKKYYASSGSRGyvyygAPRNVRLSLSYKF 692
|
|
| PRK10064 |
PRK10064 |
catecholate siderophore receptor CirA; Provisional |
6-615 |
1.42e-49 |
|
catecholate siderophore receptor CirA; Provisional
Pssm-ID: 236646 [Multi-domain] Cd Length: 663 Bit Score: 182.78 E-value: 1.42e-49
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1221423650 6 SLLTALSVTAfsgwAQDSADSLVVTANRFEQPEKSVLAATSVVTREDIDRWQSTTVIDVMRRLPGVDTAQNGGmgQLSSL 85
Cdd:PRK10064 16 AISCAWPVLA----VDDDGETMVVTASAVEQNLKDAPASISVITQEDLQRKPVQNLKDVLKEVPGVQLTNEGD--NRKGV 89
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1221423650 86 FIRGTNSSHVLILVDGIRLNQAGVT---GSSDLSQFPIALVQRIEYIRGPRSAVYGSDAIGGVVNIITTRAKD------- 155
Cdd:PRK10064 90 SIRGLDSSYTLILIDGKRVNSRNAVfrhNDFDLNWIPVDAIERIEVVRGPMSSLYGSDALGGVVNIITKKIGQkwhgtvt 169
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1221423650 156 -----------GTTLNAGV--------GSHGYQNYGGSTQQTLGD--STRVTLAGDYTYTKGFdvvadgnngglaqTDRD 214
Cdd:PRK10064 170 vdttiqehrdrGDTYNGQFftsgplidGVLGMKAYGSLAKREKDDpqNSTTTDTGETPRIEGF-------------TSRD 236
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1221423650 215 GYMNKTLYGALEHTFSEqwsgfvrGYGYSNRTaydgyYSAFTPDVLVDTRQLYSQT----WDAG---LRF------NEDI 281
Cdd:PRK10064 237 GNVEFAWTPNQNHDFTA-------GYGFDRQD-----RDSDSLDKNRLERQNYSLShngrWDYGnseLKYygekveNKNP 304
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1221423650 282 FHSQLLSSYSHSKDfnydphlGRYdsTATLDEIKQYnvqwtnsvdvghgnIGAGVDWQKQSTEPNTNYVTNGYDLRNTGV 361
Cdd:PRK10064 305 GNSSPITSESNSID-------GKY--TLPLTAINQF--------------LTFGGEWRHDKLSDAVNLTGGTSSKTSASQ 361
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1221423650 362 YLTGLQK----LGDFTLEGAARSDDNSQFGRHGTWQSSAAWEFIEGYRFIASYGTAYKAPNLGQLYGYY----------- 426
Cdd:PRK10064 362 YALFVEDewriFEPLALTTGVRMDDHETYGDHWSPRAYLVYNATDTVTVKGGWATAFKAPSLLQLSPDWtsnscrgacki 441
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1221423650 427 -GNDHLDPEESKQWE-GAF----EGLTAGVSWRVSAYRNDVDNLID------------------FNNNLQ-------EYY 475
Cdd:PRK10064 442 vGSPDLKPETSESWElGLYymgeEGWLEGVESSVTVFRNDVDDRISisrtsdvnaapgyqnfvgFETNGRgrrvpvfRYY 521
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1221423650 476 NVGKARIKGVEATASFDTGPVMH-TVGYDYVDARNATT--NELLDRRAKQQVKYQLDTQIYDL-DWS--LTYHYLG-TRY 548
Cdd:PRK10064 522 NVNKARIQGVETELKIPFNDEWKlSLNYTYNDGRDVSNgeNKPLSDLPFHTANGTLDWKPLALeDWSfyVSGNYTGqKRA 601
|
650 660 670 680 690 700
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1221423650 549 DTNFGTYPyqkvkmGGVSLWDAAVSYPVTSHLTVRGKIANLFDKDYE-TVYGYQTAGREYTLSGSYTF 615
Cdd:PRK10064 602 DSATAKTP------GGYTIWNTGAAWQVTKDVKLRAGVLNLGDKDLSrDDYSYNEDGRRYFMAVDYRF 663
|
|
| TonB-hemin |
TIGR01785 |
TonB-dependent heme/hemoglobin receptor family protein; This model represents the ... |
24-615 |
3.13e-49 |
|
TonB-dependent heme/hemoglobin receptor family protein; This model represents the TonB-dependent outer membrane heme/hemoglobin receptor/transporter found in bacteria which live in contact with animals (which contain hemoglobin or other heme-bearing globins) or legumes (which contain leghemoglobin). Some species having hits to this model such as Nostoc, Caulobacter and Chlorobium do not have an obvious source of hemoglobin-like proteins in their biological niche and so the possibility exists that they act on some other substance. [Transport and binding proteins, Cations and iron carrying compounds, Transport and binding proteins, Porins]
Pssm-ID: 273807 [Multi-domain] Cd Length: 665 Bit Score: 181.82 E-value: 3.13e-49
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1221423650 24 ADSLVVTANRFEQPEKSVLAATSVVTREDIDRWQSTTVIDVMRRLPGVDtAQNGGMGQLSSLFIRGTNSSHVLILVDGIR 103
Cdd:TIGR01785 1 LDTVTVTATRTRQVLSEAPASVSVISGEQIESKQANNLADALNTVPGVD-VTGGGRPPGQSINIRGLQDNRVLVVVDGAR 79
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1221423650 104 LNQAGVTGSSDLSQFPIALVQRIEYIRGPRSAVYGSDAIGGVVNIITTRAKDGTtlnagvgsHGYQNYGGSTQQTLG--- 180
Cdd:TIGR01785 80 QNYQRGGAHNGSLFVDPELLKRIEIVKGPSSSLYGSGALGGVVAFRTKDAADLL--------RPGQLFGGLAKLSYGsnn 151
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1221423650 181 DSTRVTLAGDYTYTKGFDVVA-----DGNN-GGLAQTD--RDGYMNKTLYGALE-HTFSEQWSGFvrGYGYsNRTAYDGY 251
Cdd:TIGR01785 152 NSFGGSVAVAGRLDDNLDALVaatyrDGGNyRNGNKEEatNSAYVQKNLLAKLGwQLDDAQRLEF--SYFT-TEGSLDEA 228
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1221423650 252 YSAFTPDvlvDTRQLYSQTWDA--------GLRFNEDIFHSQLLS---SYSHSKDFNYDPHLGRYDSTATLDEIKQYNVQ 320
Cdd:TIGR01785 229 QNSGPGT---EYVLGSSSTLLAsstrdrsaTLTYNWTPEDNPWLDataSLYYNRTENDNDRSARGVGREEGYQYTTYGAT 305
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1221423650 321 WTNSVDVGHGN---IGAGVDWQKQSTEP---------NTNYVTNGYDLRNTGVYLTGLQKLGD--FTLEGAARSD----- 381
Cdd:TIGR01785 306 LQNTSRFDVASwstLTYGVDWMKDKRRTesfdpnsvtTIVPNPPSAKEYFFGLFLQDNIPLLDdrLTLSAGLRYDhykls 385
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1221423650 382 -------DNSQFGrHGTWQSSAA--WEFIEGYRFIASYGTAYKAPNLGQLYG------------YYGNDHLDPEESKQWE 440
Cdd:TIGR01785 386 pkttadtEAVDRS-YSRWSPSLGlsYKPVDWLTLYASYSQGFRAPSIDELYGtgdhpgtpggytFAPNPNLKPETSKTWE 464
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1221423650 441 -GA---FEGLTAG---VSWRVSAYRNDVDNLIDF-----------NNNLQEYYNVGKARIKGVEATASFDTGPVMHTVGY 502
Cdd:TIGR01785 465 lGAnlsFDNLLLDndqLQFKVAYFYNDVKDFIDLtigvtdnvtagMNNITQYVNIDGARIRGIEASASYDAGLWATGLSY 544
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1221423650 503 DYVDARNATTNELLDRRAKQQVKYQLDTQIYDLDWSLT---YHYlgTRYDTNFGTY---PYQKVKMGGVSLWDAAVSYPV 576
Cdd:TIGR01785 545 GYTIGKDQNTNQWLSNIPPLKLVVTVGYRFPDRRLDLGakaAYY--ERQSESPTTEdvaANGLLTTPGYTVVDLYATYQP 622
|
650 660 670 680
....*....|....*....|....*....|....*....|...
gi 1221423650 577 T--SHLTVRGKIANLFDKDYETVYGYQTA--GREYTLSGSYTF 615
Cdd:TIGR01785 623 NavKGLTVRFGVNNLTDRKYTPAQSVPGAgpGRNFKGSVKYQF 665
|
|
| Fiu |
COG4774 |
Outer membrane receptor for monomeric catechols [Inorganic ion transport and metabolism]; |
33-615 |
4.28e-48 |
|
Outer membrane receptor for monomeric catechols [Inorganic ion transport and metabolism];
Pssm-ID: 443806 [Multi-domain] Cd Length: 639 Bit Score: 178.15 E-value: 4.28e-48
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1221423650 33 RFEQPEKSVLAATSVVTREDIDRWQSTTVIDVMRRLPGVdTAQNGGMGQLSSLFIRGTNSShVLILVDGIRLNqagvtgs 112
Cdd:COG4774 1 KTDTPLLDTPQSVTVVTRELIEDQGATSLADALRNVPGV-TFGAGEGGNGDSFSIRGFSAS-GDIYVDGLRDP------- 71
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1221423650 113 sDLSQFPIALVQRIEYIRGPRSAVYGSDAIGGVVNIITTRAKDG--TTLNAGVGSHGYQ------------------NYG 172
Cdd:COG4774 72 -GQYRRDTFNLERVEVLKGPASVLYGRGSPGGVINLVTKRPTDEpfTEVTLTYGSDGQRratldvngplgddlayrlNGM 150
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1221423650 173 GSTQQT-------------------LGDSTRVTLAGDYTYTkgfDVVADG-----NNGGLAQTDRDGYMN---------- 218
Cdd:COG4774 151 YRDSDSyrdgvdndrwgiapsltwrLGDRTRLTLDYEYQDD---DRTPDYgvpavANGRPVDVDRSTFYGqpddysdset 227
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1221423650 219 KTLYGALEHTFSEQWSgFVRGYGYSNrtaYDGYYSAFTPDVLVDTRQLYSQTWDAglRFNEDIFHSQLlssyshskDFNY 298
Cdd:COG4774 228 DSATLRLEHDFNDNWT-LRNALRYSD---YDRDYRNTYPTGGNATGTVTRSAYRR--DQDNDTLSNQT--------DLTG 293
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1221423650 299 DPHLGRYDST----ATLDEIKQYNVQWTNSVDVGHGNIGAGVDWQkQSTEPNTNYVTNGYDLRNTGVYLTGLQKLGD--- 371
Cdd:COG4774 294 KFDTGGVKHTllagVEYSREDSDNARYSGGGTAPTVNLYNPVYGA-PVTGPTLGGADNDSRTDTTGLYLQDTISLTDrws 372
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1221423650 372 ---------FTLEGAARSDDNSQFGRHG---TWQSSAAWEFIEGYRFIASYGTAYkAPNLGQLYGYYGNDHLDPEESKQW 439
Cdd:COG4774 373 llaglrydrFDTDYTDRTTGATTSSYDDsafSPRAGLVYKPTPNLSLYASYSTSF-NPGGGAPSLSNAGQALDPEKSRQY 451
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1221423650 440 E-GA-FEGLTAGVSWRVSAYRNDVDNLIDFN-NNLQEYYNVGKARIKGVEATASFDTGPVMH-TVGYDYVDAR--NATTN 513
Cdd:COG4774 452 EvGVkWDLLDGRLSLTAALFRIEKTNVRTTDpANPGVYVQTGEQRSRGVELEATGELTPGWSvLAGYTYLDAEitKSANA 531
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1221423650 514 ELLDRR----AKQQ----VKYQLDTQiyDLDWSLTYHYLGTRYDTNFGTypyqkVKMGGVSLWDAAVSYPVTSHLTVRGK 585
Cdd:COG4774 532 ANVGNRlpnvPRHSaslwTTYDLPLP--GLTLGGGVRYVGSRYADAANT-----VKLPSYTRFDAGASYRLNKNLTLRLN 604
|
650 660 670
....*....|....*....|....*....|....*
gi 1221423650 586 IANLFDKDY-ETVYGYQT----AGREYTLSGSYTF 615
Cdd:COG4774 605 VNNLTDKRYyASAYGSGYvtpgAPRTVLLSASYRF 639
|
|
| FecA |
COG4772 |
Outer membrane receptor for Fe3+-dicitrate [Inorganic ion transport and metabolism]; |
2-615 |
1.05e-44 |
|
Outer membrane receptor for Fe3+-dicitrate [Inorganic ion transport and metabolism];
Pssm-ID: 443804 [Multi-domain] Cd Length: 681 Bit Score: 169.34 E-value: 1.05e-44
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1221423650 2 IKKVSLLTALSVTAFSGWAQDSADSLVVTANRF-EQPEKSVLAATSVVTREDIDRWQSTTVIDVMRRLPGVDTAQNGGMG 80
Cdd:COG4772 1 MRRALAAALLLAAAAAAEAATTLETVVVTGSRAaEARLKDVPGSVSVVDREELENQAATSLREVLRRVPGVNVQEEDGFG 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1221423650 81 QLSSLFIRGTN---SSHVLILVDGIRLNQAGVT-GSSDLSQfPIALVQRIEYIRGPRSAVYGSDAIGGVVNIITTRA--K 154
Cdd:COG4772 81 LRPNIGIRGLGprrSRGITLLEDGIPIAPAPYGdPAAYYFP-DLERMERIEVLRGAAALRYGPQTVGGAINFVTRTIptA 159
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1221423650 155 DGTTLNAGVGSHGYQNYGGSTQQTLGDstrVTLAGDYTYTKGfdvvaDG---NNGglaqTDRDGYMNKTLYgalehTFSE 231
Cdd:COG4772 160 FGGELRVTGGSFGYRRTHASVGGTVGN---FGYLVEYSRKRG-----DGfrdNSG----FDINDFNAKLGY-----RLSD 222
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1221423650 232 --QWSGFVRGYGYSNRT--------AYDGYYSAFTPDVLVDTRQL-----YSQTWDAGLRFNedifhsqlLSSYSHSKDF 296
Cdd:COG4772 223 rqELTLKFQYYDEDANTpggltdaqFDADPRQSYRPADQFDTRRTqlslrYEHQLSDNTTLT--------TTAYYNDFSR 294
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1221423650 297 NYDPHLGRYDSTATLDEIK----QYNVQ-----WTNSVDVG--HGNIGAGVDWQKQST-----EPNTNYVTNGYDLR--- 357
Cdd:COG4772 295 NWYIRQNTADPNTPGLGLRgnprGYRSYgieprLTHRFELGgvPHTLEVGLRYHREEEdrkqyVNTYGQGRSGAGLRrdr 374
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1221423650 358 -----NTGVYLTG-LQKLGDFTLEGAARSD------DNSQFGRHGTWQS------------SAAWEFIEGYRFIASYGTA 413
Cdd:COG4772 375 rfsadALAAYAQNrFELTGRLTLTPGLRYEhirrdrTDRYSTRTGGDDSgsnsyseflpglGLLYQLTDNLQLYANVSRG 454
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1221423650 414 YKAPNLGQL-YGYYGNDHLDPEESKQWEGAFEG-LTAGVSWRVSAYRNDVDNLIDFNNN----LQEYYNVGKARIKGVEA 487
Cdd:COG4772 455 FEPPTFGDLaYGNGGNPDLKPEKSWNYELGTRGrIGNGLSAEVALFYIDYDNELGSCSAaggdRSTFTNAGETRHQGLEL 534
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1221423650 488 TASFDTGPVMH-----TVGYDYVDAR--NATTNELLDRR----AKQQVKYQLDTQIYDLDWSLTYHYLGTRYDTNFGT-Y 555
Cdd:COG4772 535 ALDYDLLKGGGlglplFAAYTYTDAEftSDFGPVFAGNRlpyvPRHQLTAGLGYEHGGWTANLNGRYVSEQFTDAANTvA 614
|
650 660 670 680 690 700
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1221423650 556 PYQKVKMGGVSLWDAAVSYPVTSHLTVRGKIANLFDKDYET------VYGYQTA-GREYTLSGSYTF 615
Cdd:COG4772 615 DGSFGKIPSYTVLDLSASYDFGKNLSLFAGVNNLFDKRYIAsrapnyAAGIRPGpPRTVYAGLRLKF 681
|
|
| TonB-hemlactrns |
TIGR01786 |
TonB-dependent hemoglobin/transferrin/lactoferrin receptor family protein; This model ... |
25-615 |
2.76e-44 |
|
TonB-dependent hemoglobin/transferrin/lactoferrin receptor family protein; This model represents a family of TonB-dependent outer membrane receptor/transporters acting on iron-containing proteins such as hemoglobin, transferrin and lactoferrin. Two subfamily models with a narrower scope are contained within this model, the heme/hemoglobin receptor family protein model (TIGR01785) and the transferrin/lactoferrin receptor family model (TIGR01776). Accessions which score above trusted to this model while not scoring above trusted to the more specific models are most likely to be hemoglobin transporters. Nearly all of the species containing trusted hits to this model have access to hemoglobin, transferrin or lactoferrin or related proteins in their biological niche. [Transport and binding proteins, Cations and iron carrying compounds, Transport and binding proteins, Porins]
Pssm-ID: 273808 [Multi-domain] Cd Length: 715 Bit Score: 168.36 E-value: 2.76e-44
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1221423650 25 DSLVVTANRFEQPE----KSVLAATSVVTREDIDRWQSTTVIDVMRRLPGVDTAQnGGMGQLSSLFIRGTNSSHVLILVD 100
Cdd:TIGR01786 1 DTITVTATRTADPQrrdlSVTPASVSVISREQLKSQQVRNLRDLLRYEPGVSVVE-GGRGGSQGINIRGLDKNRVAVLVD 79
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1221423650 101 GIRLNQ----AGVTGSSDLSqFPIALVQRIEYIRGPRSAVYGSDAIGGVVNIITTRAKDGTTLNAGVGSHGYQNYGGSTQ 176
Cdd:TIGR01786 80 GIRQNTsyggQGSTFYAINS-IDPELIKSIEIVKGASSSLYGSGALGGVVAFRTKDAADLLKPGKDLGGLSKLGYSSANN 158
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1221423650 177 QTLGDST------RVTLAGDYTYTKGFDVVADGNNGGLAQTDRD-----GYMNKTLYGALEHTFSEQWS-GFVRGYGYSN 244
Cdd:TIGR01786 159 RFTQSVAaagrndDVDALVQATYRRGHELKNGNKANIGNESKRSkpnpsDYKSQSFLAKLGWQLNDAHRlGLSLEYTQTD 238
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1221423650 245 RTAYDGYYSAFTPDVLVDTRQLY------SQTWDA--GLRF-----NEDIFHSQLLSSYSHSKDFNYDPHLGRYDSTaTL 311
Cdd:TIGR01786 239 YDEPEMTNTSYLTKPLGAPLLSStvvlgdSKTRDRrtGLDYelnpdNSWLDTVKLALDKQYIQLYNYLNATSASDYP-GV 317
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1221423650 312 DEIKQYNvQWTNSV------------DVGHGNIGAGVDWQKQSTEPN---TNYVTNGYDL------------RNTGVYLT 364
Cdd:TIGR01786 318 DKNGRYK-DKYDYYtlgfdtnnkiefSVHSLSLTYGLDRFKDKVSTGdsrRNLPTAAYNLygyegenrpvkgSNFGLFLQ 396
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1221423650 365 GLQKLGD-FTLEGAARSDDNSQFG---------------RHGTWQSSAAWEFIEGYRFIASYGTAYKAPNLGQLYGYY-- 426
Cdd:TIGR01786 397 DNIKLGDwLSLSAGLRYDHYKTDPkadeskdygaisktySRWSPSLGLTYKPTPWLTLYYSYSQGFRAPSFDELYGTGah 476
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1221423650 427 ---------GNDHLDPEESKQWEGAFEGLTAGVSWRVSAYRNDVDNLID--------------FNNNLQEYYNVGKARIK 483
Cdd:TIGR01786 477 pgggpytflPNPNLKPETSKNWEIGINLHFDQLDFKVSYFRNDYKDFIDlgigvtakgnmaqvGSNTITNYVNIDNARIR 556
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1221423650 484 GVEATASFDTGPVMH-------TVGYDYVDARNATTNELLD----RRAKQQVKYQLDTQIYDLDWSLTyHYLGTRYDTNF 552
Cdd:TIGR01786 557 GIELSGRYDLGSFFSgpdgwttTLKYGYTKGKDSDTNPWLNaitpLKVVLGLGYDHPDEKWGVGLTLT-FSGAKDAVDAY 635
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1221423650 553 GTYPYQKVKMGGVS-------LWDAAVSYPVTSHLTVRGKIANLFDKDY----------ETVYGYQTAGREYTLSGSYTF 615
Cdd:TIGR01786 636 ATYYENGEAAKAGPlrtpsytVVDLYGYYKPNKNLTLRFGVYNLLDRKYttwesarqagPLATGYTAPGRNYKASVEYKF 715
|
|
| PRK13483 |
PRK13483 |
ligand-gated channel protein; |
5-615 |
5.22e-42 |
|
ligand-gated channel protein;
Pssm-ID: 184080 [Multi-domain] Cd Length: 660 Bit Score: 161.10 E-value: 5.22e-42
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1221423650 5 VSLLTALS-VTAFSGWAQDSADS----LVVTANRFEQPEKSVLAATSVVTREDIDRWQSTTVIDVMRRLPGVdTAQNGGM 79
Cdd:PRK13483 9 ISALCLLPaVFVTHALAQAAPDKtmetVVVTASGYEQQIRDAPASISVITREDLENRFYRDLTDALLDVPGV-VVTGGGD 87
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1221423650 80 GQLSSLfiRGTNSSHVLILVDGIRLNQAGVTGSSDLSQF------PIALVQRIEYIRGPRSAVYGSDAIGGVVNIITTRA 153
Cdd:PRK13483 88 RTDISL--RGMGSQYTLILVDGKRQSSRETRPNSDGPGVeqawtpPLAAIERIEVIRGPMSSLYGSDAIGGVINIITRKV 165
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1221423650 154 KD--------GTTL----------------NAGVGSH--GYQNYGGSTQQTLGD---------STRVTLAGDYTYTKGFD 198
Cdd:PRK13483 166 PNewqgevrlDTTLqensdsgnvyqanffvNGPLIKDllGLQLYGQYTQREEDDieggyrdkdARSLTAKLALTPNEDHD 245
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1221423650 199 VVADgnnGGLAQTDRDGYMNKTLYGALEHTFSEQwsgfvRGYGYSNRTAYDGYYSAFTpdvlvdtrqlYSQTWDAGlrfn 278
Cdd:PRK13483 246 IMLE---VGTSNQERDSTVGKTVAPLAPGESCGR-----RGCPESSTTEYERSTVSLS----------HTGRWDFG---- 303
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1221423650 279 edifhsqllSSYSHSKdfnYDphlgRYDSTATLDEIKQYNVQ--WTNSVDVGHgNIGAGVDWQKQSTEPNT-NYVTNGYD 355
Cdd:PRK13483 304 ---------TSDTYIQ---HE----EFDNKSREMKIKNTDFQssLVAPLGQEH-TLTFGAAYNHQDLTDETsNQISDLTD 366
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1221423650 356 LRNT--GVYLTGLQKLG-DFTLEGAARSDDNSQFGRH------GTWQSSAAWEFIEGyrfiasYGTAYKAPNL------- 419
Cdd:PRK13483 367 ISRTqwAVFSEDEWRIAdDFALTGGLRLDHDENFGGHvsprvyGVWNLAPSWTVKGG------VSTGFRAPSLrqttpdw 440
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1221423650 420 GQLYG---YYGNDHLDPEESKQWE-GAFEGLTAGVSWRVSAYRNDVDNLI---------------DFNNNLQEYYNVGKA 480
Cdd:PRK13483 441 GQVSRggnIYGNPDLKPETSLNKElGLYYDLGSGLTASLTVFYNEFKDKItrvacpatqctdgpnQFGADPTTYVNIDEA 520
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1221423650 481 RIKGVEATASFD-TGPVMHTVGYDYVDARNaTTNELLDRRAKQQVKYQLDTqiyDLDWSLT--------YHYLGTRYDTN 551
Cdd:PRK13483 521 VTQGVEASLSYPiTSTLSLSGNYTYTDSEQ-KSGAYKGSPLNQLPKHLFQA---SLNWEPTdrlnswarVNYRGEESQPT 596
|
650 660 670 680 690 700
....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1221423650 552 FGtyPYQ-KVKMGGVSLWDAAVSYPVTSHLTVRGKIANLFDKDY-ETVYGYQTAGREYTLSGSYTF 615
Cdd:PRK13483 597 TG--PSSsSFIAPSYTFLDLGANYQLTDNLKLSAGIYNLFDKEInYEEYGYVEDGRRYWLGMTYSF 660
|
|
| TonB-siderophor |
TIGR01783 |
TonB-dependent siderophore receptor; This subfamily model encompasses a wide variety of ... |
44-615 |
6.77e-42 |
|
TonB-dependent siderophore receptor; This subfamily model encompasses a wide variety of TonB-dependent outer membrane siderophore receptors. It has no overlap with TonB receptors known to transport other substances, but is likely incomplete due to lack of characterizations. It is likely that genuine siderophore receptors will be identified which score below the noise cutoff to this model at which point the model should be updated. [Transport and binding proteins, Cations and iron carrying compounds, Transport and binding proteins, Porins]
Pssm-ID: 273805 [Multi-domain] Cd Length: 651 Bit Score: 160.66 E-value: 6.77e-42
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1221423650 44 ATSVVTREDIDRWQSTTVIDVMRRLPGVDTAQNGGMGQLSSLFIRGTNSShvlILVDGIRLNQAGVTGSSDLSQFPIALV 123
Cdd:TIGR01783 5 SVSVITRQELEDQQAGSLSEALQRVPGVVVGGSGGTTQFGNITIRGFGLE---VDIDNVYLDGVPLLSRGNLAIVDPAMV 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1221423650 124 QRIEYIRGPRSAVYGSDAIGGVVNIITTRAKD--GTTLNAGVGSHGYQNYGGSTQQTLGDSTRVTLAGDYTYTKG---FD 198
Cdd:TIGR01783 82 ERVEVLRGPASLLYGGSAPGGVINIVTKRPQDepKGSVTFGAGTRSGYRTAFDLGGPLGADGTFRGRLNGARQDGdsfYD 161
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1221423650 199 VVADGNNGGLAQTD--RDGYMNKTL---YGALEHTFSEQWSGFVRGyGYSNRTAYDGYYSAfTPDVLVDTRQLYSQTWDA 273
Cdd:TIGR01783 162 GAGEETRLGATATDwqLDDRTLLRLgayYQKERDRGGYGGLPASGG-TSGRDLSSDRYLGT-SSNRNYDDREYLSYGLSL 239
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1221423650 274 GLRFNEDIFHSQLLSsYSHSKDFNYDPHLGRYDSTATLDEIKQYNV---QWTNSVDVGHG----------NIGAGVDWQK 340
Cdd:TIGR01783 240 EYQFNDVWTGKQNLR-YSYFDTDSNQVQASGYSSDGGLFGRSLTVVnvkQDRVQIDAGLDgefetgpiehDLLLGVSYGQ 318
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1221423650 341 QSTEPNTNYVTNGYDLRN---------------------------TGVYLTGLQKLGDFTLEGAARSDDNSQFGRHG--- 390
Cdd:TIGR01783 319 RTTNRFNNTGYPSDNIYSltatssartdigdspkdralssttkalNGVALQRILLADKWTLTLGGRYDSVDVKSNNGvag 398
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1221423650 391 ----------TWQSSAAWEFIEGYRFIASYGTAYKAPNLGQLYGYYGNDHLDPEESKQWEGAFEG-----LTAGVSWrvs 455
Cdd:TIGR01783 399 stgkrddsqfTPSLGVAYKPTDDWSLYASYAESFKPGGYYPKGAGNSGDILEPEKGKNYELGVRYdlgdsLLATAAL--- 475
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1221423650 456 aYRNDVDNLID-FNNNLQEYYNVGKARIKGVEATASFDTGP-VMHTVGYDYVDAR------NATTNELLDRRAKQQVKYQ 527
Cdd:TIGR01783 476 -FRITKDNQLVqDPVNGTFSVNAGKTRNRGVELEARGYLTPgLSLSAGYTYTDAEftedtnGDTQGNTVPFVPKHTASLW 554
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1221423650 528 LDTQIYDLDWSLTYhYLGTRYDTNFGTYPYQKVKMGGVSLWDAAVSYPVTS--HLTVRGKIANLFDKDYETVYGYQT--- 602
Cdd:TIGR01783 555 ASYAPPVGDNGLTL-GGGVQYTGKAYVDGGNTGKVPSYTVVDLSVRYDLTKkkNLTLALNVNNLFDRDYYTSGYRWGpsa 633
|
650
....*....|....*...
gi 1221423650 603 -----AGREYTLSGSYTF 615
Cdd:TIGR01783 634 yiypgAPRTVGLSVSYDF 651
|
|
| PRK13486 |
PRK13486 |
TonB-dependent receptor; |
7-613 |
1.06e-41 |
|
TonB-dependent receptor;
Pssm-ID: 139606 [Multi-domain] Cd Length: 696 Bit Score: 160.57 E-value: 1.06e-41
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1221423650 7 LLTALSVTAFSgwAQDSADSLVVTANRFEQPEKSVLAATSVVTREDIDRWQSTTVIDVMRRLPGVD----TAQNGGMgql 82
Cdd:PRK13486 10 VIPCLGFSASS--IAAAEDVMIVSASGYEKKLTNAAASVSVISQEELQSSQYHDLAEALRSVEGVDvesgTGKTGGL--- 84
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1221423650 83 sSLFIRGTNSSHVLILVDGIRLNqagvtGSSDLS-----------QFPIALVQRIEYIRGPRSAVYGSDAIGGVVNIITT 151
Cdd:PRK13486 85 -EISIRGMPASYTLILIDGVRQG-----GSSDVTpngfsamntgfMPPLAAIERIEVIRGPMSTLYGSDAMGGVVNIITR 158
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1221423650 152 RAKD--GTTLNAGVGSHGYQNYG-----------------------GSTQQTLGDS---------TRV---TLAGDYTYT 194
Cdd:PRK13486 159 KNADkwLSSVNAGLNLQESNKWGnssqfnfwssgplvddsvslqvrGSTQQRQGSSvtslsdtaaTRIpypTESQNYNLG 238
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1221423650 195 KGFDVVADGNNGGLAQTD--------RDGYMNkTLYGALEHTFSeqwsgfvrgygYSNRTAYDGYYSAFTpdvlvdtrql 266
Cdd:PRK13486 239 ARLDWKASEQDVLWFDMDttrqrydnRDGQLG-SLTGGYDRTLR-----------YERNKISAGYDHTFT---------- 296
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1221423650 267 ySQTWDAGLRFNEDIFHSQLLSSYSHSKDfnydphlgRYDSTATLDEIKQYNVQWTNSVDVGHGN---IGAGVDWQKQST 343
Cdd:PRK13486 297 -FGTWKSYLNWNETENKGRELVRSVLKRD--------KWGLAGQPRELKESNLILNSLLLTPLGEshlVTVGGEFQSSSM 367
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1221423650 344 EPNTNYVTNGYDLRNT--GVYLTGLQKLGD-FTLEGAARSDDNSQFGRHGTWQSSAAWEFIEGYRFIASYGTAYKAPNLG 420
Cdd:PRK13486 368 KDGVVLASTGETFRQKswSVFAEDEWHLTDaLALTAGSRYEHHEQFGGHFSPRAYLVWDVADAWTLKGGVTTGYKAPRMG 447
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1221423650 421 QLY------------GYYGNDHLDPEESKQWEGAF-----EGLTAGVSWRVSAYRNDVDNLiDFNNNLQEYYNVGKARIK 483
Cdd:PRK13486 448 QLHkgisgvsgqgktNLLGNPDLKPEESVSYEAGVyydnpAGLNANVTGFMTDFSNKIVSY-SINDNTNSYVNSGKARLH 526
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1221423650 484 GVEATASFD--TGPVMHTVGYDYVDARNATTNEL---LDRRAKQQVKYQLDTQIY-DLDWSLTYHYLGT--RYDTNFGTY 555
Cdd:PRK13486 527 GVEFAGTLPlwSEDVTLSLNYTWTRSEQRDGDNKgapLSYTPEHMVNAKLNWQITeEVASWLGARYRGKtpRFTQNYSSL 606
|
650 660 670 680 690 700
....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1221423650 556 P--YQKV---KMGGVSLW---DAAVSYPVTSHLTVRGKIANLFDKDYETVYGYQtAGREYTLSGSY 613
Cdd:PRK13486 607 SavQKKVydeKGEYLKAWtvvDAGLSWKMTDALTLNAAVNNLLNKDYSDVSLYS-AGKSTLYAGDY 671
|
|
| PRK13513 |
PRK13513 |
ligand-gated channel protein; |
8-615 |
2.15e-39 |
|
ligand-gated channel protein;
Pssm-ID: 184104 [Multi-domain] Cd Length: 659 Bit Score: 153.39 E-value: 2.15e-39
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1221423650 8 LTALSVTAFSGWAQDSA---DSLVVTANRFEQPEKSVLAATSVVTREDIDRWQSTTVIDVMRRLPGVDTAqngGMGQLSS 84
Cdd:PRK13513 16 AAAISSQAYAAEKTNTAtptDTMVVTASGFQQRIQDAPASISVVTREQLENKAYRDVTDALKDVPGVVVT---GGGSTSD 92
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1221423650 85 LFIRGTNSSHVLILVDGIRLNQAGVTGSSDLSQF------PIALVQRIEYIRGPRSAVYGSDAIGGVVNIITTRAKDGtt 158
Cdd:PRK13513 93 ISIRGMAAKYTLILVDGKRVDTRSTRPNSDGSGIeqgwlpPLAAIERIEVVRGPMSSLYGSDAMGGVINIITRKVQKE-- 170
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1221423650 159 lnagvgshgyqnYGGStqqtlgdstrvtLAGDYTYTKgfdvvaDGNNGGLAQTDR-------DGYMNKTLYGALEHTFSE 231
Cdd:PRK13513 171 ------------WHGS------------LRADATLQE------DSKSGDIFQTNAyasgpliDGLLGLKVSGLLSHRSED 220
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1221423650 232 QwsgFVRGYGySNRTAYDGYYSAFTPDvlvDTRQLysqTWDAGlRFNED-------IFHSQLLSSYSHSKDFNYD-PHLG 303
Cdd:PRK13513 221 K---IIDGYN-EQRMRNGTATFSLTPD---DNNEF---DFEIG-RYVQDrnstpgrTLALNGTNSDTQYDRNNYAiTHNG 289
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1221423650 304 RYD-----STATLDEI-------KQYNVQWTN--SVDVGHGNIGAGVDWQKQSTEPNTNYVTNGYDLRNTGVYLTGL--- 366
Cdd:PRK13513 290 YYDfgnstSYIQRDETrnpsrqmKSVDTIFNTqtSFLLDDHTLSLGGQYRYEELYDKGNQLPSASDLNKLTRWSWALfae 369
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1221423650 367 ---QKLGDFTLEGAARSDDNSQFGRHGTWQSSAAWEFIEGYRFIASYGTAYKAPNL-------GQLYG-------YYGND 429
Cdd:PRK13513 370 dewQMTNDFALTGGIRMDQDQNYGTHWTPRLYGVWHLADQWTLKGGVSTGYRSPDLrqatdnwGQLTGggglpalILGNS 449
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1221423650 430 HLDPEESKQWEGAF-----EGLTAGVSW-------RVSAYRN----DVDNLIDFNNN----LQEYYNVGKARIKGVEATA 489
Cdd:PRK13513 450 DLKPEKSISQEIGIlwdnqENLNASVTLfntdfkdKITEVRNcdttNTDGQCVFNGInydfISDRINVDKANMRGVEATF 529
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1221423650 490 SFDTGPVMHTVG-YDYVDARNATTN---ELLDRRAKQQVKYQLDTQIY-DLD-WSL------TYHYLgTRYDTNFGTYPY 557
Cdd:PRK13513 530 NWDINQAWSLATnYTFTQSEQKSGAfagQPLNQMPKHMANATLNWQTTeDFAtWIRinyrgkTSEYL-NRTSMGSGTPSY 608
|
650 660 670 680 690 700
....*....|....*....|....*....|....*....|....*....|....*....|
gi 1221423650 558 QKVkmggvslwDAAVSYPVTSHLTVRGKIANLFDK--DYETvYGYQTAGREYTLSGSYTF 615
Cdd:PRK13513 609 TFV--------DLGASYQLTKELRLMGGVYNLLDKrvDIDV-NDKVLDGRRYMVGASYDF 659
|
|
| PRK13524 |
PRK13524 |
FepA family TonB-dependent siderophore receptor; |
1-615 |
4.63e-36 |
|
FepA family TonB-dependent siderophore receptor;
Pssm-ID: 237410 [Multi-domain] Cd Length: 744 Bit Score: 144.40 E-value: 4.63e-36
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1221423650 1 MIKKVSLLTALSVT-----AFSGWAQDSA---------DSLVVTAnrfEQPEKSVLAaTSVVTREDID-RWQSTTVIDVM 65
Cdd:PRK13524 1 MNKKIHSLALLVNLgiygvAQAAEAEDAKtddtpasheDTIVVTA---AEQNLQAPG-VSTITAEDIRkRPPANDVSEII 76
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1221423650 66 RRLPGVDTAQNGGMGQLSS---LFIRGTNSSHVLILVDG--------IRLNQAGVTGS-SDLSQFPIALVQRIEYIRGPR 133
Cdd:PRK13524 77 RTMPGVNLTGNSTSGQRGNnrqIDIRGMGPENTLILIDGkpvssrnsVRYGWRGERDTrGDTNWVPPEMIERIEVLRGPA 156
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1221423650 134 SAVYGSDAIGGVVNIITTRAKDGTTlnagvGS-HGYQN-----YGGSTQQT-------LGDSTRVTLAGDYTYT------ 194
Cdd:PRK13524 157 AARYGNGAAGGVVNIITKKPTGEWH-----GSwNTYFNapehkAEGATKRTnfslsgpLGDELSFRLYGNLNKTqadawd 231
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1221423650 195 --KGFDVVADGNNGGLAQTDRDGYMNKTLYGALEHTFSEQWS-GFvrGYGYSNR-TAYDGYYSAFTPDVLVD------TR 264
Cdd:PRK13524 232 inQGHQSARTGSYAGTLPAGREGVINKDINGLLRWDFAPLQSlEL--EAGYSRQgNLYAGDTQNTNSDALVKslygkeTN 309
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1221423650 265 QLYSQT--------WDAGLRFNedifhSQLLSSYSHSKDFN----------YDPHLGRYdSTATLDEIK---QYNVQWTN 323
Cdd:PRK13524 310 RMYRQNyalthrggWDNGVSTS-----NYAQYEHTRNSRLPeglaggtegiFNEKATQF-STIDLDDVMlhsEVNLPFDL 383
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1221423650 324 SVDvghGNIGAGVDWQKQS-TEP--NTNYVTNGYDL--------------RNTGVYLTGLQKLGDFT-LEGAARSDDNSQ 385
Cdd:PRK13524 384 LVN---QTLTLGTEWNQQRmKDPssNTQALTSGGAIpgvsatgrspyskaEIFSLFAEDNMELTDSTmLTPGLRFDHHSI 460
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1221423650 386 FGRHgtWQSS--AAWEFIEGYRFIASYGTAYKAPNLGQL---YGYY-----------------GNDHLDPEESKQWEGAF 443
Cdd:PRK13524 461 VGNN--WSPSlnLSQGLGDDFTLKMGIARAYKAPNLYQTnpnYILYskgqgcyasagngcylqGNDDLKAETSVNKEIGL 538
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1221423650 444 E----GLTAGVSWrvsaYRNDVDNLI-----------DFNNNLQEYYNVGKARIKGVEATASFDTGP-VMHTVGYDY-VD 506
Cdd:PRK13524 539 EfkrdGWLAGLTW----FRNDYRNKIeagyvpvgtnsVGKTDIYQWENVPKAVVEGLEGTLNVPVSEtVNWTNNLTYmLQ 614
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1221423650 507 ARNATT------------NELLDRRAKQQVKYQLDTQIYDLDWSLTYHYLGTRYDTNfgtypyQKVKMGGVSLWDAAVSY 574
Cdd:PRK13524 615 SKNKTTgdplsiipeytlNSTLSWQATEDLSLQSTFTWYGKQKPKKYNYKGQPVTGS------ATKEVSPYSIVGLSATY 688
|
730 740 750 760
....*....|....*....|....*....|....*....|.
gi 1221423650 575 PVTSHLTVRGKIANLFDKDYETVYGYQTAGREYTLSGSYTF 615
Cdd:PRK13524 689 DVTKNVSLTGGVDNLFDKRLWREGNAQTTGDLIAGAGAYTY 729
|
|
| PRK13528 |
PRK13528 |
outer membrane receptor FepA; Provisional |
5-615 |
5.82e-36 |
|
outer membrane receptor FepA; Provisional
Pssm-ID: 237413 [Multi-domain] Cd Length: 727 Bit Score: 143.74 E-value: 5.82e-36
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1221423650 5 VSLLTALSVTAFSGWAQDSADSLVVTANRfEQPEKSVLAaTSVVTREDIDRWQSTT-VIDVMRRLPGVDTAQNGGMGQLS 83
Cdd:PRK13528 15 LLVGLNSPVSAAESSDDDNGETMVVEATA-EQELKQQPG-VSIITAEDIKKRPPVNdLSDIIRKMPGVNLTGNSASGTRG 92
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1221423650 84 S---LFIRGTNSSHVLILVDG--------IRLNQAGVTGS-SDLSQFPIALVQRIEYIRGPRSAVYGSDAIGGVVNIITT 151
Cdd:PRK13528 93 NnrqIDIRGMGPENTLILIDGvpvtsrnsVRYSWRGERDTrGDTNWVPPEMVERIEVIRGPAAARYGSGAAGGVVNIITK 172
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1221423650 152 RAKDGTTlnagvGSHGY------QNYGGSTQQT--------LGDSTRVTLAGDYTYTKGFDVVADGNNGGLAQTDRDGYM 217
Cdd:PRK13528 173 RPTNDWH-----GSLSLytnqpeSSKEGATRRAnfslsgplAGDALTMRLYGNLNKTDADSWDINSSAGTKNAAGREGVR 247
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1221423650 218 NKTLYGALEHTFSEQwSGFVRGYGYS---NRTAYDGYYSAFT--PDVLVD----TRQLYSQTWDAGLRFNEDIFHSQLLS 288
Cdd:PRK13528 248 NKDINGVLSWKMTPQ-QILDFEAGYSrqgNIYAGDTQNSNSSavTESLAKsgkeTNRLYRQNYGLTHNGIWDWGQSRLGF 326
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1221423650 289 SYSHSKDFNYDPHL-----GRYDSTATLDEIKQYNVQWTNSVDVG-----HGNIGAGVDWQKQSTE-PN-TNYVTNGYDL 356
Cdd:PRK13528 327 YYEKTNNTRMNEGLagggeGRITADQTFTTSRLESYRTSGELNVPlnwlfEQTLTVGAEWNRDELNdPSsTSLTVKDGDI 406
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1221423650 357 ----------------RNTGVYLT-GLQKLGDFTLEGAARSDDNSQFGrhGTWQSS--AAWEFIEGYRFIASYGTAYKAP 417
Cdd:PRK13528 407 ggisgsaadrssknksEISALYVEdNIEPVPGTNLIPGLRFDYHSEFG--SNWSPSlnLSQELGDYFKVKAGIARAFKAP 484
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1221423650 418 NLGQ------LY-------------GYY--GNDHLDPEESKQWEGAFE----GLTAGVSWRVSAYRN------DVDNLID 466
Cdd:PRK13528 485 NLYQssegylLYsrgngcpkditsgGCYlvGNKNLDPEISVNKEIGLEftvdDYHASVTYFRNDYQNkivagdDVIGRTA 564
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1221423650 467 FNNNLQEYYNVGKARIKGVEATASFdtgPVMHtvgyDYVDAR-NA---------------------TTNELLDRRAKQQV 524
Cdd:PRK13528 565 SGAYILQWQNGGKAVVEGLEGNLLV---PLMK----DRLNWNtNAtymitseqkdtgnplsvipkyTINSTLDWQITQAL 637
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1221423650 525 KYQLDTQIYDLDWSLTYHYLGTRYDTNFGTYpyqkvKMGGVSLWDAAVSYPVTSHLTVRGKIANLFDKD-YETVYG---Y 600
Cdd:PRK13528 638 SANVNWTLYGKQKPRTHAESRSEETGGLSGK-----ELGAYSLVGVNVNYDINKNLRLNVGVSNLFDKQiYREGEGantY 712
|
730
....*....|....*
gi 1221423650 601 QTAGREYTLSGSYTF 615
Cdd:PRK13528 713 NEPGRAYYAGVTASF 727
|
|
| TonB_dep_Rec |
pfam00593 |
TonB dependent receptor; This model now only covers the conserved part of the barrel structure. |
235-614 |
1.89e-34 |
|
TonB dependent receptor; This model now only covers the conserved part of the barrel structure.
Pssm-ID: 395474 [Multi-domain] Cd Length: 475 Bit Score: 136.82 E-value: 1.89e-34
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1221423650 235 GFVRGYGYSNRTAYDGYYSAFTPDVLVDTRQLYSQTWDAGLRFNEDIFHS-QLLSSYSHSKDFNYDPHLG---------- 303
Cdd:pfam00593 31 GLTLDGYGNDGGYLGDRPLYYGRDYSDTDRKRLSLGYDYDLGDGLSWLSTlRLGLRYSSLDGDYTSNSSGlsgagdylsd 110
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1221423650 304 -RYDSTATLDEIKQYNVQWTNSVDVGHGNIGAGVDWQKQSTEPNTNY--------VTNGYDLRNTGVYLTGLQKLGD-FT 373
Cdd:pfam00593 111 dRLYGLYGLDGDLELSLDLSHDLLLGVELRTAGLDYRRLDDDAYDPYdpanpsssSYSDTTTDSYGLYLQDNIKLTDrLT 190
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1221423650 374 LEGAARSDDNSQFGRHG--------------TWQSSAAWEFIEGYRFIASYGTAYKAPNLGQLYGY----------YGND 429
Cdd:pfam00593 191 LTLGLRYDHYSTDGDDGngggdnfsrsysafSPRLGLVYKPTDNLSLYASYSRGFRAPSLGELYGSgsgggggavaGGNP 270
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1221423650 430 HLDPEESKQWEGAFEGLTAGVSWRVSAYRNDVDNLI-------DFNNNLQEYYNVGKARIKGVEATASFDT-GPVMHTVG 501
Cdd:pfam00593 271 DLKPETSDNYELGLKYDDGRLSLSLALFYIDIKNLItsdpdgpGLGGTVYTYTNVGKARIRGVELELSGRLwGLGLSGGG 350
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1221423650 502 YDYVDARNA----TTNELLDRRAKQQ----VKYQLDTQIYDLDWSLTYHYLGTRYDTNFGTYPYQkvkmGGVSLWDAAVS 573
Cdd:pfam00593 351 YTYTDADDDadadDTGNPLPNVPRHTanlgLTYDFPLGGWGARLGARYVGSGERRYGDAANTFKT----PGYTLVDLSAG 426
|
410 420 430 440
....*....|....*....|....*....|....*....|....*....
gi 1221423650 574 YPVTSHLTVRGKIANLFDKDYETVY--------GYQTAGREYTLSGSYT 614
Cdd:pfam00593 427 YRLNKNLTLRLGVNNLFDKYYKRYYssgggnlgGYPGPGRTFYLGLSYK 475
|
|
| Plug |
pfam07715 |
TonB-dependent Receptor Plug Domain; The Plug domain has been shown to be an independently ... |
37-145 |
3.41e-30 |
|
TonB-dependent Receptor Plug Domain; The Plug domain has been shown to be an independently folding subunit of the TonB-dependent receptors. It acts as the channel gate, blocking the pore until the channel is bound by ligand. At this point it under goes conformational changes opens the channel.
Pssm-ID: 462243 [Multi-domain] Cd Length: 107 Bit Score: 114.29 E-value: 3.41e-30
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1221423650 37 PEKSVLAATSVVTREDIDRWQSTTVIDVMRRLPGVdTAQNGGMGQLSSLFIRGTNSSHVLILVDGIRLNQAGvTGSSDLS 116
Cdd:pfam07715 1 DLRDTPGSVSVVTAEDIEDQGATNLADALRGVPGV-SVSSGGGGGGSSISIRGFGSNRVLVLVDGVPLNSGG-GGSVDLN 78
|
90 100
....*....|....*....|....*....
gi 1221423650 117 QFPIALVQRIEYIRGPRSAVYGSDAIGGV 145
Cdd:pfam07715 79 SIDPEDIERVEVLKGPASALYGSGAIGGV 107
|
|
| PRK13484 |
PRK13484 |
IreA family TonB-dependent siderophore receptor; |
5-548 |
3.44e-29 |
|
IreA family TonB-dependent siderophore receptor;
Pssm-ID: 139605 [Multi-domain] Cd Length: 682 Bit Score: 122.81 E-value: 3.44e-29
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1221423650 5 VSLLTALSVTAFSGWAQDSADSLVVTANRFEQPEKSVLAATSVVTREDIDRWQSTTVIDVMRRLPGVDTAQNGGMGQLSs 84
Cdd:PRK13484 11 IAVMCSAVISSGYASSDKKEDTLVVTASGFTQQLRNAPASVSVITSEQLQKKPVSDLVDAVKDVEGISITGGNEKPDIS- 89
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1221423650 85 lfIRGTNSSHVLILVDGIRLN--QAGVTGSSDLSQF---PIALVQRIEYIRGPRSAVYGSDAIGGVVNIITTRAKDGTTl 159
Cdd:PRK13484 90 --IRGLSGDYTLILVDGRRQSgrESRPNGSGGFEAGfipPVEAIERIEVIRGPMSSLYGSDAIGGVINIITKPVNNQTW- 166
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1221423650 160 nagvgsHGYQNYGGSTQQT--LGDSTR--VTLAGDYTYTK-GFDVVADGNnggLAQTDRDGYM-----NKTLYGALEHTF 229
Cdd:PRK13484 167 ------DGVLGLGGIIQEHgkFGNSTTndFYLSGPLIKDKlGLQLYGGMN---YRKEDSISQGtpakdNKNITATLQFTP 237
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1221423650 230 SEQWSgFVRGYGYSN--RTAYDG-YYSAFT-------PDVLVDTRQLYSQtWDAGLRFNEDIFHSQL------------- 286
Cdd:PRK13484 238 TESQK-FVFEYGKNNqvHTLTPGeSLDAWTmrgnlkqPNSKRETHNSRSH-WVAAWNAQGEILHPEIavyqekvirevks 315
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1221423650 287 --LSSYSHSkDFNYDPHlgRYDSTATLDEIKQYNVQWTNSVDVG----HGNIGAGVDWQKQSTEpntnyvTNGYDLRNTG 360
Cdd:PRK13484 316 gkKDKYNHW-DLNYESR--KPEITNTIIDAKVTAFLPENVLTIGgqfqHAELRDDSATGKKTTE------TQSVSIKQKA 386
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1221423650 361 VYLTGLQKLGD-FTLEGAARSDDNSQFGRHGTWQSSAAWEFIEGYRFIASYGTAYKAPNLGQL---YG---------YYG 427
Cdd:PRK13484 387 VFIENEYAATDsLALTGGLRLDNHEIYGSYWNPRLYAVYNLTDNLTLKGGIAKAFRAPSIREVspgFGtltqggasiMYG 466
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1221423650 428 NDHLDPEESKQWEGAF-----EGLTAGVSWRVSAYRNDVDNL----ID--FNNNLQEYYNVGKARIKGVEATASFDTGPV 496
Cdd:PRK13484 467 NRDLKPETSVTEEIGIiysndSGFSASATLFNTDFKNKLTSYdigtKDpvTGLNTFIYDNVGEANIRGVELATQIPVYDK 546
|
570 580 590 600 610 620
....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1221423650 497 MH-TVGYDYVDARNATTNEL----------LDRRAKQQVKYQLDTQiYDLDWSLtyhYLGTRY 548
Cdd:PRK13484 547 WHvSANYTFTDSRRKSDDESlngkslkgepLERTPRHAANAKLEWD-YTQDITF---YSSLNY 605
|
|
| OMP_RagA_SusC |
TIGR04056 |
TonB-linked outer membrane protein, SusC/RagA family; This model describes a distinctive clade ... |
36-158 |
5.26e-10 |
|
TonB-linked outer membrane protein, SusC/RagA family; This model describes a distinctive clade among the TonB-linked outer membrane proteins (OMP). Members of this family are restricted to the Bacteriodetes lineage (except for Gemmatimonas aurantiaca T-27 from the novel phylum Gemmatimonadetes) and occur in high copy numbers, with over 100 members from Bacteroides thetaiotaomicron VPI-5482 alone. Published descriptions of members of this family are available for RagA from Porphyromonas gingivalis, SusC from Bacteroides thetaiotaomicron, and OmpW from Bacteroides caccae. Members form pairs with members of the SusD/RagB family (pfam07980). Transporter complexes including these outer membrane proteins are likely to import large degradation products of proteins (e.g. RagA) or carbohydrates (e.g. SusC) as nutrients, rather than siderophores. [Transport and binding proteins, Unknown substrate]
Pssm-ID: 274948 [Multi-domain] Cd Length: 981 Bit Score: 62.61 E-value: 5.26e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1221423650 36 QPEKSVLAATSVVTREDIDRWQSTTVIDVMR-RLPGVDTAQNGGM-GQLSSLFIRGTNS----SHVLILVDGirlnqagV 109
Cdd:TIGR04056 89 QKKKSLTGAVSTVKAKELKKVPVSNLSNALQgKVAGVIITQSSGEpGGDAEIWIRGISSfggnNSPLYVIDG-------V 161
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|.
gi 1221423650 110 TGSSDLSQFPIALVQRIEYIRGPRS-AVYGSDAIGGVVnIITT-RAKDGTT 158
Cdd:TIGR04056 162 PRDNGLSDLNPEDIESISVLKDASAtAIYGSRGANGVI-LITTkRGKEGKP 211
|
|
| PRK14050 |
PRK14050 |
TonB-dependent siderophore receptor; |
30-194 |
7.65e-10 |
|
TonB-dependent siderophore receptor;
Pssm-ID: 237595 [Multi-domain] Cd Length: 728 Bit Score: 61.74 E-value: 7.65e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1221423650 30 TANRFEQPEKSVLAATSVVTREDIDRWQSTTVID-VMRRLPGVDTAQNGGMGQLSSLFIRGTNSSHVLILVDGIRLNQAG 108
Cdd:PRK14050 68 TGSKTDTPITEIPQSVSVVGRQEMDDRGVTNKVDeALRYTPGVLSQPFGTDGDTDWFYIRGFDATQTGVFLDGLNLFSYG 147
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1221423650 109 VTGSsdlsQFPIALVQRIEYIRGPRSAVYGSDAIGGVVNIITTRAKDGT--TLNAGVGSHGYQNYGGSTQQTLGDST--- 183
Cdd:PRK14050 148 FGGF----QIDPFMLERVEVLKGPASVLYGGSNPGGIVNMVSKRPLDEPlyYTEIGINSYGNAFTGFDVGDKLSDDGtvr 223
|
170
....*....|....
gi 1221423650 184 -RVT--LAGDYTYT 194
Cdd:PRK14050 224 yRVTgkVAGGDNYS 237
|
|
| PRK09840 |
PRK09840 |
catecholate siderophore receptor Fiu; Provisional |
23-209 |
1.16e-09 |
|
catecholate siderophore receptor Fiu; Provisional
Pssm-ID: 182105 [Multi-domain] Cd Length: 761 Bit Score: 61.36 E-value: 1.16e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1221423650 23 SADSlvVTANRFEQPEKSVLAATSVVTREDIDRWQSTTVIDVMRRLPGVDT---AQNGGMGQLSSLFIRGTNSSHVlILV 99
Cdd:PRK09840 55 APDQ--SADPKFSQPLADTTQTITVISEQVIKDQGATNLTEALRNVPGVGTffaGENGNTTTGDAIYMRGFDTSNS-IYV 131
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1221423650 100 DGIRlnqagVTGSSDLSQFPIalvQRIEYIRGPRSAVYGSDAIGGVVNIITTRA--KDGTTLNAGVGSHGYQNYGGSTQQ 177
Cdd:PRK09840 132 DGIR-----DIGSISRDTFNT---EQVEVIKGPSGTDYGRSAPTGSINMISKQPrnDSGIDASASIGSAWFRRGTLDVNQ 203
|
170 180 190
....*....|....*....|....*....|....
gi 1221423650 178 TLGDST--RVTLAGDYTYTKGFDVVADgNNGGLA 209
Cdd:PRK09840 204 VIGDTTavRLNVMGEKTHDAGRDKVKN-ERYGVA 236
|
|
| PRK10044 |
PRK10044 |
ferrichrome outer membrane transporter; Provisional |
2-594 |
1.45e-09 |
|
ferrichrome outer membrane transporter; Provisional
Pssm-ID: 236643 [Multi-domain] Cd Length: 727 Bit Score: 60.93 E-value: 1.45e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1221423650 2 IKKVSLLTALSVTAFSGWAQDSA----DSLVVTANRFEQ-----PEKSVLA---AT---------------SVVTREDID 54
Cdd:PRK10044 13 LRKIAVVVATAVSGMSVYAQAAVepkeETITVTAAPAPQesawgPAATIAAkrsATgtktdtpiektpqsiSVVTAEEMA 92
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1221423650 55 RWQSTTVIDVMRRLPGVDTAQNGGMGQLSSLFIRGTNSSHVL--ILVDGIRLnQAgvTGSSDLSQFPIALvQRIEYIRGP 132
Cdd:PRK10044 93 LHQPKSVKEALSYTPGVSVGTRGASNTYDHLIIRGFAASGQSqnNYLDGLKL-QG--NFYNDAVIDPYML-ERAELMRGP 168
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1221423650 133 RSAVYGSDAIGGVVNIITTRA----------KDGT-TL------------NAGVGSHGYQNYGGST--QQTLGDSTRVTL 187
Cdd:PRK10044 169 VSVLYGKSNPGGLLNMVSKRPtteplkevqfKMGTdNLfqtgfdfsdaldDDGVYSYRLTGLARSAnaQQKGSEEQRYAI 248
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1221423650 188 A----------GDYTYTKGFD---------------VVADGNNGGLAQTD-RDGYMNKTL--------YgALEHTFSEQW 233
Cdd:PRK10044 249 ApsftwrpddkTNFTFLSYFQnepetgyygwlpkegTVEPLPNGKRLPTDfNEGAKNNTYsrnekmvgY-SFDHEFNDTF 327
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1221423650 234 SgfVR-GYGYS-NRTAYDGYY-SAFTPD--------VLVDTRQLYSQTWDAGLRFN---EDIFHSQLLS-SYSHSK-DFN 297
Cdd:PRK10044 328 T--VRqNLRYAeNKTSQRSVYgYGVCSDkghylnrgYVVDDEKLQNFSVDTQLQSKfatGDVDHTLLTGvDFMRMRnDIN 405
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1221423650 298 YDphlgrYDSTATLDEIKQYNVQWTNSVDVGHGNIGAGVDWQKQS-------TEPNTNYVTNG--YDLRNTGVY--LTGl 366
Cdd:PRK10044 406 AW-----FGYADSVPLLNLYGPVNTDFDFNANSGPYQILNKQKQTglyvqdqAEWDKWLVTLGgrYDWADQSSLnrVNG- 479
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1221423650 367 qklgdftleGAARSDDNsQFgrhgTWQSSAAWEFIEGYRFIASYGTAYKaPNLGQlyGYYGNDhLDPEESKQWEgafegl 446
Cdd:PRK10044 480 ---------TTDKRDDK-QF----TWRGGVNYLFDNGITPYFSYSESFE-PSSGT--GKDGNI-FAPSKGKQYE------ 535
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1221423650 447 tAGVSW---------RVSAYRNDVDN--LIDFNNNLqeyYNV--GKARIKGV--EATASFdTGPVMHTVGYDYVDARNAT 511
Cdd:PRK10044 536 -AGVKYvpkdrpivvTGAVYQLTKTNnlTADPENSF---FSVqgGEIRARGVelEAKAAL-SANVNVTGSYTYTDAEYTT 610
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1221423650 512 TNELLDRRAKQQVKYQL---------DTQIYDLDWSLTYHYLGTRYDTnfgtyPYQKVKMGGVSLWDAAVSYPVT----- 577
Cdd:PRK10044 611 DTTYKGNTPAQVPKHMAslwadytffDGPLSGLTLGTGGRYTGSSYGD-----PANSFKVGSYTVVDALVKYDLArfgma 685
|
730
....*....|....*...
gi 1221423650 578 -SHLTVrgKIANLFDKDY 594
Cdd:PRK10044 686 gSSVAL--NVNNLFDREY 701
|
|
| TonB-Xanth-Caul |
TIGR01782 |
TonB-dependent receptor; This model represents a family of TonB-dependent outer-membrane ... |
25-164 |
2.00e-09 |
|
TonB-dependent receptor; This model represents a family of TonB-dependent outer-membrane receptors which are found mainly in Xanthomonas and Caulobacter. These appear to represent the expansion of a paralogous family in that the 22 X. axonopodis (21 in X. campestris) and 18 C. crescentus sequences are more closely related to each other than any of the many TonB-dependent receptors found in other species. In fact, the Crescentus and Xanthomonas sequences are inseparable on a phylogenetic tree using a PAM-weighted neighbor-joining method, indicating that one of the two genuses may have acquired this set of receptors from the other. The mechanism by which this family is shared between Xanthomonas, a gamma proteobacterial plant pathogen and Caulobacter, an alpha proteobacterial aquatic organism is unclear. [Transport and binding proteins, Porins]
Pssm-ID: 273804 [Multi-domain] Cd Length: 845 Bit Score: 60.81 E-value: 2.00e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1221423650 25 DSLVVTANRfEQPEKSVLA------ATSVVTREDIDRWQSTTVIDVMRRLPGVDTAQNGGMGQLSSlfIRGTNSSHVLIL 98
Cdd:TIGR01782 2 DAVQVTGQR-ASLEKAIDAkrdadsVVDVISAEDIGKLPDVNVAEALQRVPGVSIERDQGEGRYVS--VRGLGPSYNRTT 78
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1221423650 99 VDGIRLNQAGVTG-SSDLSQFPIALVQRIEYIRGPrSAVYGSDAIGGVVNIITTRAKD--GTTLNAGVG 164
Cdd:TIGR01782 79 LNGRTIASTDSGGrAFSLDLLPSELVSGVEVYKTP-TADMDEGGIGGTVDLRTRSPFDydGRTLSGSAQ 146
|
|
| PRK14049 |
PRK14049 |
ferrioxamine B receptor precursor protein; Provisional |
6-155 |
8.99e-05 |
|
ferrioxamine B receptor precursor protein; Provisional
Pssm-ID: 172541 [Multi-domain] Cd Length: 726 Bit Score: 45.66 E-value: 8.99e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1221423650 6 SLLTALSVTAFSGWAQDsADSLVVTANR----FEQPEKSVLAATSVVTREDIDRWQSTTVIDVMRRLPGVDTAQNGGMGQ 81
Cdd:PRK14049 41 TALETLVVNGGSGGVIT-ADGYVATSSAtgakVDTPFLETPQSISSVTEQQLKDRNPQTLLETLAYTPGARVGAFGFDPR 119
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1221423650 82 LSSLFIRGTNSSHVLILVDGIRlnQAGVTgSSDLSQFPIALvQRIEYIRGPRSAVYGSDAIGGVVNIITTRAKD 155
Cdd:PRK14049 120 FDAFFVRGFDVTYTGVFRDNLR--QPGAS-SSIFKTEPYGL-EGVSILRGPSSALYGASGAGGLFNLITKRPTE 189
|
|
| PRK10003 |
PRK10003 |
ferric-rhodotorulic acid outer membrane transporter; Provisional |
553-615 |
1.87e-03 |
|
ferric-rhodotorulic acid outer membrane transporter; Provisional
Pssm-ID: 236640 [Multi-domain] Cd Length: 729 Bit Score: 41.39 E-value: 1.87e-03
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1221423650 553 GTYPYQKVKMGGVSLWDAAVSYPVTSHLTVRGKIANLFDKDYET------VYGyqtAGREYTLSGSYTF 615
Cdd:PRK10003 664 TPYGTFRAEQGSYALVDLFTRYQVTKNFSVQGNVNNLFDKTYDTnvegsiVYG---APRNFSITATYQF 729
|
|
|