|
Name |
Accession |
Description |
Interval |
E-value |
| CirA |
COG1629 |
Outer membrane receptor protein, Fe transport [Inorganic ion transport and metabolism]; |
26-671 |
5.33e-94 |
|
Outer membrane receptor protein, Fe transport [Inorganic ion transport and metabolism];
Pssm-ID: 441236 [Multi-domain] Cd Length: 644 Bit Score: 304.44 E-value: 5.33e-94
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1248244047 26 IETITTTASRTEALATPYPLTISTLSEAQLNSIAPTHVEESLQRIAGANVQRGNGQEYLPALRspvlsG-AAACGGILTL 104
Cdd:COG1629 1 LEEVVVTATRTDESLQDVPGSVSVISREQLEDQPATDLGDLLRRVPGVSVTSAGGGAGQISIR-----GfGGGGNRVLVL 75
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1248244047 105 EDGIPLRAAGFCNINeLFEAHSEMAQRIEVLKGPGSALYGSNAVHGVINVITPDTTQG-GGLVGLDYGSYGYARYKLRAG 183
Cdd:COG1629 76 VDGVPLNDPSGGDGG-LSYIDPEDIERVEVLRGPSSALYGSGALGGVINIVTKKPKDGkGGEVSASYGSYGTYRASLSLS 154
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1248244047 184 QDYGNSGIGINASVTDDTGYRDDESVKQQKINIRHRFE-HSNLLLTSGLTYTNLDQHTAGFITGFESYKNEDIAQ-QNFD 261
Cdd:COG1629 155 GGNGKLAYRLSASYRDSDGYRDNSDSDRYNLRAKLGYQlGDDTRLTLSASYSDSDQDSPGYLTLAALRPRGAMDDgTNPY 234
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1248244047 262 PDAFRKARSFRAWSNAQWQ-LKNGNVLSITPYVRDQSMDFFKHFLPGTPL--------ETNSQTGIGVQSLYQHNLQSNV 332
Cdd:COG1629 235 SNDTDDNTRDRYSLSLEYEhLGDGLKLSASAYYRYDDTDLDSDFTPTPADggtleqtdFDNRTYGLELRLTYDLGFGGKH 314
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1248244047 333 KVNLGLDGEYTRSDFTQSQNEPTQGSAFLVATVpqgkhYDYDVNATLYAPFASVEWQLN-KWFISAGLRYEHMQYDYTNN 411
Cdd:COG1629 315 TLLVGLDYQRQDLDGSGYPLDLGSGSLPTLTSG-----ADDDGTTTSLALYAQDTYKLTdKLTLTAGLRYDYVSYDVDDT 389
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1248244047 412 MltgrttedgtecgfggcRYSRPASGKNSFSNTSPKFGVSYKANKNNTLYANFSRGYRAPQAAELYQLQREQTT---ADL 488
Cdd:COG1629 390 V-----------------TGTDSASGSRSYSAFSPSLGLTYQLSPNLSLYASYSRGFRAPTFGELYANGTDPYSvgnPDL 452
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1248244047 489 NPEIANNAELGLKGYY--SNVSYALAVYAMSKHNTIYRDSD-------FFNVNDGSSRHRGIELEVDYALSKTLNLQFAG 559
Cdd:COG1629 453 KPETSTNYELGLRYRLldGRLSLSLALFYSDVDNEILSVPLpndsgfsTYYTNAGKARSYGVELELSYQLTPGLSLNASY 532
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1248244047 560 THAKHTYTNNqLINGLNINGNNVDTAPRNVANLDLTWQAFNNLALALQWHSVSSYYTDPEN-LHSYEGHDILSLRAKWQV 638
Cdd:COG1629 533 SYTDAKFDDD-TDGSADLDGNRLPGVPPLTANLGLTYEFPGGWSLGLGVRYVGDRYLDDANtQGAPGGYTLVDLGAGYRF 611
|
650 660 670
....*....|....*....|....*....|...
gi 1248244047 639 TNNLEVLARIINLTDEAYAERADYTSFTGDRYF 671
Cdd:COG1629 612 GDNLTLSLGVDNLFDKKYATSLSVRASNVRGFL 644
|
|
| ligand_gated_channel |
cd01347 |
TonB dependent/Ligand-Gated channels are created by a monomeric 22 strand (22,24) ... |
46-686 |
2.71e-60 |
|
TonB dependent/Ligand-Gated channels are created by a monomeric 22 strand (22,24) anti-parallel beta-barrel. Ligands apparently bind to the large extracellular loops. The N-terminal 150-200 residues form a plug from the periplasmic end of barrel. Energy (proton-motive force) and TonB-dependent conformational alteration of channel (parts of plug, and loops 7 and 8) allow passage of ligand. FepA residues 12-18 form the TonB box, which mediates the interaction with the TonB-containing inner membrane complex. TonB preferentially interacts with ligand-bound receptors. Transport thru the channel may resemble passage thru an air lock. In this model, ligand binding leads to closure of the extracellular end of pore, then a TonB-mediated signal facillitates opening of the interior side of pore, deforming the N-terminal plug and allowing passage of the ligand to the periplasm. Such a mechanism would prevent the free diffusion of small molecules thru the pore.
Pssm-ID: 238657 [Multi-domain] Cd Length: 635 Bit Score: 213.47 E-value: 2.71e-60
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1248244047 46 TISTLSEAQLNSIAPTHVEESLQRIAGANVQRGNGQEYlpalRSPVLSGAAAcGGILTLEDGIPLRAAGFCNINELFEAH 125
Cdd:cd01347 1 SVSVITAEDIEKQPATSLADLLRRIPGVSVTRGGGGGG----STISIRGFGP-DRTLVLVDGLPLASSNYGRGVDLNTIP 75
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1248244047 126 SEMAQRIEVLKGPGSALYGSNAVHGVINVITPD-TTQGGGLVGLDYGSYGYAryklragqDYGNSGIGINASVTDDTG-- 202
Cdd:cd01347 76 PELIERVEVLKGPSSALYGSGAIGGVVNIITKRpTDEFGGSVTAGYGSDNSG--------SSGGGGFDVSGALADDGAfg 147
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1248244047 203 ------YRDDESVKQQKINIRHRFeHSNLLLTSGLTYTNLDQHTAGFITGFESYKN-EDIAQQNFDPDAFRKARSFRAWS 275
Cdd:cd01347 148 arlygaYRDGDGTIDGDGQADDSD-EERYNVAGKLDWRPDDDTRLTLDAGYQDQDAdGPGGTLPANGTGSSLGGGPSSNT 226
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1248244047 276 NAqWQLKNGNVLSITPYVRDQSMDFFKHFLPGTPLETNSQTGIGVQSLYQHNLQSNVKVNLGLDGEYTRSDFTQSQNEPT 355
Cdd:cd01347 227 NG-DRDWDYRDRYRKRASLGLEHDLNDTGWTLRANLSYSYTDNDGDPLILNGGNNAAGGDLGRSGYSSERDTTQLGFDAG 305
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1248244047 356 QGSAFLVATVPQ-----GKHYDYDVNATLYAPFASVEWQLN-KWFISAGLRYEHMQYDYTNNMLTGRTTedgtecgfggc 429
Cdd:cd01347 306 LNAPFGTGPVAHtltlgVEYRREELDEKQTALYAQDTIELTdDLTLTLGLRYDHYDQDSKDTIAGGTTA----------- 374
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1248244047 430 rysrpasgKNSFSNTSPKFGVSYKANKNNTLYANFSRGYRAPQAAELYQLQREQTTA-----DLNPEIANNAELGLKGYY 504
Cdd:cd01347 375 --------KKSYSHWSPSLGLVYKLTDGLSLYASYSQGFRAPSLGELYGGGSHGGTAavgnpNLKPEKSKQYELGLKYDP 446
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1248244047 505 SNVSYA-LAVYAMSKHNTIYRDSD-------FFNVNDGSSRHRGIELEVDYALSKTLNLQFAGTHAKhtytNNQLINGLN 576
Cdd:cd01347 447 GDGLTLsAALFRIDIKNEIVSTPTntglglvTVYVNGGKARIRGVELEASYDLTDGLGLTGSYTYTD----TEVKRTDGA 522
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1248244047 577 INGNNVDTAPRNVANLDLTWQA-FNNLALALQWHSVSSYYTDPENL---HSYEGHDILSLRAKWQVTNNLEVLARIINLT 652
Cdd:cd01347 523 TTGNRLPGIPKHTANLGLDYELpDEGLTAGGGVRYRGKQYADTANGnntVKVPGYTLVDLSASYQFTKNLTLRLGVNNLF 602
|
650 660 670
....*....|....*....|....*....|....
gi 1248244047 653 DEAYaERADYTSFTGDRYFPGKPRNAMLSATYTW 686
Cdd:cd01347 603 DKDY-YTSLSVRGSGLYGYYGPGRTYYLSVSYKF 635
|
|
| TonB_dep_Rec |
pfam00593 |
TonB dependent receptor; This model now only covers the conserved part of the barrel structure. |
202-685 |
2.49e-41 |
|
TonB dependent receptor; This model now only covers the conserved part of the barrel structure.
Pssm-ID: 395474 [Multi-domain] Cd Length: 475 Bit Score: 157.24 E-value: 2.49e-41
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1248244047 202 GYRDDESVKQQKINIRHRFEHSNLLLTSGLTYTNLDQHTAGFITGFESYKNEDiAQQNFDPDAFRKARSFRAWSNAQWQL 281
Cdd:pfam00593 1 GWQLSLDLLGDDTLLTLGYDYSRYTDGLDLGLTLDGYGNDGGYLGDRPLYYGR-DYSDTDRKRLSLGYDYDLGDGLSWLS 79
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1248244047 282 KNGNVLSITPYVRDQSMDFFKHFLPGTPLETNSQ-TGIGVQSLYQHNLQSNVKVNLGLDGEYTRSDFTQSQNEPTQGSAF 360
Cdd:pfam00593 80 TLRLGLRYSSLDGDYTSNSSGLSGAGDYLSDDRLyGLYGLDGDLELSLDLSHDLLLGVELRTAGLDYRRLDDDAYDPYDP 159
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1248244047 361 LVATVPQGKHYDYDVnatlYAPFASVEWQL-NKWFISAGLRYEHMQYDYTNNMLTGRTTedgtecgfggcrysrpasgKN 439
Cdd:pfam00593 160 ANPSSSSYSDTTTDS----YGLYLQDNIKLtDRLTLTLGLRYDHYSTDGDDGNGGGDNF-------------------SR 216
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1248244047 440 SFSNTSPKFGVSYKANKNNTLYANFSRGYRAPQAAELYQLQREQTTA-------DLNPEIANNAELGLKGYYSNVSYALA 512
Cdd:pfam00593 217 SYSAFSPRLGLVYKPTDNLSLYASYSRGFRAPSLGELYGSGSGGGGGavaggnpDLKPETSDNYELGLKYDDGRLSLSLA 296
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1248244047 513 VYAMSKHNTIYRDSD--------FFNVNDGSSRHRGIELEVDYALsktlnLQFAGTHAKHTYTNNQLINGLNINGNNVDT 584
Cdd:pfam00593 297 LFYIDIKNLITSDPDgpglggtvYTYTNVGKARIRGVELELSGRL-----WGLGLSGGGYTYTDADDDADADDTGNPLPN 371
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1248244047 585 APRNVANLDLTWQAFN---NLALALQWHSVSS-YYTDPENLHSYEGHDILSLRAKWQVTNNLEVLARIINLTDEAYAERA 660
Cdd:pfam00593 372 VPRHTANLGLTYDFPLggwGARLGARYVGSGErRYGDAANTFKTPGYTLVDLSAGYRLNKNLTLRLGVNNLFDKYYKRYY 451
|
490 500
....*....|....*....|....*
gi 1248244047 661 DYTSFTGDRYfPGKPRNAMLSATYT 685
Cdd:pfam00593 452 SSGGGNLGGY-PGPGRTFYLGLSYK 475
|
|
| TonB-siderophor |
TIGR01783 |
TonB-dependent siderophore receptor; This subfamily model encompasses a wide variety of ... |
43-684 |
2.38e-36 |
|
TonB-dependent siderophore receptor; This subfamily model encompasses a wide variety of TonB-dependent outer membrane siderophore receptors. It has no overlap with TonB receptors known to transport other substances, but is likely incomplete due to lack of characterizations. It is likely that genuine siderophore receptors will be identified which score below the noise cutoff to this model at which point the model should be updated. [Transport and binding proteins, Cations and iron carrying compounds, Transport and binding proteins, Porins]
Pssm-ID: 273805 [Multi-domain] Cd Length: 651 Bit Score: 145.25 E-value: 2.38e-36
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1248244047 43 YPLTISTLSEAQLNSIAPTHVEESLQRIAGANVQRGNGQEYLPALRSPVLSGAAACGGILTleDGIPLRAAGfcninELF 122
Cdd:TIGR01783 2 IPQSVSVITRQELEDQQAGSLSEALQRVPGVVVGGSGGTTQFGNITIRGFGLEVDIDNVYL--DGVPLLSRG-----NLA 74
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1248244047 123 EAHSEMAQRIEVLKGPGSALYGSNAVHGVINVIT--PDTTQGGGlVGLDYGSYGYARYKLRAGQDYGNSG-IG--INASV 197
Cdd:TIGR01783 75 IVDPAMVERVEVLRGPASLLYGGSAPGGVINIVTkrPQDEPKGS-VTFGAGTRSGYRTAFDLGGPLGADGtFRgrLNGAR 153
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1248244047 198 TDDTGYRDDESVKQQKINIRHRFEHS-NLLLTSGLTYTNLDQHTAGFITGFESYKNEDIAQQNFDPDAFRKARSFRAWSN 276
Cdd:TIGR01783 154 QDGDSFYDGAGEETRLGATATDWQLDdRTLLRLGAYYQKERDRGGYGGLPASGGTSGRDLSSDRYLGTSSNRNYDDREYL 233
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1248244047 277 A-----QWQLKNG----NVLSITPYVRDQSMDFFKHFlpgtpleTNSQTGIGVQSLYQHNLQSNVKVNLGLDGEYTRSDF 347
Cdd:TIGR01783 234 SyglslEYQFNDVwtgkQNLRYSYFDTDSNQVQASGY-------SSDGGLFGRSLTVVNVKQDRVQIDAGLDGEFETGPI 306
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1248244047 348 TQ-----------------SQNEPTQGSAFLVATVPQGkhYDYDVNATLYAP----FASVEWQLN------KWFISAGLR 400
Cdd:TIGR01783 307 EHdlllgvsygqrttnrfnNTGYPSDNIYSLTATSSAR--TDIGDSPKDRALssttKALNGVALQrilladKWTLTLGGR 384
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1248244047 401 YEHMQYDyTNNMLTGRTTEDgtecgfggcrysrpasgknSFSNTSPKFGVSYKANKNNTLYANFSRGYRAPQAAELYQLQ 480
Cdd:TIGR01783 385 YDSVDVK-SNNGVAGSTGKR-------------------DDSQFTPSLGVAYKPTDDWSLYASYAESFKPGGYYPKGAGN 444
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1248244047 481 REQttaDLNPEIANNAELGLKGYYSNV-SYALAVYAMSKHNTIYRDS--DFFNVNDGSSRHRGIELEVDYALSKTLNLQF 557
Cdd:TIGR01783 445 SGD---ILEPEKGKNYELGVRYDLGDSlLATAALFRITKDNQLVQDPvnGTFSVNAGKTRNRGVELEARGYLTPGLSLSA 521
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1248244047 558 AGTHAKHTYTNnqlINGLNINGNNVDTAPRNVANLDLTWQAF---NNLALALQWHSVSSYYTDPENLHSYEGHDILSLRA 634
Cdd:TIGR01783 522 GYTYTDAEFTE---DTNGDTQGNTVPFVPKHTASLWASYAPPvgdNGLTLGGGVQYTGKAYVDGGNTGKVPSYTVVDLSV 598
|
650 660 670 680 690
....*....|....*....|....*....|....*....|....*....|...
gi 1248244047 635 KWQVTNNLEVLAR--IINLTDEAYAERA-DYTSFTGDryFPGKPRNAMLSATY 684
Cdd:TIGR01783 599 RYDLTKKKNLTLAlnVNNLFDRDYYTSGyRWGPSAYI--YPGAPRTVGLSVSY 649
|
|
| PRK13483 |
PRK13483 |
ligand-gated channel protein; |
16-654 |
2.17e-15 |
|
ligand-gated channel protein;
Pssm-ID: 184080 [Multi-domain] Cd Length: 660 Bit Score: 79.82 E-value: 2.17e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1248244047 16 AIADNKNDDAIETITTTASRTEALATPYPLTISTLSEAQLNSIAPTHVEESLQRIAGANVQ----------RGNGQEYLP 85
Cdd:PRK13483 23 ALAQAAPDKTMETVVVTASGYEQQIRDAPASISVITREDLENRFYRDLTDALLDVPGVVVTgggdrtdislRGMGSQYTL 102
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1248244047 86 AL----------RSPVLSGAAACGGILTledgiPLRAAgfcninelfeahsemaQRIEVLKGPGSALYGSNAVHGVINVI 155
Cdd:PRK13483 103 ILvdgkrqssreTRPNSDGPGVEQAWTP-----PLAAI----------------ERIEVIRGPMSSLYGSDAIGGVINII 161
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1248244047 156 T---PDTTQGGglVGLDygsygyarYKLRAGQDYGNSGIG---INASVTDDT------GyrddESVKQQKINIRHRFE-H 222
Cdd:PRK13483 162 TrkvPNEWQGE--VRLD--------TTLQENSDSGNVYQAnffVNGPLIKDLlglqlyG----QYTQREEDDIEGGYRdK 227
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1248244047 223 SNLLLTSGLTYTNLDQHTAGFITGFESYKNEDIAQQNFDPDAFRKARSFRAwsnaqwqlknGNVLSITPYVRDqsmdffk 302
Cdd:PRK13483 228 DARSLTAKLALTPNEDHDIMLEVGTSNQERDSTVGKTVAPLAPGESCGRRG----------CPESSTTEYERS------- 290
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1248244047 303 HFlpgtPLETNSQTGIGVQSLYqhnLQSNVKVNLGLDGEYTRSDFTQSQNEPTqGSAFLVATVPQGKHYDY--------- 373
Cdd:PRK13483 291 TV----SLSHTGRWDFGTSDTY---IQHEEFDNKSREMKIKNTDFQSSLVAPL-GQEHTLTFGAAYNHQDLtdetsnqis 362
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1248244047 374 ---DVNATLYAPFASVEWQLNKWF-ISAGLRYEHMQydytnnmltgrttedgtecGFGGcrysrpasgknsfsNTSPK-F 448
Cdd:PRK13483 363 dltDISRTQWAVFSEDEWRIADDFaLTGGLRLDHDE-------------------NFGG--------------HVSPRvY 409
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1248244047 449 GVsYKANKNNTLYANFSRGYRAPQ----AAELYQLQREQT---TADLNPEIANNAELGLkgYYSNVSyALAVYAMSKHN- 520
Cdd:PRK13483 410 GV-WNLAPSWTVKGGVSTGFRAPSlrqtTPDWGQVSRGGNiygNPDLKPETSLNKELGL--YYDLGS-GLTASLTVFYNe 485
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1248244047 521 ------------TIYRD------SD---FFNVNDGSSrhRGIELEVDYALSKTLNLQfagthAKHTYTNNQlINGLNING 579
Cdd:PRK13483 486 fkdkitrvacpaTQCTDgpnqfgADpttYVNIDEAVT--QGVEASLSYPITSTLSLS-----GNYTYTDSE-QKSGAYKG 557
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1248244047 580 NNVDTAPRNVANLDLTWQAFNNLALALQWH-----------SVSSYYTDPenlhSYEghdILSLRAKWQVTNNLEVLARI 648
Cdd:PRK13483 558 SPLNQLPKHLFQASLNWEPTDRLNSWARVNyrgeesqpttgPSSSSFIAP----SYT---FLDLGANYQLTDNLKLSAGI 630
|
....*.
gi 1248244047 649 INLTDE 654
Cdd:PRK13483 631 YNLFDK 636
|
|
| |
|
Name |
Accession |
Description |
Interval |
E-value |
| CirA |
COG1629 |
Outer membrane receptor protein, Fe transport [Inorganic ion transport and metabolism]; |
26-671 |
5.33e-94 |
|
Outer membrane receptor protein, Fe transport [Inorganic ion transport and metabolism];
Pssm-ID: 441236 [Multi-domain] Cd Length: 644 Bit Score: 304.44 E-value: 5.33e-94
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1248244047 26 IETITTTASRTEALATPYPLTISTLSEAQLNSIAPTHVEESLQRIAGANVQRGNGQEYLPALRspvlsG-AAACGGILTL 104
Cdd:COG1629 1 LEEVVVTATRTDESLQDVPGSVSVISREQLEDQPATDLGDLLRRVPGVSVTSAGGGAGQISIR-----GfGGGGNRVLVL 75
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1248244047 105 EDGIPLRAAGFCNINeLFEAHSEMAQRIEVLKGPGSALYGSNAVHGVINVITPDTTQG-GGLVGLDYGSYGYARYKLRAG 183
Cdd:COG1629 76 VDGVPLNDPSGGDGG-LSYIDPEDIERVEVLRGPSSALYGSGALGGVINIVTKKPKDGkGGEVSASYGSYGTYRASLSLS 154
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1248244047 184 QDYGNSGIGINASVTDDTGYRDDESVKQQKINIRHRFE-HSNLLLTSGLTYTNLDQHTAGFITGFESYKNEDIAQ-QNFD 261
Cdd:COG1629 155 GGNGKLAYRLSASYRDSDGYRDNSDSDRYNLRAKLGYQlGDDTRLTLSASYSDSDQDSPGYLTLAALRPRGAMDDgTNPY 234
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1248244047 262 PDAFRKARSFRAWSNAQWQ-LKNGNVLSITPYVRDQSMDFFKHFLPGTPL--------ETNSQTGIGVQSLYQHNLQSNV 332
Cdd:COG1629 235 SNDTDDNTRDRYSLSLEYEhLGDGLKLSASAYYRYDDTDLDSDFTPTPADggtleqtdFDNRTYGLELRLTYDLGFGGKH 314
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1248244047 333 KVNLGLDGEYTRSDFTQSQNEPTQGSAFLVATVpqgkhYDYDVNATLYAPFASVEWQLN-KWFISAGLRYEHMQYDYTNN 411
Cdd:COG1629 315 TLLVGLDYQRQDLDGSGYPLDLGSGSLPTLTSG-----ADDDGTTTSLALYAQDTYKLTdKLTLTAGLRYDYVSYDVDDT 389
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1248244047 412 MltgrttedgtecgfggcRYSRPASGKNSFSNTSPKFGVSYKANKNNTLYANFSRGYRAPQAAELYQLQREQTT---ADL 488
Cdd:COG1629 390 V-----------------TGTDSASGSRSYSAFSPSLGLTYQLSPNLSLYASYSRGFRAPTFGELYANGTDPYSvgnPDL 452
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1248244047 489 NPEIANNAELGLKGYY--SNVSYALAVYAMSKHNTIYRDSD-------FFNVNDGSSRHRGIELEVDYALSKTLNLQFAG 559
Cdd:COG1629 453 KPETSTNYELGLRYRLldGRLSLSLALFYSDVDNEILSVPLpndsgfsTYYTNAGKARSYGVELELSYQLTPGLSLNASY 532
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1248244047 560 THAKHTYTNNqLINGLNINGNNVDTAPRNVANLDLTWQAFNNLALALQWHSVSSYYTDPEN-LHSYEGHDILSLRAKWQV 638
Cdd:COG1629 533 SYTDAKFDDD-TDGSADLDGNRLPGVPPLTANLGLTYEFPGGWSLGLGVRYVGDRYLDDANtQGAPGGYTLVDLGAGYRF 611
|
650 660 670
....*....|....*....|....*....|...
gi 1248244047 639 TNNLEVLARIINLTDEAYAERADYTSFTGDRYF 671
Cdd:COG1629 612 GDNLTLSLGVDNLFDKKYATSLSVRASNVRGFL 644
|
|
| FecA |
COG4772 |
Outer membrane receptor for Fe3+-dicitrate [Inorganic ion transport and metabolism]; |
1-686 |
1.25e-88 |
|
Outer membrane receptor for Fe3+-dicitrate [Inorganic ion transport and metabolism];
Pssm-ID: 443804 [Multi-domain] Cd Length: 681 Bit Score: 291.06 E-value: 1.25e-88
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1248244047 1 MKPYILPLLLPLSHVAIADNKNDDAIETITTTASRTEALATPYplTISTLSEAQLNSIAPTHVEESLQRIAGANVQRGNG 80
Cdd:COG4772 1 MRRALAAALLLAAAAAAEAATTLETVVVTGSRAAEARLKDVPG--SVSVVDREELENQAATSLREVLRRVPGVNVQEEDG 78
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1248244047 81 qeylPALRsPVLS----GAAACGGILTLEDGIPLRAAGFCNINELFEAHSEMAQRIEVLKGPGSALYGSNAVHGVINVIT 156
Cdd:COG4772 79 ----FGLR-PNIGirglGPRRSRGITLLEDGIPIAPAPYGDPAAYYFPDLERMERIEVLRGAAALRYGPQTVGGAINFVT 153
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1248244047 157 PD-TTQGGGLVGLDYGSYGYARYKLRAGQDYGNSGIGINASVTDDTGYRDDESVKQQKINIRHRFEHS-NLLLTSGLTYT 234
Cdd:COG4772 154 RTiPTAFGGELRVTGGSFGYRRTHASVGGTVGNFGYLVEYSRKRGDGFRDNSGFDINDFNAKLGYRLSdRQELTLKFQYY 233
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1248244047 235 NLDQHTAGFITGFESYKNediAQQNFDPDAFRKARSFRAWSNAQWQLKNGNVLSITPYVRDQSMDFFKHFLPGTPLETNS 314
Cdd:COG4772 234 DEDANTPGGLTDAQFDAD---PRQSYRPADQFDTRRTQLSLRYEHQLSDNTTLTTTAYYNDFSRNWYIRQNTADPNTPGL 310
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1248244047 315 QTG--------IGVQSLYQHNLQ---SNVKVNLGLDGEYTRSDFTQSQNEPTQGSAFLvatvPQGKHYDYDVNAtlYAPF 383
Cdd:COG4772 311 GLRgnprgyrsYGIEPRLTHRFElggVPHTLEVGLRYHREEEDRKQYVNTYGQGRSGA----GLRRDRRFSADA--LAAY 384
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1248244047 384 ASVEWQL-NKWFISAGLRYEHMQYDYTNNMLTGRTTEDgtecgfggcrysrpaSGKNSFSNTSPKFGVSYKANKNNTLYA 462
Cdd:COG4772 385 AQNRFELtGRLTLTPGLRYEHIRRDRTDRYSTRTGGDD---------------SGSNSYSEFLPGLGLLYQLTDNLQLYA 449
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1248244047 463 NFSRGYRAPQAAELyqLQREQTTADLNPEIANNAELGLKG-YYSNVSYALAVYAMSKHNTIYRDS-------DFFNVndG 534
Cdd:COG4772 450 NVSRGFEPPTFGDL--AYGNGGNPDLKPEKSWNYELGTRGrIGNGLSAEVALFYIDYDNELGSCSaaggdrsTFTNA--G 525
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1248244047 535 SSRHRGIELEVDYALSKT----LNLQFAGTHAKHTYTNNqliNGLNINGNNVDTAPRNVANLDLTWQaFNNLALALQWHS 610
Cdd:COG4772 526 ETRHQGLELALDYDLLKGgglgLPLFAAYTYTDAEFTSD---FGPVFAGNRLPYVPRHQLTAGLGYE-HGGWTANLNGRY 601
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1248244047 611 VSSYYTDPENLHSY------EGHDILSLRAKWQVTNNLEVLARIINLTDEAYAerADYTSFTGDRYFPGKPRNAMLSATY 684
Cdd:COG4772 602 VSEQFTDAANTVADgsfgkiPSYTVLDLSASYDFGKNLSLFAGVNNLFDKRYI--ASRAPNYAAGIRPGPPRTVYAGLRL 679
|
..
gi 1248244047 685 TW 686
Cdd:COG4772 680 KF 681
|
|
| FepA |
COG4771 |
Outer membrane receptor for ferrienterochelin and colicins [Inorganic ion transport and ... |
25-644 |
1.48e-68 |
|
Outer membrane receptor for ferrienterochelin and colicins [Inorganic ion transport and metabolism];
Pssm-ID: 443803 [Multi-domain] Cd Length: 612 Bit Score: 235.52 E-value: 1.48e-68
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1248244047 25 AIETITTTASRTEALATPYPLTISTLSEAQLNSIAPTHVEESLQRIAGANVQRGNGQeylPALRSPVLSGAAAcGGILTL 104
Cdd:COG4771 26 ELEEVVVTATRTEQSLSDAPASVSVITAEEIEKLGATDLADALRLLPGVSVTRSGGR---GGSSGISIRGLGG-DRVLVL 101
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1248244047 105 EDGIPLRAAGFCNINELFEAHSEMAQRIEVLKGPGSALYGSNAVHGVINVITPD-TTQGGGLVGLDYGSYGYARYKLRA- 182
Cdd:COG4771 102 IDGVPVNNPALGGGGDLSYIPPDDIERIEVIRGPASALYGSDAIGGVINIITKKpTDELEGSVSLGYGSNGNGTYSGSLs 181
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1248244047 183 -GQDYGNSGIGINASVTDDTGYRDDESVKQQKINirhRFEHSNLLLTSGLTYTNLDQHTAGFITGFESYKNEDIA----Q 257
Cdd:COG4771 182 lGGPGDKLSFLLSGSYRDRDGYLDYRNGGFVGNS---GYERYNLNAKLGYRLSDNHRLSLSGGYSRQDRDGGPPTlgdtE 258
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1248244047 258 QNFDPDAFRKARSFRAWSNAQWQLKNGNVLSITPYVRDQSMD--FFKHFLPGTPLETNSQTGIGVQSLYQHNLQSNVKVN 335
Cdd:COG4771 259 ISSDNAGDRDTTTDRGNYSLRYNGDLGDNLDLSLYYSRTDRDstNGSLGGSTGSFSDSDDTTYGLELDLTYPLGGNHTLT 338
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1248244047 336 LGLDGEYTRSDFTQSQNeptqgsaflvatvpqgkhyDYDVNATLYAPFASVEWQLN-KWFISAGLRYEHMQYdytnnmlt 414
Cdd:COG4771 339 LGAEYRYDDLDSSSFLG-------------------GADASRDTYGLFAQDEWKLTdKLTLTAGLRYDYYST-------- 391
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1248244047 415 grttedgtecgfggcrysrpaSGKNSFSNTSPKFGVSYKANKNNTLYANFSRGYRAPQAAELYQLQREQTTA------DL 488
Cdd:COG4771 392 ---------------------FGASNYTAFSPRLGLRYDLSDNLTLRASYGRGFRAPSLAELYGSGTGTPGRyvlgnpDL 450
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1248244047 489 NPEIANNAELGLKGYYSN--VSYALAVYAMSKHNTIYRDSD-------FFNVNDGSSRHRGIELEVDYALSKTLNLQFAG 559
Cdd:COG4771 451 KPETSDNYELGLEYRLGNggLSLSLTGFYTDIKDLIVLVPVgpgpgdvLQYENVGKARTYGLELELKYRLGKGLTLTASY 530
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1248244047 560 THAKHTYTNNQlinglniNGNNVDTAPRNVANLDLTWQAFNNLALALQWHSVSSYYTDPENLHSYEGHD---ILSLRAKW 636
Cdd:COG4771 531 TYLDSKIDDGD-------TGEPLPNVPPHKANLGLDYRLPKWWLLLLLTRYYGGRYVTPPSGRLEGYTPgytLLDLRASY 603
|
....*...
gi 1248244047 637 QVTNNLEV 644
Cdd:COG4771 604 KLTKNLTL 611
|
|
| Fiu |
COG4774 |
Outer membrane receptor for monomeric catechols [Inorganic ion transport and metabolism]; |
44-686 |
1.90e-62 |
|
Outer membrane receptor for monomeric catechols [Inorganic ion transport and metabolism];
Pssm-ID: 443806 [Multi-domain] Cd Length: 639 Bit Score: 219.75 E-value: 1.90e-62
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1248244047 44 PLTISTLSEAQLNSIAPTHVEESLQRIAGANVQRGNGQEYLpalrSPVLSGAAACGGILtlEDGIPLRAAGFcniNELFe 123
Cdd:COG4774 10 PQSVTVVTRELIEDQGATSLADALRNVPGVTFGAGEGGNGD----SFSIRGFSASGDIY--VDGLRDPGQYR---RDTF- 79
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1248244047 124 ahseMAQRIEVLKGPGSALYGSNAVHGVINVIT--PDTTQGGGlVGLDYGSYGYARYKLRAGQDYG-NSGIGINASVTDD 200
Cdd:COG4774 80 ----NLERVEVLKGPASVLYGRGSPGGVINLVTkrPTDEPFTE-VTLTYGSDGQRRATLDVNGPLGdDLAYRLNGMYRDS 154
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1248244047 201 TGYRDDESVKQQKINIRHRFEHS-NLLLTSGLTYTNLDQHTAGFITGFESYKNEDIAQQNF--DPDAFRKARSFRAWSNA 277
Cdd:COG4774 155 DSYRDGVDNDRWGIAPSLTWRLGdRTRLTLDYEYQDDDRTPDYGVPAVANGRPVDVDRSTFygQPDDYSDSETDSATLRL 234
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1248244047 278 QWQLKNGNVLSITPYVRDQSMDFFkhflPGTPLETNSQTGIGVQSLYQH----------NLQSNV-------KVNLGLDG 340
Cdd:COG4774 235 EHDFNDNWTLRNALRYSDYDRDYR----NTYPTGGNATGTVTRSAYRRDqdndtlsnqtDLTGKFdtggvkhTLLAGVEY 310
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1248244047 341 EYTRSDFTQSQNEPTQGSAFLVATVP-------QGKHYDYDVNATLYAPFASVEWQLN-KWFISAGLRYEHMQYDYTNNm 412
Cdd:COG4774 311 SREDSDNARYSGGGTAPTVNLYNPVYgapvtgpTLGGADNDSRTDTTGLYLQDTISLTdRWSLLAGLRYDRFDTDYTDR- 389
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1248244047 413 LTGRTTEDgtecgfggcrysrpasgkNSFSNTSPKFGVSYKANKNNTLYANFSRGYRAPQAAelyqLQREQTTADLNPEI 492
Cdd:COG4774 390 TTGATTSS------------------YDDSAFSPRAGLVYKPTPNLSLYASYSTSFNPGGGA----PSLSNAGQALDPEK 447
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1248244047 493 ANNAELGLKgyYS----NVSYALAVYAMSKHNTIYRDSDFFN--VNDGSSRHRGIELEVDYALSKTLNLQFAGTHAKHTY 566
Cdd:COG4774 448 SRQYEVGVK--WDlldgRLSLTAALFRIEKTNVRTTDPANPGvyVQTGEQRSRGVELEATGELTPGWSVLAGYTYLDAEI 525
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1248244047 567 TNNQLINGLNINGNNVdtaPRNVANLDLTWQ-AFNNLALALQWHSVSSYYTDPENLHSYEGHDILSLRAKWQVTNNLEVL 645
Cdd:COG4774 526 TKSANAANVGNRLPNV---PRHSASLWTTYDlPLPGLTLGGGVRYVGSRYADAANTVKLPSYTRFDAGASYRLNKNLTLR 602
|
650 660 670 680
....*....|....*....|....*....|....*....|.
gi 1248244047 646 ARIINLTDEAYAEradyTSFTGDRYFPGKPRNAMLSATYTW 686
Cdd:COG4774 603 LNVNNLTDKRYYA----SAYGSGYVTPGAPRTVLLSASYRF 639
|
|
| ligand_gated_channel |
cd01347 |
TonB dependent/Ligand-Gated channels are created by a monomeric 22 strand (22,24) ... |
46-686 |
2.71e-60 |
|
TonB dependent/Ligand-Gated channels are created by a monomeric 22 strand (22,24) anti-parallel beta-barrel. Ligands apparently bind to the large extracellular loops. The N-terminal 150-200 residues form a plug from the periplasmic end of barrel. Energy (proton-motive force) and TonB-dependent conformational alteration of channel (parts of plug, and loops 7 and 8) allow passage of ligand. FepA residues 12-18 form the TonB box, which mediates the interaction with the TonB-containing inner membrane complex. TonB preferentially interacts with ligand-bound receptors. Transport thru the channel may resemble passage thru an air lock. In this model, ligand binding leads to closure of the extracellular end of pore, then a TonB-mediated signal facillitates opening of the interior side of pore, deforming the N-terminal plug and allowing passage of the ligand to the periplasm. Such a mechanism would prevent the free diffusion of small molecules thru the pore.
Pssm-ID: 238657 [Multi-domain] Cd Length: 635 Bit Score: 213.47 E-value: 2.71e-60
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1248244047 46 TISTLSEAQLNSIAPTHVEESLQRIAGANVQRGNGQEYlpalRSPVLSGAAAcGGILTLEDGIPLRAAGFCNINELFEAH 125
Cdd:cd01347 1 SVSVITAEDIEKQPATSLADLLRRIPGVSVTRGGGGGG----STISIRGFGP-DRTLVLVDGLPLASSNYGRGVDLNTIP 75
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1248244047 126 SEMAQRIEVLKGPGSALYGSNAVHGVINVITPD-TTQGGGLVGLDYGSYGYAryklragqDYGNSGIGINASVTDDTG-- 202
Cdd:cd01347 76 PELIERVEVLKGPSSALYGSGAIGGVVNIITKRpTDEFGGSVTAGYGSDNSG--------SSGGGGFDVSGALADDGAfg 147
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1248244047 203 ------YRDDESVKQQKINIRHRFeHSNLLLTSGLTYTNLDQHTAGFITGFESYKN-EDIAQQNFDPDAFRKARSFRAWS 275
Cdd:cd01347 148 arlygaYRDGDGTIDGDGQADDSD-EERYNVAGKLDWRPDDDTRLTLDAGYQDQDAdGPGGTLPANGTGSSLGGGPSSNT 226
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1248244047 276 NAqWQLKNGNVLSITPYVRDQSMDFFKHFLPGTPLETNSQTGIGVQSLYQHNLQSNVKVNLGLDGEYTRSDFTQSQNEPT 355
Cdd:cd01347 227 NG-DRDWDYRDRYRKRASLGLEHDLNDTGWTLRANLSYSYTDNDGDPLILNGGNNAAGGDLGRSGYSSERDTTQLGFDAG 305
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1248244047 356 QGSAFLVATVPQ-----GKHYDYDVNATLYAPFASVEWQLN-KWFISAGLRYEHMQYDYTNNMLTGRTTedgtecgfggc 429
Cdd:cd01347 306 LNAPFGTGPVAHtltlgVEYRREELDEKQTALYAQDTIELTdDLTLTLGLRYDHYDQDSKDTIAGGTTA----------- 374
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1248244047 430 rysrpasgKNSFSNTSPKFGVSYKANKNNTLYANFSRGYRAPQAAELYQLQREQTTA-----DLNPEIANNAELGLKGYY 504
Cdd:cd01347 375 --------KKSYSHWSPSLGLVYKLTDGLSLYASYSQGFRAPSLGELYGGGSHGGTAavgnpNLKPEKSKQYELGLKYDP 446
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1248244047 505 SNVSYA-LAVYAMSKHNTIYRDSD-------FFNVNDGSSRHRGIELEVDYALSKTLNLQFAGTHAKhtytNNQLINGLN 576
Cdd:cd01347 447 GDGLTLsAALFRIDIKNEIVSTPTntglglvTVYVNGGKARIRGVELEASYDLTDGLGLTGSYTYTD----TEVKRTDGA 522
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1248244047 577 INGNNVDTAPRNVANLDLTWQA-FNNLALALQWHSVSSYYTDPENL---HSYEGHDILSLRAKWQVTNNLEVLARIINLT 652
Cdd:cd01347 523 TTGNRLPGIPKHTANLGLDYELpDEGLTAGGGVRYRGKQYADTANGnntVKVPGYTLVDLSASYQFTKNLTLRLGVNNLF 602
|
650 660 670
....*....|....*....|....*....|....
gi 1248244047 653 DEAYaERADYTSFTGDRYFPGKPRNAMLSATYTW 686
Cdd:cd01347 603 DKDY-YTSLSVRGSGLYGYYGPGRTYYLSVSYKF 635
|
|
| FhuE |
COG4773 |
Outer membrane receptor for ferric coprogen and ferric-rhodotorulic acid [Inorganic ion ... |
28-686 |
4.63e-54 |
|
Outer membrane receptor for ferric coprogen and ferric-rhodotorulic acid [Inorganic ion transport and metabolism];
Pssm-ID: 443805 [Multi-domain] Cd Length: 692 Bit Score: 197.42 E-value: 4.63e-54
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1248244047 28 TITTTASRTEA--LATPYplTISTLSEAQLNSIAPTHVEESLQRIAGANVQRGNGQEY-LPALRspvlsGAAAcggILTL 104
Cdd:COG4773 50 KSSSTATKLDTplRETPQ--SVSVVTRQLIEDQGATTLDDALRNVPGVTVSSYDGGGRdSFSIR-----GFSI---DNYL 119
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1248244047 105 EDGIPLRAAGFCNINelfeahSEMAQRIEVLKGPGSALYGSNAVHGVINVIT--PDTTQGGGlVGLDYGSYGYARYKL-- 180
Cdd:COG4773 120 RDGLPLGGFGGGQPD------TANLERVEVLKGPAGLLYGAGSPGGLVNLVTkrPTAEPQGE-VSLSAGSWDTYRATAdv 192
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1248244047 181 --RAGQDyGNSGIGINASVTDDTGYRDDESVKQQ--------KINirhrfehSNLLLTSGLTYTNLDQH-TAGFITGFES 249
Cdd:COG4773 193 ggPLNED-GTLRYRLNAAYEDGDSFRDGVDNRRTliapsldwDLT-------DDTTLTLGAEYQDDDSTgDRGFLPLDGT 264
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1248244047 250 YKNEDIAQQNFDPDAFRKARSFRAWSNAQWQLKNGNVLSITPYVRDQSMDFFKHFLPGTPLETNS----QTGIGVQSLYQ 325
Cdd:COG4773 265 LLDLPRSTNLGEPWDYYDTETTTLFAELEHRFNDDWSLRANARYSDSDRDGRSAYAYGAPDAATGtltrYASARDGDSRS 344
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1248244047 326 HNLQSNV-----------KVNLGLDGEYTRSDFTQSQNEPT--QGSAFLVATVPQGKHYDYDVNATLYAPFASVEWQLN- 391
Cdd:COG4773 345 DSLDANLngkfetgglehTLLVGADYSRYDSDSDSATAGTIniYNPVYGNLPEPDFDASDTDTTTRQTGLYAQDQISLTd 424
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1248244047 392 KWFISAGLRYEHMQYDYTNNMLTGRTTEDGTEcgfggcrysrpasgknsfsnTSPKFGVSYKANKNNTLYANFSRGYRaP 471
Cdd:COG4773 425 RLSLLLGGRYDWYETDSTNRLGGSTTSYDDSA--------------------FTPRAGLVYDLTPGLSLYASYSESFE-P 483
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1248244047 472 QAAelyqlqREQTTADLNPEIANNAELGLKGYYSN--VSYALAVYAMSKHNTIYRDSD--FFNVNDGSSRHRGIELEVDY 547
Cdd:COG4773 484 QSG------ADNNGNPLDPETGKQYEAGVKGELFDgrLNATLAVFDITQKNVATTDPDnpNFYVQVGEVRSRGVELELSG 557
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1248244047 548 ALSKTLNLQFAGTHAKHTYTNNqlinGLNINGNNVDTAPRNVANL----DLTWQAFNNLALALQWHSVSSYYTDPENLHS 623
Cdd:COG4773 558 ELTPGLNLIAGYTYTDAKITKD----ADALEGKRLTNVPRHTASLwttyRFPSGALKGLGLGGGVRYVGERYGDAANTFT 633
|
650 660 670 680 690 700
....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1248244047 624 YEGHDILSLRAKWQVTNNLEVLARIINLTDEAYAEradyTSFTGDRYFPGKPRNAMLSATYTW 686
Cdd:COG4773 634 LPSYTLVDAGARYDLGKNWTLQLNVNNLFDKKYYA----SSGSRGYVYYGAPRNVRLSLSYKF 692
|
|
| TonB_dep_Rec |
pfam00593 |
TonB dependent receptor; This model now only covers the conserved part of the barrel structure. |
202-685 |
2.49e-41 |
|
TonB dependent receptor; This model now only covers the conserved part of the barrel structure.
Pssm-ID: 395474 [Multi-domain] Cd Length: 475 Bit Score: 157.24 E-value: 2.49e-41
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1248244047 202 GYRDDESVKQQKINIRHRFEHSNLLLTSGLTYTNLDQHTAGFITGFESYKNEDiAQQNFDPDAFRKARSFRAWSNAQWQL 281
Cdd:pfam00593 1 GWQLSLDLLGDDTLLTLGYDYSRYTDGLDLGLTLDGYGNDGGYLGDRPLYYGR-DYSDTDRKRLSLGYDYDLGDGLSWLS 79
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1248244047 282 KNGNVLSITPYVRDQSMDFFKHFLPGTPLETNSQ-TGIGVQSLYQHNLQSNVKVNLGLDGEYTRSDFTQSQNEPTQGSAF 360
Cdd:pfam00593 80 TLRLGLRYSSLDGDYTSNSSGLSGAGDYLSDDRLyGLYGLDGDLELSLDLSHDLLLGVELRTAGLDYRRLDDDAYDPYDP 159
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1248244047 361 LVATVPQGKHYDYDVnatlYAPFASVEWQL-NKWFISAGLRYEHMQYDYTNNMLTGRTTedgtecgfggcrysrpasgKN 439
Cdd:pfam00593 160 ANPSSSSYSDTTTDS----YGLYLQDNIKLtDRLTLTLGLRYDHYSTDGDDGNGGGDNF-------------------SR 216
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1248244047 440 SFSNTSPKFGVSYKANKNNTLYANFSRGYRAPQAAELYQLQREQTTA-------DLNPEIANNAELGLKGYYSNVSYALA 512
Cdd:pfam00593 217 SYSAFSPRLGLVYKPTDNLSLYASYSRGFRAPSLGELYGSGSGGGGGavaggnpDLKPETSDNYELGLKYDDGRLSLSLA 296
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1248244047 513 VYAMSKHNTIYRDSD--------FFNVNDGSSRHRGIELEVDYALsktlnLQFAGTHAKHTYTNNQLINGLNINGNNVDT 584
Cdd:pfam00593 297 LFYIDIKNLITSDPDgpglggtvYTYTNVGKARIRGVELELSGRL-----WGLGLSGGGYTYTDADDDADADDTGNPLPN 371
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1248244047 585 APRNVANLDLTWQAFN---NLALALQWHSVSS-YYTDPENLHSYEGHDILSLRAKWQVTNNLEVLARIINLTDEAYAERA 660
Cdd:pfam00593 372 VPRHTANLGLTYDFPLggwGARLGARYVGSGErRYGDAANTFKTPGYTLVDLSAGYRLNKNLTLRLGVNNLFDKYYKRYY 451
|
490 500
....*....|....*....|....*
gi 1248244047 661 DYTSFTGDRYfPGKPRNAMLSATYT 685
Cdd:pfam00593 452 SSGGGNLGGY-PGPGRTFYLGLSYK 475
|
|
| TonB-siderophor |
TIGR01783 |
TonB-dependent siderophore receptor; This subfamily model encompasses a wide variety of ... |
43-684 |
2.38e-36 |
|
TonB-dependent siderophore receptor; This subfamily model encompasses a wide variety of TonB-dependent outer membrane siderophore receptors. It has no overlap with TonB receptors known to transport other substances, but is likely incomplete due to lack of characterizations. It is likely that genuine siderophore receptors will be identified which score below the noise cutoff to this model at which point the model should be updated. [Transport and binding proteins, Cations and iron carrying compounds, Transport and binding proteins, Porins]
Pssm-ID: 273805 [Multi-domain] Cd Length: 651 Bit Score: 145.25 E-value: 2.38e-36
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1248244047 43 YPLTISTLSEAQLNSIAPTHVEESLQRIAGANVQRGNGQEYLPALRSPVLSGAAACGGILTleDGIPLRAAGfcninELF 122
Cdd:TIGR01783 2 IPQSVSVITRQELEDQQAGSLSEALQRVPGVVVGGSGGTTQFGNITIRGFGLEVDIDNVYL--DGVPLLSRG-----NLA 74
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1248244047 123 EAHSEMAQRIEVLKGPGSALYGSNAVHGVINVIT--PDTTQGGGlVGLDYGSYGYARYKLRAGQDYGNSG-IG--INASV 197
Cdd:TIGR01783 75 IVDPAMVERVEVLRGPASLLYGGSAPGGVINIVTkrPQDEPKGS-VTFGAGTRSGYRTAFDLGGPLGADGtFRgrLNGAR 153
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1248244047 198 TDDTGYRDDESVKQQKINIRHRFEHS-NLLLTSGLTYTNLDQHTAGFITGFESYKNEDIAQQNFDPDAFRKARSFRAWSN 276
Cdd:TIGR01783 154 QDGDSFYDGAGEETRLGATATDWQLDdRTLLRLGAYYQKERDRGGYGGLPASGGTSGRDLSSDRYLGTSSNRNYDDREYL 233
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1248244047 277 A-----QWQLKNG----NVLSITPYVRDQSMDFFKHFlpgtpleTNSQTGIGVQSLYQHNLQSNVKVNLGLDGEYTRSDF 347
Cdd:TIGR01783 234 SyglslEYQFNDVwtgkQNLRYSYFDTDSNQVQASGY-------SSDGGLFGRSLTVVNVKQDRVQIDAGLDGEFETGPI 306
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1248244047 348 TQ-----------------SQNEPTQGSAFLVATVPQGkhYDYDVNATLYAP----FASVEWQLN------KWFISAGLR 400
Cdd:TIGR01783 307 EHdlllgvsygqrttnrfnNTGYPSDNIYSLTATSSAR--TDIGDSPKDRALssttKALNGVALQrilladKWTLTLGGR 384
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1248244047 401 YEHMQYDyTNNMLTGRTTEDgtecgfggcrysrpasgknSFSNTSPKFGVSYKANKNNTLYANFSRGYRAPQAAELYQLQ 480
Cdd:TIGR01783 385 YDSVDVK-SNNGVAGSTGKR-------------------DDSQFTPSLGVAYKPTDDWSLYASYAESFKPGGYYPKGAGN 444
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1248244047 481 REQttaDLNPEIANNAELGLKGYYSNV-SYALAVYAMSKHNTIYRDS--DFFNVNDGSSRHRGIELEVDYALSKTLNLQF 557
Cdd:TIGR01783 445 SGD---ILEPEKGKNYELGVRYDLGDSlLATAALFRITKDNQLVQDPvnGTFSVNAGKTRNRGVELEARGYLTPGLSLSA 521
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1248244047 558 AGTHAKHTYTNnqlINGLNINGNNVDTAPRNVANLDLTWQAF---NNLALALQWHSVSSYYTDPENLHSYEGHDILSLRA 634
Cdd:TIGR01783 522 GYTYTDAEFTE---DTNGDTQGNTVPFVPKHTASLWASYAPPvgdNGLTLGGGVQYTGKAYVDGGNTGKVPSYTVVDLSV 598
|
650 660 670 680 690
....*....|....*....|....*....|....*....|....*....|...
gi 1248244047 635 KWQVTNNLEVLAR--IINLTDEAYAERA-DYTSFTGDryFPGKPRNAMLSATY 684
Cdd:TIGR01783 599 RYDLTKKKNLTLAlnVNNLFDRDYYTSGyRWGPSAYI--YPGAPRTVGLSVSY 649
|
|
| TonB-hemin |
TIGR01785 |
TonB-dependent heme/hemoglobin receptor family protein; This model represents the ... |
27-686 |
1.45e-30 |
|
TonB-dependent heme/hemoglobin receptor family protein; This model represents the TonB-dependent outer membrane heme/hemoglobin receptor/transporter found in bacteria which live in contact with animals (which contain hemoglobin or other heme-bearing globins) or legumes (which contain leghemoglobin). Some species having hits to this model such as Nostoc, Caulobacter and Chlorobium do not have an obvious source of hemoglobin-like proteins in their biological niche and so the possibility exists that they act on some other substance. [Transport and binding proteins, Cations and iron carrying compounds, Transport and binding proteins, Porins]
Pssm-ID: 273807 [Multi-domain] Cd Length: 665 Bit Score: 127.89 E-value: 1.45e-30
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1248244047 27 ETITTTASRTEALATPYPLTISTLSEAQLNSIAPTHVEESLQRIAGANV---QRGNGQeylpalrSPVLSGAAAcGGILT 103
Cdd:TIGR01785 2 DTVTVTATRTRQVLSEAPASVSVISGEQIESKQANNLADALNTVPGVDVtggGRPPGQ-------SINIRGLQD-NRVLV 73
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1248244047 104 LEDGIPLRAAGFCNINELFEAHSEMAQRIEVLKGPGSALYGSNAVHGVINVITPDTT-------QGGGLVGLDYGSYGYA 176
Cdd:TIGR01785 74 VVDGARQNYQRGGAHNGSLFVDPELLKRIEIVKGPSSSLYGSGALGGVVAFRTKDAAdllrpgqLFGGLAKLSYGSNNNS 153
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1248244047 177 RykLRAGQDYGNSGIGINASVTDdtGYRDDESVKQ-QKINIRHRFEHSNLLLTSGLTYTNLDQHTAgfITGFESYKNEDI 255
Cdd:TIGR01785 154 F--GGSVAVAGRLDDNLDALVAA--TYRDGGNYRNgNKEEATNSAYVQKNLLAKLGWQLDDAQRLE--FSYFTTEGSLDE 227
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1248244047 256 AQQNFDPDAF----------RKARSFRAWSNAQWQLKNGNVLS--ITPYVRDQSMDffkHFLPGTPLETNSQT-----GI 318
Cdd:TIGR01785 228 AQNSGPGTEYvlgssstllaSSTRDRSATLTYNWTPEDNPWLDatASLYYNRTEND---NDRSARGVGREEGYqyttyGA 304
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1248244047 319 GVQSLYQHNLQSNVKVNLGLDGEYTRsdftqsqnepTQGSAFLVATVPQGKHYDYDVNATLYAPFASVEWQL--NKWFIS 396
Cdd:TIGR01785 305 TLQNTSRFDVASWSTLTYGVDWMKDK----------RRTESFDPNSVTTIVPNPPSAKEYFFGLFLQDNIPLldDRLTLS 374
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1248244047 397 AGLRYEHMQYDytnnmltGRTTEDgtecgfggcrYSRPASGKNSFsntSPKFGVSYKANKNNTLYANFSRGYRAPQAAEL 476
Cdd:TIGR01785 375 AGLRYDHYKLS-------PKTTAD----------TEAVDRSYSRW---SPSLGLSYKPVDWLTLYASYSQGFRAPSIDEL 434
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1248244047 477 YQLQREQTTA---------DLNPEIANNAELGLKGYYSNVSYA---LAVYAMSKHNtiyRDSDFFN-------------- 530
Cdd:TIGR01785 435 YGTGDHPGTPggytfapnpNLKPETSKTWELGANLSFDNLLLDndqLQFKVAYFYN---DVKDFIDltigvtdnvtagmn 511
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1248244047 531 -----VNDGSSRHRGIELEVDYALSKtLNLQFAGTHAKHTYTN-NQlinglningnNVDTAPRNVANLDLTWQAFN-NLA 603
Cdd:TIGR01785 512 nitqyVNIDGARIRGIEASASYDAGL-WATGLSYGYTIGKDQNtNQ----------WLSNIPPLKLVVTVGYRFPDrRLD 580
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1248244047 604 LALQWHSVSSYYTDPE-------NLHSYEGHDILSLRAKWQVTNNLEVLAR--IINLTDEAYAERADY-TSFTGdryfpg 673
Cdd:TIGR01785 581 LGAKAAYYERQSESPTtedvaanGLLTTPGYTVVDLYATYQPNAVKGLTVRfgVNNLTDRKYTPAQSVpGAGPG------ 654
|
730
....*....|...
gi 1248244047 674 kpRNAMLSATYTW 686
Cdd:TIGR01785 655 --RNFKGSVKYQF 665
|
|
| BtuB |
COG4206 |
Outer membrane cobalamin receptor protein BtuB [Coenzyme transport and metabolism]; |
29-316 |
2.08e-28 |
|
Outer membrane cobalamin receptor protein BtuB [Coenzyme transport and metabolism];
Pssm-ID: 443355 [Multi-domain] Cd Length: 276 Bit Score: 114.97 E-value: 2.08e-28
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1248244047 29 ITTTASRTEALATPYPLTISTLSEAQLNSIAPTHVEESLQRIAGANVQR--GNGQEYLPALRspvlsGAAAcGGILTLED 106
Cdd:COG4206 1 VVVTATRLEQSKSDLTGSVTVIDAEELERSGATSLADALRRVPGVQVSSsgGPGSAASISIR-----GLGS-NQTLVLID 74
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1248244047 107 GIPLRAA--GFCNINELfeaHSEMAQRIEVLKGPGSALYGSNAVHGVINVITPDTTQGGGL-VGLDYGSYGYARYKLRAG 183
Cdd:COG4206 75 GVPLNDPslGGVDLSLI---PPDDIERIEVLKGAASALYGSDAIGGVINITTKKGKKGFKGsVSASYGSFGTRRLSASLS 151
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1248244047 184 QDYGNSGIGINASVTDDTGYRDDESVKQQKINIRhrfehsNLLLTSGLTYTNLDQHTAGFITGFESYKNediaqqNFDPD 263
Cdd:COG4206 152 GGAGKFSYSLSASYRRSDGYRYNDPDLRNNDGYE------NTSLNARLGYKLGDNGSLSLSGGYSDSER------GYPGA 219
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|...
gi 1248244047 264 AFRkARSFRAWSNAQWQLKNGNVLSITPYVRDQSMDFFKHFLPGTPLETNSQT 316
Cdd:COG4206 220 VGS-DRNLRLSLSLEYKLSDGWSLLLLAYYYYDRDYEDGGGDSAGTSNTDGAR 271
|
|
| TonB-B12 |
TIGR01779 |
TonB-dependent vitamin B12 receptor; This model represents the TonB-dependent outer membrane ... |
25-685 |
1.94e-24 |
|
TonB-dependent vitamin B12 receptor; This model represents the TonB-dependent outer membrane receptor found in gamma proteobacteria responsible for translocating the cobalt-containing vitamin B12 (cobalamin). [Transport and binding proteins, Other, Transport and binding proteins, Porins]
Pssm-ID: 273802 [Multi-domain] Cd Length: 614 Bit Score: 108.41 E-value: 1.94e-24
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1248244047 25 AIETITTTASRTEALATPYPLTISTLSEAQLNSIAPTHVEESLQRIAGANVQRGNGQEYLPALrspVLSGAAAcGGILTL 104
Cdd:TIGR01779 27 PLDTVVVTANRFAQTASQTLAPVTIITRQDIERTQAKSLPELLRRLPGVSIAQNGGRGQNTSL---FLRGTES-DHVLVL 102
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1248244047 105 EDGIPL--RAAGFCNINELfeaHSEMAQRIEVLKGPGSALYGSNAVHGVINVITPDTTQGGG-LVGLDYGSYGYARYKLR 181
Cdd:TIGR01779 103 IDGIRFgsAAAGAADFQQL---PVELVERIEYVRGPRSSLYGSEAIGGVINIITRRRSGGQGtTLSAGLGSLDYQEYSIA 179
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1248244047 182 AGQDYGNSG-IGINASVTDDTGYRDDESVKQQKINIRHRFEHSNLLLTSGLTYtnlDQHTAGFITGFeSYKNediaQQNF 260
Cdd:TIGR01779 180 SGVAIGENGwYSVALGTESTKGINVRPGGPGVYDPDRDGFRSDSLLLGGGHRF---DESWSLFVNAL-RYEN----RNDY 251
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1248244047 261 DPDAFrkarsfrawsnaqwqlknGNVLSITPYVRDQSMDFFKHFL-PGTPLETNSQTGigvqslyqhnlQSNVKVNLGLD 339
Cdd:TIGR01779 252 DNYSF------------------GTRLYKEAEKGDQSFTGGRQRQsERDVSELTLSTG-----------KSKDWDYAYSK 302
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1248244047 340 GEY-TRSDF-----TQSQNEPTQGSAFLVA---------TVPQGKHYDYDVNATlyAPFASVEWQLNKWFISAGLRYEhm 404
Cdd:TIGR01779 303 GRYsSTSDTreqrnIQWQNDLLVGDGWVLAggvdwqkdsIISSTADKEDDRSNT--AAFAQVLQQWGQQLLEASLRRD-- 378
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1248244047 405 qydytNNMLTGRTTEDGTECGFggcrysrpasgknsfsNTSPKFGVSykanknntlyANFSRGYRAPQAAELYqlQREQT 484
Cdd:TIGR01779 379 -----DNQQFGSHTTGSIAWGY----------------QFIEELRFT----------ASYGTAFKAPNLNQLY--YPSYG 425
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1248244047 485 TADLNPEIANNAELGLKGYYSNVSYALAVYAMSKHNTIYRDSDFFNV--NDGSSRHRGIELevdyalskTLNLQFAG-TH 561
Cdd:TIGR01779 426 NPNLQPETSKSAELGFYGLFSGGKWSISGYRTKINDLIDYDSHPKGYpnNIGEARIKGVEA--------TAEFATGGwTH 497
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1248244047 562 -AKHTYTNNQLINGLningnnvDTAPR---NVANLDLTWqAFNNLALALQWHSVSSYYTDPENLHSYE-----GHDILSL 632
Cdd:TIGR01779 498 qLSVDLLDAQNVNTG-------NTLPRrarQMYKWNADR-AFEQFDWGASYQYVGKRYDDDYNTYPTQnvrlgGYSLLDL 569
|
650 660 670 680 690
....*....|....*....|....*....|....*....|....*....|...
gi 1248244047 633 RAKWQVTNNLEVLARIINLTDEAYaERAdytsftgdRYFPGKPRNAMLSATYT 685
Cdd:TIGR01779 570 RVSYYVTDSWTVQGRIANLFDKDY-ETA--------YGYPQAGRAYYLSIRYQ 613
|
|
| TonB-hemlactrns |
TIGR01786 |
TonB-dependent hemoglobin/transferrin/lactoferrin receptor family protein; This model ... |
27-686 |
1.43e-20 |
|
TonB-dependent hemoglobin/transferrin/lactoferrin receptor family protein; This model represents a family of TonB-dependent outer membrane receptor/transporters acting on iron-containing proteins such as hemoglobin, transferrin and lactoferrin. Two subfamily models with a narrower scope are contained within this model, the heme/hemoglobin receptor family protein model (TIGR01785) and the transferrin/lactoferrin receptor family model (TIGR01776). Accessions which score above trusted to this model while not scoring above trusted to the more specific models are most likely to be hemoglobin transporters. Nearly all of the species containing trusted hits to this model have access to hemoglobin, transferrin or lactoferrin or related proteins in their biological niche. [Transport and binding proteins, Cations and iron carrying compounds, Transport and binding proteins, Porins]
Pssm-ID: 273808 [Multi-domain] Cd Length: 715 Bit Score: 96.71 E-value: 1.43e-20
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1248244047 27 ETITTTASRTEALA----TPYPLTISTLSEAQLNSIAPTHVEESLQRIAGANV---QRGNGQEYlpALRSpvLSGAaacg 99
Cdd:TIGR01786 1 DTITVTATRTADPQrrdlSVTPASVSVISREQLKSQQVRNLRDLLRYEPGVSVvegGRGGSQGI--NIRG--LDKN---- 72
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1248244047 100 GILTLEDGIPL------RAAGFCNINELfeaHSEMAQRIEVLKGPGSALYGSNAVHGVINVITPDTT-------QGGGLV 166
Cdd:TIGR01786 73 RVAVLVDGIRQntsyggQGSTFYAINSI---DPELIKSIEIVKGASSSLYGSGALGGVVAFRTKDAAdllkpgkDLGGLS 149
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1248244047 167 GLDYGS-----------------------YGYARYK-LRAGqDYGNSGIGINASVTDDTGYRDdESVK---QQKINIRHR 219
Cdd:TIGR01786 150 KLGYSSannrftqsvaaagrnddvdalvqATYRRGHeLKNG-NKANIGNESKRSKPNPSDYKS-QSFLaklGWQLNDAHR 227
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1248244047 220 FEHSnllltsgLTYTNLDQHTAGFITGfESYKNEDIAQQNFDPDAFRKARSFRAWSNAQWQLKNGNVL-----------S 288
Cdd:TIGR01786 228 LGLS-------LEYTQTDYDEPEMTNT-SYLTKPLGAPLLSSTVVLGDSKTRDRRTGLDYELNPDNSWldtvklaldkqY 299
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1248244047 289 ITPYVRDQSMDFFKHflPGTPLETNSQTGIGVQ----SLYQHNLQSNVKVNLGLDGEYTRSDFTQS---QNEPTQGSAFL 361
Cdd:TIGR01786 300 IQLYNYLNATSASDY--PGVDKNGRYKDKYDYYtlgfDTNNKIEFSVHSLSLTYGLDRFKDKVSTGdsrRNLPTAAYNLY 377
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1248244047 362 VATVPQGKhydydVNATLYAPFASVEWQLNKWF-ISAGLRYEHMQYDYTNNMLTGRTTEDGTECGFggcrysrpasgkns 440
Cdd:TIGR01786 378 GYEGENRP-----VKGSNFGLFLQDNIKLGDWLsLSAGLRYDHYKTDPKADESKDYGAISKTYSRW-------------- 438
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1248244047 441 fsntSPKFGVSYKANKNNTLYANFSRGYRAPQAAELYQLQREQTTA--------DLNPEIANNAELGLKG---------- 502
Cdd:TIGR01786 439 ----SPSLGLTYKPTPWLTLYYSYSQGFRAPSFDELYGTGAHPGGGpytflpnpNLKPETSKNWEIGINLhfdqldfkvs 514
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1248244047 503 -YYSNVS--YALAVYAMSKHN-TIYRDSDFFN-VNDGSSRHRGIELEVDY------ALSKTLNLQFAGTHAKHTYTNNQL 571
Cdd:TIGR01786 515 yFRNDYKdfIDLGIGVTAKGNmAQVGSNTITNyVNIDNARIRGIELSGRYdlgsffSGPDGWTTTLKYGYTKGKDSDTNP 594
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1248244047 572 INGLNINGNNVDT----APRNVANLDLTWQAFN-NLALALQWHSVSSYYTDPENLHSYEGHDILSLRAKWQVTNNLEVLA 646
Cdd:TIGR01786 595 WLNAITPLKVVLGlgydHPDEKWGVGLTLTFSGaKDAVDAYATYYENGEAAKAGPLRTPSYTVVDLYGYYKPNKNLTLRF 674
|
730 740 750 760
....*....|....*....|....*....|....*....|.
gi 1248244047 647 RIINLTDEAYAERAD-YTSFTGDRYFPGKPRNAMLSATYTW 686
Cdd:TIGR01786 675 GVYNLLDRKYTTWESaRQAGPLATGYTAPGRNYKASVEYKF 715
|
|
| PRK13483 |
PRK13483 |
ligand-gated channel protein; |
16-654 |
2.17e-15 |
|
ligand-gated channel protein;
Pssm-ID: 184080 [Multi-domain] Cd Length: 660 Bit Score: 79.82 E-value: 2.17e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1248244047 16 AIADNKNDDAIETITTTASRTEALATPYPLTISTLSEAQLNSIAPTHVEESLQRIAGANVQ----------RGNGQEYLP 85
Cdd:PRK13483 23 ALAQAAPDKTMETVVVTASGYEQQIRDAPASISVITREDLENRFYRDLTDALLDVPGVVVTgggdrtdislRGMGSQYTL 102
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1248244047 86 AL----------RSPVLSGAAACGGILTledgiPLRAAgfcninelfeahsemaQRIEVLKGPGSALYGSNAVHGVINVI 155
Cdd:PRK13483 103 ILvdgkrqssreTRPNSDGPGVEQAWTP-----PLAAI----------------ERIEVIRGPMSSLYGSDAIGGVINII 161
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1248244047 156 T---PDTTQGGglVGLDygsygyarYKLRAGQDYGNSGIG---INASVTDDT------GyrddESVKQQKINIRHRFE-H 222
Cdd:PRK13483 162 TrkvPNEWQGE--VRLD--------TTLQENSDSGNVYQAnffVNGPLIKDLlglqlyG----QYTQREEDDIEGGYRdK 227
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1248244047 223 SNLLLTSGLTYTNLDQHTAGFITGFESYKNEDIAQQNFDPDAFRKARSFRAwsnaqwqlknGNVLSITPYVRDqsmdffk 302
Cdd:PRK13483 228 DARSLTAKLALTPNEDHDIMLEVGTSNQERDSTVGKTVAPLAPGESCGRRG----------CPESSTTEYERS------- 290
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1248244047 303 HFlpgtPLETNSQTGIGVQSLYqhnLQSNVKVNLGLDGEYTRSDFTQSQNEPTqGSAFLVATVPQGKHYDY--------- 373
Cdd:PRK13483 291 TV----SLSHTGRWDFGTSDTY---IQHEEFDNKSREMKIKNTDFQSSLVAPL-GQEHTLTFGAAYNHQDLtdetsnqis 362
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1248244047 374 ---DVNATLYAPFASVEWQLNKWF-ISAGLRYEHMQydytnnmltgrttedgtecGFGGcrysrpasgknsfsNTSPK-F 448
Cdd:PRK13483 363 dltDISRTQWAVFSEDEWRIADDFaLTGGLRLDHDE-------------------NFGG--------------HVSPRvY 409
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1248244047 449 GVsYKANKNNTLYANFSRGYRAPQ----AAELYQLQREQT---TADLNPEIANNAELGLkgYYSNVSyALAVYAMSKHN- 520
Cdd:PRK13483 410 GV-WNLAPSWTVKGGVSTGFRAPSlrqtTPDWGQVSRGGNiygNPDLKPETSLNKELGL--YYDLGS-GLTASLTVFYNe 485
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1248244047 521 ------------TIYRD------SD---FFNVNDGSSrhRGIELEVDYALSKTLNLQfagthAKHTYTNNQlINGLNING 579
Cdd:PRK13483 486 fkdkitrvacpaTQCTDgpnqfgADpttYVNIDEAVT--QGVEASLSYPITSTLSLS-----GNYTYTDSE-QKSGAYKG 557
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1248244047 580 NNVDTAPRNVANLDLTWQAFNNLALALQWH-----------SVSSYYTDPenlhSYEghdILSLRAKWQVTNNLEVLARI 648
Cdd:PRK13483 558 SPLNQLPKHLFQASLNWEPTDRLNSWARVNyrgeesqpttgPSSSSFIAP----SYT---FLDLGANYQLTDNLKLSAGI 630
|
....*.
gi 1248244047 649 INLTDE 654
Cdd:PRK13483 631 YNLFDK 636
|
|
| PRK13486 |
PRK13486 |
TonB-dependent receptor; |
24-670 |
6.63e-15 |
|
TonB-dependent receptor;
Pssm-ID: 139606 [Multi-domain] Cd Length: 696 Bit Score: 78.52 E-value: 6.63e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1248244047 24 DAIETITTTASRTEALATPYPLTISTLSEAQLNSIAPTHVEESLQRIAGANVQRGNGQ--------EYLPALRSPVLSGA 95
Cdd:PRK13486 23 AAEDVMIVSASGYEKKLTNAAASVSVISQEELQSSQYHDLAEALRSVEGVDVESGTGKtggleisiRGMPASYTLILIDG 102
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1248244047 96 AACGGIltlEDGIPlraAGFCNINELFEAHSEMAQRIEVLKGPGSALYGSNAVHGVINVITPDTTQggglvglDYGSYGY 175
Cdd:PRK13486 103 VRQGGS---SDVTP---NGFSAMNTGFMPPLAAIERIEVIRGPMSTLYGSDAMGGVVNIITRKNAD-------KWLSSVN 169
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1248244047 176 ARYKLRAGQDYGNSGI------------GINASVTDDTGYRDDESV---------------KQQKINIRHRFE----HSN 224
Cdd:PRK13486 170 AGLNLQESNKWGNSSQfnfwssgplvddSVSLQVRGSTQQRQGSSVtslsdtaatripyptESQNYNLGARLDwkasEQD 249
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1248244047 225 LLL----TSGLTYTNLDQHTAGFITGFES---YKNEDIAQqnfdpdAFRKARSFRAW-SNAQW-QLKN-GNVLSITPYVR 294
Cdd:PRK13486 250 VLWfdmdTTRQRYDNRDGQLGSLTGGYDRtlrYERNKISA------GYDHTFTFGTWkSYLNWnETENkGRELVRSVLKR 323
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1248244047 295 DQSmdffkhFLPGTPLETNsQTGIGVQSLYQHNLQSNVKVNLGldGEYTRSDFTQSQNEPTQGSAFLVATvpqgkhydyd 374
Cdd:PRK13486 324 DKW------GLAGQPRELK-ESNLILNSLLLTPLGESHLVTVG--GEFQSSSMKDGVVLASTGETFRQKS---------- 384
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1248244047 375 vnatlYAPFASVEWQLNKWF-ISAGLRYEHMQYdytnnmltgrttedgtecgFGGcrysrpasgknsfsNTSPKFGVSYK 453
Cdd:PRK13486 385 -----WSVFAEDEWHLTDALaLTAGSRYEHHEQ-------------------FGG--------------HFSPRAYLVWD 426
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1248244047 454 ANKNNTLYANFSRGYRAPQAAELYQ----LQREQTT-----ADLNPEIANNAELGL------------KGYYSNVSYALA 512
Cdd:PRK13486 427 VADAWTLKGGVTTGYKAPRMGQLHKgisgVSGQGKTnllgnPDLKPEESVSYEAGVyydnpaglnanvTGFMTDFSNKIV 506
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1248244047 513 VYAMSKHNTIYrdsdffnVNDGSSRHRGIELEVDYAL---SKTLNLQFAGTHAKHTYTNNQlinglninGNNVDTAPRNV 589
Cdd:PRK13486 507 SYSINDNTNSY-------VNSGKARLHGVEFAGTLPLwseDVTLSLNYTWTRSEQRDGDNK--------GAPLSYTPEHM 571
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1248244047 590 ANLDLTWQAFNNLALAL-------------QWHSVSS-----YYTDPENLHSYEghdILSLRAKWQVTNNLEVLARIINL 651
Cdd:PRK13486 572 VNAKLNWQITEEVASWLgaryrgktprftqNYSSLSAvqkkvYDEKGEYLKAWT---VVDAGLSWKMTDALTLNAAVNNL 648
|
730
....*....|....*....
gi 1248244047 652 TDEAYAERADYTSFTGDRY 670
Cdd:PRK13486 649 LNKDYSDVSLYSAGKSTLY 667
|
|
| Plug |
pfam07715 |
TonB-dependent Receptor Plug Domain; The Plug domain has been shown to be an independently ... |
44-151 |
1.76e-13 |
|
TonB-dependent Receptor Plug Domain; The Plug domain has been shown to be an independently folding subunit of the TonB-dependent receptors. It acts as the channel gate, blocking the pore until the channel is bound by ligand. At this point it under goes conformational changes opens the channel.
Pssm-ID: 462243 [Multi-domain] Cd Length: 107 Bit Score: 66.91 E-value: 1.76e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1248244047 44 PLTISTLSEAQLNSIAPTHVEESLQRIAGANVQRGNGQEYlpalRSPVLSGAAAcGGILTLEDGIPLRAAGFcNINELFE 123
Cdd:pfam07715 6 PGSVSVVTAEDIEDQGATNLADALRGVPGVSVSSGGGGGG----SSISIRGFGS-NRVLVLVDGVPLNSGGG-GSVDLNS 79
|
90 100
....*....|....*....|....*...
gi 1248244047 124 AHSEMAQRIEVLKGPGSALYGSNAVHGV 151
Cdd:pfam07715 80 IDPEDIERVEVLKGPASALYGSGAIGGV 107
|
|
| btuB |
PRK10641 |
TonB-dependent vitamin B12 receptor BtuB; |
22-656 |
9.52e-12 |
|
TonB-dependent vitamin B12 receptor BtuB;
Pssm-ID: 236730 [Multi-domain] Cd Length: 614 Bit Score: 68.10 E-value: 9.52e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1248244047 22 NDDAIETITTTASRTE-----ALAtpyPLTISTLSEA---QLNSIApthveESLQRIAGANVQR--GNGQeylpaLRSPV 91
Cdd:PRK10641 21 QDTSPDTLVVTANRFQqpvstVLA---PTTVVTRDDIdrwQSKSVN-----DVLRRLPGVDIAQngGLGQ-----LSSLF 87
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1248244047 92 LSGAAAcGGILTLEDGIPLRAAGFCNINELFEAHSEMAQRIEVLKGPGSALYGSNAVHGVINVITPDTTQGGGLvgldyg 171
Cdd:PRK10641 88 IRGTNS-SHVLVLIDGVRLNQAGISGSADLSQIPISLVQRIEYIRGPRSAVYGSDAIGGVVNIITTRDKPGTTL------ 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1248244047 172 sygyaryklragqdygNSGIGINasvtddtGYRDDESVKQQKINirhrfEHSNLLLTSGLTYTNldqhtagfitGFESYK 251
Cdd:PRK10641 161 ----------------SAGWGSN-------GYQNYDGSTQQQLG-----DNTRVTLAGDYTYTK----------GFDVVA 202
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1248244047 252 NEDIAQQNF-DPDAFRkARSFraWSNAQWQLKNgnvlSITPYVR----DQSMDFFKHFLPGTPLETNSQtgigvqsLYQH 326
Cdd:PRK10641 203 YGNTGTQAQpDRDGFM-SKTL--WGGLEHQFND----QWSGFVRgygyDNRTDYDAYYSPGSPLIDTRQ-------LYSQ 268
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1248244047 327 NLQSNVKVNlgldgeytrSDFTQSQneptqgsafLVATVPQGKHYDYDVNATLYAPFAS--------VEW----QLNKWF 394
Cdd:PRK10641 269 SWDAGLRYN---------GGIYSSQ---------LIASYSHSKDYNYDPHYGRYDSSATlddmkqynVQWgntvQVGHGN 330
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1248244047 395 ISAGLRYEHMQYDYTNNMLTGRTTEDGTECGFGGCRYSRP----ASGKnsfSNTSPKFG--------VSYKANKNNTLYA 462
Cdd:PRK10641 331 ISAGVDWQKQTTTPGTGYVPDGYDQRNTGIYLTGQQQIGDvtleGAAR---SDDNSQFGwhgtwqtsAGWEFIDGYRFIA 407
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1248244047 463 NFSRGYRAPQAAELYQLqreQTTADLNPEIANNAELGLKGYYSNVSYALAVYAMSKHNTI-YRDSDFFNVNDGSSRHRGI 541
Cdd:PRK10641 408 SYGTAFKAPNLGQLYGF---YGNPNLKPEESKQWEGGFEGLTGPVNWRLSGYRNDIDNLIdYDDHTLKYYNVGKATIKGV 484
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1248244047 542 EL--EVDY-ALSKTLNLQFagTHAKHTYTNNQlinglningnnVDTAPRNVANLDLTWQAFnNLALALQWHSVSSYYTDP 618
Cdd:PRK10641 485 EWtgNFDTgPLTHQVTLDY--VDPRNAITDEP-----------LARRAKQQVKYQLDWQLY-DFDWGVTYQYLGTRYDKD 550
|
650 660 670 680
....*....|....*....|....*....|....*....|...
gi 1248244047 619 ENLHSYE-----GHDILSLRAKWQVTNNLEVLARIINLTDEAY 656
Cdd:PRK10641 551 YSTYPYQtvklgGVSLWDLAVSYPVTSHLTVRGKIANLFDKDY 593
|
|
| PRK13484 |
PRK13484 |
IreA family TonB-dependent siderophore receptor; |
22-654 |
4.94e-11 |
|
IreA family TonB-dependent siderophore receptor;
Pssm-ID: 139605 [Multi-domain] Cd Length: 682 Bit Score: 65.80 E-value: 4.94e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1248244047 22 NDDAIETITTTASRTEALATPYPLTISTLSEAQLNSIAPTHVEESLQRIAGANVQRGNGQEYLpALRSpvLSGAAAcggi 101
Cdd:PRK13484 26 SDKKEDTLVVTASGFTQQLRNAPASVSVITSEQLQKKPVSDLVDAVKDVEGISITGGNEKPDI-SIRG--LSGDYT---- 98
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1248244047 102 LTLEDGI-----PLRAAGFCNINELFEAHSEMAQRIEVLKGPGSALYGSNAVHGVINVIT-PDTTQG-GGLVGL------ 168
Cdd:PRK13484 99 LILVDGRrqsgrESRPNGSGGFEAGFIPPVEAIERIEVIRGPMSSLYGSDAIGGVINIITkPVNNQTwDGVLGLggiiqe 178
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1248244047 169 --DYGSYGYARYKLRAG--------QDYGNSGIGINASVTDDTGYRDDESVkqqkinirhrfehsnlllTSGLTYTNLDQ 238
Cdd:PRK13484 179 hgKFGNSTTNDFYLSGPlikdklglQLYGGMNYRKEDSISQGTPAKDNKNI------------------TATLQFTPTES 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1248244047 239 HTagFItgFESYKNEdiAQQNFDPdafrkARSFRAWSNaqwqlkNGNVLSitPYVRDQSMDFFKHFLpgtpLETNSQTGI 318
Cdd:PRK13484 241 QK--FV--FEYGKNN--QVHTLTP-----GESLDAWTM------RGNLKQ--PNSKRETHNSRSHWV----AAWNAQGEI 297
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1248244047 319 --GVQSLYQHNLQSNVKVNlGLDgEYTRSDFTQSQNEP----TQGSAFLVATVPQ-----GKHYDYdvnATLYAPFASVE 387
Cdd:PRK13484 298 lhPEIAVYQEKVIREVKSG-KKD-KYNHWDLNYESRKPeitnTIIDAKVTAFLPEnvltiGGQFQH---AELRDDSATGK 372
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1248244047 388 WQLNKWFISAGLRYEHMQYDY--TNNM-LTGRTTEDGTECgFGgcrysrpasgknsfSNTSPKFGVSYKANKNNTLYANF 464
Cdd:PRK13484 373 KTTETQSVSIKQKAVFIENEYaaTDSLaLTGGLRLDNHEI-YG--------------SYWNPRLYAVYNLTDNLTLKGGI 437
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1248244047 465 SRGYRAPQAAEL---YQLQREQTTA------DLNPEIANNAELGL-----KGYYSNVSY-------ALAVYAMSKHNTIY 523
Cdd:PRK13484 438 AKAFRAPSIREVspgFGTLTQGGASimygnrDLKPETSVTEEIGIiysndSGFSASATLfntdfknKLTSYDIGTKDPVT 517
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1248244047 524 RDSDFFNVNDGSSRHRGIELEVDYALSKTLNLQfagthAKHTYTN------NQLINGLNINGNNVDTAPRNVANLDLTWQ 597
Cdd:PRK13484 518 GLNTFIYDNVGEANIRGVELATQIPVYDKWHVS-----ANYTFTDsrrksdDESLNGKSLKGEPLERTPRHAANAKLEWD 592
|
650 660 670 680 690 700
....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1248244047 598 A------FNNLALALQ--WHSVSSYYTDPENLHSYEGHDI-LSLRAKWQVTNNLEVLariiNLTDE 654
Cdd:PRK13484 593 YtqditfYSSLNYTGKqiWAAQRNGAKVPRVRNGFTSMDIgLNYQILPDTLINFAVL----NVTDR 654
|
|
| OMP_b-brl_3 |
pfam14905 |
Outer membrane protein beta-barrel family; This family includes proteins annotated as TonB ... |
324-684 |
7.01e-10 |
|
Outer membrane protein beta-barrel family; This family includes proteins annotated as TonB dependent receptors. But it is also likely to contain other membrane beta barrel proteins of other functions.
Pssm-ID: 434300 [Multi-domain] Cd Length: 407 Bit Score: 61.52 E-value: 7.01e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1248244047 324 YQHNLQSNVKVNLGLDGEYTRSDFTQSQNEPTQGSAFLVATvpQGKHYDYDVNatLYAPFASVEWQLNKWFISAGLRYEH 403
Cdd:pfam14905 63 YTKPLGKKGKLEAGAKYSFRNNDNDYDYENLDNGEWVPDPS--RSNDFDYKEN--IYAAYASYSKKFGKWSYQAGLRAEY 138
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1248244047 404 MQYDYTNNmltgrttedgtecgfggcrySRPASGKNSFSNTSPKFGVSYKANKNNTLYANFS---RGYRaPQaaeLYQLQ 480
Cdd:pfam14905 139 TDIDGDSV--------------------TTNETFKRNYFNLFPSASLSYKLNDNNSLQLSLYyrrIINR-PS---YWDLN 194
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1248244047 481 --REQTTA--------DLNPEIANNAELGL---KGYYSNVSYALAVYAMSKHNTIYRDSDFFN---VNDGSSRHRGIELE 544
Cdd:pfam14905 195 pfRNYSDPynysqgnpNLKPEYTNSFELGYtykWKLSLSLSYRYTNDVIQQTFITDDNDNVTYttyENLGKSNSYGLELS 274
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1248244047 545 VDYALSKTLNLQFAGTHAKHTYTNNQLINGlningnnvdtaprNVANLDLTWQAFNNLALALQWH-SVSSYYTDPENLHS 623
Cdd:pfam14905 275 ASFNPTKWWSLNGNLNGYYNKYKIDGSLNS-------------DFSNFGFNWNLNNTFTLPKGWSlQLNGNYRSPRVTGQ 341
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1248244047 624 YEGHDILSLRA---------KWQVTnnlevlariINLTDEAYAERADYTSFTGDRY-----FPGKPRNAMLSATY 684
Cdd:pfam14905 342 GKIKPFYSLDLglsksflkkKLTLS---------LNVNDIFNTRKFRSTTNYDNGFiqsynNKWDSRSVRLSLSY 407
|
|
| TonB-Xanth-Caul |
TIGR01782 |
TonB-dependent receptor; This model represents a family of TonB-dependent outer-membrane ... |
359-685 |
7.57e-09 |
|
TonB-dependent receptor; This model represents a family of TonB-dependent outer-membrane receptors which are found mainly in Xanthomonas and Caulobacter. These appear to represent the expansion of a paralogous family in that the 22 X. axonopodis (21 in X. campestris) and 18 C. crescentus sequences are more closely related to each other than any of the many TonB-dependent receptors found in other species. In fact, the Crescentus and Xanthomonas sequences are inseparable on a phylogenetic tree using a PAM-weighted neighbor-joining method, indicating that one of the two genuses may have acquired this set of receptors from the other. The mechanism by which this family is shared between Xanthomonas, a gamma proteobacterial plant pathogen and Caulobacter, an alpha proteobacterial aquatic organism is unclear. [Transport and binding proteins, Porins]
Pssm-ID: 273804 [Multi-domain] Cd Length: 845 Bit Score: 58.89 E-value: 7.57e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1248244047 359 AFLVATVPQGKHYDYDVNATLYAPFASVEWQL-NKWFISAGLRYEHmqydyTNNMLTGRTTEDGTecgfGGCRYS-RPAS 436
Cdd:TIGR01782 487 GGGTYTYASTAPNTYTVTEDTTAAYAMANFDTgLRLRGNVGVRYER-----TDQTSDGWQSQPAA----NGTGSVlVPVS 557
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1248244047 437 GKNSFSNTSPKFGVSYKANKNNTL------------YANFSRGYRAPQAAELYQLQREQTTADLNPEIANNAELGLKGYY 504
Cdd:TIGR01782 558 ADRDYTDVLPSLNLAYDLTDDLVLrfaasktitrpdFGDLAANTSLSDDGTGGTVTVSGGNPDLKPYESDNLDLSLEWYF 637
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1248244047 505 SNVSYA-LAVYAMSKHNTIYRDS--DFFN---------------VNDGSSRH-RGIELEVDYALSKTLNLQFA-GTHAKH 564
Cdd:TIGR01782 638 GPGGLLsAAVFYKDIKNFIVTTTstETNDgggglvvagvlvsrpVNGGKAGKiRGVELGYQQTFDFLPGPLSGfGVQANY 717
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1248244047 565 TYTNNQLINGLNINGNNVDT---APRNVANLDLTWQAFNNLA-LALQWHS----VSSYYTDPENLHSYEGHDILSLRAKW 636
Cdd:TIGR01782 718 TYVDSEADPSVDGVQRRKLPlpgLSKNTANATLYYEKGGFSArLSYNYRSdyllDVGGSNINRLDRYVDPRGQLDLSASY 797
|
330 340 350 360
....*....|....*....|....*....|....*....|....*....
gi 1248244047 637 QVTNNLEVLARIINLTDEAYAERADYTSFTGDRYFPGkpRNAMLSATYT 685
Cdd:TIGR01782 798 QVSDHLSLGLQASNLTNEPSRWYTGGKQRPREYVETG--RTYMLGLRYK 844
|
|
| PRK10064 |
PRK10064 |
catecholate siderophore receptor CirA; Provisional |
23-671 |
8.07e-09 |
|
catecholate siderophore receptor CirA; Provisional
Pssm-ID: 236646 [Multi-domain] Cd Length: 663 Bit Score: 58.74 E-value: 8.07e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1248244047 23 DDAIETITTTASRTEALATPYPLTISTLSEAQLNSIAPTHVEESLQRIAGanVQRGNGQEYLPALRSPVLSGAAacggIL 102
Cdd:PRK10064 27 DDDGETMVVTASAVEQNLKDAPASISVITQEDLQRKPVQNLKDVLKEVPG--VQLTNEGDNRKGVSIRGLDSSY----TL 100
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1248244047 103 TLEDG--IPLRAAGF-CNINELFEAHSEMAQRIEVLKGPGSALYGSNAVHGVINVIT-PDTTQGGGLVGLDYGSYGY-AR 177
Cdd:PRK10064 101 ILIDGkrVNSRNAVFrHNDFDLNWIPVDAIERIEVVRGPMSSLYGSDALGGVVNIITkKIGQKWHGTVTVDTTIQEHrDR 180
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1248244047 178 YKLRAGQDYgNSG------IGINASVTDDTGYRDDesvkQQKINIRHRFEHSNLL-LTSG-----LTYTNLDQHTAGFIT 245
Cdd:PRK10064 181 GDTYNGQFF-TSGplidgvLGMKAYGSLAKREKDD----PQNSTTTDTGETPRIEgFTSRdgnveFAWTPNQNHDFTAGY 255
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1248244047 246 GFESyknediaqQNFDPDAFRKARSFR----AWSNAQWQLKNGNVLSITPYVRDQsmdffkhflpgTPLETNSQTGigvq 321
Cdd:PRK10064 256 GFDR--------QDRDSDSLDKNRLERqnysLSHNGRWDYGNSELKYYGEKVENK-----------NPGNSSPITS---- 312
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1248244047 322 slyqHNLQSNVKVNLGLD--------GEYTRSDFTQSQNEPTQGSAflvatvpqgkhydYDVNATLYAPFASVEWQL-NK 392
Cdd:PRK10064 313 ----ESNSIDGKYTLPLTainqfltfGGEWRHDKLSDAVNLTGGTS-------------SKTSASQYALFVEDEWRIfEP 375
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1248244047 393 WFISAGLRYEHMQydytnnmltgrttedgtecGFGgcrysrpasgknsfSNTSPKFGVSYKANKNNTLYANFSRGYRAPQ 472
Cdd:PRK10064 376 LALTTGVRMDDHE-------------------TYG--------------DHWSPRAYLVYNATDTVTVKGGWATAFKAPS 422
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1248244047 473 aaeLYQLQREQTTA------------DLNPEIANNAELGL-----KGYYSNVSYALAVYAMSKHN--TIYRDSD------ 527
Cdd:PRK10064 423 ---LLQLSPDWTSNscrgackivgspDLKPETSESWELGLyymgeEGWLEGVESSVTVFRNDVDDriSISRTSDvnaapg 499
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1248244047 528 --------------------FFNVNdgSSRHRGIELEVDYALSKTLNLQFagthakhTYTNNQLINGLNINGNNVDTAPR 587
Cdd:PRK10064 500 yqnfvgfetngrgrrvpvfrYYNVN--KARIQGVETELKIPFNDEWKLSL-------NYTYNDGRDVSNGENKPLSDLPF 570
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1248244047 588 NVANLDLTWQ--AFNNLALALQWHSVSSYYTDPENLHSYEGHDILSLRAKWQVTNNLEVLARIINLTDEAyAERADYtSF 665
Cdd:PRK10064 571 HTANGTLDWKplALEDWSFYVSGNYTGQKRADSATAKTPGGYTIWNTGAAWQVTKDVKLRAGVLNLGDKD-LSRDDY-SY 648
|
....*...
gi 1248244047 666 T--GDRYF 671
Cdd:PRK10064 649 NedGRRYF 656
|
|
| PRK13513 |
PRK13513 |
ligand-gated channel protein; |
130-670 |
1.30e-08 |
|
ligand-gated channel protein;
Pssm-ID: 184104 [Multi-domain] Cd Length: 659 Bit Score: 58.24 E-value: 1.30e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1248244047 130 QRIEVLKGPGSALYGSNAVHGVINVITPDTTQGGGlvgldyGSygyarykLRAG---QDYGNSGIGINASVtddtgYRDD 206
Cdd:PRK13513 138 ERIEVVRGPMSSLYGSDAMGGVINIITRKVQKEWH------GS-------LRADatlQEDSKSGDIFQTNA-----YASG 199
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1248244047 207 ESVKqqkinirhrfehsNLLltsGLTytnldqhtagfITGFESYKNEDIAqqnfdPDAFRKARsfrawsnaqwqLKNGN- 285
Cdd:PRK13513 200 PLID-------------GLL---GLK-----------VSGLLSHRSEDKI-----IDGYNEQR-----------MRNGTa 236
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1248244047 286 VLSITPyvrDQSMDF---FKHFLP---GTPLETNSQTGIGVQSLYQHN---LQSNVKVNLGLDGEYTRSDFT-------Q 349
Cdd:PRK13513 237 TFSLTP---DDNNEFdfeIGRYVQdrnSTPGRTLALNGTNSDTQYDRNnyaITHNGYYDFGNSTSYIQRDETrnpsrqmK 313
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1248244047 350 SQNE--PTQGSAFLVA-TVPQGKHYDYDvnaTLY-----APFASVEWQLNKWfiSAGLRYEHmQYDYTNNM-LTgrtted 420
Cdd:PRK13513 314 SVDTifNTQTSFLLDDhTLSLGGQYRYE---ELYdkgnqLPSASDLNKLTRW--SWALFAED-EWQMTNDFaLT------ 381
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1248244047 421 gtecgfGGCRYSRpasGKNSFSNTSPK-FGVsYKANKNNTLYANFSRGYRAP---QAAELYQlqreQTT----------- 485
Cdd:PRK13513 382 ------GGIRMDQ---DQNYGTHWTPRlYGV-WHLADQWTLKGGVSTGYRSPdlrQATDNWG----QLTgggglpalilg 447
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1248244047 486 -ADLNPEIANNAELGLkgYYSN---VSYALAVYamskhNTIYRDS-----------------------DFFN--VNDGSS 536
Cdd:PRK13513 448 nSDLKPEKSISQEIGI--LWDNqenLNASVTLF-----NTDFKDKitevrncdttntdgqcvfnginyDFISdrINVDKA 520
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1248244047 537 RHRGIELEVDYALSKTLNLQfagthAKHTYTNNQlINGLNINGNNVDTAPRNVANLDLTWQAFNNLAL--ALQWHSVSSY 614
Cdd:PRK13513 521 NMRGVEATFNWDINQAWSLA-----TNYTFTQSE-QKSGAFAGQPLNQMPKHMANATLNWQTTEDFATwiRINYRGKTSE 594
|
570 580 590 600 610 620
....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1248244047 615 YTD----PENLHSYEGHDilsLRAKWQVTNNLEVLARIINLTDeayaERADYTSF----TGDRY 670
Cdd:PRK13513 595 YLNrtsmGSGTPSYTFVD---LGASYQLTKELRLMGGVYNLLD----KRVDIDVNdkvlDGRRY 651
|
|
| PRK09840 |
PRK09840 |
catecholate siderophore receptor Fiu; Provisional |
389-682 |
1.34e-06 |
|
catecholate siderophore receptor Fiu; Provisional
Pssm-ID: 182105 [Multi-domain] Cd Length: 761 Bit Score: 51.73 E-value: 1.34e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1248244047 389 QLN-KWFISAGLRYEHMQYDYtNNMLTGRTTEDGTECGFGGCRYSRP---ASGKNSFSNTSPKFGVSYKANKNNTLYANF 464
Cdd:PRK09840 456 QLTrDWELNGGIRLDNYHTEY-DSATACGGSGRGAITCPAGVAKGSPvttVDTAKSGNLVNWKAGALYKLTENGNVYINY 534
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1248244047 465 SRGYRAPQAAElYQLQREQTTADLN-----PEIANNAELGLKGYYSNVSYAL--AVYAMSKHNTIYRDSDFFNVNDGSSR 537
Cdd:PRK09840 535 AVSQQPPGGSN-FALAQSGSGNSANrtdfkPQKANTSEIGTKWQVLDKRLLLtaALFRTDIENEVEQNDDGTYSQYGKKR 613
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1248244047 538 HRGIELEVDYALSKTLNLQFAGTHAKHTYTNNQLINGLNINGnnVDTAPRNVANLDLTWQAFNNLALALQWHSVSSYYTD 617
Cdd:PRK09840 614 VEGYELSVAGNITPAWQVIAGYTQQKATVKNGKDVAQDGSSS--LPYTPEHAFTLWSQYQATDDLSVGGGARYIGSMHRG 691
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1248244047 618 -------PENLHSYEghdILSLRAKWQVTNNLEVLARIINLTDEAYAERADYTsftGDRYFPGKPRNAMLSA 682
Cdd:PRK09840 692 sdgavgtPAFTEGYW---VADAKLGYRVNRNLDLQLNVYNLFDTDYVASINKS---GYRYHPGEPRTFLLTA 757
|
|
| PRK10044 |
PRK10044 |
ferrichrome outer membrane transporter; Provisional |
387-620 |
2.05e-06 |
|
ferrichrome outer membrane transporter; Provisional
Pssm-ID: 236643 [Multi-domain] Cd Length: 727 Bit Score: 50.91 E-value: 2.05e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1248244047 387 EWqlNKWFISAGLRYEHMQYDyTNNMLTGRTTE--DGTECGFGGCRYSrpasgknsFSN-TSPKFgvSYKANKNNTLYAN 463
Cdd:PRK10044 454 EW--DKWLVTLGGRYDWADQS-SLNRVNGTTDKrdDKQFTWRGGVNYL--------FDNgITPYF--SYSESFEPSSGTG 520
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1248244047 464 FSRGYRAPQAAELYqlqreqttadlnpeiannaELGLKgYYSN---VSYALAVYAMSKHNTIYRDSD--FFNVNDGSSRH 538
Cdd:PRK10044 521 KDGNIFAPSKGKQY-------------------EAGVK-YVPKdrpIVVTGAVYQLTKTNNLTADPEnsFFSVQGGEIRA 580
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1248244047 539 RGIELEVDYALSKTLNLQfagthAKHTYTNNQLINGLNINGNNVDTAPRNVANL--DLTWQ--AFNNLALALQWHSVSSY 614
Cdd:PRK10044 581 RGVELEAKAALSANVNVT-----GSYTYTDAEYTTDTTYKGNTPAQVPKHMASLwaDYTFFdgPLSGLTLGTGGRYTGSS 655
|
....*.
gi 1248244047 615 YTDPEN 620
Cdd:PRK10044 656 YGDPAN 661
|
|
| PRK13524 |
PRK13524 |
FepA family TonB-dependent siderophore receptor; |
127-161 |
6.22e-06 |
|
FepA family TonB-dependent siderophore receptor;
Pssm-ID: 237410 [Multi-domain] Cd Length: 744 Bit Score: 49.64 E-value: 6.22e-06
10 20 30
....*....|....*....|....*....|....*
gi 1248244047 127 EMAQRIEVLKGPGSALYGSNAVHGVINVITPDTTQ 161
Cdd:PRK13524 144 EMIERIEVLRGPAAARYGNGAAGGVVNIITKKPTG 178
|
|
| PRK13528 |
PRK13528 |
outer membrane receptor FepA; Provisional |
127-156 |
9.14e-06 |
|
outer membrane receptor FepA; Provisional
Pssm-ID: 237413 [Multi-domain] Cd Length: 727 Bit Score: 48.98 E-value: 9.14e-06
10 20 30
....*....|....*....|....*....|
gi 1248244047 127 EMAQRIEVLKGPGSALYGSNAVHGVINVIT 156
Cdd:PRK13528 142 EMVERIEVIRGPAAARYGSGAAGGVVNIIT 171
|
|
| PRK14050 |
PRK14050 |
TonB-dependent siderophore receptor; |
26-155 |
9.33e-06 |
|
TonB-dependent siderophore receptor;
Pssm-ID: 237595 [Multi-domain] Cd Length: 728 Bit Score: 49.03 E-value: 9.33e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1248244047 26 IETITTTASRTEALATPYPLTISTLSEAQLNSIAPTH-VEESLQRIAGANVQR-GNGQE----YLPALRspvlsgAAACG 99
Cdd:PRK14050 62 VAKATATGSKTDTPITEIPQSVSVVGRQEMDDRGVTNkVDEALRYTPGVLSQPfGTDGDtdwfYIRGFD------ATQTG 135
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|....*.
gi 1248244047 100 GILtleDGIPLRAAGFCNinelFEAHSEMAQRIEVLKGPGSALYGSNAVHGVINVI 155
Cdd:PRK14050 136 VFL---DGLNLFSYGFGG----FQIDPFMLERVEVLKGPASVLYGGSNPGGIVNMV 184
|
|
| PRK10003 |
PRK10003 |
ferric-rhodotorulic acid outer membrane transporter; Provisional |
428-684 |
4.13e-05 |
|
ferric-rhodotorulic acid outer membrane transporter; Provisional
Pssm-ID: 236640 [Multi-domain] Cd Length: 729 Bit Score: 46.78 E-value: 4.13e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1248244047 428 GCRYS----RPASGKNSFSNTSPKFGVSYKANKNNTLYANFSRGYRaPQAaelyqlQREQTTADLNPEIANNAELGLKG- 502
Cdd:PRK10003 472 GARYTnwrvDTLTYSMEKNHTTPYAGLVYDINDNWSTYASYTSIFQ-PQN------DRDSSGKYLAPITGNNYELGLKSd 544
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1248244047 503 -YYSNVSYALAVYAMSKHN---------------TIYRDSDffnvndgSSRHRGIELEVDYALSKTLNLQFAGThaKHTY 566
Cdd:PRK10003 545 wMNSRLTTTLAIFRIEQDNvaqstgtpipgsngeTAYKAVD-------GTVSKGVEFELNGAITDNWQLTFGAT--RYIA 615
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1248244047 567 TNNQLINGLNINgnnvdtaPRNVANLDLTWQAFNNLALAL----QWHsvSSYYTD---PENLHSYE--GHDILSLRAKWQ 637
Cdd:PRK10003 616 EDNEGNAVNPNL-------PRTTVKLFTRYRLPVMPELTVgggvNWQ--NRVYTDtvtPYGTFRAEqgSYALVDLFTRYQ 686
|
250 260 270 280
....*....|....*....|....*....|....*....|....*..
gi 1248244047 638 VTNNLEVLARIINLTDEAYaeradYTSFTGDRYFpGKPRNAMLSATY 684
Cdd:PRK10003 687 VTKNFSVQGNVNNLFDKTY-----DTNVEGSIVY-GAPRNFSITATY 727
|
|
| PRK14049 |
PRK14049 |
ferrioxamine B receptor precursor protein; Provisional |
32-161 |
8.92e-03 |
|
ferrioxamine B receptor precursor protein; Provisional
Pssm-ID: 172541 [Multi-domain] Cd Length: 726 Bit Score: 39.50 E-value: 8.92e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1248244047 32 TASRTEA-LATPY---PLTISTLSEAQLNSIAPTHVEESLQRIAGANVqrgNGQEYLPALRSPVLSG-AAACGGILtlED 106
Cdd:PRK14049 64 TSSATGAkVDTPFletPQSISSVTEQQLKDRNPQTLLETLAYTPGARV---GAFGFDPRFDAFFVRGfDVTYTGVF--RD 138
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|....*
gi 1248244047 107 GIPLRAAgfcnINELFEAHSEMAQRIEVLKGPGSALYGSNAVHGVINVITPDTTQ 161
Cdd:PRK14049 139 NLRQPGA----SSSIFKTEPYGLEGVSILRGPSSALYGASGAGGLFNLITKRPTE 189
|
|
| |
