NCBI Home Page NCBI Site Search page NCBI Guide that lists and describes the NCBI resources
Conserved domains on  [gi|1267287696|ref|WP_098137948|]
View 

NAD(P)/FAD-dependent oxidoreductase [Bacillus toyonensis]

Protein Classification

FAD-dependent oxidoreductase( domain architecture ID 11428987)

FAD-dependent oxidoreductase catalyzes the transfer of electrons from one molecule, the electron donor or reductant, to another molecule, the electron acceptor or oxidant

CATH:  3.50.50.60
EC:  1.-.-.-
Gene Ontology:  GO:0071949|GO:0016491

Graphical summary

 Zoom to residue level

show extra options »

Show site features     Horizontal zoom: ×

List of domain hits

 Name Accession Description Interval E-value
UbiH COG0654
2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases [Coenzyme ...
 5-389 1.46e-55

2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases [Coenzyme transport and metabolism, Energy production and conversion]; 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases is part of the Pathway/BioSystem: Ubiquinone biosynthesis


:

Pssm-ID: 440419 [Multi-domain]  Cd Length: 326  Bit Score: 185.91  E-value: 1.46e-55
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1267287696   5 KKYDAIVVGAGPVGLVAGLSLQKKGISTLVIEGDSfgRPRPGSRAIYLHSASLKLLEETaeGLGFTLAHNGIIWPVKRTF 84
Cdd:COG0654     2 MRTDVLIVGGGPAGLALALALARAGIRVTVVERAP--PPRPDGRGIALSPRSLELLRRL--GLWDRLLARGAPIRGIRVR 77

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1267287696  85 YK--GKEVYVRDYGKDenlksnRLPHFTALHQDEIEKHMYEACIKAGVEFLWDAPVKKLHITDSEVEVTITNDEILKAQY 162
Cdd:COG0654    78 DGsdGRVLARFDAAET------GLPAGLVVPRADLERALLEAARALGVELRFGTEVTGLEQDADGVTVTLADGRTLRADL 151

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1267287696 163 VIGCDGARSIVREQAGLTFEGPRTADTFIVVDakeddtnplplerifhyqhpamegrnvmfvpfkggwrVDLQLLesdnp 242
Cdd:COG0654   152 VVGADGARSAVRRLLGIGFTGRDYPQRALWAG-------------------------------------VRTELR----- 189

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1267287696 243 ddytniESVKKWLPKVMDakyAERITWVSSYRFHQVVANSFTdaKRRILLAGEAAHLFAPFGARGLNSGIPDAVLAARGI 322
Cdd:COG0654   190 ------ARLAAAGPRLGE---LLELSPRSAFPLRRRRAERWR--RGRVVLLGDAAHTMHPLGGQGANLALRDAAALAWKL 258

                         330       340       350       360       370       380
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1267287696 323 EKALQSNSEEERINAIEAaanERRIAAKWNRDASTTALHHLQGNSPEMNMKRDIAASMVSIVPRLGR 389
Cdd:COG0654   259 AAALRGRDDEAALARYER---ERRPRAARVQRAADALGRLFHPDSPPLRLLRNAGLRLLDRLPPLKG 322
 
Name Accession Description Interval E-value
UbiH COG0654
2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases [Coenzyme ...
 5-389 1.46e-55

2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases [Coenzyme transport and metabolism, Energy production and conversion]; 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases is part of the Pathway/BioSystem: Ubiquinone biosynthesis


Pssm-ID: 440419 [Multi-domain]  Cd Length: 326  Bit Score: 185.91  E-value: 1.46e-55
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1267287696   5 KKYDAIVVGAGPVGLVAGLSLQKKGISTLVIEGDSfgRPRPGSRAIYLHSASLKLLEETaeGLGFTLAHNGIIWPVKRTF 84
Cdd:COG0654     2 MRTDVLIVGGGPAGLALALALARAGIRVTVVERAP--PPRPDGRGIALSPRSLELLRRL--GLWDRLLARGAPIRGIRVR 77

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1267287696  85 YK--GKEVYVRDYGKDenlksnRLPHFTALHQDEIEKHMYEACIKAGVEFLWDAPVKKLHITDSEVEVTITNDEILKAQY 162
Cdd:COG0654    78 DGsdGRVLARFDAAET------GLPAGLVVPRADLERALLEAARALGVELRFGTEVTGLEQDADGVTVTLADGRTLRADL 151

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1267287696 163 VIGCDGARSIVREQAGLTFEGPRTADTFIVVDakeddtnplplerifhyqhpamegrnvmfvpfkggwrVDLQLLesdnp 242
Cdd:COG0654   152 VVGADGARSAVRRLLGIGFTGRDYPQRALWAG-------------------------------------VRTELR----- 189

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1267287696 243 ddytniESVKKWLPKVMDakyAERITWVSSYRFHQVVANSFTdaKRRILLAGEAAHLFAPFGARGLNSGIPDAVLAARGI 322
Cdd:COG0654   190 ------ARLAAAGPRLGE---LLELSPRSAFPLRRRRAERWR--RGRVVLLGDAAHTMHPLGGQGANLALRDAAALAWKL 258

                         330       340       350       360       370       380
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1267287696 323 EKALQSNSEEERINAIEAaanERRIAAKWNRDASTTALHHLQGNSPEMNMKRDIAASMVSIVPRLGR 389
Cdd:COG0654   259 AAALRGRDDEAALARYER---ERRPRAARVQRAADALGRLFHPDSPPLRLLRNAGLRLLDRLPPLKG 322
PRK08132 PRK08132
FAD-dependent oxidoreductase; Provisional
 10-344 4.12e-48

FAD-dependent oxidoreductase; Provisional


Pssm-ID: 236158 [Multi-domain]  Cd Length: 547  Bit Score: 171.97  E-value: 4.12e-48
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1267287696  10 IVVGAGPVGLVAGLSLQKKGISTLVIEGDsfGRPRPGSRAIYLHSASLKLLEETaeGLGFTLAHNGIIWPVKRTFYKGKE 89
Cdd:PRK08132   27 VVVGAGPVGLALAIDLAQQGVPVVLLDDD--DTLSTGSRAICFAKRSLEIFDRL--GCGERMVDKGVSWNVGKVFLRDEE 102

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1267287696  90 VYVRDYGKDENlksNRLPHFTALHQDEIEKHMYEACIK-AGVEFLWDAPVKKLHITDSEVEVTI-TNDEI--LKAQYVIG 165
Cdd:PRK08132  103 VYRFDLLPEPG---HRRPAFINLQQYYVEGYLVERAQAlPNIDLRWKNKVTGLEQHDDGVTLTVeTPDGPytLEADWVIA 179

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1267287696 166 CDGARSIVREQAGLTFEGPRTADTFIVVDAKEDDtnPLPLERIFHYQHPAMEGRNVMF------VpfkggWRVDLQLles 239
Cdd:PRK08132  180 CDGARSPLREMLGLEFEGRTFEDRFLIADVKMKA--DFPTERWFWFDPPFHPGQSVLLhrqpdnV-----WRIDFQL--- 249

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1267287696 240 dnPDDYTNIESVK--KWLPKV-----MDAKYaeRITWVSSYRFHQVVANSFtdakR--RILLAGEAAHLFAPFGARGLNS 310
Cdd:PRK08132  250 --GWDADPEAEKKpeNVIPRVrallgEDVPF--ELEWVSVYTFQCRRMDRF----RhgRVLFAGDAAHQVSPFGARGANS 321

                         330       340       350       360
                  ....*....|....*....|....*....|....*....|...
gi 1267287696 311 GIPDA---------VLAARGIEKALQSNSEEErinaiEAAANE 344
Cdd:PRK08132  322 GIQDAdnlawklalVLRGRAPDSLLDSYASER-----EFAADE 359
FAD_binding_3 pfam01494
FAD binding domain; This domain is involved in FAD binding in a number of enzymes.
 6-350 6.13e-40

FAD binding domain; This domain is involved in FAD binding in a number of enzymes.


Pssm-ID: 396193 [Multi-domain]  Cd Length: 348  Bit Score: 145.55  E-value: 6.13e-40
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1267287696   6 KYDAIVVGAGPVGLVAGLSLQKKGISTLVIEGDSfgRPRPGSRAIYLHSASLKLLEETaeGLGFTLAHNGIIWPVKRTFy 85
Cdd:pfam01494   1 ETDVLIVGGGPAGLMLALLLARAGVRVVLVERHA--TTSVLPRAHGLNQRTMELLRQA--GLEDRILAEGVPHEGMGLA- 75

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1267287696  86 kgkeVYVRDYGKD-ENLKSNRLPhfTALHQDEIEKHMYEACIKAGVEFLWDAPVKKLHITDSEVEVTITN-----DEILK 159
Cdd:pfam01494  76 ----FYNTRRRADlDFLTSPPRV--TVYPQTELEPILVEHAEARGAQVRFGTEVLSLEQDGDGVTAVVRDrrdgeEYTVR 149

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1267287696 160 AQYVIGCDGARSIVREQAGLTFEGPRTaDTFIVVDAKEDDTN-PLPLERIF-HYQHPAMEGRNVMFVPFKGG------WR 231
Cdd:pfam01494 150 AKYLVGCDGGRSPVRKTLGIEFEGFEG-VPFGSLDVLFDAPDlSDPVERAFvHYLIYAPHSRGFMVGPWRSAgreryyVQ 228

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1267287696 232 VDLQLLESDNPDDYTNiESVKKWLPKVMDAKYAE-RITWVSSYRFHQVVANSFTDAkrRILLAGEAAHLFAPFGARGLNS 310
Cdd:pfam01494 229 VPWDEEVEERPEEFTD-EELKQRLRSIVGIDLALvEILWKSIWGVASRVATRYRKG--RVFLAGDAAHIHPPTGGQGLNT 305

                         330       340       350       360
                  ....*....|....*....|....*....|....*....|
gi 1267287696 311 GIPDAVLAARGIEKALQSNSEEERINAIEAaanERRIAAK 350
Cdd:pfam01494 306 AIQDAFNLAWKLAAVLRGQAGESLLDTYSA---ERLPVAW 342
Ubi-OHases TIGR01988
Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family; This model represents a ...
 8-391 2.60e-24

Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family; This model represents a family of FAD-dependent hydroxylases (monooxygenases) which are all believed to act in the aerobic ubiquinone biosynthesis pathway. A separate set of hydroxylases, as yet undiscovered, are believed to be active under anaerobic conditions. In E. coli three enzyme activities have been described, UbiB (which acts first at position 6, see TIGR01982), UbiH (which acts at position 4) and UbiF (which acts at position 5). UbiH and UbiF are similar to one another and form the basis of this subfamily. Interestingly, E. coli contains another hydroxylase gene, called visC, that is highly similar to UbiF, adjacent to UbiH and, when mutated, results in a phenotype similar to that of UbiH (which has also been named visB). Several other species appear to have three homologs in this family, although they assort themselves differently on phylogenetic trees (e.g. Xylella and Mesorhizobium) making it difficult to ascribe a specific activity to each one. Eukaryotes appear to have only a single homolog in this subfamily (COQ6) which complements UbiH, but also possess a non-orthologous gene, COQ7 which complements UbiF. [Biosynthesis of cofactors, prosthetic groups, and carriers, Menaquinone and ubiquinone]


Pssm-ID: 273913 [Multi-domain]  Cd Length: 385  Bit Score: 103.44  E-value: 2.60e-24
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1267287696   8 DAIVVGAGPVGLVAGLSLQKKGISTLVIEGDSFGRPRPGS---RAIYLHSASLKLLEEtaegLGftlahngiIW----PV 80
Cdd:TIGR01988   1 DIVIVGGGMVGLALALALARSGLKVALIEATPLPAPADPGfdnRVSALSAASIRLLEK----LG--------VWdkiePA 68

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1267287696  81 KRTFYKGkeVYVRDYGKDENLksnrlpHFTA--LHQDE----IEKH-----MYEACIKA-GVEFLWDAPVKKLHITDSEV 148
Cdd:TIGR01988  69 RAQPIRD--IHVSDGGSFGAL------RFDAdeIGLEAlgyvVENRvlqqaLWERLQELpNVTLLCPARVVELPRHSDHV 140

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1267287696 149 EVTITNDEILKAQYVIGCDGARSIVREQAGLTFEG---PRTADTFIVvdAKEDDTNPLPLERiFHYQHPamegrnVMFVP 225
Cdd:TIGR01988 141 ELTLDDGQQLRARLLVGADGANSKVRQLAGIPTTGwdyGQSAVVANV--KHERPHQGTAWER-FTPTGP------LALLP 211

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1267287696 226 FKGGWrvdLQLLESDNPDDytnIESVK-----KWLPKVMDA--KYAERITWVSSyRFH----QVVANSFtdAKRRILLAG 294
Cdd:TIGR01988 212 LPDNR---SSLVWTLPPEE---AERLLalsdeEFLAELQRAfgSRLGAITLVGE-RHAfplsLTHAKRY--VAPRLALIG 282

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1267287696 295 EAAHLFAPFGARGLNSGIPDAVLAARGIEKALQSNSEEERINAIEAAANERRiaakWNRD---ASTTALHHLQGNS-PEM 370
Cdd:TIGR01988 283 DAAHTIHPLAGQGLNLGLRDVAALAEVLEDARRRGEDIGSLRVLQRYERRRR----FDNAamlGATDGLNRLFSNDfPPL 358

                         410       420
                  ....*....|....*....|.
gi 1267287696 371 NMKRDIAASMVSIVPRLGRWL 391
Cdd:TIGR01988 359 RLLRNLGLRLLNNLPPLKNFI 379
 
Name Accession Description Interval E-value
UbiH COG0654
2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases [Coenzyme ...
 5-389 1.46e-55

2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases [Coenzyme transport and metabolism, Energy production and conversion]; 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases is part of the Pathway/BioSystem: Ubiquinone biosynthesis


Pssm-ID: 440419 [Multi-domain]  Cd Length: 326  Bit Score: 185.91  E-value: 1.46e-55
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1267287696   5 KKYDAIVVGAGPVGLVAGLSLQKKGISTLVIEGDSfgRPRPGSRAIYLHSASLKLLEETaeGLGFTLAHNGIIWPVKRTF 84
Cdd:COG0654     2 MRTDVLIVGGGPAGLALALALARAGIRVTVVERAP--PPRPDGRGIALSPRSLELLRRL--GLWDRLLARGAPIRGIRVR 77

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1267287696  85 YK--GKEVYVRDYGKDenlksnRLPHFTALHQDEIEKHMYEACIKAGVEFLWDAPVKKLHITDSEVEVTITNDEILKAQY 162
Cdd:COG0654    78 DGsdGRVLARFDAAET------GLPAGLVVPRADLERALLEAARALGVELRFGTEVTGLEQDADGVTVTLADGRTLRADL 151

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1267287696 163 VIGCDGARSIVREQAGLTFEGPRTADTFIVVDakeddtnplplerifhyqhpamegrnvmfvpfkggwrVDLQLLesdnp 242
Cdd:COG0654   152 VVGADGARSAVRRLLGIGFTGRDYPQRALWAG-------------------------------------VRTELR----- 189

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1267287696 243 ddytniESVKKWLPKVMDakyAERITWVSSYRFHQVVANSFTdaKRRILLAGEAAHLFAPFGARGLNSGIPDAVLAARGI 322
Cdd:COG0654   190 ------ARLAAAGPRLGE---LLELSPRSAFPLRRRRAERWR--RGRVVLLGDAAHTMHPLGGQGANLALRDAAALAWKL 258

                         330       340       350       360       370       380
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1267287696 323 EKALQSNSEEERINAIEAaanERRIAAKWNRDASTTALHHLQGNSPEMNMKRDIAASMVSIVPRLGR 389
Cdd:COG0654   259 AAALRGRDDEAALARYER---ERRPRAARVQRAADALGRLFHPDSPPLRLLRNAGLRLLDRLPPLKG 322
PRK08132 PRK08132
FAD-dependent oxidoreductase; Provisional
 10-344 4.12e-48

FAD-dependent oxidoreductase; Provisional


Pssm-ID: 236158 [Multi-domain]  Cd Length: 547  Bit Score: 171.97  E-value: 4.12e-48
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1267287696  10 IVVGAGPVGLVAGLSLQKKGISTLVIEGDsfGRPRPGSRAIYLHSASLKLLEETaeGLGFTLAHNGIIWPVKRTFYKGKE 89
Cdd:PRK08132   27 VVVGAGPVGLALAIDLAQQGVPVVLLDDD--DTLSTGSRAICFAKRSLEIFDRL--GCGERMVDKGVSWNVGKVFLRDEE 102

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1267287696  90 VYVRDYGKDENlksNRLPHFTALHQDEIEKHMYEACIK-AGVEFLWDAPVKKLHITDSEVEVTI-TNDEI--LKAQYVIG 165
Cdd:PRK08132  103 VYRFDLLPEPG---HRRPAFINLQQYYVEGYLVERAQAlPNIDLRWKNKVTGLEQHDDGVTLTVeTPDGPytLEADWVIA 179

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1267287696 166 CDGARSIVREQAGLTFEGPRTADTFIVVDAKEDDtnPLPLERIFHYQHPAMEGRNVMF------VpfkggWRVDLQLles 239
Cdd:PRK08132  180 CDGARSPLREMLGLEFEGRTFEDRFLIADVKMKA--DFPTERWFWFDPPFHPGQSVLLhrqpdnV-----WRIDFQL--- 249

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1267287696 240 dnPDDYTNIESVK--KWLPKV-----MDAKYaeRITWVSSYRFHQVVANSFtdakR--RILLAGEAAHLFAPFGARGLNS 310
Cdd:PRK08132  250 --GWDADPEAEKKpeNVIPRVrallgEDVPF--ELEWVSVYTFQCRRMDRF----RhgRVLFAGDAAHQVSPFGARGANS 321

                         330       340       350       360
                  ....*....|....*....|....*....|....*....|...
gi 1267287696 311 GIPDA---------VLAARGIEKALQSNSEEErinaiEAAANE 344
Cdd:PRK08132  322 GIQDAdnlawklalVLRGRAPDSLLDSYASER-----EFAADE 359
FAD_binding_3 pfam01494
FAD binding domain; This domain is involved in FAD binding in a number of enzymes.
 6-350 6.13e-40

FAD binding domain; This domain is involved in FAD binding in a number of enzymes.


Pssm-ID: 396193 [Multi-domain]  Cd Length: 348  Bit Score: 145.55  E-value: 6.13e-40
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1267287696   6 KYDAIVVGAGPVGLVAGLSLQKKGISTLVIEGDSfgRPRPGSRAIYLHSASLKLLEETaeGLGFTLAHNGIIWPVKRTFy 85
Cdd:pfam01494   1 ETDVLIVGGGPAGLMLALLLARAGVRVVLVERHA--TTSVLPRAHGLNQRTMELLRQA--GLEDRILAEGVPHEGMGLA- 75

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1267287696  86 kgkeVYVRDYGKD-ENLKSNRLPhfTALHQDEIEKHMYEACIKAGVEFLWDAPVKKLHITDSEVEVTITN-----DEILK 159
Cdd:pfam01494  76 ----FYNTRRRADlDFLTSPPRV--TVYPQTELEPILVEHAEARGAQVRFGTEVLSLEQDGDGVTAVVRDrrdgeEYTVR 149

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1267287696 160 AQYVIGCDGARSIVREQAGLTFEGPRTaDTFIVVDAKEDDTN-PLPLERIF-HYQHPAMEGRNVMFVPFKGG------WR 231
Cdd:pfam01494 150 AKYLVGCDGGRSPVRKTLGIEFEGFEG-VPFGSLDVLFDAPDlSDPVERAFvHYLIYAPHSRGFMVGPWRSAgreryyVQ 228

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1267287696 232 VDLQLLESDNPDDYTNiESVKKWLPKVMDAKYAE-RITWVSSYRFHQVVANSFTDAkrRILLAGEAAHLFAPFGARGLNS 310
Cdd:pfam01494 229 VPWDEEVEERPEEFTD-EELKQRLRSIVGIDLALvEILWKSIWGVASRVATRYRKG--RVFLAGDAAHIHPPTGGQGLNT 305

                         330       340       350       360
                  ....*....|....*....|....*....|....*....|
gi 1267287696 311 GIPDAVLAARGIEKALQSNSEEERINAIEAaanERRIAAK 350
Cdd:pfam01494 306 AIQDAFNLAWKLAAVLRGQAGESLLDTYSA---ERLPVAW 342
mhpA PRK06183
bifunctional 3-(3-hydroxy-phenyl)propionate/3-hydroxycinnamic acid hydroxylase;
7-337 2.44e-37

bifunctional 3-(3-hydroxy-phenyl)propionate/3-hydroxycinnamic acid hydroxylase;


Pssm-ID: 235727 [Multi-domain]  Cd Length: 500  Bit Score: 141.58  E-value: 2.44e-37
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1267287696   7 YDAIVVGAGPVGLVAGLSLQKKGISTLVIE--GDSFGRPRpgsrAIYLHSASLKLLEetAEGLGFTLAHNGIIWPVKRtF 84
Cdd:PRK06183   11 TDVVIVGAGPVGLTLANLLGQYGVRVLVLErwPTLYDLPR----AVGIDDEALRVLQ--AIGLADEVLPHTTPNHGMR-F 83

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1267287696  85 YKGK-EVY-------VRDYGkdenlksnrLPHFTALHQDEIEKHMYEACIK-AGVEFLWDAPVKKLHITDSEVEVTITND 155
Cdd:PRK06183   84 LDAKgRCLaeiarpsTGEFG---------WPRRNAFHQPLLEAVLRAGLARfPHVRVRFGHEVTALTQDDDGVTVTLTDA 154

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1267287696 156 ----EILKAQYVIGCDGARSIVREQAGLTFEGPRTADTFIVVDAKeddTNPLPLERIFHYQH--PAmegRNVMFVPFKGG 229
Cdd:PRK06183  155 dgqrETVRARYVVGCDGANSFVRRTLGVPFEDLTFPERWLVVDVL---IANDPLGGPHTYQYcdPA---RPYTSVRLPHG 228

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1267287696 230 W-RVDLQLLESDNPDDYTNIESVKKWLPKVMDAKYAERITWVSSYRFHQVVANSFTDakRRILLAGEAAHLFAPFGARGL 308
Cdd:PRK06183  229 RrRWEFMLLPGETEEQLASPENVWRLLAPWGPTPDDAELIRHAVYTFHARVADRWRS--GRVLLAGDAAHLMPPFAGQGM 306

                         330       340       350
                  ....*....|....*....|....*....|....*...
gi 1267287696 309 NSGIPDA---------VLAARGIEKALQSNSEEERINA 337
Cdd:PRK06183  307 NSGIRDAanlawklaaVLRGRAGDALLDTYEQERRPHA 344
PRK08244 PRK08244
monooxygenase;
6-319 2.46e-29

monooxygenase;


Pssm-ID: 236199 [Multi-domain]  Cd Length: 493  Bit Score: 119.08  E-value: 2.46e-29
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1267287696   6 KYDAIVVGAGPVGLVAGLSLQKKGISTLVIEgdSFGRPRPGSRAIYLHSASLKLLEEtaEGLGFTLAHNGIiwPVKRTFY 85
Cdd:PRK08244    2 KYEVIIIGGGPVGLMLASELALAGVKTCVIE--RLKETVPYSKALTLHPRTLEILDM--RGLLERFLEKGR--KLPSGHF 75

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1267287696  86 KGkevyvRDYGKDENLKSNRLPHFTALHQDEIEKHMYEACIKAGVEFLWDAPVKKLHITDSEVEVTITND---EILKAQY 162
Cdd:PRK08244   76 AG-----LDTRLDFSALDTSSNYTLFLPQAETEKVLEEHARSLGVEIFRGAEVLAVRQDGDGVEVVVRGPdglRTLTSSY 150

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1267287696 163 VIGCDGARSIVREQAGLTFEGPRTADTFIVVDAKEDDTNPLPLerifhYQHPAMEGrNVMFVPFKGG-WRVDLQLLESDN 241
Cdd:PRK08244  151 VVGADGAGSIVRKQAGIAFPGTDATFTAMLGDVVLKDPPPSSV-----LSLCTREG-GVMIVPLSGGiYRVLIIDPERPQ 224

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1267287696 242 --PDDYTNIESVKKWLPKVMDAKYA-ERITWVSsyRFhqvvANSFTDAKR----RILLAGEAAHLFAPFGARGLNSGIPD 314
Cdd:PRK08244  225 vpKDEPVTLEELKTSLIRICGTDFGlNDPVWMS--RF----GNATRQAERyrsgRIFLAGDAAHIHFPAGGQGLNVGLQD 298

                         330
                  ....*....|
gi 1267287696 315 AV-----LAA 319
Cdd:PRK08244  299 AMnlgwkLAA 308
PRK06834 PRK06834
hypothetical protein; Provisional
 6-316 1.14e-24

hypothetical protein; Provisional


Pssm-ID: 235870 [Multi-domain]  Cd Length: 488  Bit Score: 105.49  E-value: 1.14e-24
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1267287696   6 KYDAIVVGAGPVGLVAGLSLQKKGISTLVIEGdsfgRPR---PGSRAIYLHSASLKLLEEtaeglgftlahNGIiwpVKR 82
Cdd:PRK06834    3 EHAVVIAGGGPTGLMLAGELALAGVDVAIVER----RPNqelVGSRAGGLHARTLEVLDQ-----------RGI---ADR 64

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1267287696  83 TFYKGKEVYVRDYGK---DENLKSNRLPHFTALHQDEIEKHMYEACIKAGVEFLWDAPVKKLHITDSEVEVTITNDEILK 159
Cdd:PRK06834   65 FLAQGQVAQVTGFAAtrlDISDFPTRHNYGLALWQNHIERILAEWVGELGVPIYRGREVTGFAQDDTGVDVELSDGRTLR 144

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1267287696 160 AQYVIGCDGARSIVREQAGLTFEGPRTADTFIVVDAKEDDTNPLPLER----IFHYQHPAMEGR-NVMFvpfkggwrVDL 234
Cdd:PRK06834  145 AQYLVGCDGGRSLVRKAAGIDFPGWDPTTSYLIAEVEMTEEPEWGVHRdalgIHAFGRLEDEGPvRVMV--------TEK 216

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1267287696 235 QLLESDNPddytNIESVKKWLPKVMDAKY-AERITWVSsyRFHQVVANSFTDAKRRILLAGEAAHLFAPFGARGLNSGIP 313
Cdd:PRK06834  217 QVGATGEP----TLDDLREALIAVYGTDYgIHSPTWIS--RFTDMARQAASYRDGRVLLAGDAAHVHSPVGGQGLNTGVQ 290


                  ...
gi 1267287696 314 DAV 316
Cdd:PRK06834  291 DAV 293
Ubi-OHases TIGR01988
Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family; This model represents a ...
 8-391 2.60e-24

Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family; This model represents a family of FAD-dependent hydroxylases (monooxygenases) which are all believed to act in the aerobic ubiquinone biosynthesis pathway. A separate set of hydroxylases, as yet undiscovered, are believed to be active under anaerobic conditions. In E. coli three enzyme activities have been described, UbiB (which acts first at position 6, see TIGR01982), UbiH (which acts at position 4) and UbiF (which acts at position 5). UbiH and UbiF are similar to one another and form the basis of this subfamily. Interestingly, E. coli contains another hydroxylase gene, called visC, that is highly similar to UbiF, adjacent to UbiH and, when mutated, results in a phenotype similar to that of UbiH (which has also been named visB). Several other species appear to have three homologs in this family, although they assort themselves differently on phylogenetic trees (e.g. Xylella and Mesorhizobium) making it difficult to ascribe a specific activity to each one. Eukaryotes appear to have only a single homolog in this subfamily (COQ6) which complements UbiH, but also possess a non-orthologous gene, COQ7 which complements UbiF. [Biosynthesis of cofactors, prosthetic groups, and carriers, Menaquinone and ubiquinone]


Pssm-ID: 273913 [Multi-domain]  Cd Length: 385  Bit Score: 103.44  E-value: 2.60e-24
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1267287696   8 DAIVVGAGPVGLVAGLSLQKKGISTLVIEGDSFGRPRPGS---RAIYLHSASLKLLEEtaegLGftlahngiIW----PV 80
Cdd:TIGR01988   1 DIVIVGGGMVGLALALALARSGLKVALIEATPLPAPADPGfdnRVSALSAASIRLLEK----LG--------VWdkiePA 68

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1267287696  81 KRTFYKGkeVYVRDYGKDENLksnrlpHFTA--LHQDE----IEKH-----MYEACIKA-GVEFLWDAPVKKLHITDSEV 148
Cdd:TIGR01988  69 RAQPIRD--IHVSDGGSFGAL------RFDAdeIGLEAlgyvVENRvlqqaLWERLQELpNVTLLCPARVVELPRHSDHV 140

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1267287696 149 EVTITNDEILKAQYVIGCDGARSIVREQAGLTFEG---PRTADTFIVvdAKEDDTNPLPLERiFHYQHPamegrnVMFVP 225
Cdd:TIGR01988 141 ELTLDDGQQLRARLLVGADGANSKVRQLAGIPTTGwdyGQSAVVANV--KHERPHQGTAWER-FTPTGP------LALLP 211

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1267287696 226 FKGGWrvdLQLLESDNPDDytnIESVK-----KWLPKVMDA--KYAERITWVSSyRFH----QVVANSFtdAKRRILLAG 294
Cdd:TIGR01988 212 LPDNR---SSLVWTLPPEE---AERLLalsdeEFLAELQRAfgSRLGAITLVGE-RHAfplsLTHAKRY--VAPRLALIG 282

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1267287696 295 EAAHLFAPFGARGLNSGIPDAVLAARGIEKALQSNSEEERINAIEAAANERRiaakWNRD---ASTTALHHLQGNS-PEM 370
Cdd:TIGR01988 283 DAAHTIHPLAGQGLNLGLRDVAALAEVLEDARRRGEDIGSLRVLQRYERRRR----FDNAamlGATDGLNRLFSNDfPPL 358

                         410       420
                  ....*....|....*....|.
gi 1267287696 371 NMKRDIAASMVSIVPRLGRWL 391
Cdd:TIGR01988 359 RLLRNLGLRLLNNLPPLKNFI 379
PRK06184 PRK06184
hypothetical protein; Provisional
 8-334 7.84e-24

hypothetical protein; Provisional


Pssm-ID: 235728 [Multi-domain]  Cd Length: 502  Bit Score: 103.14  E-value: 7.84e-24
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1267287696   8 DAIVVGAGPVGLVAGLSLQKKGISTLVIEGDsfGRPRPGSRAIYLHSASLKLLEEtaegLGFT--LAHNGIIWPVKRtFY 85
Cdd:PRK06184    5 DVLIVGAGPTGLTLAIELARRGVSFRLIEKA--PEPFPGSRGKGIQPRTQEVFDD----LGVLdrVVAAGGLYPPMR-IY 77

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1267287696  86 KGKEVyVRDYGKDENLK-SNRLPHFTALH--QDEIEKHMYEACIKAGVEFLWDAPVKKLHITDSEVEVTI---TNDEILK 159
Cdd:PRK06184   78 RDDGS-VAESDMFAHLEpTPDEPYPLPLMvpQWRTERILRERLAELGHRVEFGCELVGFEQDADGVTARVagpAGEETVR 156

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1267287696 160 AQYVIGCDGARSIVREQAGLTFEGP-RTADTFIVVDAKEDDtnplpLERIFHYQHPAMEGRNVMFVPFKG--GWRVDLQL 236
Cdd:PRK06184  157 ARYLVGADGGRSFVRKALGIGFPGEtLGIDRMLVADVSLTG-----LDRDAWHQWPDGDMGMIALCPLPGtdLFQIQAPL 231

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1267287696 237 LESDNPDdytnieSVKKWLPKVMDAKYAER------ITWVSSYRFHQVVANSFTDAkrRILLAGEAAHLFAPFGARGLNS 310
Cdd:PRK06184  232 PPGGEPD------LSADGLTALLAERTGRTdirlhsVTWASAFRMNARLADRYRVG--RVFLAGDAAHVHPPAGGQGLNT 303

                         330       340       350
                  ....*....|....*....|....*....|.
gi 1267287696 311 GIPDAV-----LAA--RGIEKALQSNSEEER 334
Cdd:PRK06184  304 SVQDAYnlgwkLAAvlAGAPEALLDTYEEER 334
PRK06126 PRK06126
hypothetical protein; Provisional
 10-369 1.37e-22

hypothetical protein; Provisional


Pssm-ID: 235704 [Multi-domain]  Cd Length: 545  Bit Score: 99.68  E-value: 1.37e-22
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1267287696  10 IVVGAGPVGLVAGLSLQKKGISTLVIEGDSFGRPRPG-----------------SRAIYlhsaSLKLLEETAEGLGFTLA 72
Cdd:PRK06126   11 LIVGGGPVGLALALDLGRRGVDSILVERKDGTAFNPKanttsarsmehfrrlgiADEVR----SAGLPVDYPTDIAYFTR 86

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1267287696  73 HNGiiWPVKR-TFYKGKEVYVRDYGKDENLKSNRLPHftALHQDEIEKHMYE-ACIKAGVEFLWDAPVKklHITDSEVEV 150
Cdd:PRK06126   87 LTG--YELARfRLPSAREAITPVGGPDGSWPSPELPH--RIPQKYLEPILLEhAAAQPGVTLRYGHRLT--DFEQDADGV 160

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1267287696 151 TITNDEI-------LKAQYVIGCDGARSIVREQAGLTFEGP----RTADTFIVVDAKEDdtnPLPLERIFHYQHPAMEGR 219
Cdd:PRK06126  161 TATVEDLdggesltIRADYLVGCDGARSAVRRSLGISYEGTsglqRDLSIYIRAPGLAA---LVGHDPAWMYWLFNPDRR 237

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1267287696 220 NVMF-VPFKGGWRVDlQLLESDNPDDYTNIEsVKKWLPKVMDAKYAERITWVSSYRFHQVVANSFTdaKRRILLAGEAAH 298
Cdd:PRK06126  238 GVLVaIDGRDEWLFH-QLRGGEDEFTIDDVD-ARAFVRRGVGEDIDYEVLSVVPWTGRRLVADSYR--RGRVFLAGDAAH 313

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1267287696 299 LFAPFGARGLNSGIPDAV-----LAA--RGIE-KALQSNSEEERinaieaaaneRRIAAKwNRDASTTALHHLQ--GNSP 368
Cdd:PRK06126  314 LFTPTGGYGMNTGIGDAVnlawkLAAvlNGWAgPALLDSYEAER----------RPIAAR-NTDYARRNADALGsfPVPP 382


                  .
gi 1267287696 369 E 369
Cdd:PRK06126  383 E 383
FixC COG0644
Dehydrogenase (flavoprotein) [Energy production and conversion];
14-329 3.52e-21

Dehydrogenase (flavoprotein) [Energy production and conversion];


Pssm-ID: 440409 [Multi-domain]  Cd Length: 281  Bit Score: 92.72  E-value: 3.52e-21
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1267287696  14 AGPVGLVAGLSLQKKGISTLVIEGDSFGRPRPGSRAIYLHSasLKLLEEtaegLGFTLAHNGIIWPVKRTFYKGKEVYVR 93
Cdd:COG0644     1 AGPAGSAAARRLARAGLSVLLLEKGSFPGDKICGGGLLPRA--LEELEP----LGLDEPLERPVRGARFYSPGGKSVELP 74

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1267287696  94 DygkdenlksnRLPHFTALHQDEIEKHMYEACIKAGVEFLWDAPVKKLHITDSEVEVTITNDEILKAQYVIGCDGARSIV 173
Cdd:COG0644    75 P----------GRGGGYVVDRARFDRWLAEQAEEAGAEVRTGTRVTDVLRDDGRVVVRTGDGEEIRADYVVDADGARSLL 144

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1267287696 174 REQAGLTFEGPRTADTFIVVDA--KEDDTNPLPLERIFHYQHPAMegrnvmfvPFKGGWRVDLqllesdnPDDYTNIE-S 250
Cdd:COG0644   145 ARKLGLKRRSDEPQDYALAIKEhwELPPLEGVDPGAVEFFFGEGA--------PGGYGWVFPL-------GDGRVSVGiP 209

                         250       260       270       280       290       300       310
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1267287696 251 VKKWLPKVmdakyaeritwvssyrfhqvvansftdAKRRILLAGEAAHLFAPFGARGLNSGIPDAVLAARGIEKALQSN 329
Cdd:COG0644   210 LGGPRPRL---------------------------VGDGVLLVGDAAGFVDPLTGEGIHLAMKSGRLAAEAIAEALEGG 261
PRK07190 PRK07190
FAD-binding protein;
3-315 1.29e-20

FAD-binding protein;


Pssm-ID: 235955 [Multi-domain]  Cd Length: 487  Bit Score: 93.34  E-value: 1.29e-20
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1267287696   3 KEKKYDAIVVGAGPVGLVAGLSLQKKGISTLVIegDSFGRPRPGSRAIYLHSASLKLLE-----ETAEGLGFTlAHNGII 77
Cdd:PRK07190    2 STQVTDVVIIGAGPVGLMCAYLGQLCGLNTVIV--DKSDGPLEVGRADALNARTLQLLElvdlfDELYPLGKP-CNTSSV 78

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1267287696  78 WPvkrtfyKGKEVYVRDYGKDEnLKSNRLPHFTALHQDEIEKHMYEACIKAGVEFLWDAPVKKLHITDSEVEVTITNDEI 157
Cdd:PRK07190   79 WA------NGKFISRQSSWWEE-LEGCLHKHFLMLGQSYVEKLLDDKLKEAGAAVKRNTSVVNIELNQAGCLTTLSNGER 151

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1267287696 158 LKAQYVIGCDGARSIVREQAGLTFEGPRTADTFIVVDAkEDDTNPLPLERIFHYQHpamEGRNVMFVPFKGgwRVDLQLL 237
Cdd:PRK07190  152 IQSRYVIGADGSRSFVRNHFNVPFEIIRPQIIWAVIDG-VIDTDFPKVPEIIVFQA---ETSDVAWIPREG--EIDRFYV 225

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1267287696 238 ESDNpDDYTNIESVKK----WLPKVMDAKyaeRITWVSSYRFHQVVANSFTdAKRRILLAGEAAHLFAPFGARGLNSGIP 313
Cdd:PRK07190  226 RMDT-KDFTLEQAIAKinhaMQPHRLGFK---EIVWFSQFSVKESVAEHFF-IQDRIFLAGDACHIHSVNGGQGLNTGLA 300


                  ..
gi 1267287696 314 DA 315
Cdd:PRK07190  301 DA 302
GG-red-SF TIGR02032
geranylgeranyl reductase family; This model represents a subfamily which includes ...
 7-322 3.77e-17

geranylgeranyl reductase family; This model represents a subfamily which includes geranylgeranyl reductases involved in chlorophyll and bacteriochlorophyll biosynthesis as well as other related enzymes which may also act on geranylgeranyl groups or related substrates. [Biosynthesis of cofactors, prosthetic groups, and carriers, Chlorophyll and bacteriochlorphyll]


Pssm-ID: 273936 [Multi-domain]  Cd Length: 295  Bit Score: 81.21  E-value: 3.77e-17
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1267287696   7 YDAIVVGAGPVGLVAGLSLQKKGISTLVIEGDSFGRPRPGSRAIylhsaSLKLLEETAEGL---------GFTLAHNGIi 77
Cdd:TIGR02032   1 YDVVVVGAGPAGASAAYRLADKGLRVLLLEKKSFPRYKPCGGAL-----SPRALEELDLPGelivnlvrgARFFSPNGD- 74

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1267287696  78 wpVKRTFYKGKEVYVRDygkdenlksnrlphftalhQDEIEKHMYEACIKAGVEFLWDAPVKKLHITDSEVEVTITNDEI 157
Cdd:TIGR02032  75 --SVEIPIETELAYVID-------------------RDAFDEQLAERAQEAGAELRLGTRVLDVEIHDDRVVVIVRGSEG 133

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1267287696 158 -LKAQYVIGCDGARSIVREQAGLTFEGPRTADTF-IVVDAKEDDTNPLPLERIFHYQhPAMEGRNVMFVPFKGGWRVDLQ 235
Cdd:TIGR02032 134 tVTAKIVIGADGSRSIVAKKLGLKKEPREYGVAArAEVEMPDEEVDEDFVEVYIDRG-IVPGGYGWVFPKGDGTANVGVG 212

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1267287696 236 LLESDNPDDYTNIEsvKKWL---PKVMDAKYAERITWVSSYRFhqvvaNSFTDAKRRILLAGEAAHLFAPFGARGLNSGI 312
Cdd:TIGR02032 213 SRSAEEGEDPKKYL--KDFLarrPELKDAETVEVCGALIPIGR-----PDEKLVRGNVLLVGDAAGHVNPLTGEGIYYAM 285

                         330
                  ....*....|
gi 1267287696 313 PDAVLAARGI 322
Cdd:TIGR02032 286 RSGDIAAEVV 295
PRK07494 PRK07494
UbiH/UbiF family hydroxylase;
1-360 8.93e-15

UbiH/UbiF family hydroxylase;


Pssm-ID: 181001 [Multi-domain]  Cd Length: 388  Bit Score: 75.32  E-value: 8.93e-15
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1267287696   1 MGKEKKYDAIVVGAGPVGLVAGLSLQKKGISTLVIegdsfGRPRPGS--RAIYLHSASLKLLEEtaegLGftlahngiIW 78
Cdd:PRK07494    2 LMEKEHTDIAVIGGGPAGLAAAIALARAGASVALV-----APEPPYAdlRTTALLGPSIRFLER----LG--------LW 64

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1267287696  79 PVKRtfykgkevyvrdyGKDENLKS-------NRLP-----HFTA---------------LHQDEIEKHMYEaciKAGVE 131
Cdd:PRK07494   65 ARLA-------------PHAAPLQSmrivdatGRLIrapevRFRAaeigedafgynipnwLLNRALEARVAE---LPNIT 128

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1267287696 132 fLWDAPVKKLHITDSEVEVTITNDEILKAQYVIGCDGARSIVREQAGL---TFEGPRTADTFIVvdakeddTNPLPLERI 208
Cdd:PRK07494  129 -RFGDEAESVRPREDEVTVTLADGTTLSARLVVGADGRNSPVREAAGIgvrTWSYPQKALVLNF-------THSRPHQNV 200

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1267287696 209 ---FHYQH-PamegrnVMFVPFKGG-----WRVD----LQLLESDnpddytniesvkkwlpkvmDAKYAERITWVSSYRF 275
Cdd:PRK07494  201 steFHTEGgP------FTQVPLPGRrsslvWVVRpaeaERLLALS-------------------DAALSAAIEERMQSML 255

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1267287696 276 HQV--------------VANSFtdAKRRILLAGEAAHLFAPFGARGLNSGIPDavlaARGIEKALQSNSEEERINAIEAA 341
Cdd:PRK07494  256 GKLtlepgrqawplsgqVAHRF--AAGRTALVGEAAHVFPPIGAQGLNLGLRD----VATLVEIVEDRPEDPGSAAVLAA 329

                         410
                  ....*....|....*....
gi 1267287696 342 ANERRIAAKWNRDASTTAL 360
Cdd:PRK07494  330 YDRARRPDILSRTASVDLL 348
PRK08243 PRK08243
4-hydroxybenzoate 3-monooxygenase; Validated
 11-332 9.69e-12

4-hydroxybenzoate 3-monooxygenase; Validated


Pssm-ID: 236198 [Multi-domain]  Cd Length: 392  Bit Score: 65.98  E-value: 9.69e-12
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1267287696  11 VVGAGPVGLVAGLSLQKKGISTLVIEGDS----FGRPRPGsraiYLHSASLKLLEET-------AEGL---GFTLAHNGI 76
Cdd:PRK08243    7 IIGAGPAGLLLGQLLHLAGIDSVVLERRSreyvEGRIRAG----VLEQGTVDLLREAgvgermdREGLvhdGIELRFDGR 82

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1267287696  77 IWPV---KRTfyKGKEVYVrdYGkdenlksnrlphftalhQDEIEKHMYEACIKAGVEFLWDAPVKKLHITDSEV-EVTI 152
Cdd:PRK08243   83 RHRIdltELT--GGRAVTV--YG-----------------QTEVTRDLMAARLAAGGPIRFEASDVALHDFDSDRpYVTY 141

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1267287696 153 TND---EILKAQYVIGCDGARSIVR----EQAGLTFE--------GprtadtfIVVDAKeddtnPLPLERIFHyQHP--- 214
Cdd:PRK08243  142 EKDgeeHRLDCDFIAGCDGFHGVSRasipAGALRTFErvypfgwlG-------ILAEAP-----PVSDELIYA-NHErgf 208

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1267287696 215 ---AMEGRNVMfvpfkggwRVDLQLLESDNPDDYTNiESVkkW--LPKVMDAKYAERITWVSSY-----RFHQVVANsfT 284
Cdd:PRK08243  209 alcSMRSPTRS--------RYYLQCPLDDKVEDWSD-ERF--WdeLRRRLPPEDAERLVTGPSIeksiaPLRSFVAE--P 275

                         330       340       350       360
                  ....*....|....*....|....*....|....*....|....*...
gi 1267287696 285 DAKRRILLAGEAAHLFAPFGARGLNSGIPDAVLAARGIEKALQSNSEE 332
Cdd:PRK08243  276 MQYGRLFLAGDAAHIVPPTGAKGLNLAASDVRYLARALVEFYREGDTA 323
PRK06475 PRK06475
FAD-binding protein;
10-361 3.75e-11

FAD-binding protein;


Pssm-ID: 180582 [Multi-domain]  Cd Length: 400  Bit Score: 64.46  E-value: 3.75e-11
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1267287696  10 IVVGAGPVGLVAGLSLQKKGISTLVIEgdsfgrprpgsraiylhsaSLKLLEETAEGLGFT------LAHNGIIWPVKRT 83
Cdd:PRK06475    6 LIAGAGVAGLSAALELAARGWAVTIIE-------------------KAQELSEVGAGLQLApnamrhLERLGVADRLSGT 66

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1267287696  84 FYKGKEVYVRDYGKDE--------NLKSNRLPH-FTALHQDEIEKHMYEACIKA-GVEFLWDAPVKKLHITDSEVEVTI- 152
Cdd:PRK06475   67 GVTPKALYLMDGRKARpllamqlgDLARKRWHHpYIVCHRADLQSALLDACRNNpGIEIKLGAEMTSQRQTGNSITATIi 146

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1267287696 153 -TN-DEILKAQYVIGCDGARSIVREQAGLT---FEGPRTADTFIVVDAkeddtnplpLERIFHYQHPAME------GRNV 221
Cdd:PRK06475  147 rTNsVETVSAAYLIACDGVWSMLRAKAGFSkarFSGHIAWRTTLAADA---------LPASFLSAMPEHKavsawlGNKA 217

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1267287696 222 MFV--PFKGGWRVDL-QLLESDNPD-------DYTNIESV-KKWLPKVMDAkYAERITWvSSYRFHQVVANSFTDAKRRI 290
Cdd:PRK06475  218 HFIayPVKGGKFFNFvAITGGENPGevwsktgDKAHLKSIyADWNKPVLQI-LAAIDEW-TYWPLFEMADAQFVGPDRTI 295

                         330       340       350       360       370       380       390
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1267287696 291 LLaGEAAHLFAPFGARGLNSGIPDAVLAArgieKALQSNSEEERINAIEAAANERRIAAKWNRDASTTALH 361
Cdd:PRK06475  296 FL-GDASHAVTPFAAQGAAMAIEDAAALA----EALDSDDQSAGLKRFDSVRKERIAAVAKRGQLNRFAYH 361
PRK07364 PRK07364
FAD-dependent hydroxylase;
7-327 5.23e-11

FAD-dependent hydroxylase;


Pssm-ID: 236001 [Multi-domain]  Cd Length: 415  Bit Score: 63.88  E-value: 5.23e-11
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1267287696   7 YDAIVVGAGPVGLVAGLSLQKKGISTLVIEGDSFGRPRPGSRAIYLHSASLKLLEetaeGLGftlahngiIWPvKRTFYK 86
Cdd:PRK07364   19 YDVAIVGGGIVGLTLAAALKDSGLRIALIEAQPAEAAAAKGQAYALSLLSARIFE----GIG--------VWE-KILPQI 85

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1267287696  87 GKEVYVR----DYGK-----DENLKSNRLPHfTALHQdEIEKHMYEACIKAG-VEFLWDAPVKKLHITDSEVEVTITNDE 156
Cdd:PRK07364   86 GKFRQIRlsdaDYPGvvkfqPTDLGTEALGY-VGEHQ-VLLEALQEFLQSCPnITWLCPAEVVSVEYQQDAATVTLEIEG 163

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1267287696 157 I---LKAQYVIGCDGARSIVREQAGLTFEG---PRTADTFIV-VDAKEDDTN-------------PLPLERifhYQ---- 212
Cdd:PRK07364  164 KqqtLQSKLVVAADGARSPIRQAAGIKTKGwkyWQSCVTATVkHEAPHNDIAyerfwpsgpfailPLPGNR---CQivwt 240

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1267287696 213 --HPAMEgrnvmfvpfkggwrvdlQLLESDNPDdytNIESVKKWLPKVMDakyaeRITWVSSYRFHQV-VANSFTDAKRR 289
Cdd:PRK07364  241 apHAQAK-----------------ALLALPEAE---FLAELQQRYGDQLG-----KLELLGDRFLFPVqLMQSDRYVQHR 295

                         330       340       350
                  ....*....|....*....|....*....|....*...
gi 1267287696 290 ILLAGEAAHLFAPFGARGLNSGIPDAVLAARGIEKALQ 327
Cdd:PRK07364  296 LALVGDAAHCCHPVGGQGLNLGIRDAAALAQVLQTAHQ 333
PRK08294 PRK08294
phenol 2-monooxygenase; Provisional
 145-339 7.64e-11

phenol 2-monooxygenase; Provisional


Pssm-ID: 236223 [Multi-domain]  Cd Length: 634  Bit Score: 63.85  E-value: 7.64e-11
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1267287696 145 DSEVEVTIT----------NDEILKAQYVIGCDGARSIVREQAGLTFEGPRTADTFIVVDAKEdDTNpLPLERIFHYQHP 214
Cdd:PRK08294  174 EGEYPVTVTlrrtdgehegEEETVRAKYVVGCDGARSRVRKAIGRELRGDSANHAWGVMDVLA-VTD-FPDIRLKCAIQS 251

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1267287696 215 AMEGrNVMFVPFKGGW--R--VDLQLLESDNPDDYTN------IESVKKWL-PKVMDAKyaeRITWVSSYRFHQVVANSF 283
Cdd:PRK08294  252 ASEG-SILLIPREGGYlvRlyVDLGEVPPDERVAVRNttveevIAKAQRILhPYTLDVK---EVAWWSVYEVGQRLTDRF 327

                         170       180       190       200       210       220       230
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1267287696 284 TDAKR--------RILLAGEAAHLFAPFGARGLNSGIPD---------AVLAARGIEKALQSNSEEERINAIE 339
Cdd:PRK08294  328 DDVPAeeagtrlpRVFIAGDACHTHSAKAGQGMNVSMQDgfnlgwklaAVLSGRSPPELLHTYSAERQAIAQE 400
PRK07333 PRK07333
ubiquinone biosynthesis hydroxylase;
7-325 3.28e-10

ubiquinone biosynthesis hydroxylase;


Pssm-ID: 180935 [Multi-domain]  Cd Length: 403  Bit Score: 61.53  E-value: 3.28e-10
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1267287696   7 YDAIVVGAGPVGLVAGLSLQKKG--ISTLVIEGDSFGRPRPGSRAIYLHSASLKLLEEtaegLGftlahngiIW-PVKRT 83
Cdd:PRK07333    2 CDVVIAGGGYVGLALAVALKQAAphLPVTVVDAAPAGAWSRDPRASAIAAAARRMLEA----LG--------VWdEIAPE 69

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1267287696  84 FYKGKEVYVRDYGKDENLKsnrlPHFTALHQD----EIEKHMYE----------ACIKAGVEFLWDAPVKKLHITDSEVE 149
Cdd:PRK07333   70 AQPITDMVITDSRTSDPVR----PVFLTFEGEvepgEPFAHMVEnrvlinalrkRAEALGIDLREATSVTDFETRDEGVT 145

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1267287696 150 VTITNDEILKAQYVIGCDGARSIVREQAGL-TFEGPRTADTFIVVDAKEDDTNPLPLERIFhyqhPAMEgrnVMFVPFKG 228
Cdd:PRK07333  146 VTLSDGSVLEARLLVAADGARSKLRELAGIkTVGWDYGQSGIVCTVEHERPHGGRAEEHFL----PAGP---FAILPLKG 218

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1267287696 229 G-----W---RVDLQ-LLESDNPDDYTNIEsvkkwlpKVMDAKYAErITWVSSYR---FHQVVANSFTdaKRRILLAGEA 296
Cdd:PRK07333  219 NrsslvWterTADAErLVALDDLVFEAELE-------QRFGHRLGE-LKVLGKRRafpLGLTLARSFV--APRFALVGDA 288

                         330       340       350
                  ....*....|....*....|....*....|
gi 1267287696 297 AHLFAPFGARGLNSGIPD-AVLAARGIEKA 325
Cdd:PRK07333  289 AHGIHPIAGQGLNLGLKDvAALAEVVVEAA 318
PRK09126 PRK09126
FAD-dependent hydroxylase;
5-179 5.51e-10

FAD-dependent hydroxylase;


Pssm-ID: 236385 [Multi-domain]  Cd Length: 392  Bit Score: 60.73  E-value: 5.51e-10
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1267287696   5 KKYDAIVVGAGPVGLVAGLSLQKKGISTLVIEG---DSFGRPRPGSRAIYLHSASLKLLEETaeGLGFTLAHNGiIWPVK 81
Cdd:PRK09126    2 MHSDIVVVGAGPAGLSFARSLAGSGLKVTLIERqplAALADPAFDGREIALTHASREILQRL--GAWDRIPEDE-ISPLR 78

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1267287696  82 RT-FYKGKEVYVRDYGKDENlKSNRLPHFTALHQdeIEKHMYEACI-KAGVEFLWDAPVKKLHITDSEVEVTITNDEILK 159
Cdd:PRK09126   79 DAkVLNGRSPFALTFDARGR-GADALGYLVPNHL--IRRAAYEAVSqQDGIELLTGTRVTAVRTDDDGAQVTLANGRRLT 155

                         170       180
                  ....*....|....*....|
gi 1267287696 160 AQYVIGCDGARSIVREQAGL 179
Cdd:PRK09126  156 ARLLVAADSRFSATRRQLGI 175
DadA COG0665
Glycine/D-amino acid oxidase (deaminating) [Amino acid transport and metabolism];
5-171 9.65e-10

Glycine/D-amino acid oxidase (deaminating) [Amino acid transport and metabolism];


Pssm-ID: 440429 [Multi-domain]  Cd Length: 364  Bit Score: 59.53  E-value: 9.65e-10
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1267287696   5 KKYDAIVVGAGPVGLVAGLSLQKKGISTLVIEGDSFGR--------------PRPGSRAIY-LHSASLKLLEETAEGLG- 68
Cdd:COG0665     1 ATADVVVIGGGIAGLSTAYHLARRGLDVTVLERGRPGSgasgrnagqlrpglAALADRALVrLAREALDLWRELAAELGi 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1267287696  69 -FTLAHNGIIWPvkrtFYKGKEV----YVRDYGKDENLKSNRLP------HFTALHQDEIE-----------------KH 120
Cdd:COG0665    81 dCDFRRTGVLYL----ARTEAELaalrAEAEALRALGLPVELLDaaelreREPGLGSPDYAgglydpddghvdpaklvRA 156

                         170       180       190       200       210
                  ....*....|....*....|....*....|....*....|....*....|.
gi 1267287696 121 MYEACIKAGVEFLWDAPVKKLHITDSEVEVTITNDEILKAQYVIGCDGARS 171
Cdd:COG0665   157 LARAARAAGVRIREGTPVTGLEREGGRVTGVRTERGTVRADAVVLAAGAWS 207
PRK10157 PRK10157
putative oxidoreductase FixC; Provisional
 4-197 1.61e-09

putative oxidoreductase FixC; Provisional


Pssm-ID: 182273 [Multi-domain]  Cd Length: 428  Bit Score: 59.15  E-value: 1.61e-09
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1267287696   4 EKKYDAIVVGAGPVGLVAGLSLQKKGISTLVIE-GDSFGRPRPGSRAIYLHSaslklLEETAEGLGFTLAHNGIIWPVKR 82
Cdd:PRK10157    3 EDIFDAIIVGAGLAGSVAALVLAREGAQVLVIErGNSAGAKNVTGGRLYAHS-----LEHIIPGFADSAPVERLITHEKL 77

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1267287696  83 TFYKGKEVYVRDYGKDENLKSNRLPHftALHQDEIEKHMYEACIKAGVEFLWDAPVKKLHITDSEVEVTITNDEILKAQY 162
Cdd:PRK10157   78 AFMTEKSAMTMDYCNGDETSPSQRSY--SVLRSKFDAWLMEQAEEAGAQLITGIRVDNLVQRDGKVVGVEADGDVIEAKT 155

                         170       180       190
                  ....*....|....*....|....*....|....*
gi 1267287696 163 VIGCDGARSIVREQAGLTfegPRTADTFIVVDAKE 197
Cdd:PRK10157  156 VILADGVNSILAEKLGMA---KRVKPTDVAVGVKE 187
PRK10015 PRK10015
oxidoreductase; Provisional
 4-197 4.11e-09

oxidoreductase; Provisional


Pssm-ID: 182194 [Multi-domain]  Cd Length: 429  Bit Score: 58.06  E-value: 4.11e-09
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1267287696   4 EKKYDAIVVGAGPVGLVAGLSLQKKGISTLVIE-GDSFGRPRPGSRAIYLHSaslklLEETAEGLGFTLAHNGIIWPVKR 82
Cdd:PRK10015    3 DDKFDAIVVGAGVAGSVAALVMARAGLDVLVIErGDSAGCKNMTGGRLYAHT-----LEAIIPGFAASAPVERKVTREKI 77

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1267287696  83 TFYKGKEVYVRDYGKdENLKSNRLPHFTALhQDEIEKHMYEACIKAGVEFLWDAPVKKLHITDSEVEVTITNDEILKAQY 162
Cdd:PRK10015   78 SFLTEESAVTLDFHR-EQPDVPQHASYTVL-RNRLDPWLMEQAEQAGAQFIPGVRVDALVREGNKVTGVQAGDDILEANV 155

                         170       180       190
                  ....*....|....*....|....*....|....*
gi 1267287696 163 VIGCDGARSIVREQAGLTfegPRTADTFIVVDAKE 197
Cdd:PRK10015  156 VILADGVNSMLGRSLGMV---PASDPHHYAVGVKE 187
PRK06185 PRK06185
FAD-dependent oxidoreductase;
1-334 7.08e-09

FAD-dependent oxidoreductase;


Pssm-ID: 235729 [Multi-domain]  Cd Length: 407  Bit Score: 57.18  E-value: 7.08e-09
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1267287696   1 MGKEKKYDAIVVGAGPVGLVAGLSLQKKGISTLVIE----------GDSFgrprpgsraiylHSASLKLLEET--AEGLG 68
Cdd:PRK06185    1 MAEVETTDCCIVGGGPAGMMLGLLLARAGVDVTVLEkhadflrdfrGDTV------------HPSTLELMDELglLERFL 68

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1267287696  69 fTLAHNgiiwPVKR-TFY-KGKEVYVRDYGKdenL---------------------KSNRLPHFTALHQDEIEKHMYEAC 125
Cdd:PRK06185   69 -ELPHQ----KVRTlRFEiGGRTVTLADFSR---LptpypyiammpqwdfldflaeEASAYPNFTLRMGAEVTGLIEEGG 140

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1267287696 126 IKAGVEFlwdapvkklhiTDSEVEVTItndeilKAQYVIGCDGARSIVREQAGLT---FEGPRTADTFiVVDAKEDDTNP 202
Cdd:PRK06185  141 RVTGVRA-----------RTPDGPGEI------RADLVVGADGRHSRVRALAGLEvreFGAPMDVLWF-RLPREPDDPES 202

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1267287696 203 LpLERIFHYQHPAMEGR----NVMFVPFKGGW-RVDLQLLESdnpdDYTNIESVKKWLPKVMDAkyaerITwvssyrfhq 277
Cdd:PRK06185  203 L-MGRFGPGQGLIMIDRgdywQCGYVIPKGGYaALRAAGLEA----FRERVAELAPELADRVAE-----LK--------- 263

                         330       340       350       360       370       380       390
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1267287696 278 vvanSFTDAK---------RR-----ILLAGEAAHLFAPFGARGLNSGIPDAVLAARGIEKALQSNSEEER 334
Cdd:PRK06185  264 ----SWDDVKlldvrvdrlRRwhrpgLLCIGDAAHAMSPVGGVGINLAIQDAVAAANILAEPLRRGRVSDR 330
PRK08849 PRK08849
2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase; Provisional
 5-179 2.50e-08

2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase; Provisional


Pssm-ID: 181564 [Multi-domain]  Cd Length: 384  Bit Score: 55.55  E-value: 2.50e-08
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1267287696   5 KKYDAIVVGAGPVGLVAGLSLQKKGISTLVIEG---DSFGRPRP-GSRAIYLHSASLKLLEEtaegLGftlAHNGI---- 76
Cdd:PRK08849    2 NKYDIAVVGGGMVGAATALGFAKQGRSVAVIEGgepKAFEPSQPmDIRVSAISQTSVDLLES----LG---AWSSIvamr 74

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1267287696  77 IWPVKR-TFYKGKEVYVRDYGKDENLK------SNRLPHFTALHQDEIEKHMYEACikagveflwDAPVKKLHITDSEVE 149
Cdd:PRK08849   75 VCPYKRlETWEHPECRTRFHSDELNLDqlgyivENRLIQLGLWQQFAQYPNLTLMC---------PEKLADLEFSAEGNR 145

                         170       180       190
                  ....*....|....*....|....*....|
gi 1267287696 150 VTITNDEILKAQYVIGCDGARSIVREQAGL 179
Cdd:PRK08849  146 VTLESGAEIEAKWVIGADGANSQVRQLAGI 175
PRK08013 PRK08013
oxidoreductase; Provisional
 7-181 5.21e-08

oxidoreductase; Provisional


Pssm-ID: 236139 [Multi-domain]  Cd Length: 400  Bit Score: 54.67  E-value: 5.21e-08
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1267287696   7 YDAIVVGAGPVGLVAGLSLQKKGISTLVIEGDSFGRPRPGS----RAIYLHSASLKLLEEtaegLGftlahngiIWP--- 79
Cdd:PRK08013    4 VDVVIAGGGMVGLAVACGLQGSGLRVAVLEQRVPEPLAADAppalRVSAINAASEKLLTR----LG--------VWQdil 71

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1267287696  80 VKRTF-YKGKEVYVRD-YGK----DENLKSNRLPHFtalhqdeIEKHMYE------ACIKAGVEFLWDAPVKKLHITDSE 147
Cdd:PRK08013   72 ARRAScYHGMEVWDKDsFGRiafdDQSMGYSHLGHI-------IENSVIHyalwqkAQQSSDITLLAPAELQQVAWGENE 144

                         170       180       190
                  ....*....|....*....|....*....|....*.
gi 1267287696 148 VEVTITNDEILKAQYVIGCDGARSIVREQAG--LTF 181
Cdd:PRK08013  145 AFLTLKDGSMLTARLVVGADGANSWLRNKADipLTF 180
PRK08850 PRK08850
2-octaprenyl-6-methoxyphenol hydroxylase; Validated
 8-385 1.03e-07

2-octaprenyl-6-methoxyphenol hydroxylase; Validated


Pssm-ID: 236341 [Multi-domain]  Cd Length: 405  Bit Score: 53.62  E-value: 1.03e-07
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1267287696   8 DAIVVGAGPVGLVAGLSLQKKGISTLVIEG---DSFGRPRPGSRAIYLHSASLKLLEEtaegLGftlAHNGIIwpvKRTF 84
Cdd:PRK08850    6 DVAIIGGGMVGLALAAALKESDLRIAVIEGqlpEEALNELPDVRVSALSRSSEHILRN----LG---AWQGIE---ARRA 75

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1267287696  85 --YKGKEVYVRD-YGKDEnLKSNRLPHFTALHQDE---IEKHMYEACIKA-GVEFLWDAPVKKLHITDSEVEVTITNDEI 157
Cdd:PRK08850   76 apYIAMEVWEQDsFARIE-FDAESMAQPDLGHIVEnrvIQLALLEQVQKQdNVTLLMPARCQSIAVGESEAWLTLDNGQA 154

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1267287696 158 LKAQYVIGCDGARSIVREQAGLTFEGPRTADTFIVVDAKEDDTNPLPLERIFHYQHPamegrnVMFVPFkggWRVDL-QL 236
Cdd:PRK08850  155 LTAKLVVGADGANSWLRRQMDIPLTHWDYGHSALVANVRTVDPHNSVARQIFTPQGP------LAFLPM---SEPNMsSI 225

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1267287696 237 LESDNPDDYTNI-----ESVKKWLPKVMDAKY------AERITWVSSYRFhqvvANSFtdAKRRILLAGEAAHLFAPFGA 305
Cdd:PRK08850  226 VWSTEPLRAEALlamsdEQFNKALTAEFDNRLglcevvGERQAFPLKMRY----ARDF--VRERVALVGDAAHTIHPLAG 299

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1267287696 306 RGLNSGIPDAVLAARGIeKALQSNSEEerinaIEAAANERRIaAKWNRDASTTALHHLQ-------GNSPEMNMKRDIAA 378
Cdd:PRK08850  300 QGVNLGLLDAASLAQEI-LALWQQGRD-----IGLKRNLRGY-ERWRKAEAAKMIAAMQgfrdlfsGSNPAKKLVRGIGM 372


                  ....*..
gi 1267287696 379 SMVSIVP 385
Cdd:PRK08850  373 SLAGQLP 379
ubiF PRK08020
2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase; Reviewed
 4-179 2.36e-07

2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase; Reviewed


Pssm-ID: 181199 [Multi-domain]  Cd Length: 391  Bit Score: 52.29  E-value: 2.36e-07
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1267287696   4 EKKYDAIVVGAGPVGLVAGLSLQKKGISTLVIEGDSFGRPRPGS----RAIYLHSASLKLLEetaeGLGftlahngiIWP 79
Cdd:PRK08020    3 NQPTDIAIVGGGMVGAALALGLAQHGFSVAVLEHAAPAPFDADSqpdvRISAISAASVALLK----GLG--------VWD 70

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1267287696  80 -VKRTF---YKGKEVY------VRDYGKDENLK------SNRLPHFtALHQdEIEKHmyeacikAGVEFLWDAPVKKLHI 143
Cdd:PRK08020   71 aVQAMRshpYRRLETWewetahVVFDAAELKLPelgymvENRVLQL-ALWQ-ALEAH-------PNVTLRCPASLQALQR 141

                         170       180       190
                  ....*....|....*....|....*....|....*.
gi 1267287696 144 TDSEVEVTITNDEILKAQYVIGCDGARSIVREQAGL 179
Cdd:PRK08020  142 DDDGWELTLADGEEIQAKLVIGADGANSQVRQMAGI 177
PRK07608 PRK07608
UbiH/UbiF family hydroxylase;
6-179 3.42e-07

UbiH/UbiF family hydroxylase;


Pssm-ID: 181057 [Multi-domain]  Cd Length: 388  Bit Score: 51.88  E-value: 3.42e-07
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1267287696   6 KYDAIVVGAGPVGLVAGLSLQKKGISTLVIEGDSFGRPRPG---SRAIYLHSASLKLLEEtaegLGftlahngiIWP--- 79
Cdd:PRK07608    5 KFDVVVVGGGLVGASLALALAQSGLRVALLAPRAPPRPADDawdSRVYAISPSSQAFLER----LG--------VWQald 72

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1267287696  80 VKRTfykgKEVY-VRDYGKDENlksnRLpHFTA-----------LHQDEIEKHMYEACIKAGVEFLWDAPVKKLHITDSE 147
Cdd:PRK07608   73 AARL----APVYdMRVFGDAHA----RL-HFSAyqagvpqlawiVESSLIERALWAALRFQPNLTWFPARAQGLEVDPDA 143

                         170       180       190
                  ....*....|....*....|....*....|..
gi 1267287696 148 VEVTITNDEILKAQYVIGCDGARSIVREQAGL 179
Cdd:PRK07608  144 ATLTLADGQVLRADLVVGADGAHSWVRSQAGI 175
COG1233 COG1233
Phytoene dehydrogenase-related protein [Secondary metabolites biosynthesis, transport and ...
 5-49 9.88e-07

Phytoene dehydrogenase-related protein [Secondary metabolites biosynthesis, transport and catabolism];


Pssm-ID: 440846 [Multi-domain]  Cd Length: 491  Bit Score: 50.62  E-value: 9.88e-07
                          10        20        30        40
                  ....*....|....*....|....*....|....*....|....*
gi 1267287696   5 KKYDAIVVGAGPVGLVAGLSLQKKGISTLVIEgdsfGRPRPGSRA 49
Cdd:COG1233     2 MMYDVVVIGAGIGGLAAAALLARAGYRVTVLE----KNDTPGGRA 42
PRK05868 PRK05868
FAD-binding protein;
8-325 2.80e-06

FAD-binding protein;


Pssm-ID: 180297 [Multi-domain]  Cd Length: 372  Bit Score: 49.21  E-value: 2.80e-06
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1267287696   8 DAIVVGAGPVGLVAGLSLQKKGISTLVIEgdSFGRPRPGSRAIYLHSASLKLLEEtaegLGFTLAHNGiiwpvKRTFYKG 87
Cdd:PRK05868    3 TVVVSGASVAGTAAAYWLGRHGYSVTMVE--RHPGLRPGGQAIDVRGPALDVLER----MGLLAAAQE-----HKTRIRG 71

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1267287696  88 KEVYVRDyGKDENLKSNRLPHFTALHQDEIE------KHMYEACIKAGVEFLWDAPVKKLHITDSEVEVTITNDEILKAQ 161
Cdd:PRK05868   72 ASFVDRD-GNELFRDTESTPTGGPVNSPDIEllrddlVELLYGATQPSVEYLFDDSISTLQDDGDSVRVTFERAAAREFD 150

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1267287696 162 YVIGCDGARSIVREqagLTFeGPRtaDTFI----VVDAKEDDTNPLPLE--RIFHYQHPAMEGrnVMFVPFKGGWRVDLQ 235
Cdd:PRK05868  151 LVIGADGLHSNVRR---LVF-GPE--EQFVkrlgTHAAIFTVPNFLELDywQTWHYGDSTMAG--VYSARNNTEARAALA 222

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1267287696 236 LLESDNPDDYTNIESVKKWLPKVMDAKyaeriTWVSSYRFH--------------QVVANSFtdAKRRILLAGEAAHLFA 301
Cdd:PRK05868  223 FMDTELRIDYRDTEAQFAELQRRMAED-----GWVRAQLLHymrsapdfyfdemsQILMDRW--SRGRVALVGDAGYCCS 295

                         330       340
                  ....*....|....*....|....
gi 1267287696 302 PFGARGLNSGIPDAVLAARGIEKA 325
Cdd:PRK05868  296 PLSGQGTSVALLGAYILAGELKAA 319
TrxB COG0492
Thioredoxin reductase [Posttranslational modification, protein turnover, chaperones];
7-41 4.58e-06

Thioredoxin reductase [Posttranslational modification, protein turnover, chaperones];


Pssm-ID: 440258 [Multi-domain]  Cd Length: 305  Bit Score: 48.19  E-value: 4.58e-06
                          10        20        30
                  ....*....|....*....|....*....|....*
gi 1267287696   7 YDAIVVGAGPVGLVAGLSLQKKGISTLVIEGDSFG 41
Cdd:COG0492     1 YDVVIIGAGPAGLTAAIYAARAGLKTLVIEGGEPG 35
Lpd COG1249
Dihydrolipoamide dehydrogenase (E3) component of pyruvate/2-oxoglutarate dehydrogenase complex ...
 4-173 5.35e-05

Dihydrolipoamide dehydrogenase (E3) component of pyruvate/2-oxoglutarate dehydrogenase complex or glutathione oxidoreductase [Energy production and conversion]; Dihydrolipoamide dehydrogenase (E3) component of pyruvate/2-oxoglutarate dehydrogenase complex or glutathione oxidoreductase is part of the Pathway/BioSystem: Glycine cleavagePyruvate oxidation


Pssm-ID: 440861 [Multi-domain]  Cd Length: 456  Bit Score: 45.08  E-value: 5.35e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1267287696   4 EKKYDAIVVGAGPVGLVAGLSLQKKGISTLVIEGDSFGrprpG---------SRAiYLHSASLKLLEETAEGLGFTLAHN 74
Cdd:COG1249     1 MKDYDLVVIGAGPGGYVAAIRAAQLGLKVALVEKGRLG----GtclnvgcipSKA-LLHAAEVAHEARHAAEFGISAGAP 75

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1267287696  75 GIIWPVkrtfykgkevyVRDYgKDEnlksnrlphftalHQDEIEKHMYEACIKAGVEFLWDAPvkklHITDSEvEVTITN 154
Cdd:COG1249    76 SVDWAA-----------LMAR-KDK-------------VVDRLRGGVEELLKKNGVDVIRGRA----RFVDPH-TVEVTG 125

                         170
                  ....*....|....*....
gi 1267287696 155 DEILKAQYVIGCDGARSIV 173
Cdd:COG1249   126 GETLTADHIVIATGSRPRV 144
PRK08163 PRK08163
3-hydroxybenzoate 6-monooxygenase;
9-176 5.98e-05

3-hydroxybenzoate 6-monooxygenase;


Pssm-ID: 181262 [Multi-domain]  Cd Length: 396  Bit Score: 45.03  E-value: 5.98e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1267287696   9 AIVVGAGPVGLVAGLSLQKKGIStlviegdsfgrprpgsraiylhsasLKLLEETAE----GLGFTLAHNGI-------I 77
Cdd:PRK08163    7 VLIVGGGIGGLAAALALARQGIK-------------------------VKLLEQAAEigeiGAGIQLGPNAFsaldalgV 61

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1267287696  78 WPVKRtfykGKEVYVRDYGKDENLKSN---RLP-------HF----TALHQDEIEKHMYEACIKAG-VEFLWDAPVKKLH 142
Cdd:PRK08163   62 GEAAR----QRAVFTDHLTMMDAVDAEevvRIPtgqafraRFgnpyAVIHRADIHLSLLEAVLDHPlVEFRTSTHVVGIE 137

                         170       180       190
                  ....*....|....*....|....*....|....
gi 1267287696 143 ITDSEVEVTITNDEILKAQYVIGCDGARSIVREQ 176
Cdd:PRK08163  138 QDGDGVTVFDQQGNRWTGDALIGCDGVKSVVRQS 171
DAO pfam01266
FAD dependent oxidoreductase; This family includes various FAD dependent oxidoreductases: ...
 8-153 7.22e-05

FAD dependent oxidoreductase; This family includes various FAD dependent oxidoreductases: Glycerol-3-phosphate dehydrogenase EC:1.1.99.5, Sarcosine oxidase beta subunit EC:1.5.3.1, D-alanine oxidase EC:1.4.99.1, D-aspartate oxidase EC:1.4.3.1.


Pssm-ID: 426168 [Multi-domain]  Cd Length: 339  Bit Score: 44.31  E-value: 7.22e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1267287696   8 DAIVVGAGPVGLVAGLSLQKKGISTLVIEGDSFG----------------RPRPGSRAIYLHSASLKLLEETAEGLGFTL 71
Cdd:pfam01266   1 DVVVIGGGIVGLSTAYELARRGLSVTLLERGDDPgsgasgrnaglihpglRYLEPSELARLALEALDLWEELEEELGIDC 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1267287696  72 AH--NGIIWpvkrTFYKGKEVYVRDYGKDENLKSNRLPHFTALHQDEIE------------------------KHMYEAC 125
Cdd:pfam01266  81 GFrrCGVLV----LARDEEEEALEKLLAALRRLGVPAELLDAEELRELEpllpglrgglfypdgghvdparllRALARAA 156

                         170       180
                  ....*....|....*....|....*...
gi 1267287696 126 IKAGVEFLWDAPVKKLHITDSEVEVTIT 153
Cdd:pfam01266 157 EALGVRIIEGTEVTGIEEEGGVWGVVTT 184
PRK06292 PRK06292
dihydrolipoamide dehydrogenase; Validated
 5-41 1.51e-04

dihydrolipoamide dehydrogenase; Validated


Pssm-ID: 235774 [Multi-domain]  Cd Length: 460  Bit Score: 43.63  E-value: 1.51e-04
                          10        20        30
                  ....*....|....*....|....*....|....*..
gi 1267287696   5 KKYDAIVVGAGPVGLVAGLSLQKKGISTLVIEGDSFG 41
Cdd:PRK06292    2 EKYDVIVIGAGPAGYVAARRAAKLGKKVALIEKGPLG 38
PRK05732 PRK05732
2-octaprenyl-6-methoxyphenyl hydroxylase; Validated
 5-179 1.56e-04

2-octaprenyl-6-methoxyphenyl hydroxylase; Validated


Pssm-ID: 235584 [Multi-domain]  Cd Length: 395  Bit Score: 43.69  E-value: 1.56e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1267287696   5 KKYDAIVVGAGPVGLVAGLSLQ---KKGISTLVIEGDSFG-RPRPG--SRAIYLHSASLKLLEetAEGLGFTLAHNGIiw 78
Cdd:PRK05732    2 SRMDVIIVGGGMAGATLALALSrlsHGGLPVALIEAFAPEsDAHPGfdARAIALAAGTCQQLA--RLGVWQALADCAT-- 77

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1267287696  79 PVKRtfykgkeVYVRDYGkdenlksnrlpHF--TALHQDE---------IEKH----MYEACIKAGVEFLWDAPVKKLHI 143
Cdd:PRK05732   78 PITH-------IHVSDRG-----------HAgfVRLDAEDygvpalgyvVELHdvgqRLFALLDKAPGVTLHCPARVANV 139

                         170       180       190
                  ....*....|....*....|....*....|....*...
gi 1267287696 144 --TDSEVEVTITNDEILKAQYVIGCDGARSIVREQAGL 179
Cdd:PRK05732  140 erTQGSVRVTLDDGETLTGRLLVAADGSHSALREALGI 177
SdhA COG1053
Succinate dehydrogenase/fumarate reductase, flavoprotein subunit [Energy production and ...
 4-42 1.68e-04

Succinate dehydrogenase/fumarate reductase, flavoprotein subunit [Energy production and conversion]; Succinate dehydrogenase/fumarate reductase, flavoprotein subunit is part of the Pathway/BioSystem: TCA cycle


Pssm-ID: 440673 [Multi-domain]  Cd Length: 443  Bit Score: 43.67  E-value: 1.68e-04
                          10        20        30
                  ....*....|....*....|....*....|....*....
gi 1267287696   4 EKKYDAIVVGAGPVGLVAGLSLQKKGISTLVIEGDSFGR 42
Cdd:COG1053     1 DHEYDVVVVGSGGAGLRAALEAAEAGLKVLVLEKVPPRG 39
PLN02976 PLN02976
amine oxidase
 10-57 2.43e-04

amine oxidase


Pssm-ID: 215527 [Multi-domain]  Cd Length: 1713  Bit Score: 43.70  E-value: 2.43e-04
                           10        20        30        40
                   ....*....|....*....|....*....|....*....|....*...
gi 1267287696   10 IVVGAGPVGLVAGLSLQKKGISTLVIEgdsfGRPRPGSRaIYLHSASL 57
Cdd:PLN02976   697 IVVGAGPAGLTAARHLQRQGFSVTVLE----ARSRIGGR-VYTDRSSL 739
YobN COG1231
Monoamine oxidase [Amino acid transport and metabolism];
5-49 2.84e-04

Monoamine oxidase [Amino acid transport and metabolism];


Pssm-ID: 440844 [Multi-domain]  Cd Length: 440  Bit Score: 42.99  E-value: 2.84e-04
                          10        20        30        40
                  ....*....|....*....|....*....|....*....|....*
gi 1267287696   5 KKYDAIVVGAGPVGLVAGLSLQKKGISTLVIEgdsfGRPRPGSRA 49
Cdd:COG1231     6 RGKDVVIVGAGLAGLAAARELRKAGLDVTVLE----ARDRVGGRV 46
Lycopene_cycl pfam05834
Lycopene cyclase protein; This family consists of lycopene beta and epsilon cyclase proteins. ...
 8-174 2.87e-04

Lycopene cyclase protein; This family consists of lycopene beta and epsilon cyclase proteins. Carotenoids with cyclic end groups are essential components of the photosynthetic membranes in all plants, algae, and cyanobacteria. These lipid-soluble compounds protect against photo-oxidation, harvest light for photosynthesis, and dissipate excess light energy absorbed by the antenna pigments. The cyclization of lycopene (psi, psi-carotene) is a key branch point in the pathway of carotenoid biosynthesis. Two types of cyclic end groups are found in higher plant carotenoids: the beta and epsilon rings. Carotenoids with two beta rings are ubiquitous, and those with one beta and one epsilon ring are common; however, carotenoids with two epsilon rings are rare.


Pssm-ID: 310433 [Multi-domain]  Cd Length: 380  Bit Score: 42.79  E-value: 2.87e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1267287696   8 DAIVVGAGPVGL--VAGLSLQKKGISTLVIEGdSFGRPRPGSRAIYLHSASLKLLEETAEGLgftlahngiiWPVKRT-F 84
Cdd:pfam05834   1 DVVIIGAGPAGLslAARLAAAKPGLSVVLIEP-GPSLLRPNNYVWSDEFEDLGALEDCVGHS----------WPGTRVhF 69

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1267287696  85 YKGKEVYV-RDYGKdenlksnrlphftaLHQDEIEKHMYEACIKAGVEFLwDAPVKKL-HITDSEVEVTITNDEILKAQY 162
Cdd:pfam05834  70 DDGKPILIgRAYGR--------------VSSKRLEEEMLQRCVENGVIRL-NAKVESVeADPVGESLVVCEGGRTIRARL 134

                         170
                  ....*....|..
gi 1267287696 163 VIGCDGARSIVR 174
Cdd:pfam05834 135 VFDARGLGSLPP 146
HI0933_like pfam03486
HI0933-like protein;
7-42 3.46e-04

HI0933-like protein;


Pssm-ID: 427330 [Multi-domain]  Cd Length: 406  Bit Score: 42.57  E-value: 3.46e-04
                          10        20        30
                  ....*....|....*....|....*....|....*..
gi 1267287696   7 YDAIVVGAGPVGLVAGLSLQKKGISTLVIE-GDSFGR 42
Cdd:pfam03486   1 FDVIVIGGGAAGLMAAISAAKRGRRVLLIEkGKKLGR 37
PRK07843 PRK07843
3-oxosteroid 1-dehydrogenase;
7-36 6.78e-04

3-oxosteroid 1-dehydrogenase;


Pssm-ID: 236111 [Multi-domain]  Cd Length: 557  Bit Score: 41.94  E-value: 6.78e-04
                          10        20        30
                  ....*....|....*....|....*....|
gi 1267287696   7 YDAIVVGAGPVGLVAGLSLQKKGISTLVIE 36
Cdd:PRK07843    8 YDVVVVGSGAAGMVAALTAAHRGLSTVVVE 37
CzcO COG2072
Predicted flavoprotein CzcO associated with the cation diffusion facilitator CzcD [Inorganic ...
 7-41 7.00e-04

Predicted flavoprotein CzcO associated with the cation diffusion facilitator CzcD [Inorganic ion transport and metabolism];


Pssm-ID: 441675 [Multi-domain]  Cd Length: 414  Bit Score: 41.39  E-value: 7.00e-04
                          10        20        30
                  ....*....|....*....|....*....|....*.
gi 1267287696   7 YDAIVVGAGPVGLVAGLSLQKKGISTLVIE-GDSFG 41
Cdd:COG2072     7 VDVVVIGAGQAGLAAAYHLRRAGIDFVVLEkADDVG 42
FAD_binding_2 pfam00890
FAD binding domain; This family includes members that bind FAD. This family includes the ...
 8-148 7.01e-04

FAD binding domain; This family includes members that bind FAD. This family includes the flavoprotein subunits from succinate and fumarate dehydrogenase, aspartate oxidase and the alpha subunit of adenylylsulphate reductase.


Pssm-ID: 395718 [Multi-domain]  Cd Length: 398  Bit Score: 41.50  E-value: 7.01e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1267287696   8 DAIVVGAGPVGLVAGLSLQKKGISTLVIEG---------------DSFGRP---------------RPGSRAIYLHSASL 57
Cdd:pfam00890   1 DVLVIGGGLAGLAAALAAAEAGLKVAVVEKgqpfggatawssggiDALGNPpqggidspelhptdtLKGLDELADHPYVE 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1267287696  58 KLLEETAEGLGFtLAHNGIiwPVKRTfyKGKEVYVRDYGKDenLKSNRLPHFTALHQ------DEIEKHMYEACIKAGVE 131
Cdd:pfam00890  81 AFVEAAPEAVDW-LEALGV--PFSRT--EDGHLDLRPLGGL--SATWRTPHDAADRRrglgtgHALLARLLEGLRKAGVD 153

                         170
                  ....*....|....*..
gi 1267287696 132 FLWDAPVKKLHITDSEV 148
Cdd:pfam00890 154 FQPRTAADDLIVEDGRV 170
NAD_binding_8 pfam13450
NAD(P)-binding Rossmann-like domain;
11-56 1.11e-03

NAD(P)-binding Rossmann-like domain;


Pssm-ID: 433218 [Multi-domain]  Cd Length: 67  Bit Score: 37.13  E-value: 1.11e-03
                          10        20        30        40        50
                  ....*....|....*....|....*....|....*....|....*....|....*.
gi 1267287696  11 VVGAGPVGLVAGLSLQKKGISTLVIE------GDSFGRPRPGSR----AIYLHSAS 56
Cdd:pfam13450   1 IVGAGLAGLVAAALLAKRGFRVLVLEkrdrlgGNAYSYRVPGYVfdygAHIFHGSD 56
HemY COG1232
Protoporphyrinogen oxidase HemY/PPOX [Coenzyme transport and metabolism]; Protoporphyrinogen ...
 6-46 1.13e-03

Protoporphyrinogen oxidase HemY/PPOX [Coenzyme transport and metabolism]; Protoporphyrinogen oxidase HemY/PPOX is part of the Pathway/BioSystem: Heme biosynthesis


Pssm-ID: 440845 [Multi-domain]  Cd Length: 443  Bit Score: 40.97  E-value: 1.13e-03
                          10        20        30        40
                  ....*....|....*....|....*....|....*....|.
gi 1267287696   6 KYDAIVVGAGPVGLVAGLSLQKKGISTLVIEGDsfgrPRPG 46
Cdd:COG1232     1 MKRVAVIGGGIAGLTAAYRLAKAGHEVTVLEAS----DRVG 37
Pyr_redox_2 pfam07992
Pyridine nucleotide-disulphide oxidoreductase; This family includes both class I and class II ...
 87-195 1.27e-03

Pyridine nucleotide-disulphide oxidoreductase; This family includes both class I and class II oxidoreductases and also NADH oxidases and peroxidases. This domain is actually a small NADH binding domain within a larger FAD binding domain.


Pssm-ID: 400379 [Multi-domain]  Cd Length: 301  Bit Score: 40.38  E-value: 1.27e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1267287696  87 GKEVYVRDygkdenlksnRLPHFTALHQDEIEKHMYEACIKAGVEFLWDAPVKKLHITDSEVEVTITNDEILKAQYVIGC 166
Cdd:pfam07992 175 GKEVTLIE----------ALDRLLRAFDEEISAALEKALEKNGVEVRLGTSVKEIIGDGDGVEVILKDGTEIDADLVVVA 244

                          90       100       110
                  ....*....|....*....|....*....|.
gi 1267287696 167 DGAR--SIVREQAGLtfegPRTADTFIVVDA 195
Cdd:pfam07992 245 IGRRpnTELLEAAGL----ELDERGGIVVDE 271
PRK12844 PRK12844
3-ketosteroid-delta-1-dehydrogenase; Reviewed
 7-36 1.42e-03

3-ketosteroid-delta-1-dehydrogenase; Reviewed


Pssm-ID: 183787 [Multi-domain]  Cd Length: 557  Bit Score: 40.89  E-value: 1.42e-03
                          10        20        30
                  ....*....|....*....|....*....|
gi 1267287696   7 YDAIVVGAGPVGLVAGLSLQKKGISTLVIE 36
Cdd:PRK12844    7 YDVVVVGSGGGGMCAALAAADSGLEPLIVE 36
PRK05329 PRK05329
glycerol-3-phosphate dehydrogenase subunit GlpB;
5-66 2.23e-03

glycerol-3-phosphate dehydrogenase subunit GlpB;


Pssm-ID: 235412  Cd Length: 422  Bit Score: 39.83  E-value: 2.23e-03
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1267287696   5 KKYDAIVVGAGPVGLVAGLSLQKKGISTLVIEGdsfgrprpGSRAIYLHSASLKLLEETAEG 66
Cdd:PRK05329    1 MKFDVLVIGGGLAGLTAALAAAEAGKRVALVAK--------GQGALHFSSGSIDLLGYLPDG 54
PTZ00139 PTZ00139
Succinate dehydrogenase [ubiquinone] flavoprotein subunit; Provisional
 4-35 4.73e-03

Succinate dehydrogenase [ubiquinone] flavoprotein subunit; Provisional


Pssm-ID: 240286 [Multi-domain]  Cd Length: 617  Bit Score: 39.34  E-value: 4.73e-03
                          10        20        30
                  ....*....|....*....|....*....|..
gi 1267287696   4 EKKYDAIVVGAGPVGLVAGLSLQKKGISTLVI 35
Cdd:PTZ00139   27 DHTYDAVVVGAGGAGLRAALGLVELGYKTACI 58
PRK07208 PRK07208
hypothetical protein; Provisional
 8-39 6.10e-03

hypothetical protein; Provisional


Pssm-ID: 235967 [Multi-domain]  Cd Length: 479  Bit Score: 38.72  E-value: 6.10e-03
                          10        20        30
                  ....*....|....*....|....*....|..
gi 1267287696   8 DAIVVGAGPVGLVAGLSLQKKGISTLVIEGDS 39
Cdd:PRK07208    6 SVVIIGAGPAGLTAAYELLKRGYPVTVLEADP 37
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
Help | Disclaimer | Write to the Help Desk
NCBI | NLM | NIH