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Conserved domains on  [gi|1267807888|ref|WP_098548789|]
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MULTISPECIES: IDEAL domain-containing protein [Priestia]

Protein Classification

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
PRK03636 super family cl35216
hypothetical protein; Provisional
 18-65 1.79e-07

hypothetical protein; Provisional


The actual alignment was detected with superfamily member PRK03636:

Pssm-ID: 235145 [Multi-domain]  Cd Length: 179  Bit Score: 44.96  E-value: 1.79e-07
                          10        20        30        40
                  ....*....|....*....|....*....|....*....|....*...
gi 1267807888  18 DEMLAELFLDQMVSDFKRSKILEEIDQSLKIKDKEAFLLLTEKLKSVS 65
Cdd:PRK03636  130 DRLLAEQFLEQSVFQFRREKLLKQIDEALDRRDKEAFHRLSDELNQLR 177
 
Name Accession Description Interval E-value
PRK03636 PRK03636
hypothetical protein; Provisional
 18-65 1.79e-07

hypothetical protein; Provisional


Pssm-ID: 235145 [Multi-domain]  Cd Length: 179  Bit Score: 44.96  E-value: 1.79e-07
                          10        20        30        40
                  ....*....|....*....|....*....|....*....|....*...
gi 1267807888  18 DEMLAELFLDQMVSDFKRSKILEEIDQSLKIKDKEAFLLLTEKLKSVS 65
Cdd:PRK03636  130 DRLLAEQFLEQSVFQFRREKLLKQIDEALDRRDKEAFHRLSDELNQLR 177
YpiB COG5582
Uncharacterized conserved protein YpiB, UPF0302 family [Function unknown];
18-62 4.97e-07

Uncharacterized conserved protein YpiB, UPF0302 family [Function unknown];


Pssm-ID: 444321 [Multi-domain]  Cd Length: 180  Bit Score: 43.73  E-value: 4.97e-07
                          10        20        30        40
                  ....*....|....*....|....*....|....*....|....*
gi 1267807888  18 DEMLAELFLDQMVSDFKRSKILEEIDQSLKIKDKEAFLLLTEKLK 62
Cdd:COG5582   132 DKLLAEQLLDESLREFQREKLLKQIDEALDTGDKERFYELTEELN 176
IDEAL pfam08858
IDEAL domain; This short domain is found at the C-terminus of proteins in the UPF0302 family. ...
 26-61 7.14e-05

IDEAL domain; This short domain is found at the C-terminus of proteins in the UPF0302 family. The domain is named after the sequence of the most conserved region in some members. The function of this domain is unknown.


Pssm-ID: 430265 [Multi-domain]  Cd Length: 36  Bit Score: 35.81  E-value: 7.14e-05
                         10        20        30
                 ....*....|....*....|....*....|....*.
gi 1267807888 26 LDQMVSDFKRSKILEEIDQSLKIKDKEAFLLLTEKL 61
Cdd:pfam08858  1 LDESLRKFRREKLLEEIDEALDNRDKEAFLELTEEL 36
IDEAL smart00914
A short protein domain of unknown function; It is found at the C-terminus of proteins in the ...
 25-61 6.02e-03

A short protein domain of unknown function; It is found at the C-terminus of proteins in the UPF0302 family. It is named after the sequence of the most conserved region in some members.


Pssm-ID: 197982 [Multi-domain]  Cd Length: 37  Bit Score: 30.84  E-value: 6.02e-03
                          10        20        30
                  ....*....|....*....|....*....|....*..
gi 1267807888  25 FLDQMVSDFKRSKILEEIDQSLKIKDKEAFLLLTEKL 61
Cdd:smart00914  1 VLDESLFTFRKEKLLELIDEALDNKDKELFYKLTEEL 37
 
Name Accession Description Interval E-value
PRK03636 PRK03636
hypothetical protein; Provisional
 18-65 1.79e-07

hypothetical protein; Provisional


Pssm-ID: 235145 [Multi-domain]  Cd Length: 179  Bit Score: 44.96  E-value: 1.79e-07
                          10        20        30        40
                  ....*....|....*....|....*....|....*....|....*...
gi 1267807888  18 DEMLAELFLDQMVSDFKRSKILEEIDQSLKIKDKEAFLLLTEKLKSVS 65
Cdd:PRK03636  130 DRLLAEQFLEQSVFQFRREKLLKQIDEALDRRDKEAFHRLSDELNQLR 177
YpiB COG5582
Uncharacterized conserved protein YpiB, UPF0302 family [Function unknown];
18-62 4.97e-07

Uncharacterized conserved protein YpiB, UPF0302 family [Function unknown];


Pssm-ID: 444321 [Multi-domain]  Cd Length: 180  Bit Score: 43.73  E-value: 4.97e-07
                          10        20        30        40
                  ....*....|....*....|....*....|....*....|....*
gi 1267807888  18 DEMLAELFLDQMVSDFKRSKILEEIDQSLKIKDKEAFLLLTEKLK 62
Cdd:COG5582   132 DKLLAEQLLDESLREFQREKLLKQIDEALDTGDKERFYELTEELN 176
IDEAL pfam08858
IDEAL domain; This short domain is found at the C-terminus of proteins in the UPF0302 family. ...
 26-61 7.14e-05

IDEAL domain; This short domain is found at the C-terminus of proteins in the UPF0302 family. The domain is named after the sequence of the most conserved region in some members. The function of this domain is unknown.


Pssm-ID: 430265 [Multi-domain]  Cd Length: 36  Bit Score: 35.81  E-value: 7.14e-05
                         10        20        30
                 ....*....|....*....|....*....|....*.
gi 1267807888 26 LDQMVSDFKRSKILEEIDQSLKIKDKEAFLLLTEKL 61
Cdd:pfam08858  1 LDESLRKFRREKLLEEIDEALDNRDKEAFLELTEEL 36
IDEAL smart00914
A short protein domain of unknown function; It is found at the C-terminus of proteins in the ...
 25-61 6.02e-03

A short protein domain of unknown function; It is found at the C-terminus of proteins in the UPF0302 family. It is named after the sequence of the most conserved region in some members.


Pssm-ID: 197982 [Multi-domain]  Cd Length: 37  Bit Score: 30.84  E-value: 6.02e-03
                          10        20        30
                  ....*....|....*....|....*....|....*..
gi 1267807888  25 FLDQMVSDFKRSKILEEIDQSLKIKDKEAFLLLTEKL 61
Cdd:smart00914  1 VLDESLFTFRKEKLLELIDEALDNKDKELFYKLTEEL 37
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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