MULTISPECIES: DUF739 family protein [Clostridium]
helix-turn-helix domain-containing protein( domain architecture ID 366238)
helix-turn-helix (HTH) domain-containing protein with an XRE (Xenobiotic Response Element) family; HTH domain binds DNA and may function as a transcriptional regulator
List of domain hits
Name | Accession | Description | Interval | E-value | ||
HTH_XRE super family | cl22854 | Helix-turn-helix XRE-family like proteins. Prokaryotic DNA binding proteins belonging to the ... |
1-67 | 2.35e-22 | ||
Helix-turn-helix XRE-family like proteins. Prokaryotic DNA binding proteins belonging to the xenobiotic response element family of transcriptional regulators. The actual alignment was detected with superfamily member pfam05339: Pssm-ID: 473980 Cd Length: 68 Bit Score: 81.04 E-value: 2.35e-22
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Name | Accession | Description | Interval | E-value | ||
DUF739 | pfam05339 | Protein of unknown function (DUF739); This family contains several bacteriophage proteins. ... |
1-67 | 2.35e-22 | ||
Protein of unknown function (DUF739); This family contains several bacteriophage proteins. Some of the proteins in this family have been labeled putative cro repressor proteins. Pssm-ID: 428429 Cd Length: 68 Bit Score: 81.04 E-value: 2.35e-22
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XRE | COG1476 | DNA-binding transcriptional regulator, XRE-family HTH domain [Transcription]; |
19-62 | 3.17e-03 | ||
DNA-binding transcriptional regulator, XRE-family HTH domain [Transcription]; Pssm-ID: 441085 [Multi-domain] Cd Length: 68 Bit Score: 32.51 E-value: 3.17e-03
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Name | Accession | Description | Interval | E-value | ||
DUF739 | pfam05339 | Protein of unknown function (DUF739); This family contains several bacteriophage proteins. ... |
1-67 | 2.35e-22 | ||
Protein of unknown function (DUF739); This family contains several bacteriophage proteins. Some of the proteins in this family have been labeled putative cro repressor proteins. Pssm-ID: 428429 Cd Length: 68 Bit Score: 81.04 E-value: 2.35e-22
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XRE | COG1476 | DNA-binding transcriptional regulator, XRE-family HTH domain [Transcription]; |
19-62 | 3.17e-03 | ||
DNA-binding transcriptional regulator, XRE-family HTH domain [Transcription]; Pssm-ID: 441085 [Multi-domain] Cd Length: 68 Bit Score: 32.51 E-value: 3.17e-03
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VapI | COG3093 | Plasmid maintenance system antidote protein VapI, contains XRE-type HTH domain [Defense ... |
19-57 | 6.47e-03 | ||
Plasmid maintenance system antidote protein VapI, contains XRE-type HTH domain [Defense mechanisms]; Pssm-ID: 442327 [Multi-domain] Cd Length: 87 Bit Score: 32.09 E-value: 6.47e-03
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Blast search parameters | ||||
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