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Conserved domains on  [gi|1293418642|ref|WP_100676452|]
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MULTISPECIES: aromatic acid/H+ symport family MFS transporter [Klebsiella]

Protein Classification

MFS transporter( domain architecture ID 13024277)

major facilitator superfamily (MFS) transporter facilitates the transport across cytoplasmic or internal membranes of one or more from a variety of substrates including ions, sugar phosphates, drugs, neurotransmitters, nucleosides, amino acids, and peptides

CATH:  1.20.1250.20
Gene Ontology:  GO:0016020|GO:0055085|GO:0022857
SCOP:  3000310
TCDB:  2.A.1

Graphical summary

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List of domain hits

Name Accession Description Interval E-value
MFS_PcaK_like cd17365
4-hydroxybenzoate transporter PcaK and similar transporters of the Major Facilitator ...
26-436 1.35e-128

4-hydroxybenzoate transporter PcaK and similar transporters of the Major Facilitator Superfamily; This aromatic acid:H(+) symporter subfamily includes Acinetobacter sp. 4-hydroxybenzoate transporter PcaK, Pseudomonas putida gallate transporter (GalT), Corynebacterium glutamicum gentisate transporter (GenK), Nocardioides sp. 1-hydroxy-2-naphthoate transporter (PhdT), Escherichia coli 3-(3-hydroxy-phenyl)propionate (3HPP) transporter (MhpT), and similar proteins. These transporters are involved in the uptake across the cytoplasmic membrane of specific aromatic compounds such as 4-hydroxybenzoate, gallate, gentisate (2,5-dihydroxybenzoate), 1-hydroxy-2-naphthoate, and 3HPP, respectively. The PcaK-like aromatic acid:H(+) symporter subfamily belongs to the Metazoan Synaptic Vesicle Glycoprotein 2 (SV2) and related small molecule transporter family (SV2-like) of the Major Facilitator Superfamily (MFS) of membrane transport proteins. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


:

Pssm-ID: 340923 [Multi-domain]  Cd Length: 351  Bit Score: 376.16  E-value: 1.35e-128
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1293418642  26 LLLCFIIIMLDGYDAAVMGFVAPALIEDWGISRAEMGPILGAAMFGVAIGALVAGPLSDRYGRKRILLWSVALFALFSLA 105
Cdd:cd17365     1 LALCFLIIVLDGFDLAVMGFVAPALAQDWGLSPAQLGPVGSAALFGMAIGALLAGPLADRFGRKRVLLVSVALFGLFTLL 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1293418642 106 GAVAQSPSQLALMRFLTGLGLGAVMPNCVTLVAEYMPERRKGVMITLMYSGFNVGSGLGGFIAAGLLSHYSWHSALIFGG 185
Cdd:cd17365    81 TAFAQSVLQLALLRFLTGLGLGAAMPNAITLVSEYAPARRRSLAVTLMFCGYPLGAALGGFLAAALIPAFGWRSVFLLGG 160
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1293418642 186 VLPLVVLPFMivmlpesamnmvarrlpgeqiaralnrlggqftaetvfqlnappitrsskvaqlfrhgyaRGTIALWLTY 265
Cdd:cd17365   161 VPPLILLPLL------------------------------------------------------------RGTLLLWVTF 180
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1293418642 266 FMGLFVIYLLNGWLPTILRSGGLSLQQAAMMTGLFQLGGPLGGILVGMLMDRASAKAVIAATYFLGCLCLLSQGLMDFGS 345
Cdd:cd17365   181 FMGLLLVYLLNSWLPKLMVEAGYSLSQALTITLLLNIGGVIGSLLLGWLADRFGPKRVLALFFALGAVSLALLGVSPASL 260
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1293418642 346 AALSVLIFISGMCINGAQNGLQAYSPAYYQTEIRATGVSWMHGIGRTGAILSSTLGGMLMLAVPGHSSIFLVLGLPACLA 425
Cdd:cd17365   261 VLLYVLVFLAGACVNGAQVGLYALAARFYPTEVRATGVGWALGVGRLGAILGPLLGGLLLAAGLGPESVFLALAIPAALG 340
                         410
                  ....*....|.
gi 1293418642 426 GICILLHRMNH 436
Cdd:cd17365   341 ALAVLLLRLRR 351
 
Name Accession Description Interval E-value
MFS_PcaK_like cd17365
4-hydroxybenzoate transporter PcaK and similar transporters of the Major Facilitator ...
26-436 1.35e-128

4-hydroxybenzoate transporter PcaK and similar transporters of the Major Facilitator Superfamily; This aromatic acid:H(+) symporter subfamily includes Acinetobacter sp. 4-hydroxybenzoate transporter PcaK, Pseudomonas putida gallate transporter (GalT), Corynebacterium glutamicum gentisate transporter (GenK), Nocardioides sp. 1-hydroxy-2-naphthoate transporter (PhdT), Escherichia coli 3-(3-hydroxy-phenyl)propionate (3HPP) transporter (MhpT), and similar proteins. These transporters are involved in the uptake across the cytoplasmic membrane of specific aromatic compounds such as 4-hydroxybenzoate, gallate, gentisate (2,5-dihydroxybenzoate), 1-hydroxy-2-naphthoate, and 3HPP, respectively. The PcaK-like aromatic acid:H(+) symporter subfamily belongs to the Metazoan Synaptic Vesicle Glycoprotein 2 (SV2) and related small molecule transporter family (SV2-like) of the Major Facilitator Superfamily (MFS) of membrane transport proteins. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340923 [Multi-domain]  Cd Length: 351  Bit Score: 376.16  E-value: 1.35e-128
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1293418642  26 LLLCFIIIMLDGYDAAVMGFVAPALIEDWGISRAEMGPILGAAMFGVAIGALVAGPLSDRYGRKRILLWSVALFALFSLA 105
Cdd:cd17365     1 LALCFLIIVLDGFDLAVMGFVAPALAQDWGLSPAQLGPVGSAALFGMAIGALLAGPLADRFGRKRVLLVSVALFGLFTLL 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1293418642 106 GAVAQSPSQLALMRFLTGLGLGAVMPNCVTLVAEYMPERRKGVMITLMYSGFNVGSGLGGFIAAGLLSHYSWHSALIFGG 185
Cdd:cd17365    81 TAFAQSVLQLALLRFLTGLGLGAAMPNAITLVSEYAPARRRSLAVTLMFCGYPLGAALGGFLAAALIPAFGWRSVFLLGG 160
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1293418642 186 VLPLVVLPFMivmlpesamnmvarrlpgeqiaralnrlggqftaetvfqlnappitrsskvaqlfrhgyaRGTIALWLTY 265
Cdd:cd17365   161 VPPLILLPLL------------------------------------------------------------RGTLLLWVTF 180
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1293418642 266 FMGLFVIYLLNGWLPTILRSGGLSLQQAAMMTGLFQLGGPLGGILVGMLMDRASAKAVIAATYFLGCLCLLSQGLMDFGS 345
Cdd:cd17365   181 FMGLLLVYLLNSWLPKLMVEAGYSLSQALTITLLLNIGGVIGSLLLGWLADRFGPKRVLALFFALGAVSLALLGVSPASL 260
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1293418642 346 AALSVLIFISGMCINGAQNGLQAYSPAYYQTEIRATGVSWMHGIGRTGAILSSTLGGMLMLAVPGHSSIFLVLGLPACLA 425
Cdd:cd17365   261 VLLYVLVFLAGACVNGAQVGLYALAARFYPTEVRATGVGWALGVGRLGAILGPLLGGLLLAAGLGPESVFLALAIPAALG 340
                         410
                  ....*....|.
gi 1293418642 426 GICILLHRMNH 436
Cdd:cd17365   341 ALAVLLLRLRR 351
2A0115 TIGR00895
benzoate transport; [Transport and binding proteins, Carbohydrates, organic alcohols, and ...
8-405 1.98e-112

benzoate transport; [Transport and binding proteins, Carbohydrates, organic alcohols, and acids]


Pssm-ID: 273327 [Multi-domain]  Cd Length: 398  Bit Score: 336.64  E-value: 1.98e-112
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1293418642   8 DVKAWIDARPVSRFQWNVLLLCFIIIMLDGYDAAVMGFVAPALIEDWGISRAEMGPILGAAMFGVAIGALVAGPLSDRYG 87
Cdd:TIGR00895   1 DVQNNIRKQPLSRYQWRAIILSFLIMLMDGYDLAAMGFAAPAISAEWGLDPVQLGFLFSAGLIGMAFGALFFGPLADRIG 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1293418642  88 RKRILLWSVALFALFSLAGAVAQSPSQLALMRFLTGLGLGAVMPNCVTLVAEYMPERRKGVMITLMYSGFNVGSGLGGFI 167
Cdd:TIGR00895  81 RRRVLLWSILLFSVFTLLCALATNVTQLLILRFLAGLGLGGLMPNLNALVSEYAPKRFRGTAVGLMFCGYPIGAAVGGFL 160
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1293418642 168 AAGLLSHYSWHSALIFGGVLPLVVLPFMIVMLPESAMNMVARRlpGEQIARALNRLGGQFTAETVFQLNAPPI---TRSS 244
Cdd:TIGR00895 161 AGWLIPVFGWRSLFYVGGIAPLLLLLLLMRFLPESIDFLVSKR--PETVRRIVNAIAPQMQAEAQSALPEQKStqgTKRS 238
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1293418642 245 KVAQLFRHGYARGTIALWLTYFMGLFVIYLLNGWLPTILRSGGLSLQQAAMMTGLFQLGGPLGGILVGMLMDRASAKaVI 324
Cdd:TIGR00895 239 VFKALFQGKTARITVLLWLLYFMLLVGVYFLTNWLPKLMVELGFSLSLAATGGALFNFGGVIGSIIFGWLADRLGPR-VT 317
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1293418642 325 AATYFLGCLCLLSQGLMDFGSAALSVLIFISGMCINGAQNGLQAYSPAYYQTEIRATGVSWMHGIGRTGAILSSTLGGML 404
Cdd:TIGR00895 318 ALLLLLGAVFAVLVGSTLFSPTLLLLLGAIAGFFVNGGQSGLYALMALFYPTAIRATGVGWAIGIGRLGAIIGPILAGYL 397

                  .
gi 1293418642 405 M 405
Cdd:TIGR00895 398 L 398
PRK11551 PRK11551
putative 3-hydroxyphenylpropionic transporter MhpT; Provisional
26-418 1.01e-73

putative 3-hydroxyphenylpropionic transporter MhpT; Provisional


Pssm-ID: 236927 [Multi-domain]  Cd Length: 406  Bit Score: 237.17  E-value: 1.01e-73
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1293418642  26 LLLCFIIIMLDGYDAAVMGFVAPALIEDWGISRAEMGPILGAAMFGVAIGALVAGPLSDRYGRKRILLWSVALFALFSLA 105
Cdd:PRK11551   17 IGLCFLVALLEGLDLQSAGVAAPRMAQEFGLDVAQMGWAFSAGILGLLPGALLGGRLADRIGRKRILIVSVALFGLFSLA 96
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1293418642 106 GAVAQSPSQLALMRFLTGLGLGAVMPNCVTLVAEYMPERRKGVMITLMYSGFNVGSGLGGFIAAGLLSHYSWHSALIFGG 185
Cdd:PRK11551   97 TAQAWDFPSLLVARLLTGVGLGGALPNLIALTSEAVGPRLRGTAVSLMYCGVPFGGALASVIGVLAAGDAAWRHIFYVGG 176
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1293418642 186 VLPLVVLPFMIVMLPESAMNMVARRLPGEqiaralnrlggqftaetvfqlnappitRSSKVAQLFRHGYARGTIALWLTY 265
Cdd:PRK11551  177 VGPLLLVPLLMRWLPESRAFAQAAGAGKQ---------------------------RAPVLRALFGEGRATATLLLWISY 229
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1293418642 266 FMGLFVIYLLNGWLPTILRSGGLSLQQAAMMTGLFQLGGPLGGILVGMLMDRASAKAVIAATY--FLGCLCLLSqglMDF 343
Cdd:PRK11551  230 FFTLIVLYFLLNWLPSLLVGQGLSRSQAGLVQIAFNIGGALGSLLIGALMDRLRPRRVVLLIYagILASLAALA---AAP 306
                         330       340       350       360       370       380       390
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1293418642 344 GSAALSVLIFISGMCINGAQNGLQAYSPAYYQTEIRATGVSWMHGIGRTGAILSSTLGGMLMLAvpGHSSIFLVL 418
Cdd:PRK11551  307 SFAGMLLAGFAAGLFVVGGQSVLYALAPLFYPTQVRGTGVGAAVAVGRLGSMAGPLLAGQLLAL--GRSTVGVIG 379
UhpC COG2271
Sugar phosphate permease [Carbohydrate transport and metabolism];
15-431 2.11e-55

Sugar phosphate permease [Carbohydrate transport and metabolism];


Pssm-ID: 441872 [Multi-domain]  Cd Length: 363  Bit Score: 188.16  E-value: 2.11e-55
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1293418642  15 ARPVSRFQWNVLLLCFIIIMLDGYDAAVMGFVAPALIEDWGISRAEMGPILGAAMFGVAIGALVAGPLSDRYGRKRILLW 94
Cdd:COG2271     1 ARAPSRYRWRILALLFLAYFLNYLDRSNLSVAAPPLQADLGLSAAQLGLLASAFFLGYALGQIPAGLLADRFGRRRVLAI 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1293418642  95 SVALFALFSLAGAVAQSPSQLALMRFLTGLGLGAVMPNCVTLVAEYMPERRKGVMITLMYSGFNVGSGLGGFIAAGLLSH 174
Cdd:COG2271    81 GLLLWGLATLLFGFATSFWQLLLLRFLLGLGEAGFFPAALKLIAEWFPPKERGRALGIFNAGGPLGGALAPPLLGWLLAA 160
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1293418642 175 YSWHSALIFGGVLPLVVLPFMivmlpesamnmvarrlpgeqiaralnrlggqftaetvfqlnappitrsskvaqlfrhgy 254
Cdd:COG2271   161 FGWRAAFLILGLPGLLLALLR----------------------------------------------------------- 181
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1293418642 255 argTIALWLTYFMGLFVIYLLNGWLPTILRSG-GLSLQQAAMMTGLFQLGGPLGGILVGMLMDR--ASAKAVIAATYFLG 331
Cdd:COG2271   182 ---FWLLALAYFLVYFALYGFLTWLPTYLVEVrGLSLAQAGLLLSLPFLAGIVGSLLGGWLSDRlgRRRKLVLAIGLLLA 258
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1293418642 332 CLCLLSQGLMDfGSAALSVLIFISGMCINGAQNGLQAYSPAYYQTEIRATGVSWMHGIGRTGAILSSTLGGMLmLAVPGH 411
Cdd:COG2271   259 ALALLLLALLP-SPALAIALLFLAGFGLGGAFGLLWALAAELFPKKARGTASGLVNTFGFLGGALGPLLVGYL-LDATGY 336
                         410       420
                  ....*....|....*....|
gi 1293418642 412 SSIFLVLGLPACLAGICILL 431
Cdd:COG2271   337 QAAFLLLAALALLAALLALL 356
MFS_1 pfam07690
Major Facilitator Superfamily;
28-398 7.70e-30

Major Facilitator Superfamily;


Pssm-ID: 429598 [Multi-domain]  Cd Length: 344  Bit Score: 119.06  E-value: 7.70e-30
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1293418642  28 LCFIIIMLDGYDAAVMGFVAPALIEDWGISRAEMGPILGAAMFGVAIGALVAGPLSDRYGRKRILLWSVALFALFSLAGA 107
Cdd:pfam07690   1 LFLAAFLAALGRSLLGPALPLLLAEDLGISPTEIGLLLTLFSLGYALAQPLAGRLSDRFGRRRVLLIGLLLFALGLLLLL 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1293418642 108 VAQSPSQLALMRFLTGLGLGAVMPNCVTLVAEYMPERRKGVMITLMYSGFNVGSGLGGFIAAGLLSHYSWHSALIFGGVL 187
Cdd:pfam07690  81 FASSLWLLLVLRVLQGLGAGALFPAALALIADWFPPEERGRALGLVSAGFGLGAALGPLLGGLLASLFGWRAAFLILAIL 160
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1293418642 188 PLVVLPFMIVMLPESAMnmvarrlpgeqiaralnrlggqftaetvfQLNAPPITRSSKVAQLFRHGYARGTIALWLTYFM 267
Cdd:pfam07690 161 SLLAAVLLLLPRPPPES-----------------------------KRPKPAEEARLSLIVAWKALLRDPVLWLLLALLL 211
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1293418642 268 GLFVIYLLNGWLPTILRSGGLSLQQAAMMTGLFQLGGPLGGILVGMLMDRASAKAVIAATYFLGCLCLLSQGLMDF--GS 345
Cdd:pfam07690 212 FGFAFFGLLTYLPLYQEVLGLSALLAGLLLGLGGLLGAIGRLLLGRLSDRLGRRRRLLLALLLLILAALGLLLLSLtlSS 291
                         330       340       350       360       370
                  ....*....|....*....|....*....|....*....|....*....|...
gi 1293418642 346 AALSVLIFISGMCINGAQNGLQAYSPAYYQTEIRATGVSWMHGIGRTGAILSS 398
Cdd:pfam07690 292 LWLLLALLLLGFGFGLVFPALNALVSDLAPKEERGTASGLYNTAGSLGGALGP 344
 
Name Accession Description Interval E-value
MFS_PcaK_like cd17365
4-hydroxybenzoate transporter PcaK and similar transporters of the Major Facilitator ...
26-436 1.35e-128

4-hydroxybenzoate transporter PcaK and similar transporters of the Major Facilitator Superfamily; This aromatic acid:H(+) symporter subfamily includes Acinetobacter sp. 4-hydroxybenzoate transporter PcaK, Pseudomonas putida gallate transporter (GalT), Corynebacterium glutamicum gentisate transporter (GenK), Nocardioides sp. 1-hydroxy-2-naphthoate transporter (PhdT), Escherichia coli 3-(3-hydroxy-phenyl)propionate (3HPP) transporter (MhpT), and similar proteins. These transporters are involved in the uptake across the cytoplasmic membrane of specific aromatic compounds such as 4-hydroxybenzoate, gallate, gentisate (2,5-dihydroxybenzoate), 1-hydroxy-2-naphthoate, and 3HPP, respectively. The PcaK-like aromatic acid:H(+) symporter subfamily belongs to the Metazoan Synaptic Vesicle Glycoprotein 2 (SV2) and related small molecule transporter family (SV2-like) of the Major Facilitator Superfamily (MFS) of membrane transport proteins. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340923 [Multi-domain]  Cd Length: 351  Bit Score: 376.16  E-value: 1.35e-128
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1293418642  26 LLLCFIIIMLDGYDAAVMGFVAPALIEDWGISRAEMGPILGAAMFGVAIGALVAGPLSDRYGRKRILLWSVALFALFSLA 105
Cdd:cd17365     1 LALCFLIIVLDGFDLAVMGFVAPALAQDWGLSPAQLGPVGSAALFGMAIGALLAGPLADRFGRKRVLLVSVALFGLFTLL 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1293418642 106 GAVAQSPSQLALMRFLTGLGLGAVMPNCVTLVAEYMPERRKGVMITLMYSGFNVGSGLGGFIAAGLLSHYSWHSALIFGG 185
Cdd:cd17365    81 TAFAQSVLQLALLRFLTGLGLGAAMPNAITLVSEYAPARRRSLAVTLMFCGYPLGAALGGFLAAALIPAFGWRSVFLLGG 160
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1293418642 186 VLPLVVLPFMivmlpesamnmvarrlpgeqiaralnrlggqftaetvfqlnappitrsskvaqlfrhgyaRGTIALWLTY 265
Cdd:cd17365   161 VPPLILLPLL------------------------------------------------------------RGTLLLWVTF 180
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1293418642 266 FMGLFVIYLLNGWLPTILRSGGLSLQQAAMMTGLFQLGGPLGGILVGMLMDRASAKAVIAATYFLGCLCLLSQGLMDFGS 345
Cdd:cd17365   181 FMGLLLVYLLNSWLPKLMVEAGYSLSQALTITLLLNIGGVIGSLLLGWLADRFGPKRVLALFFALGAVSLALLGVSPASL 260
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1293418642 346 AALSVLIFISGMCINGAQNGLQAYSPAYYQTEIRATGVSWMHGIGRTGAILSSTLGGMLMLAVPGHSSIFLVLGLPACLA 425
Cdd:cd17365   261 VLLYVLVFLAGACVNGAQVGLYALAARFYPTEVRATGVGWALGVGRLGAILGPLLGGLLLAAGLGPESVFLALAIPAALG 340
                         410
                  ....*....|.
gi 1293418642 426 GICILLHRMNH 436
Cdd:cd17365   341 ALAVLLLRLRR 351
2A0115 TIGR00895
benzoate transport; [Transport and binding proteins, Carbohydrates, organic alcohols, and ...
8-405 1.98e-112

benzoate transport; [Transport and binding proteins, Carbohydrates, organic alcohols, and acids]


Pssm-ID: 273327 [Multi-domain]  Cd Length: 398  Bit Score: 336.64  E-value: 1.98e-112
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1293418642   8 DVKAWIDARPVSRFQWNVLLLCFIIIMLDGYDAAVMGFVAPALIEDWGISRAEMGPILGAAMFGVAIGALVAGPLSDRYG 87
Cdd:TIGR00895   1 DVQNNIRKQPLSRYQWRAIILSFLIMLMDGYDLAAMGFAAPAISAEWGLDPVQLGFLFSAGLIGMAFGALFFGPLADRIG 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1293418642  88 RKRILLWSVALFALFSLAGAVAQSPSQLALMRFLTGLGLGAVMPNCVTLVAEYMPERRKGVMITLMYSGFNVGSGLGGFI 167
Cdd:TIGR00895  81 RRRVLLWSILLFSVFTLLCALATNVTQLLILRFLAGLGLGGLMPNLNALVSEYAPKRFRGTAVGLMFCGYPIGAAVGGFL 160
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1293418642 168 AAGLLSHYSWHSALIFGGVLPLVVLPFMIVMLPESAMNMVARRlpGEQIARALNRLGGQFTAETVFQLNAPPI---TRSS 244
Cdd:TIGR00895 161 AGWLIPVFGWRSLFYVGGIAPLLLLLLLMRFLPESIDFLVSKR--PETVRRIVNAIAPQMQAEAQSALPEQKStqgTKRS 238
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1293418642 245 KVAQLFRHGYARGTIALWLTYFMGLFVIYLLNGWLPTILRSGGLSLQQAAMMTGLFQLGGPLGGILVGMLMDRASAKaVI 324
Cdd:TIGR00895 239 VFKALFQGKTARITVLLWLLYFMLLVGVYFLTNWLPKLMVELGFSLSLAATGGALFNFGGVIGSIIFGWLADRLGPR-VT 317
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1293418642 325 AATYFLGCLCLLSQGLMDFGSAALSVLIFISGMCINGAQNGLQAYSPAYYQTEIRATGVSWMHGIGRTGAILSSTLGGML 404
Cdd:TIGR00895 318 ALLLLLGAVFAVLVGSTLFSPTLLLLLGAIAGFFVNGGQSGLYALMALFYPTAIRATGVGWAIGIGRLGAIIGPILAGYL 397

                  .
gi 1293418642 405 M 405
Cdd:TIGR00895 398 L 398
PRK11551 PRK11551
putative 3-hydroxyphenylpropionic transporter MhpT; Provisional
26-418 1.01e-73

putative 3-hydroxyphenylpropionic transporter MhpT; Provisional


Pssm-ID: 236927 [Multi-domain]  Cd Length: 406  Bit Score: 237.17  E-value: 1.01e-73
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1293418642  26 LLLCFIIIMLDGYDAAVMGFVAPALIEDWGISRAEMGPILGAAMFGVAIGALVAGPLSDRYGRKRILLWSVALFALFSLA 105
Cdd:PRK11551   17 IGLCFLVALLEGLDLQSAGVAAPRMAQEFGLDVAQMGWAFSAGILGLLPGALLGGRLADRIGRKRILIVSVALFGLFSLA 96
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1293418642 106 GAVAQSPSQLALMRFLTGLGLGAVMPNCVTLVAEYMPERRKGVMITLMYSGFNVGSGLGGFIAAGLLSHYSWHSALIFGG 185
Cdd:PRK11551   97 TAQAWDFPSLLVARLLTGVGLGGALPNLIALTSEAVGPRLRGTAVSLMYCGVPFGGALASVIGVLAAGDAAWRHIFYVGG 176
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1293418642 186 VLPLVVLPFMIVMLPESAMNMVARRLPGEqiaralnrlggqftaetvfqlnappitRSSKVAQLFRHGYARGTIALWLTY 265
Cdd:PRK11551  177 VGPLLLVPLLMRWLPESRAFAQAAGAGKQ---------------------------RAPVLRALFGEGRATATLLLWISY 229
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1293418642 266 FMGLFVIYLLNGWLPTILRSGGLSLQQAAMMTGLFQLGGPLGGILVGMLMDRASAKAVIAATY--FLGCLCLLSqglMDF 343
Cdd:PRK11551  230 FFTLIVLYFLLNWLPSLLVGQGLSRSQAGLVQIAFNIGGALGSLLIGALMDRLRPRRVVLLIYagILASLAALA---AAP 306
                         330       340       350       360       370       380       390
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1293418642 344 GSAALSVLIFISGMCINGAQNGLQAYSPAYYQTEIRATGVSWMHGIGRTGAILSSTLGGMLMLAvpGHSSIFLVL 418
Cdd:PRK11551  307 SFAGMLLAGFAAGLFVVGGQSVLYALAPLFYPTQVRGTGVGAAVAVGRLGSMAGPLLAGQLLAL--GRSTVGVIG 379
UhpC COG2271
Sugar phosphate permease [Carbohydrate transport and metabolism];
15-431 2.11e-55

Sugar phosphate permease [Carbohydrate transport and metabolism];


Pssm-ID: 441872 [Multi-domain]  Cd Length: 363  Bit Score: 188.16  E-value: 2.11e-55
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1293418642  15 ARPVSRFQWNVLLLCFIIIMLDGYDAAVMGFVAPALIEDWGISRAEMGPILGAAMFGVAIGALVAGPLSDRYGRKRILLW 94
Cdd:COG2271     1 ARAPSRYRWRILALLFLAYFLNYLDRSNLSVAAPPLQADLGLSAAQLGLLASAFFLGYALGQIPAGLLADRFGRRRVLAI 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1293418642  95 SVALFALFSLAGAVAQSPSQLALMRFLTGLGLGAVMPNCVTLVAEYMPERRKGVMITLMYSGFNVGSGLGGFIAAGLLSH 174
Cdd:COG2271    81 GLLLWGLATLLFGFATSFWQLLLLRFLLGLGEAGFFPAALKLIAEWFPPKERGRALGIFNAGGPLGGALAPPLLGWLLAA 160
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1293418642 175 YSWHSALIFGGVLPLVVLPFMivmlpesamnmvarrlpgeqiaralnrlggqftaetvfqlnappitrsskvaqlfrhgy 254
Cdd:COG2271   161 FGWRAAFLILGLPGLLLALLR----------------------------------------------------------- 181
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1293418642 255 argTIALWLTYFMGLFVIYLLNGWLPTILRSG-GLSLQQAAMMTGLFQLGGPLGGILVGMLMDR--ASAKAVIAATYFLG 331
Cdd:COG2271   182 ---FWLLALAYFLVYFALYGFLTWLPTYLVEVrGLSLAQAGLLLSLPFLAGIVGSLLGGWLSDRlgRRRKLVLAIGLLLA 258
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1293418642 332 CLCLLSQGLMDfGSAALSVLIFISGMCINGAQNGLQAYSPAYYQTEIRATGVSWMHGIGRTGAILSSTLGGMLmLAVPGH 411
Cdd:COG2271   259 ALALLLLALLP-SPALAIALLFLAGFGLGGAFGLLWALAAELFPKKARGTASGLVNTFGFLGGALGPLLVGYL-LDATGY 336
                         410       420
                  ....*....|....*....|
gi 1293418642 412 SSIFLVLGLPACLAGICILL 431
Cdd:COG2271   337 QAAFLLLAALALLAALLALL 356
MFS_SV2_like cd17316
Metazoan Synaptic vesicle glycoprotein 2 (SV2) and related small molecule transporters of the ...
26-430 7.00e-50

Metazoan Synaptic vesicle glycoprotein 2 (SV2) and related small molecule transporters of the Major Facilitator Superfamily; This family is composed of metazoan synaptic vesicle glycoprotein 2 (SV2) and related small molecule transporters including those that transport inorganic phosphate (Pht), aromatic compounds (PcaK and related proteins), proline/betaine (ProP), alpha-ketoglutarate (KgtP), citrate (CitA), shikimate (ShiA), and cis,cis-muconate (MucK), among others. SV2 is a transporter-like protein that serves as the receptor for botulinum neurotoxin A (BoNT/A), one of seven neurotoxins produced by the bacterium Clostridium botulinum. BoNT/A blocks neurotransmitter release by cleaving synaptosome-associated protein of 25 kD (SNAP-25) within presynaptic nerve terminals. Also included in this family is synaptic vesicle 2 (SV2)-related protein (SVOP) and similar proteins. SVOP is a transporter-like nucleotide binding protein that localizes to neurotransmitter-containing vesicles. The SV2-like family belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340874 [Multi-domain]  Cd Length: 353  Bit Score: 173.17  E-value: 7.00e-50
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1293418642  26 LLLCFIIIMLDGYDAAVMGFVAPALIE--DWGISRAEMGPILGAAMFGVAIGALVAGPLSDRYGRKRILLWSVALFALFS 103
Cdd:cd17316     1 LLLAGLGWFFDAYDFFLIGFVAPVLAAefSLGLSLLQTGLLFAAGFLGRPIGALLFGYLGDRIGRKKALILTLLLFGLAT 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1293418642 104 LAGAVAQSPSQLALMRFLTGLGLGAVMPNCVTLVAEYMPERRKGVMITLMYSGFNVGSGLGGFIAAGLLSH----YSWHS 179
Cdd:cd17316    81 LLIGLLPTPILLLVLRFLQGIGIGGEYPGASTYVAEFAPSKRRGFALGLLQSGWALGALLAALVASLLIPLlsgdWGWRI 160
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1293418642 180 ALIFGGVLPLVVLPFMivmlpesamnmvarrlpgeqiaralnrlggqftaetvfqlnappitrsskvaqlfrhgyaRGTI 259
Cdd:cd17316   161 LFLIGALPALLALLLR------------------------------------------------------------RRTL 180
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1293418642 260 ALWLTYFMGLFVIYLLNGWLPTILRSG-GLSLQQAAMMTGLFQLGGPLGGILVGMLMDRASAKAVIAATYFL-GCLCLLS 337
Cdd:cd17316   181 LLILLWFFISFGYYGLTTFLPTYLQTVlGLSPATSSLYLLLISLGALVGALIAGLLSDRIGRKKTLVIGLILsGILALPL 260
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1293418642 338 QGLMDFGSAALSVLIFISGMCINGAQNGLQAYSPAYYQTEIRATGVSWMHGIGRTGAILSSTLGGMLMLAVPGHSSIFLV 417
Cdd:cd17316   261 FYLLSGSPTLLLLLLFILSFFVGGVWGALYAYLAELFPTEVRATGVGLSYNLGRLGGGGAPPLIALLLASTGGTGVPALI 340
                         410
                  ....*....|...
gi 1293418642 418 LGLPACLAGICIL 430
Cdd:cd17316   341 LALLAIVALIVAL 353
MFS_MucK cd17371
Cis,cis-muconate transport protein and similar proteins of the Major Facilitator Superfamily; ...
26-431 1.94e-46

Cis,cis-muconate transport protein and similar proteins of the Major Facilitator Superfamily; This subfamily is composed of Acinetobacter sp. Cis,cis-muconate transport protein (MucK), Escherichia coli putative sialic acid transporter 1, and similar proteins. MucK functions in the uptake of muconate and allows Acinetobacter calcoaceticus ADP1 (BD413) to grow on exogenous cis,cis-muconate as the sole carbon source. The MucK subfamily belongs to the Metazoan Synaptic Vesicle Glycoprotein 2 (SV2) and related small molecule transporter family (SV2-like) of the Major Facilitator Superfamily (MFS) of membrane transport proteins. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340929 [Multi-domain]  Cd Length: 389  Bit Score: 165.17  E-value: 1.94e-46
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1293418642  26 LLLCFIIIMLDGYDAAVMGFVAPALIEDWGISRAEMGPILGAAMFGVAIGALVAGPLSDRYGRKRILLWSVALFALFSLA 105
Cdd:cd17371     1 FWAAFLGWALDGFDLLLLGLVLPALIAEFGLDEAEAGLLGTVTLAGGAIGGILGGILADRFGRVRVLVITILLFAVFTLL 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1293418642 106 GAVAQSPSQLALMRFLTGLGLGAVMPNCVTLVAEYMPERRKGVMITLMYSGFNVGSGLGGFIAAGLLSHYSWHSA---LI 182
Cdd:cd17371    81 CGFAQNYWQLLILRALAGLGFGGEWAAGAALMAEYVPARHRGKALGYVQSGWAVGWLLATLLAALLFPLLPPEIAwrvLF 160
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1293418642 183 FGGVLPLVVLPFMIVMLPESAMnmvarrlpgEQIARALNRLGGQftaetvfqlnappitrSSKVAQLFRHGYARGTIALW 262
Cdd:cd17371   161 LLGALPALLVLFIRRFVKEPPQ---------WQAARAARRHFAD----------------RPSLRELFSPPLLRTTLLAS 215
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1293418642 263 LTYFMGLFVIYLLNGWLPTILRSG-GLSLQQAAMMTGLFQLGGPLGGILVGMLMDRASAKAVIAATYFLGCLCLLSQGLM 341
Cdd:cd17371   216 LLATGALGGYYGITTWLPSYLTGErGLSFEGSAGYLVVTILGGFLGYLAGGFLADRIGRRNNFALFALGSAISILLYFFL 295
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1293418642 342 DFGSAALSVLIFISGMCINGAQNGLQAYSPAYYQTEIRATGVSWMHGIGRTGAILSSTLGGMLMLAVpGHSSIFLVLGLP 421
Cdd:cd17371   296 PLSPTLILILGFPLGFFASGPFSGMGAYLTELFPTAVRATAQGFCYNVGRIIGALFPFLVGFLATSG-SLGTAIAVFAAV 374
                         410
                  ....*....|
gi 1293418642 422 ACLAGICILL 431
Cdd:cd17371   375 YYIAGLVLAL 384
AraJ COG2814
Predicted arabinose efflux permease AraJ, MFS family [Carbohydrate transport and metabolism];
19-397 1.56e-42

Predicted arabinose efflux permease AraJ, MFS family [Carbohydrate transport and metabolism];


Pssm-ID: 442063 [Multi-domain]  Cd Length: 348  Bit Score: 153.59  E-value: 1.56e-42
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1293418642  19 SRFQWNVLLLCFIIIMLDGYDAAVMGFVAPALIEDWGISRAEMGPILGAAMFGVAIGALVAGPLSDRYGRKRILLWSVAL 98
Cdd:COG2814     5 PRRRWLALLALALGAFLSGLGIGIVLPALPLIAADLGASPAQAGLVVTAYLLGAALGAPLAGRLADRFGRRRVLLLGLLL 84
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1293418642  99 FALFSLAGAVAQSPSQLALMRFLTGLGLGAVMPNCVTLVAEYMPERRKGVMITLMYSGFNVGSGLGGFIAAGLLSHYSWH 178
Cdd:COG2814    85 FALGSLLCALAPSLWLLLAARFLQGLGAGALFPAALALIADLVPPERRGRALGLLGAGLGLGPALGPLLGGLLADLFGWR 164
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1293418642 179 SALIFGGVLPLVVLPFMIVMLPESamnmvarrlpgeqiaralnrlggqftaetvfqlnaPPITRSSKVAQLFRHGYARGT 258
Cdd:COG2814   165 WVFLVNAVLALLALLLLLRLLPES-----------------------------------RPAARARLRGSLRELLRRPRL 209
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1293418642 259 IALWLTYFMGLFVIYLLNGWLPTILRSG-GLSLQQAAMMTGLFQLGGPLGGILVGMLMDRASAKAVIAATYFLGCLCLLS 337
Cdd:COG2814   210 LLLLLLAFLLGFGFFALFTYLPLYLQEVlGLSASAAGLLLALFGLGGVLGALLAGRLADRFGRRRLLLIGLLLLALGLLL 289
                         330       340       350       360       370       380
                  ....*....|....*....|....*....|....*....|....*....|....*....|
gi 1293418642 338 QGLMDfGSAALSVLIFISGMCINGAQNGLQAYSPAYYQTEIRATGVSWMHGIGRTGAILS 397
Cdd:COG2814   290 LALAG-SLWLLLLALFLLGFGFGLLFPLLQALVAELAPPEARGRASGLYNSAFFLGGPLA 348
NarK COG2223
Nitrate/nitrite transporter NarK [Inorganic ion transport and metabolism];
22-431 3.13e-39

Nitrate/nitrite transporter NarK [Inorganic ion transport and metabolism];


Pssm-ID: 441825 [Multi-domain]  Cd Length: 392  Bit Score: 145.79  E-value: 3.13e-39
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1293418642  22 QWNVLLLCFIIIMLDGYDAAVMGFVAPALIEDWGISRAEMGPILGAAMFGVAIGALVAGPLSDRYGRKRILLWSVALFAL 101
Cdd:COG2223     3 RWRVLLLATLAFFLAFGVWYLWSVLAPPLAEEFGLSAAQLGLLFAIPVLVGALLRIPLGFLVDRFGPRRVLLIGLLLLGI 82
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1293418642 102 FSLAGAVAQSPSQLALMRFLTGLGLGAVMPNCVTLVAEYMPERRKGVMITLMYSGFNVGSGLGGFIAAGLLSHYSWHSAL 181
Cdd:COG2223    83 GLLLLALAVSYWLLLLLGLLLGIGGGGSFAVGIALVSKWFPPDRRGLALGLAAGGGNLGAAVAAFLAPLLIAAFGWRNAF 162
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1293418642 182 IFGGVLPLVVLPFMIVMLpesamnmvaRRLPGEQIARALNRLGGQFtaetvfqlnappitrsskvaQLFRHgyaRGTIAL 261
Cdd:COG2223   163 LILGILLLVVAVLAWLFL---------RDPPAGAAAAAKASLRDQL--------------------EALRD---PRFWLL 210
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1293418642 262 WLTYFMGLFVIYLLNGWLPTILRSG-GLSLQQAAMMTGLFQLGGPLGGILVGMLMDRASAKAVIAATYFLGCLCLLSQGL 340
Cdd:COG2223   211 SLLYFGTFGSFIGFSSWLPPYLVDQfGLSAATAGLLAALFALLGALGRPLGGWLSDRIGGRRVLLIVFALMALGLLLLAL 290
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1293418642 341 MDFGSAALSVLIFISGMCINGAQNGLQAYSPAYYQTEIRATGVSWMHGIGRTGAILSSTLGGMLMLAVPGHSSIFLVLGL 420
Cdd:COG2223   291 ALGSLWLFLVLFLLLGLALGGGNGAVFALVPDIFPTKNAGAVYGLVGAAGGLGGFLGPLLFGALLDATGSYTAAFLVFAV 370
                         410
                  ....*....|.
gi 1293418642 421 PACLAGICILL 431
Cdd:COG2223   371 LALVALVLTLL 381
MFS_ExuT_GudP_like cd17319
Hexuronate transporter, Glucarate transporter, and similar transporters of the Major ...
23-431 8.39e-39

Hexuronate transporter, Glucarate transporter, and similar transporters of the Major Facilitator Superfamily; This family is composed of predominantly bacterial transporters for hexuronate (ExuT), glucarate (GudP), galactarate (GarP), and galactonate (DgoT). They mediate the uptake of these compounds into the cell. They belong to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340877 [Multi-domain]  Cd Length: 358  Bit Score: 143.87  E-value: 8.39e-39
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1293418642  23 WNVLLLCFIIIMLDGYDAAVMGFVAPALIEDWGISRAEMGPILGAAMFGVAIGALVAGPLSDRYGRKRILLWSVALFALF 102
Cdd:cd17319     2 WRIIPLLFLAYVINYLDRVNISVAAPTIMKDLGLSPTQYGLIASAFFLGYALFQVPGGWLLDRFGARKVLAVSMLLWSLF 81
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1293418642 103 SLAGAVAQSPSQLALMRFLTGLGLGAVMPNCVTLVAEYMPERRKGVMITLMYSGFNVGSGLGGFIAAGLLSHYSWHSALI 182
Cdd:cd17319    82 TALTGFATSLTSLYVLRFLLGVAEAGFFPGAIKALAEWFPARERGRATGLFNSGAPLGAAIGPPLSGWLLLLFGWRWAFI 161
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1293418642 183 FGGVLPLVVLPFMIVMLpesamnmvarrlpgeqiaralnrlggqftaetvfqlnappitrsskvaqlfrhgyaRGTIALW 262
Cdd:cd17319   162 IEGLLGLLLAVLWWFYL--------------------------------------------------------RQVWGLA 185
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1293418642 263 LTYFMGLFVIYLLNGWLPTILRS-GGLSLQQAAMMTGLFQLGGPLGGILVGMLMDR---ASAKAVIAATYFLGCLCLLSQ 338
Cdd:cd17319   186 LGYFGINYALYGLLTWLPTYLKQaRGFSLKQVGLLAAIPFLAGAIGMILGGRLSDRllrGARRLVIIIGLLLAAVGLLLA 265
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1293418642 339 GLMDfGSAALSVLIFISGMCINGAQNGLQAYSPAYYQTEIRATGVSWMHGIGRTGAILSSTLGGMLMLAVPGHSSIFLVL 418
Cdd:cd17319   266 YLTT-SPVVAVILLSLAGFGIGAASPVFWSLPADLLPGEAAATAGGLINSGGNLGGFVAPLLIGYLVDATGSYTAAFLFL 344
                         410
                  ....*....|...
gi 1293418642 419 GLPACLAGICILL 431
Cdd:cd17319   345 AAVALLAALLVLL 357
MFS_1 pfam07690
Major Facilitator Superfamily;
28-398 7.70e-30

Major Facilitator Superfamily;


Pssm-ID: 429598 [Multi-domain]  Cd Length: 344  Bit Score: 119.06  E-value: 7.70e-30
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1293418642  28 LCFIIIMLDGYDAAVMGFVAPALIEDWGISRAEMGPILGAAMFGVAIGALVAGPLSDRYGRKRILLWSVALFALFSLAGA 107
Cdd:pfam07690   1 LFLAAFLAALGRSLLGPALPLLLAEDLGISPTEIGLLLTLFSLGYALAQPLAGRLSDRFGRRRVLLIGLLLFALGLLLLL 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1293418642 108 VAQSPSQLALMRFLTGLGLGAVMPNCVTLVAEYMPERRKGVMITLMYSGFNVGSGLGGFIAAGLLSHYSWHSALIFGGVL 187
Cdd:pfam07690  81 FASSLWLLLVLRVLQGLGAGALFPAALALIADWFPPEERGRALGLVSAGFGLGAALGPLLGGLLASLFGWRAAFLILAIL 160
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1293418642 188 PLVVLPFMIVMLPESAMnmvarrlpgeqiaralnrlggqftaetvfQLNAPPITRSSKVAQLFRHGYARGTIALWLTYFM 267
Cdd:pfam07690 161 SLLAAVLLLLPRPPPES-----------------------------KRPKPAEEARLSLIVAWKALLRDPVLWLLLALLL 211
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1293418642 268 GLFVIYLLNGWLPTILRSGGLSLQQAAMMTGLFQLGGPLGGILVGMLMDRASAKAVIAATYFLGCLCLLSQGLMDF--GS 345
Cdd:pfam07690 212 FGFAFFGLLTYLPLYQEVLGLSALLAGLLLGLGGLLGAIGRLLLGRLSDRLGRRRRLLLALLLLILAALGLLLLSLtlSS 291
                         330       340       350       360       370
                  ....*....|....*....|....*....|....*....|....*....|...
gi 1293418642 346 AALSVLIFISGMCINGAQNGLQAYSPAYYQTEIRATGVSWMHGIGRTGAILSS 398
Cdd:pfam07690 292 LWLLLALLLLGFGFGLVFPALNALVSDLAPKEERGTASGLYNTAGSLGGALGP 344
ProP COG0477
MFS family permease, includes anhydromuropeptide permease AmpG [Carbohydrate transport and ...
19-310 3.76e-29

MFS family permease, includes anhydromuropeptide permease AmpG [Carbohydrate transport and metabolism, Amino acid transport and metabolism, Inorganic ion transport and metabolism, General function prediction only];


Pssm-ID: 440245 [Multi-domain]  Cd Length: 295  Bit Score: 115.68  E-value: 3.76e-29
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1293418642  19 SRFQWNVLLLCFIIIMLDGYDAAVMGFVAPALIEDWGISRAEMGPILGAAMFGVAIGALVAGPLSDRYGRKRILLWSVAL 98
Cdd:COG0477     9 TRRRRRALLALALGTFLEGLDFTIVNVALPSIAADLGASSAQLGWIVSAYLLGRAIGLLLFGRLGDRYGRKRVLLIGLLL 88
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1293418642  99 FALFSLAGAVAQSPSQLALMRFLTGLGLGAVMPNCVTLVAEYMPERRKGVMITLMYSGFNVGSGLGGFIAAGLLSHYSWH 178
Cdd:COG0477    89 FGLASLLCGLAPSPELLIAARALQGIGAGGLMPGALALIAELFPARERGRALGLWGAAIGLGLALGPLLGGLLVAALGWR 168
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1293418642 179 SALIFGGVLPLVVLpFMIVMLPESAMNMVARRLPGEQIARALNRLGGQFTAETVFQLNAPPITrsskVAQLFRHGYARGT 258
Cdd:COG0477   169 WIFLINAPLGLLAL-VLRLRLPESRGLLLALLALALAALLLAALALALLALLLLLLLLLLALL----ALLLAGAALLLLL 243
                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|..
gi 1293418642 259 IALWLTYFMGLFVIYLLNGWLPTILRSGGLSLQQAAMMTGLFQLGGPLGGIL 310
Cdd:COG0477   244 ALLLLALLLLLALLLLAALLLLLLLLLLLALLLALLLLLLLLLLLLLLALLL 295
CynX COG2807
Cyanate permease [Inorganic ion transport and metabolism];
41-431 9.16e-29

Cyanate permease [Inorganic ion transport and metabolism];


Pssm-ID: 442057 [Multi-domain]  Cd Length: 399  Bit Score: 116.90  E-value: 9.16e-29
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1293418642  41 AVMGFVAPALIEDWGISRAEMGPILGAAMFGVAIGALVAGPLSDRYGRKRILLWSVALFALFSLAGAVAQSPSQLALMRF 120
Cdd:COG2807    35 TSVGPLLPEIRADLGLSATQAGLLTTLPLLAFGLFAPLAPRLARRFGLERTLLLALLLLAAGLLLRSLAPSVALLLAGTA 114
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1293418642 121 LTGLGLGAVMPNCVTLVAEYMPERRkGVMITLMYSGFNVGSGLGGFIAAGLLSHYSWHSALIFGGVLPLVVLPFMIVmlp 200
Cdd:COG2807   115 LIGAGIAVGNVLLPGLIKRWFPDRV-GLMTGLYTAAMGLGAALAAGLTVPLAAALGWRGALAVWALLALLALLLWLP--- 190
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1293418642 201 esamnmVARRLPGEqiaralnrlggqftaetvfqlnAPPITRSSKVAQLFRHGYARgtiALWLTYFMGLFVIYLLNGWLP 280
Cdd:COG2807   191 ------LLRRRPAA----------------------AAAAPAAASLRSLWRSPLAW---LLTLFFGLQSLLYYAVVAWLP 239
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1293418642 281 TILRSGGLSLQQAAMMTGLFQLGGPLGGILVGMLMDRASAKAVIAATYFLGCLCLLSqGLMDFGSAALSVLIFISGMCIN 360
Cdd:COG2807   240 PILRDAGLSAATAGLLLSLFQLAGIPGSLLVPLLADRLGDRRPLLLLLGLLGLAGLL-GLLLAPGSLPWLWAVLLGLGQG 318
                         330       340       350       360       370       380       390
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1293418642 361 GAQNGLQAYSPAYYQT-EIRATGVSWMHGIGRTGAILSSTLGGMLMLAVPGHSSIFLVLGLPACLAGICILL 431
Cdd:COG2807   319 GLFPLALTLIGLRARTpAEAAALSGMAQSVGYLLAALGPLLVGALHDATGSWTAALLLLAALAVLMLVAGLL 390
MFS_MdtG_SLC18_like cd17325
bacterial MdtG-like and eukaryotic solute carrier 18 (SLC18) family of the Major Facilitator ...
29-433 9.78e-28

bacterial MdtG-like and eukaryotic solute carrier 18 (SLC18) family of the Major Facilitator Superfamily of transporters; This family is composed of eukaryotic solute carrier 18 (SLC18) family transporters and related bacterial multidrug resistance (MDR) transporters including several proteins from Escherichia coli such as multidrug resistance protein MdtG, from Bacillus subtilis such as multidrug resistance proteins 1 (Bmr1) and 2 (Bmr2), and from Staphylococcus aureus such as quinolone resistance protein NorA. The family also includes Escherichia coli arabinose efflux transporters YfcJ and YhhS. MDR transporters are drug/H+ antiporters (DHA) that mediate the efflux of a variety of drugs and toxic compounds, and confer resistance to these compounds. The SLC18 transporter family includes vesicular monoamine transporters (VAT1 and VAT2), vesicular acetylcholine transporter (VAChT), and SLC18B1, which is proposed to be a vesicular polyamine transporter (VPAT). The MdtG/SLC18 family belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340883 [Multi-domain]  Cd Length: 375  Bit Score: 113.44  E-value: 9.78e-28
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1293418642  29 CFIIIMLDGYDAAVMGFVAPALIEDWGISRAEMGPILGAAMFGVAIGALVAGPLSDRYGRKRILLWSVALFALFSLAGAV 108
Cdd:cd17325     1 LSLALFLDMLGYGIIIPILPLYAESLGASVAQIGLIVAAYALAQLLFSPPAGRLSDRFGRKRLLLLGLLLLAVSTLLFAF 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1293418642 109 AQSPSQLALMRFLTGLGLGAVMPNCVTLVAEYMPERRKGVMITLMYSGFNVGSGLGGFIAAGLLSHYSWHSALIFGGVLP 188
Cdd:cd17325    81 ATSYWQLLLARFLQGLASAAVWPAAMALIADIAPPEERGRAMGIFSSAIGLGFLIGPLLGGLLADALGYRAPFLVCAALA 160
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1293418642 189 LVVLPFMIVMLPESAMNMvarrlpgeqiaralnrlggqftaetvfqlNAPPITRSSKVAQLFRHGYARGTIALWLTYFMG 268
Cdd:cd17325   161 LLALVLALLLLPEPRPPP-----------------------------NKRAVSAARLRSGLRLLLRDRRLLALFLAIFVL 211
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1293418642 269 LFVIYLLNGWLPTILRS-GGLSLQQAAMMTGLFQLGGPLGGILVGMLMDRASAKAVIAATYFLGCLCLLSQGLMDfGSAA 347
Cdd:cd17325   212 AFAFGALEPFLPLYAAElGGLSPAQIGLLFGAQGLASALSQPPAGKLSDRIGRKPLILIGLLLSAVALLLLPLAT-SFWL 290
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1293418642 348 LSVLIFISGMCINGAQNGLQAYSPAYYQTEIRATGVSWMHGIGRTGAILSSTLGGMLMLAVpGHSSIFLVLGLPACLAGI 427
Cdd:cd17325   291 LLLLLALLGLGLGLVFPATLALLADIVPPEGRGTAMGLFNTAFSLGMVLGPLLGGFLYDAF-GFATPFLAAAALLLLAAV 369

                  ....*.
gi 1293418642 428 CILLHR 433
Cdd:cd17325   370 LFLLLR 375
MFS cd06174
Major Facilitator Superfamily; The Major Facilitator Superfamily (MFS) is a large and diverse ...
30-430 2.81e-25

Major Facilitator Superfamily; The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of substrates including ions, sugar phosphates, drugs, neurotransmitters, nucleosides, amino acids, and peptides. They do so using the electrochemical potential of the transported substrates. Uniporters transport a single substrate, while symporters and antiporters transport two substrates in the same or in opposite directions, respectively, across membranes. MFS proteins are typically 400 to 600 amino acids in length, and the majority contain 12 transmembrane alpha helices (TMs) connected by hydrophilic loops. The N- and C-terminal halves of these proteins display weak similarity and may be the result of a gene duplication/fusion event. Based on kinetic studies and the structures of a few bacterial superfamily members, GlpT (glycerol-3-phosphate transporter), LacY (lactose permease), and EmrD (multidrug transporter), MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement. Bacterial members function primarily for nutrient uptake, and as drug-efflux pumps to confer antibiotic resistance. Some MFS proteins have medical significance in humans such as the glucose transporter Glut4, which is impaired in type II diabetes, and glucose-6-phosphate transporter (G6PT), which causes glycogen storage disease when mutated.


Pssm-ID: 349949 [Multi-domain]  Cd Length: 378  Bit Score: 106.74  E-value: 2.81e-25
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1293418642  30 FIIIMLDGYDAAVMGFVAPALIEDWGISRAEMGPILGAAMFGVAIGALVAGPLSDRYGRKRILLWSVALFALFSLAGAVA 109
Cdd:cd06174     2 LLGFFLTGLARGLISPLLPALLQSFGLSASQLGLLFALFSLGYALLQPLAGLLADRFGRRPVLLLGLLLFALGALLFAFA 81
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1293418642 110 QSPSQLALMRFLTGLGLGAVMPNCVTLVAEYMPERRKGVMITLMYSGFNVGSGLGGFIAAGLLSH--YSWHSALIFGGVL 187
Cdd:cd06174    82 PSFWLLLLGRFLLGLGSGLIDPAVLALIADLFPERERGRALGLLQAFGSVGGILGPLLGGILASSlgFGWRAVFLIAAAL 161
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1293418642 188 PLVVLPFMIVMLPESAMNMVARRLPGEQiaralnrlggqftaetvfqlnappitrSSKVAQLFRHGYARGTIALWLTYFM 267
Cdd:cd06174   162 ALLAAILLLLVVPDPPESARAKNEEASS---------------------------KSVLKLLKRVLKNPGLWLLLLAIFL 214
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1293418642 268 GLFVIYLLNGWLPTIL-RSGGLSLQQAAMMTGLFQLGGPLGGILVGMLMDRASAKAVIAATYFLGCLCLLSQGLMDFGSA 346
Cdd:cd06174   215 VNLAYYSFSTLLPLFLlDLGGLSVAVAGLLLSLFGLAGALGSLLLGLLSDRLIGRKPLLLIGLLLMALGLALLLLAPSLL 294
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1293418642 347 ALSVLIFISGMCINGAQNGLQAYSPAYYQTEIRATGVSWMHGIGRTGAILSSTLGGMLMLAVPGHSSIFLVLGLPACLAG 426
Cdd:cd06174   295 LLLLLLLLLGFGLGGLLPLSFALIAELFPPEIRGTAFGLLNTFGFLGGAIGPLLAGFLLAATFGLTGAFLVLAVLLLLAA 374

                  ....
gi 1293418642 427 ICIL 430
Cdd:cd06174   375 ILLL 378
MFS_NepI_like cd17324
Purine ribonucleoside efflux pump NepI and similar transporters of the Major Facilitator ...
48-430 4.64e-24

Purine ribonucleoside efflux pump NepI and similar transporters of the Major Facilitator Superfamily; This family is composed of purine efflux pumps such as Escherichia coli NepI and Bacillus subtilis PbuE, sugar efflux transporters such as Corynebacterium glutamicum arabinose efflux permease, multidrug resistance (MDR) transporters such as Streptomyces lividans chloramphenicol resistance protein (CmlR), and similar proteins. NepI and PbuE are involved in the efflux of purine ribonucleosides such as guanosine, adenosine and inosine, as well as purine bases like guanine, adenine, and hypoxanthine, and purine base analogs. They play a role in the maintenance of cellular purine base pools, as well as in protecting the cells and conferring resistance against toxic purine base analogs such as 6-mercaptopurine. MDR transporters are drug/H+ antiporters (DHA) that mediate the efflux of a variety of drugs and toxic compounds, and confer resistance to these compounds. The NepI-like family belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340882 [Multi-domain]  Cd Length: 370  Bit Score: 103.01  E-value: 4.64e-24
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1293418642  48 PALIEDWGISRAEMGPILGAAMFGVAIGALVAGPLSDRYGRKRILLWSVALFALFSLAGAVAQSPSQLALMRFLTGLGLG 127
Cdd:cd17324    23 PDIARDFGVSVAQAGLLVSAYALGYALGALLLGPLSDRIERRRLLLVLLLLFILGNLLAALAPSFALLLLARALAGLAHG 102
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1293418642 128 AVMPNCVTLVAEYMPERRKGVMITLMYSGFNVGSGLGGFIAAGLLSHYSWHSALIFGGVLPLVVLPFMIVMLPesamnmv 207
Cdd:cd17324   103 GFWAIAAAYAADLVPPEKRGRAIGLVFSGLTLGLVLGRPLGGLLGQLLGWRAAFLAIAVLALLAALLLWRLLP------- 175
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1293418642 208 arrlpgeqiaralnrlggqftaetvfQLNAPPITRSSKVAQLFRHGYARGTIALWLTYFMGLFVIYLLNGWLPTILRS-G 286
Cdd:cd17324   176 --------------------------SLPPKKPGSLGLLSSLLLLLRNPRLRLAYLITFLLFGGFFALYTYLAPFLTDvP 229
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1293418642 287 GLSLQQAAMMTGLFQLGGPLGGILVGMLMDRASAKAVIAAtYFLGCLCLLSQGLMDFGSAALSVLIFISGMCINGAQNGL 366
Cdd:cd17324   230 GFSSSAIIGLLLLFGVAGVVGSPLAGRLADRGGRRALLIA-LLLLAAALLLLTLLGPSPLLLLVGLVLWGLGFFAAHSAL 308
                         330       340       350       360       370       380
                  ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1293418642 367 QAYSpAYYQTEIRATGVSWMHGIGRTGAILSSTLGGMLMLAVpGHSSIFLVLGLPACLAGICIL 430
Cdd:cd17324   309 QTRV-LRLAPEARGLASSLYLAAYNLGGALGAALGGLVLDHG-GWAGVGWVGAALLLLALLLAL 370
MFS_YcxA_like cd17355
MFS-type transporter YcxA and similar proteins of the Major Facilitator Superfamily of ...
22-434 7.95e-24

MFS-type transporter YcxA and similar proteins of the Major Facilitator Superfamily of transporters; This group is composed of uncharacterized bacterial MFS-type transporters including Bacillus subtilis YcxA and YbfB. YcxA has been shown to facilitate the export of surfactin in B. subtilis. The YcxA-like group belongs to the Monocarboxylate transporter -like (MCT-like) family of the Major Facilitator Superfamily (MFS) of membrane transport proteins. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340913 [Multi-domain]  Cd Length: 386  Bit Score: 102.73  E-value: 7.95e-24
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1293418642  22 QWNVLLLCFIIIMLDGYDAAVMGFVAPALIEDWGISRAEMGPILGAAMFGVAIGALVAGPLSDRYGRKRILLWSVALFAL 101
Cdd:cd17355     1 GWVVLAVTFLILILSWGIRYYFGVFIIPIIAEFGWSRAVISLAFTVGLLAFGLAQPFVGRLLDRFGPRRVMLLGLLLLAA 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1293418642 102 FSLAGAVAQSPSQLALMRFLT-GLGLGAVMPNCVTLVAEYMPERRKGVMITLMYSGFNVGSGLGGFIAAGLLSHYSWHSA 180
Cdd:cd17355    81 GLVLLALATSLWQLYLLWGLLgGGGAGTLAAVAFATVAAWWFERRRGLALGILTAGGGLGSLVFLPLGAALIEAFGWRTA 160
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1293418642 181 LIFGGVLPLVVLPFMIVMLpesamnmvaRRLPGEQIARALNRLGGQFTAETvfqlnappitrsskVAQLFRHgyaRGTIA 260
Cdd:cd17355   161 LLVLALLALLVLVPVLLLL---------RRRPADLALRAYDDASPASPGST--------------LKEALRS---ASFWL 214
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1293418642 261 LWLTYFMGLFVIYLLNGWLPTILRSGGLSLQQAAMMTGLFQLGGPLGGILVGMLMDRASAKAVIAATYFLGCLCLLSQGL 340
Cdd:cd17355   215 LALAFFLCGFAVVGLIVHLVPYLADRGISPAAAAVALALIGLFNIVGRLLSGWLGDRYSPRRLLAASYALRALGLALLLL 294
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1293418642 341 MDFGSAALSVLIFISGMCINGAQNGLQAYSPAYYQTEIRATGVSWMHGIGRTGAILSSTLGGMLMLAVPGHSSIFLVLGL 420
Cdd:cd17355   295 LPFPPLALLLFAALFGLGWGATVPLTAALAARYFGARSYGTLFGLVFAPHQLGSALGPWLGGLLYDRTGSYTAAWALAVA 374
                         410
                  ....*....|....
gi 1293418642 421 pacLAGICILLHRM 434
Cdd:cd17355   375 ---LGLIAALLVLP 385
2A0119 TIGR00898
cation transport protein; [Transport and binding proteins, Cations and iron carrying compounds]
69-431 1.54e-23

cation transport protein; [Transport and binding proteins, Cations and iron carrying compounds]


Pssm-ID: 273328 [Multi-domain]  Cd Length: 505  Bit Score: 103.17  E-value: 1.54e-23
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1293418642  69 MFGVAIGALVAGPLSDRYGRKRILLWSVALFALFSLAGAVAQSPSQLALMRFLTGLGLGAVMPNCVTLVAEYMPERRKGV 148
Cdd:TIGR00898 137 FVGVLLGSFVFGYLSDRFGRKKVLLLSTLVTAVSGVLTAFSPNYTVFLVFRLLVGMGIGGIWVQAVVLNTEFLPKKQRAI 216
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1293418642 149 MITLMYSGFNVGSGLGGFIAAgLLSHYSWHSALIfggVLPLVVLPFMIVMLPESAMNMVARRLPGE--QIARALNRLGGQ 226
Cdd:TIGR00898 217 VGTLIQVFFSLGLVLLPLVAY-FIPDWRWLQLAV---SLPTFLFFLLSWFVPESPRWLISQGRIEEalKILQRIAKINGK 292
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1293418642 227 FTAETVFQLNAPPITRSSKVAQ----LFRHGYARG-TIALWLTYFMGLFVIYLLngwlptILRSGGL--SLQQAAMMTGL 299
Cdd:TIGR00898 293 KLPAEVLSLSLEKDLSSSKKQYsfldLFRTPNLRKtTLCLMMLWFTTAFSYYGL------VLDLGNLggNIYLDLFISGL 366
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1293418642 300 FQLggpLGGILVGMLMDRASAKAVIAATYFL-GCLCLLSQGLMDFGSAALSVLIFISGMCINGAQNGLQAYSPAYYQTEI 378
Cdd:TIGR00898 367 VEL---PAKLITLLLIDRLGRRYTMAASLLLaGVALLLLLFVPVDLYFLRTALAVLGKFGITSAFQMVYLYTAELYPTVV 443
                         330       340       350       360       370
                  ....*....|....*....|....*....|....*....|....*....|...
gi 1293418642 379 RATGVSWMHGIGRTGAILSStlggmlMLAVPGHSSIFLVLGLPACLAGICILL 431
Cdd:TIGR00898 444 RNLGVGVCSTMARVGSIISP------FLVYLGEKWLFLPLVLFGGLALLAGIL 490
MFS_SVOP cd17441
Synaptic vesicle 2-related protein (SVOP) of the Major Facilitator Superfamily; Synaptic ...
34-430 3.36e-20

Synaptic vesicle 2-related protein (SVOP) of the Major Facilitator Superfamily; Synaptic vesicle 2 (SV2)-related protein (SVOP) is a transporter-like nucleotide binding protein that localizes to neurotransmitter-containing vesicles. Like SV2, SVOP is expressed in all brain regions, with highest levels in cerebellum, hindbrain and pineal gland. Studies with knockout mice suggets that SVOP may perform a subtle function that is not necessary for survival under normal conditions, since mice lacking SVOP are viable, fertile, and phenotypically normal. SVOP shares structural similarity to the solute carrier family 22 (SLC22), a large family of organic cation and anion transporters. This SVOP subfamily belongs to the Metazoan Synaptic Vesicle Glycoprotein 2 (SV2) and related small molecule transporter family (SV2-like) of the Major Facilitator Superfamily (MFS) of membrane transport proteins. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340999 [Multi-domain]  Cd Length: 372  Bit Score: 91.80  E-value: 3.36e-20
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1293418642  34 MLDGYDAAVMGFVAPALIEDWGISRAEMGPILGAAMFGVAIGALVAGPLSDRYGRKRILLWSVALFALFSLAGAVAQSPS 113
Cdd:cd17441     9 MADAMEMMILSILAPQLHCEWRLPSWQVALLTSVVFIGMMLSSSLWGNISDQYGRKTGLKISVLWTLYYGILSAFAPIYS 88
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1293418642 114 QLALMRFLTGLGLGAVmPNCVTLVAEYMPERRKGVMITLMYSGFNVGSGLGGFIAAGLLSHYSWHSALIFGGvLPLVVLP 193
Cdd:cd17441    89 WILVLRGLVGFGIGGV-PQSVTLYAEFLPMKSRAKCILLIEVFWALGTVFEVLLAVFVMPTLGWRWLLILSA-LPLLIFA 166
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1293418642 194 FMIVMLPESAMNMVARRLPGEQIARALNRLGGQFTAETVFQlnappitrSSKVAQLFRHGYARGTIALWLTYFMGLFVIY 273
Cdd:cd17441   167 VLCFWLPESARYWTTILLWFIWFSNAFSYYGLVLLTTELFQ--------AGDVCSGSSGKKVEGKCSLECEYLTTSDYMD 238
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1293418642 274 LLngWlptilrsgglslqqaammTGLFQLGGPLGGILVgmlMDRASAKAVIAATYFLGCLCLLSQGLMdFGSAALSVLIF 353
Cdd:cd17441   239 LL--W------------------TTLSEFPGLLVTLWI---IDRFGRKKTMALCFFVFSFCTLLLFSC-VGRFSLTVLLF 294
                         330       340       350       360       370       380       390
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1293418642 354 ISGMCINGAQNGLQAYSPAYYQTEIRATGVSWMHGIGRTGAILSSTLGGMLMlavpgHSSIFLVLGLpacLAGICIL 430
Cdd:cd17441   295 IARAFISGGFQAAYVYTPEVYPTATRALGLGTCSGMARVGALITPFIAQVML-----ESSVYLTLSV---YSGCCLL 363
MFS_MMR_MDR_like cd17321
Methylenomycin A resistance protein (also called MMR peptide) and similar multidrug resistance ...
26-366 4.99e-20

Methylenomycin A resistance protein (also called MMR peptide) and similar multidrug resistance (MDR) transporters of the Major Facilitator Superfamily; This family is composed of bacterial, fungal, and archaeal multidrug resistance (MDR) transporters including several proteins from Bacilli such as methylenomycin A resistance protein (also called MMR peptide), tetracycline resistance protein (TetB), and lincomycin resistance protein LmrB, as well as fungal proteins such as vacuolar basic amino acid transporters, which are involved in the transport into vacuoles of the basic amino acids histidine, lysine, and arginine in Saccharomyces cerevisiae, and aminotriazole/azole resistance proteins. MDR transporters are drug/H+ antiporters (DHA) that mediate the efflux of a variety of drugs and toxic compounds, and confer resistance to these compounds. For example, MMR confers resistance to the epoxide antibiotic methylenomycin while TetB resistance to tetracycline by an active tetracycline efflux. MMR-like MDR transporters belong to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340879 [Multi-domain]  Cd Length: 370  Bit Score: 91.08  E-value: 4.99e-20
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1293418642  26 LLLCFIIIMLDgydAAVMGFVAPALIEDWGISRAEMGPILGAAMFGVAIGALVAGPLSDRYGRKRILLWSVALFALFSLA 105
Cdd:cd17321     1 LLLAVFLAALD---VTIVNVALPTIARDLGASPSQLQWVVNAYLLAFAALLLLAGRLGDRFGRKRVFLIGLALFGLASLL 77
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1293418642 106 GAVAQSPSQLALMRFLTGLGLGAVMPNCVTLVAEYMPERRKGVMITLMYSGFNVGSGLGGFIAAGLLSHYSWHSalIFgg 185
Cdd:cd17321    78 CALAPSLAFLIAARALQGIGAAAIMPASLALIAATFPGERRGRALGLWGAVVGIGAALGPLLGGLLLELFGWRW--IF-- 153
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1293418642 186 vlpLVVLPFMIVMLPesamnmvarrlpgeqiaralnrLGGQFTAetvfqlnappitrsskvaqlfrhgyarGTIALWLTY 265
Cdd:cd17321   154 ---LINVPIGLVALL----------------------LARTFSG---------------------------AVLAAFLLG 181
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1293418642 266 FMGLFVIYLLNGWLPTILrsgGLSLQQAAMMTGLFQLGGPLGGILVGMLMDRASAKAVIAATYFLGCLCLLsqgLMDFGS 345
Cdd:cd17321   182 AALGGLLFLLPLYLQGVL---GYSPLQAGLALLPLALAMLVAAPLAGRLADRFGPRLVLVAGLLLTAVGLL---LLALLG 255
                         330       340
                  ....*....|....*....|.
gi 1293418642 346 AALSVLIFISGMCINGAQNGL 366
Cdd:cd17321   256 ADSSVWLLLPGLVLLGLGLGL 276
MFS_arabinose_efflux_permease_like cd17473
Putative arabinose efflux permease family transporters of the Major Facilitator Superfamily; ...
70-433 1.27e-19

Putative arabinose efflux permease family transporters of the Major Facilitator Superfamily; This family includes a group of putative arabinose efflux permease family transporters, such as alpha proteobacterium quinolone resistance protein NorA (characterized Staphylococcus aureus Quinolone resistance protein NorA belongs to a different group), Desulfovibrio dechloracetivorans bacillibactin exporter, Vibrio aerogenes antiseptic resistance protein. The biological function of those transporters remain unclear. They belong to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 341026 [Multi-domain]  Cd Length: 374  Bit Score: 89.94  E-value: 1.27e-19
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1293418642  70 FGVAIGALVAGPLSDRYGRKRILLWSVALFALFSLAGAVAQSPSQLALMRFLTGLGLGAVMPNCVTLVAEYMPERRKGVM 149
Cdd:cd17473    46 LFIALFAPLAGWLADRFGRKRLLIAGLLLYGIGGVAGLFLDSLYALLASRALLGIGVAGIMTLATALIGDYFEGEERAKM 125
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1293418642 150 ITLmYSGFNVGSGLGGFIAAGLLSHYSWHSA-LIFGgvLPLVVLPFMIVMLPESAMNMVARRLPGEQIARALNRlggqft 228
Cdd:cd17473   126 LGL-QSAAMSLGGVVFLLLGGALAEIGWRAPfLVYL--LALPVLILVLLFLPEPARKSKSAASPGAATAAALPW------ 196
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1293418642 229 aetvfqlnappitrsskvaqlfrhgyaRGTIALWLTYFMGLFVIYLLNGWLPTILRS-GGLSLQQAAMMTGLFQLGGPLG 307
Cdd:cd17473   197 ---------------------------KRVLPIYFLAFLAMLLFYVIPIQLPFLLQErGGGSAALIGLALAIASLAGAIG 249
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1293418642 308 GILVGMLMDRASAKAVIAATYFLGCLCLLsqglmdFGSAALSVLIFISGMCINGAQNGL-----QAYSPAYYQTEIRATG 382
Cdd:cd17473   250 ALLFGRLKRRLGKRRLLAIGFALMALGFL------LLALASGLWVVLLGAILAGLGFGLllptlNSWAMSLVPPELRGRA 323
                         330       340       350       360       370
                  ....*....|....*....|....*....|....*....|....*....|.
gi 1293418642 383 VSWMHGIGRTGAILSSTLGGMLMLAVPGHSSIFLVLGLPACLAGICILLHR 433
Cdd:cd17473   324 MGIVTSAFFLGQFLSPLVLGPLVNLTGGLSGAFLILGVLALVLAIVLLLLR 374
MFS_SVOP_like cd17372
Synaptic vesicle 2-related protein (SVOP) and related proteins of the Major Facilitator ...
34-424 3.41e-19

Synaptic vesicle 2-related protein (SVOP) and related proteins of the Major Facilitator Superfamily; This subfamily is composed of synaptic vesicle 2 (SV2)-related protein (SVOP), SVOP-like protein (SVOPL), and similar proteins. SVOP is a transporter-like nucleotide binding protein that localizes to neurotransmitter-containing vesicles. Like SV2, SVOP is expressed in all brain regions, with highest levels in cerebellum, hindbrain and pineal gland. Studies with knockout mice suggets that SVOP may perform a subtle function that is not necessary for survival under normal conditions, since mice lacking SVOP are viable, fertile, and phenotypically normal. SVOP and SVOPL share structural similarity to the solute carrier family 22 (SLC22), a large family of organic cation and anion transporters. The SVOP-like subfamily belongs to the Metazoan Synaptic Vesicle Glycoprotein 2 (SV2) and related small molecule transporter family (SV2-like) of the Major Facilitator Superfamily (MFS) of membrane transport proteins. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340930 [Multi-domain]  Cd Length: 367  Bit Score: 88.75  E-value: 3.41e-19
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1293418642  34 MLDGYDAAVMGFVAPALIEDWGISRAEMGPILGAAMFGVAIGALVAGPLSDRYGRKRILLWSVALFALFSLAGAVAQSPS 113
Cdd:cd17372     9 VAEAMEMMLLSFVGPAVQCEWNLSAWQVALITSVVFAGMMIGSYLWGIVSDKYGRRKGLIISALWTFYAGFLSAFAPNYM 88
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1293418642 114 QLALMRFLTGLGLGAVmPNCVTLVAEYMPERRKGVMITLMYSGFNVGSGLGGFIAAGLLSHYSWHSALIFGGVlplvvlp 193
Cdd:cd17372    89 WLIILRCLVGLGLGGG-PQLASWYLEFLPAKSRGTWMVLFSVFWTVGTIFEASLAWLVMPRLGWRWLLAFSSV------- 160
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1293418642 194 fmivmlPESAMNMVARRLPGEQIARALNRLGGQFTAETVFQLNAPPITRSSKVAQLFRHGYARGTIALWLTYFmglfviy 273
Cdd:cd17372   161 ------PSSLLLVFYRWTPKTTLLLWVIWFGNAFAYYGVVLLTTELNNSHNVCGSKSDSDSGESPTEKQCRNS------- 227
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1293418642 274 llngwlptilrsgglslQQAAMMTGLFQLGGPLGGILVGMLM-DRASAKAVIAATYFLGCLCLLSQgLMDFGSAALSVLI 352
Cdd:cd17372   228 -----------------NDVDYRDVFIATFAEFPGLLISAAMiDRLGRKASMASMLFTCCIFLLLL-LICQSPFILTVLL 289
                         330       340       350       360       370       380       390
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1293418642 353 FISGMCINGAQNGLQAYSPAYYQTEIRATGVSWMHGIGRTGAILSSTLGGMLM-----LAVPGHSSIFLVLGLPACL 424
Cdd:cd17372   290 FGGRACISAAFTVVYIYTPEVYPTAVRALGVGTGSSVGRIGAILCPFIAQVLVhgsqtIALLLFSVVCLVSAICVCL 366
FucP COG0738
Fucose permease [Carbohydrate transport and metabolism];
19-438 4.05e-19

Fucose permease [Carbohydrate transport and metabolism];


Pssm-ID: 440501 [Multi-domain]  Cd Length: 391  Bit Score: 88.76  E-value: 4.05e-19
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1293418642  19 SRFQWNVLLLCFIIIMLDGYDAAVMGFVAPALIEDWGISRAEMGPILGAAMFGVAIGALVAGPLSDRYGRKRILLWSVAL 98
Cdd:COG0738     3 KKNYRRALIAIYLLFFLWGFATALWGPLIPALKDAFGLSDAQAGLLLFAFFLGYLLASLPAGRLIDRFGYKRGLLLGLLL 82
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1293418642  99 FALFSLAGAVAQSPSQLALMRFLTGLGLGAVMPNCVTLVAEYMPERRKGVMiTLMYSGFNVGSGLGGFIAAgllshyswh 178
Cdd:COG0738    83 MALGLLLFALAPSYPLLLLALFLLGLGLGLLDVAANPYVAALGPETAASRL-NLLHAFFSLGALLGPLLGG--------- 152
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1293418642 179 sALIFGGVLPLVVLPFMIVMLPESAMNMVARRLPGEQIARAlnrlggqftaetvfqlNAPPITRSSKVAQLFRHgyaRGT 258
Cdd:COG0738   153 -LLILLGLSLSWHLPYLILAVLLLLLALLFLRSKLPEIEEE----------------EEEAAGSAASLKSLLKN---PRL 212
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1293418642 259 IALWLTYFMGLFVIYLLNGWLPTILRSG-GLSLQQAAMMTGLFQLGGPLGGILVGMLMDRASAKAVIAATYFLGCLCLLs 337
Cdd:COG0738   213 LLGGLAIFLYVGAEGAIGDWLPLYLKDVlGLSEATAALGLSLFWGGMTIGRFLGGFLLKRFGPVRLLRLSALLAAVGLL- 291
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1293418642 338 qGLMDFGSAALSVL-IFISGMCINGAQNGLQAYSPAYYQTEiRATGVSWMHGIGRTGAILSSTLGGMLMLAVPGHSSIFL 416
Cdd:COG0738   292 -LALLAPGPWLALIgLALVGLGLSLMFPTIFSLALDGLGKR-TAAAVSAVLIMGIVGGAIGPPLIGFLADAFGLRAAFLV 369
                         410       420
                  ....*....|....*....|..
gi 1293418642 417 VLGLPACLAGICILLHRMNHAK 438
Cdd:COG0738   370 PLVCYLLILLLALALKRKRRKK 391
MFS_XylE_like cd17359
D-xylose-proton symporter and similar transporters of the Major Facilitator Superfamily; This ...
37-202 1.26e-18

D-xylose-proton symporter and similar transporters of the Major Facilitator Superfamily; This subfamily includes bacterial transporters such as D-xylose-proton symporter (XylE or XylT), arabinose-proton symporter (AraE), galactose-proton symporter (GalP), major myo-inositol transporter IolT, glucose transport protein, putative metabolite transport proteins YfiG, YncC, and YwtG, and similar proteins. The symporters XylE, AraE, and GalP facilitate the uptake of D-xylose, arabinose, and galactose, respectively, across the boundary membrane with the concomitant transport of protons into the cell. IolT is involved in polyol metabolism and myo-inositol degradation into acetyl-CoA. The XylE-like subfamily belongs to the Glucose transporter -like (GLUT-like) family of the Major Facilitator Superfamily (MFS) of membrane transport proteins. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340917 [Multi-domain]  Cd Length: 383  Bit Score: 87.24  E-value: 1.26e-18
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1293418642  37 GYDAAVMGFVAPALIEDWGISRAEMGPILGAAMFGVAIGALVAGPLSDRYGRKRILLWSVALFALFSLAGAVAQSPSQLA 116
Cdd:cd17359    14 GYDTGVINGALPFLQTDFNLTPFLEGLVVSSALLGAAIGALFAGRLADRFGRRKTLLISAVLFFISALGSAFSPNFTIFI 93
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1293418642 117 LMRFLTGLGLGAVMPNCVTLVAEYMPERRKGVMITLmYSGFNVGSGLGGFIAAGLLSHYSWHSALIFGG--------VLP 188
Cdd:cd17359    94 IARIIGGLAVGGASALVPMYIAEVAPAEIRGRLVSL-NQLMIVFGQLLAYIVNYLIANAGGADWLGAEGwrwmlgleAIP 172
                         170
                  ....*....|....
gi 1293418642 189 LVVLPFMIVMLPES 202
Cdd:cd17359   173 AILFLLGMLFIPES 186
2A0104 TIGR00881
phosphoglycerate transporter family protein; [Transport and binding proteins, Carbohydrates, ...
30-368 1.57e-18

phosphoglycerate transporter family protein; [Transport and binding proteins, Carbohydrates, organic alcohols, and acids]


Pssm-ID: 273319 [Multi-domain]  Cd Length: 379  Bit Score: 87.05  E-value: 1.57e-18
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1293418642  30 FIIIMLDGYDAAVMGFVAPALIEDWGISRAEMGPILGAAMFGVAIGALVAGPLSDRYGRKRILLWSVALFALFSLAGAVA 109
Cdd:TIGR00881   1 FIGYAAYYLVRKNFALAMPYLVEEIGLSKTDLGLLLSSFSIAYGISKFVMGSVSDRSNPRVFLPIGLILCAIVNLFFGFS 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1293418642 110 QSPSQLALMRFLTGLGLGAVMPNCVTLVAEYMPERRKGVMITLMYSGFNVGSGLG-GFIAAGLLSHYSWHSALIFGGVLP 188
Cdd:TIGR00881  81 TSLWVMAALWALNGIFQGMGWPPCGRTVTKWFSRSERGTWVSFWNCSHNVGGGLLpPLVLFGIAELYSWHWVFIVPGIIA 160
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1293418642 189 LVVLPFMIVML---PESAMNMVARRLPGEQIARALNRLGGQFTAETVFQlnappitrsskvaqlfrhGYARGTIALWLTY 265
Cdd:TIGR00881 161 IIVSLICFLLLrdsPQSCGLPPAEEMPNEEPDGDAEKKEEELTKKQIFL------------------QYVLLNKVLWYIS 222
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1293418642 266 FMGLFVIYLLNG---WLPTIL-RSGGLSLQQAAMMTGLFQLGGPLGGILVGMLMDR--ASAKAVIAATYFLGCLCLLSQG 339
Cdd:TIGR00881 223 LGYVFVYVVRTGildWSPLYLtQEKGFSKEKASWAFTLYELGGLVGTLLAGWLSDKlfNGRRGPLAVFFMALIIVSLLVY 302
                         330       340       350
                  ....*....|....*....|....*....|...
gi 1293418642 340 LMDFGSAALSVLI--FISGMCINGAQN--GLQA 368
Cdd:TIGR00881 303 WLNPAANPLMDLIclFALGFLVYGPQMliGVIA 335
synapt_SV2 TIGR01299
synaptic vesicle protein SV2; This model describes a tightly conserved subfamily of the larger ...
20-202 9.81e-18

synaptic vesicle protein SV2; This model describes a tightly conserved subfamily of the larger family of sugar (and other) transporters described by pfam00083. Members of this subfamily include closely related forms SV2A and SV2B of synaptic vesicle protein from vertebrates and a more distantly related homolog (below trusted cutoff) from Drosophila melanogaster. Members are predicted to have two sets of six transmembrane helices.


Pssm-ID: 130366 [Multi-domain]  Cd Length: 742  Bit Score: 85.80  E-value: 9.81e-18
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1293418642  20 RFQWNVLLLCFIIIMLDGYDAAVMGFVAPALIEDWGISRAEMGPILGAAMFGVAIGALVAGPLSDRYGRKRILLWSVALF 99
Cdd:TIGR01299 163 RFQWALFFVLGLALMADGVEVFVVGFVLPSAEKDLCIPDSGKGMLGLIVYLGMMVGAFFWGGLADKLGRKQCLLICLSVN 242
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1293418642 100 ALFSLAGAVAQSPSQLALMRFLTGLGLGAVMPNCVTLVAEYMPERRKGVMITLMYSGFNVGSGLGGFIAAGLLSHYSW-- 177
Cdd:TIGR01299 243 GFFAFFSSFVQGYGFFLFCRLLSGFGIGGAIPIVFSYFAEFLAQEKRGEHLSWLCMFWMIGGIYAAAMAWAIIPHYGWsf 322
                         170       180       190
                  ....*....|....*....|....*....|....*
gi 1293418642 178 --------HSALIFGGV--LPLVVLPFMIVMLPES 202
Cdd:TIGR01299 323 qmgsayqfHSWRVFVIVcaFPCVFAIGALTFMPES 357
MFS_SLC17A9_like cd17380
Solute carrier family 17 member 9 and similar proteins of the Major Facilitator Superfamily of ...
27-200 2.38e-17

Solute carrier family 17 member 9 and similar proteins of the Major Facilitator Superfamily of transporters; This subfamily includes solute carrier family 17 member 9 (SLC17A9) and similar proteins including plant inorganic phosphate transporters (PHT4) that are also probably anion transporters. SLC17A9, also called vesicular nucleotide transporter (VNUT), is involved in vesicular storage and exocytosis of ATP. It facilitates the accumulation of ATP and other nucleotides in secretory vesicles such as adrenal chromaffin granules and synaptic vesicles. It also functions as a lysosomal ATP transporter and regulates cell viability. Plant PHT4 family transporters mediate the transport of inorganic phosphate and may also transport organic anions. The Arabidopsis protein AtPHT4;4 is a chloroplast-localized ascorbate transporter. PHT4 proteins show differential expression that suggests specialized functions. The SLC17A9-like subfamily belongs to the Solute carrier 17 (SLC17) family of the Major Facilitator Superfamily (MFS) of membrane transport proteins. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340938 [Multi-domain]  Cd Length: 361  Bit Score: 82.99  E-value: 2.38e-17
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1293418642  27 LLCFIIIMLDGYDAAVMGFVAPALIEDWGISRAEMGPILGAAMFGVAIGALVAGPLSDRYGRKRILLWSVALFALFSLAG 106
Cdd:cd17380     2 ILLFLATCICYADRVNMPIAIVPMAKEFGWSKTDQGLVLSSFFWGYALTQVLGGYLADRFGGKKVLLLAVALWSLATLLT 81
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1293418642 107 AVAQSPSQLALM--RFLTGLGLGAVMPNCVTLVAEYMPERRKGVMITLMYSGFNVGSGLGGFIAAGLLSHYSWHSALIFG 184
Cdd:cd17380    82 PLLAYSSLPLLIlsRILLGLGEGVHFPSMTSLFSRWVPVSERSRAVSIVTAGSYLGTLLGGLIGPLLLEYYGWPSVFYFF 161
                         170
                  ....*....|....*.
gi 1293418642 185 GVLPLVVLPFMIVMLP 200
Cdd:cd17380   162 GLLGLLWALVWLIYLP 177
PRK12307 PRK12307
MFS transporter;
18-417 2.45e-17

MFS transporter;


Pssm-ID: 237051 [Multi-domain]  Cd Length: 426  Bit Score: 83.82  E-value: 2.45e-17
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1293418642  18 VSRFQWNVLLLCFIIIMLDGYDAAVMGFVAPALIEDWGISRAEMGPILGAAMFGVAIGALVAGPLSDRYGRKRILLWSVA 97
Cdd:PRK12307   12 ITRPQKNALFSAWLGYVFDGFDFMLIFYIMYLIKADLGLTDMEGAFLATAAFIGRPFGGALFGLLADKFGRKPLMMWSIV 91
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1293418642  98 LFALFSLAGAVAQSPSQLALMRFLTGLGLGAVMPNCVTLVAEYMPERRKGVMITLMYSGFNVGSGLGGFIAAGLLSHYSW 177
Cdd:PRK12307   92 AYSVGTGLSGLASGVIMLTLSRFIVGMGMAGEYACASTYAVESWPKHLKSKASAFLVSGFGIGNIIAAYFMPSFAEAYGW 171
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1293418642 178 HSALiFGGVLPLVVLPFMIVMLPESAmnmvarrlpgEQIARALNRLGGQF-TAETVFQLNappitrsskVAQLFRHGYAR 256
Cdd:PRK12307  172 RAAF-FVGLLPVLLVIYIRARAPESK----------EWEEAKLSGKGKHSqSAWSVFSLS---------MKGLFNRAQFP 231
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1293418642 257 GTIALWLTYFMGLFVIYLLNGWLPTILRSGGLSLQQAAMMTGLFQLGGPLGGILVGMLMDRASAKAVIAATYFLGCLCLL 336
Cdd:PRK12307  232 LTLCVFIVLFSIFGANWPIFGLLPTYLAGEGFDTGVVSNLMTAAAFGTVLGNIVWGLCADRIGLKKTFSIGLLMSFLFIF 311
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1293418642 337 SQGLMDFGSAALSVLIFISGMCINGAQNGL-QAYSPAYYQTEIRATGVSWMHGIGRTGAILSSTLGGMLMLAVPGHSSIF 415
Cdd:PRK12307  312 PLFRIPQDNYLLLGACLFGLMATNVGVGGLvPKFLYDYFPLEVRGLGTGLIYNLAATSGTFNSMAATWLGITMGLGAALT 391

                  ..
gi 1293418642 416 LV 417
Cdd:PRK12307  392 FI 393
MFS_MMR_MDR_like cd17504
Methylenomycin A resistance protein (also called MMR peptide)-like multidrug resistance (MDR) ...
31-366 4.54e-17

Methylenomycin A resistance protein (also called MMR peptide)-like multidrug resistance (MDR) transporters of the Major Facilitator Superfamily; This subfamily is composed of putative multidrug resistance (MDR) transporters including Chlamydia trachomatis antiseptic resistance protein QacA_2, and Serratia sp. DD3 Bmr3. MDR transporters are drug/H+ antiporters (DHA) that mediate the efflux of a variety of drugs and toxic compounds, and confer resistance to these compounds. This subfamily belongs to the Methylenomycin A resistance protein (also called MMR peptide) and similar multidrug resistance (MDR) transporters (MMR-like MDR transporter) family of the Major Facilitator Superfamily (MFS) of transporters. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 341047 [Multi-domain]  Cd Length: 371  Bit Score: 82.24  E-value: 4.54e-17
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1293418642  31 IIIMLDGYDAAVMGFVAPALIEDWGISRAEMGPILGAAMFGVAIGALVAGPLSDRYGRKRILLWSVALFALFSLAGAVAQ 110
Cdd:cd17504     3 LAALAVMLVETMLSPALPTIQREFGTSAAAVSWVLTAYLLVGAVSTPILGRLGDLYGRKKVLLIVLAIYTAGSLLAAFAP 82
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1293418642 111 SPSQLALMRFLTGLGlGAVMPNCVTLVAEYMPERRKGVMITLMYSGFNVGSGLGGFIAAGLLSHYSWHSALIFGGVLPLV 190
Cdd:cd17504    83 NLPVLIAGRALQGIG-GAVFPLAFALVREEFPPERVPVAQGILSATFGIGAGIGLPLGGWIVQHLGWRWIFWTAAPVAVL 161
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1293418642 191 vlpfMIVMLPESAMNMVARrlpgeqiaralnrlggqftaetvfqlnappitrsskvaqlfrhgyaRGTIALWLTYFMGLF 270
Cdd:cd17504   162 ----LAALVPLIDLRLLRR----------------------------------------------RNVLLANITALLAGF 191
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1293418642 271 VIYLLNGWLPTILRS-----GGLSLQQAAMMTGLFQLGGPLGGILVGMLMDRASAKAVIAATYFLGCLCLLSQGLMDFGS 345
Cdd:cd17504   192 GMFMVFQLLPQLLQLptptgFGLGITEAGLLLLPGALVMLIAGPLAGRLIARVGPRRVLLIGLVISAVGLLLLALLHSSL 271
                         330       340
                  ....*....|....*....|.
gi 1293418642 346 AALSVLIFISGMCINGAQNGL 366
Cdd:cd17504   272 WALVVALLLIGIGLGLAFASL 292
MFS_Tpo1_MDR_like cd17323
Yeast Polyamine transporter 1 (Tpo1) and similar multidrug resistance (MDR) transporters of ...
25-199 6.42e-17

Yeast Polyamine transporter 1 (Tpo1) and similar multidrug resistance (MDR) transporters of the Major Facilitator Superfamily; This family is composed of fungal multidrug resistance (MDR) transporters including several proteins from Saccharomyces cerevisiae such as polyamine transporters 1-4 (Tpo1-4), quinidine resistance proteins 1-3 (Qdr1-3), dityrosine transporter 1 (Dtr1), fluconazole resistance protein 1 (Flr1), and protein HOL1. MDR transporters are drug/H+ antiporters (DHA) that mediate the efflux of a variety of drugs and toxic compounds, and confer resistance to these compounds. For example, Flr1 confers resistance to the azole derivative fluconazole while Tpo1 confers resistance and adaptation to quinidine and ketoconazole. The polyamine transporters are involved in the detoxification of excess polyamines in the cytoplasm. Tpo1-like MDR transporters belong to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340881 [Multi-domain]  Cd Length: 376  Bit Score: 81.85  E-value: 6.42e-17
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1293418642  25 VLLLCFIIiMLDGYDAAVMGFVAPALIEDWGISRAEMGPILGAAMFGVAIGALVAGPLSDRYGRKRILLWSVALFALFSL 104
Cdd:cd17323     1 VFIISFLT-FVVTFGSSIYSPALPQIAEDFHVSEEVANLGVSLFVLGFGLGPLIWAPLSELYGRRPVYLVSLFIFVIFQI 79
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1293418642 105 AGAVAQSPSQLALMRFLTGLGLGAVMPNCVTLVAEYMPERRKGVMITLMYSGFNVGSGLGGFIAAGLLSHYSWHS----A 180
Cdd:cd17323    80 GCALAPNIAMLIILRFLQGFFGSSPLAIGAGTIADLFTPEERGKAMGVYSLGPLLGPALGPIIGGFITQSLGWRWifwfL 159
                         170
                  ....*....|....*....
gi 1293418642 181 LIFGGVLPLVVLPFMIVML 199
Cdd:cd17323   160 AIISGFCLILIFLFLPIVL 178
UhpC COG2271
Sugar phosphate permease [Carbohydrate transport and metabolism];
23-201 1.78e-16

Sugar phosphate permease [Carbohydrate transport and metabolism];


Pssm-ID: 441872 [Multi-domain]  Cd Length: 363  Bit Score: 80.68  E-value: 1.78e-16
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1293418642  23 WNVLLLCFIIIMLDGYDAAVMGFVAPALIEDWGISRAEMGPILGAAMFGVAIGALVAGPLSDRYGR--KRILLWSVALFA 100
Cdd:COG2271   180 LRFWLLALAYFLVYFALYGFLTWLPTYLVEVRGLSLAQAGLLLSLPFLAGIVGSLLGGWLSDRLGRrrKLVLAIGLLLAA 259
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1293418642 101 LFSLAGAVAQSPSQLALMRFLTGLGLGAVMPNCVTLVAEYMPERRKGVMITLMYSGFNVGSGLGGFIAAGLLSHYSWHSA 180
Cdd:COG2271   260 LALLLLALLPSPALAIALLFLAGFGLGGAFGLLWALAAELFPKKARGTASGLVNTFGFLGGALGPLLVGYLLDATGYQAA 339
                         170       180
                  ....*....|....*....|.
gi 1293418642 181 LIFGGVLPLVVLPFMIVMLPE 201
Cdd:COG2271   340 FLLLAALALLAALLALLLLRE 360
MFS_spinster_like cd17328
Protein spinster and spinster homologs of the Major Facilitator Superfamily of transporters; ...
25-354 4.29e-16

Protein spinster and spinster homologs of the Major Facilitator Superfamily of transporters; The protein spinster family includes Drosophila protein spinster, its vertebrate homologs, and similar proteins. Humans contain three homologs called protein spinster homologs 1 (SPNS1), 2 (SPNS2), and 3 (SPNS3). Protein spinster and its homologs may be sphingolipid transporters that play central roles in endosomes and/or lysosomes storage. SPNS2 is also called sphingosine 1-phosphate (S1P) transporter and is required for migration of myocardial precursors. S1P is a secreted lipid mediator that plays critical roles in cardiovascular, immunological, and neural development and function. The spinster-like family belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340886 [Multi-domain]  Cd Length: 405  Bit Score: 79.97  E-value: 4.29e-16
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1293418642  25 VLLLCFIIIM--LDGYDAAVmgfVAPALIEDWGISRAEMGPILGAAMFGVAIGALVAGPLSDRYGRKRILLWSVALFALF 102
Cdd:cd17328     1 VAVLFLINLLnyMDRFTIAG---VLPDIQSDFLIDDSLAGLLQTVFIISYMVLSPIFGYLGDRYNRKWILAVGILIWSAA 77
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1293418642 103 SLAGAVAQSPSQLALMRFLTGLGLGAVMPNCVTLVAEYMPERRKGVMITLMYSGFNVGSGLgGFIAAGLLSH--YSWHSA 180
Cdd:cd17328    78 TLLSSFAPNFWQLLLFRALVGIGEASYSPIAPTIIADLFPKEKRTRALGVFYFAIPLGSGL-GYVVGGLVAQatGGWRWA 156
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1293418642 181 LIFGGVLPLVVLPFMIVMLPEsamnmvARRLPGEQIARALNRLGGqFTAETVFQLNAPPITRSSkvaqlfrhgyargtia 260
Cdd:cd17328   157 FRVTGVLGVLLAILLLLFVRE------PPRGAAEGGVMAKSTATS-FLADLKALAKNPSFILST---------------- 213
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1293418642 261 lwLTYFMGLFVIYLLNGWLPT-ILRSGGLSLQQAAMMTGLFQL----GGPLGGILVGMLMDRASAK-----AVIAATYFL 330
Cdd:cd17328   214 --LGFTAVSFVTGALAFWAPTfFLRAFGVGDLSSADVGLIFGAitciAGVLGVLLGGILADRLRRKtpradPLVCAVGLL 291
                         330       340
                  ....*....|....*....|....
gi 1293418642 331 GCLCLLSQGLMDFGSAALSVLIFI 354
Cdd:cd17328   292 AAAPFLFLALVLALSNLLLAWVLL 315
PRK03893 PRK03893
putative sialic acid transporter; Provisional
16-404 4.82e-16

putative sialic acid transporter; Provisional


Pssm-ID: 179668 [Multi-domain]  Cd Length: 496  Bit Score: 80.13  E-value: 4.82e-16
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1293418642  16 RPVSRFQWNVLLLCFIIIMLDGYDAAVMGFVAPALIEDWGISRAEMGPILGAAMFGVAIGALVAGPLSDRYGRKRILLWS 95
Cdd:PRK03893   12 RHLNRAQWKAFSAAWLGYLLDGFDFVLITLVLTEVQGEFGLTTVQAASLISAAFISRWFGGLLLGAMGDRYGRRLAMVIS 91
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1293418642  96 VALFALFSLAGAVAQSPSQLALMRFLTGLGLGAVMPNCVTLVAEYMPERRKGVMITLMYSGFNVGSGLGGFIAAGLLSHY 175
Cdd:PRK03893   92 IVLFSVGTLACGFAPGYWTLFIARLVIGMGMAGEYGSSATYVIESWPKHLRNKASGFLISGFSIGAVVAAQVYSLVVPVW 171
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1293418642 176 SWHsALIFGGVLPLVVLPFMIVMLPESA------------MNMVARRLPGEqiARALNRLGGQFTAETVFQLNAPPITRS 243
Cdd:PRK03893  172 GWR-ALFFIGILPIIFALWLRKNLPEAEdwkekhagkapvRTMVDILYRGE--HRIINILLTLAAAAALWFCFAGNLQNA 248
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1293418642 244 SKVAQL-------FRHGYARGTIALWLTYFMGLFVIYL--LNGW-----LPTILRSG-GLSLQQAAMMTGLFQLGGPLGG 308
Cdd:PRK03893  249 AIVAVLgllcaaiFISFMVQSSGKRWPTGVMLMVVVLFafLYSWpiqalLPTYLKTDlGYDPHTVANVLFFSGFGAAVGC 328
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1293418642 309 ILVGMLMDRASAKAVIAATYFLGCLCLLSQGLMDFGSAA-LSVLIFISGMCINGAQNGLQAYSPAYYQTEIRATGVSWMH 387
Cdd:PRK03893  329 CVGGFLGDWLGTRKAYVCSLLISQLLIIPVFAIGGANVWvLGLLLFFQQMLGQGISGLLPKLIGGYFDTEQRAAGLGFTY 408
                         410
                  ....*....|....*..
gi 1293418642 388 GIGRTGAILSSTLGGML 404
Cdd:PRK03893  409 NVGALGGALAPILGALI 425
MFS_YfmO_like cd17474
Bacillus subtilis multidrug efflux protein YfmO and similar transporters of the Major ...
48-434 1.03e-15

Bacillus subtilis multidrug efflux protein YfmO and similar transporters of the Major Facilitator Superfamily; This family is composed of Bacillus subtilis multidrug efflux protein YfmO, bacillibactin exporter YmfD/YmfE, uncharacterized MFS-type transporter YvmA, and similar proteins. YfmO acts to efflux copper or a copper complex, and could contribute to copper resistance. YmfD/YmfE is involved in secretion of bacillibactin. The YfmO-like family belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 341027 [Multi-domain]  Cd Length: 374  Bit Score: 78.38  E-value: 1.03e-15
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1293418642  48 PALIEDWGISRAEMGPILGAAMFGVAIGALVAGPLSDRYGRKRILLWSVALFALFSLAGAVAQSPSQLALMRFLTGLGLG 127
Cdd:cd17474    23 PAIAEALGASPAQVGLLITAFTLPAAVLMPVAGVLADRFGRKKVLLPGLLLFGIGGLLCGLSDSFALLLAGRALQGIGAA 102
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1293418642 128 AVMPNCVTLVAEYMP--ERRKGVMITLMYSGFNVGSG--LGGFIAAgllshYSWHSALIFGGVLPLVVLPFMIVMLPESA 203
Cdd:cd17474   103 GLGPLALTLIGDLFEggERAKAMGLYEAALGLGIAVGplLGGLLAA-----ISWRYPFFLLAALIPVAFLAILFLLPEPK 177
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1293418642 204 MNMVarrlpgeqiaralnrlggqftaetvfqlnAPPITRSSKVAQLFRHGYARGTIALWLTYFMGLFVIYllnGWLPTIL 283
Cdd:cd17474   178 EKAK-----------------------------SSSATKLRDLKKALRGRGLLTFLVSAFLYFFLYFAFL---TYLPFLL 225
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1293418642 284 rsgGLSLQQAAMMTGLFQLGGPLGGILVGMLMDRASAKAVIAATYFLGCLCLLSQGLMDFGSA----ALSVLIFISGMCI 359
Cdd:cd17474   226 ---ELLYGISPIIIGLLFAGWSVLLALGSLFVGRLLKKRFGARRILVIGLLLYALSLLLLGFVpslaLLLIAIVLFGLGL 302
                         330       340       350       360       370       380       390
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1293418642 360 NGAQNGLQAYSPAYYQTEIRATGVSWMHGIGRTGAILSSTLGGMLMLAVpGHSSIFLVLGlpACLAGICILLHRM 434
Cdd:cd17474   303 GLNLPLLTTLVTELAPEEERGTASSLYNFVRFLGQAVGPLLFGLLLEIF-GLSAPFLVGA--AIALAAAVLLALL 374
Sugar_tr pfam00083
Sugar (and other) transporter;
28-202 1.05e-15

Sugar (and other) transporter;


Pssm-ID: 395036 [Multi-domain]  Cd Length: 452  Bit Score: 78.85  E-value: 1.05e-15
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1293418642  28 LCFIIIM---LDGYDAAVMGFVAPALI----EDWGISRAE-------MGPILGAAMFGVAIGALVAGPLSDRYGRKRILL 93
Cdd:pfam00083   1 VALVAALggfLFGYDTGVIGAFLTLIDffknFGLSKSVSSlaalsvlSGLIVSIFSVGCFIGSLFAGKLGDRFGRKKSLL 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1293418642  94 WSVALF---ALFSLAGAVAQSPSQLALMRFLTGLGLGAVMPNCVTLVAEYMPERRKGVMITLmysgFNVGSGLGGFIAAG 170
Cdd:pfam00083  81 IANVLFvigAVLQGAAKGKWSVYQLIVGRVLVGIGVGGASVLAPMYISEIAPKKLRGALGSL----YQLAITFGILLAYI 156
                         170       180       190
                  ....*....|....*....|....*....|....*....
gi 1293418642 171 L---LSHYS----WHSALIFGGVLPLVVLPFMiVMLPES 202
Cdd:pfam00083 157 FglgLNKTSnsdgWRIPLGLQLVPALLLIIGL-LFLPES 194
MFS_SV2 cd17363
Synaptic vesicle glycoprotein 2 of the Major Facilitator Superfamily of transporters; Synaptic ...
33-402 1.14e-15

Synaptic vesicle glycoprotein 2 of the Major Facilitator Superfamily of transporters; Synaptic vesicle glycoprotein 2 (SV2) is a transporter-like integral membrane glycoprotein, with 12 transmembrane regions, expressed in vertebrates and is localized to synaptic and endocrine secretory vesicles. Three isoforms have been identified, SV2A, SV2B, and SV2C. SV2A and SV2B are widely expressed in the brain, while SV2C is more restricted to evolutionarily older brain. SV2 isoforms have been shown to be critical for the proper function of the central nervous system. SV2 serves as the receptor for botulinum neurotoxin A (BoNT/A), one of seven neurotoxins produced by the bacterium Clostridium botulinum. BoNT/A blocks neurotransmitter release by cleaving synaptosome-associated protein of 25 kD (SNAP-25) within presynaptic nerve terminals. The SV2 family belongs to the Metazoan Synaptic Vesicle Glycoprotein 2 (SV2) and related small molecule transporter family (SV2-like) of the Major Facilitator Superfamily (MFS) of membrane transport proteins. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340921 [Multi-domain]  Cd Length: 474  Bit Score: 79.07  E-value: 1.14e-15
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1293418642  33 IMLDGYDAAVMGFVAPALIEDWGISRAEMGPILGAAMFGVAIGALVAGPLSDRYGRKRILLWSVALFALFSLAGAVAQSP 112
Cdd:cd17363     8 LMADGVEVFVVGFVLPSAEKDMCLSNSNKGMLGLIVYLGMMVGAFVWGGLADKLGRKQCLLIALSVNGVFAFLSSFVQGY 87
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1293418642 113 SQLALMRFLTGLGLGAVMPNCVTLVAEYMPERRKGVMITLMYSGFNVGSGLGGFIAAGLLSHYSW----------HSALI 182
Cdd:cd17363    88 GFFLFCRLLSGIGIGGSIPIVFSYFAEFLAREKRGEHLSWLCMFWMIGGLYASAMAWAIIPHYGWgfsmgtayqfHSWRV 167
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1293418642 183 FGGV--LPLVVLPFMIVMLPESAMNM--VARRLPGEQIARALN--RLGGQFTAETVFQLNAppITRsskvaqlfrhgyaR 256
Cdd:cd17363   168 FVIVcaLPSVASVVALTFMPESPRFLleVGKHDEAWMILKQVHdtNMRAKGHPERVFTVSH--IKR-------------M 232
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1293418642 257 GTIALWLTYFMGLFVIYLLNGWLPTILR---------------------------------------------------- 284
Cdd:cd17363   233 NTLFLAIVWFTMSFSYYGLTVWFPDMIKylqfedslfeecyfedvtstntffenctfintvfyntdlfeykfidsrflns 312
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1293418642 285 ------SGGLSL---QQAAMMTGLFQLGGPL----GGILVGMLMDRASAKAVIAATYFLGCLCLLSQGLMDFGSAALSVL 351
Cdd:cd17363   313 tfflkeKCGCHLnddEENAYLIYLVSFLGSLsvlpGNIVSALLMDKIGRLKMIGGSMLLSAVCCFFLFFGNSESAMIGLQ 392
                         410       420       430       440       450
                  ....*....|....*....|....*....|....*....|....*....|.
gi 1293418642 352 IFISGMCInGAQNGLQAYSPAYYQTEIRATGVSWMHGIGRTGAILSSTLGG 402
Cdd:cd17363   393 CLFCGVSI-AAWNALDVVTVELYPTDKRATAFGFLNGLCKLAAILGNSIFG 442
MFS_MdtG_SLC18_like cd17325
bacterial MdtG-like and eukaryotic solute carrier 18 (SLC18) family of the Major Facilitator ...
20-199 9.13e-15

bacterial MdtG-like and eukaryotic solute carrier 18 (SLC18) family of the Major Facilitator Superfamily of transporters; This family is composed of eukaryotic solute carrier 18 (SLC18) family transporters and related bacterial multidrug resistance (MDR) transporters including several proteins from Escherichia coli such as multidrug resistance protein MdtG, from Bacillus subtilis such as multidrug resistance proteins 1 (Bmr1) and 2 (Bmr2), and from Staphylococcus aureus such as quinolone resistance protein NorA. The family also includes Escherichia coli arabinose efflux transporters YfcJ and YhhS. MDR transporters are drug/H+ antiporters (DHA) that mediate the efflux of a variety of drugs and toxic compounds, and confer resistance to these compounds. The SLC18 transporter family includes vesicular monoamine transporters (VAT1 and VAT2), vesicular acetylcholine transporter (VAChT), and SLC18B1, which is proposed to be a vesicular polyamine transporter (VPAT). The MdtG/SLC18 family belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340883 [Multi-domain]  Cd Length: 375  Bit Score: 75.69  E-value: 9.13e-15
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1293418642  20 RFQWNVLLLCFIIIMLDGYDAAVMGFVAPALIEDWGISRAEMGPILGAAMFGVAIGALVAGPLSDRYGRKRILLWSVALF 99
Cdd:cd17325   196 LRDRRLLALFLAIFVLAFAFGALEPFLPLYAAELGGLSPAQIGLLFGAQGLASALSQPPAGKLSDRIGRKPLILIGLLLS 275
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1293418642 100 ALFSLAGAVAQSPSQLALMRFLTGLGLGAVMPNCVTLVAEYMPERRKGVMITLMYSGFNVGSGLGGFIAAGLLSHYSWHS 179
Cdd:cd17325   276 AVALLLLPLATSFWLLLLLLALLGLGLGLVFPATLALLADIVPPEGRGTAMGLFNTAFSLGMVLGPLLGGFLYDAFGFAT 355
                         170       180
                  ....*....|....*....|
gi 1293418642 180 ALIFGGVLPLVVLPFMIVML 199
Cdd:cd17325   356 PFLAAAALLLLAAVLFLLLR 375
MFS_SV2B cd17438
Synaptic vesicle glycoprotein 2B of the Major Facilitator Superfamily of transporters; ...
33-284 1.23e-14

Synaptic vesicle glycoprotein 2B of the Major Facilitator Superfamily of transporters; Synaptic vesicle glycoprotein 2 (SV2) is a transporter-like integral membrane glycoprotein, with 12 transmembrane regions, expressed in vertebrates and is localized to synaptic and endocrine secretory vesicles. Three isoforms have been identified, SV2A, SV2B, and SV2C. SV2A and SV2B are widely expressed in the brain, while SV2C is more restricted to evolutionarily older brain. SV2 isoforms have been shown to be critical for the proper function of the central nervous system. SV2 serves as the receptor for botulinum neurotoxin A (BoNT/A), one of seven neurotoxins produced by the bacterium Clostridium botulinum. BoNT/A blocks neurotransmitter release by cleaving synaptosome-associated protein of 25 kD (SNAP-25) within presynaptic nerve terminals. SV2B is a key modulator of amyloid toxicity at the synaptic site and also has an essential role in the formation and maintenance of the glomerular capillary wall. SV2B belongs to the Metazoan Synaptic Vesicle Glycoprotein 2 (SV2) and related small molecule transporter family (SV2-like) of the Major Facilitator Superfamily (MFS) of membrane transport proteins. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340996 [Multi-domain]  Cd Length: 477  Bit Score: 75.73  E-value: 1.23e-14
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1293418642  33 IMLDGYDAAVMGFVAPALIEDWGISRAEMGPILGAAMFGVAIGALVAGPLSDRYGRKRILLWSVALFALFSLAGAVAQSP 112
Cdd:cd17438     8 LMADGVEVFVVGFVLPSAEKDMCLSSSNKGMLGLIVYLGMMAGAFIWGGLADKLGRKRCLIISLAINASFAFLSSFVQGY 87
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1293418642 113 SQLALMRFLTGLGLGAVMPNCVTLVAEYMPERRKGVMITLMYSGFNVGSGLGGFIAAGLLSHYSW----------HSALI 182
Cdd:cd17438    88 GAFLFCRLISGFGIGGSLPIVFAYFSEFLAREKRGEHLSWLCMFWMIGGLYASAMAWSIIPHYGWgfsmgtnyhfHSWRV 167
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1293418642 183 FGGV--LPLVVLPFMIVMLPESAMNM--VARRLPGEQIARALN--RLGGQFTAETVFQLNappitrsskvaqlfrHGYAR 256
Cdd:cd17438   168 FVIIcaLPCIASIIALKFMPESPRFLleMGKHDEAWMILKNIHdtNMRAKGTPEKVFTVS---------------NIKRK 232
                         250       260
                  ....*....|....*....|....*...
gi 1293418642 257 GTIALWLTYFMGLFVIYLLNGWLPTILR 284
Cdd:cd17438   233 NTLFLAVVWFTMAFSYYGLTVWFPDMIR 260
MFS_MdfA_MDR_like cd17320
Multidrug transporter MdfA and similar multidrug resistance (MDR) transporters of the Major ...
48-221 1.36e-14

Multidrug transporter MdfA and similar multidrug resistance (MDR) transporters of the Major Facilitator Superfamily; This family is composed of bacterial multidrug resistance (MDR) transporters including several proteins from Escherichia coli such as MdfA (also called chloramphenicol resistance pump Cmr), EmrD, MdtM, MdtL, bicyclomycin resistance protein (also called sulfonamide resistance protein), and the uncharacterized inner membrane transport protein YdhC. EmrD is a proton-dependent secondary transporter, first identified as an efflux pump for uncouplers of oxidative phosphorylation. It expels a range of drug molecules and amphipathic compounds across the inner membrane of E. coli. Similarly, MdfA is a secondary multidrug transporter that exports a broad spectrum of structurally and electrically dissimilar toxic compounds. These MDR transporters are drug/H+ antiporters (DHA) belonging to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340878 [Multi-domain]  Cd Length: 379  Bit Score: 74.92  E-value: 1.36e-14
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1293418642  48 PALIEDWGISRAEMGPILGAAMFGVAIGALVAGPLSDRYGRKRILLWSVALFALFSLAGAVAQSPSQLALMRFLTGLGLG 127
Cdd:cd17320    23 PAIARDLGASASAVQLTLSAYLLGFALGQLLYGPLSDRFGRRPVLLAGLLLFILASLLCALASSIEQLLIARFLQGLGAA 102
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1293418642 128 AVMPNCVTLVAEYMPERRKGVMITLMYSGFNVGSGLGGFIAAGLLSHYSWHSALIFGGVLPLVVLPFMIVMLPESAMNMV 207
Cdd:cd17320   103 AGSVVARAIVRDLYSGAELAKIFSLLMMILAIAPALAPLLGGLLLLFFGWRAIFVFLALLGLLLLLLVLLFLPETLPEEK 182
                         170
                  ....*....|....
gi 1293418642 208 ARRLPGEQIARALN 221
Cdd:cd17320   183 RKPLLSSLLRAYKR 196
MFS_OPA_SLC37 cd17312
Organophosphate:Pi antiporter/Solute Carrier family 37 of the Major Facilitator Superfamily of ...
22-431 2.16e-14

Organophosphate:Pi antiporter/Solute Carrier family 37 of the Major Facilitator Superfamily of transporters; Organophosphate:Pi antiporters (OPA) are integral membrane proteins responsible for the transport of specific organophosphates or sugar phosphates across biological membranes with the simultaneous translocation of inorganic phosphate into the opposite direction. The OPA family is also called solute carrier family 37 (SLC37) in vertebrates. Members include glucose-6-phosphate (Glc6P) transporter (also called translocase or exchanger), glycerol-3-phosphate permease, 2-phosphonopropionate transporter, phosphoglycerate transporter, as well as membrane sensor protein UhpC from Escherichia coli. UhpC is both a sensor and a transport protein; it recognizes external Glc6P and induces transport by UhpT, and it can also transport Glc6P. Vertebrates contain four SLC37 or sugar-phosphate exchange (SPX) proteins: SLC37A1 (SPX1), SLC37A2 (SPX2), SLC37A3 (SPX3), and SLC37AA4 (SPX4). The OPA/SLC37 family belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340870 [Multi-domain]  Cd Length: 364  Bit Score: 74.23  E-value: 2.16e-14
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1293418642  22 QWNVLLLCFIIIMLDGYDAAVMGFVAPALIEDWGISRAEMGPILGAAMFGVAIGALVAGPLSDRYGRKRILLWSVALFAL 101
Cdd:cd17312     1 RWRIFLGVFLGYAAYYVCRKNFSVAKPPIVEEIGLSKDDLGIIGSAFLIAYAVGKFISGFLSDRSNIRRFMSAGLLLSAL 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1293418642 102 FSLAGAVAQSPSQLALMRFLTGLGLGAVMPNCVTLVAEYMPERRKGVMITLMYSGFNVGSGLGGFIAAGLLSHYSWHSAL 181
Cdd:cd17312    81 ANIFMGFSTSLWFFAVLWGLNGLFQSMGWPPCVKLLGNWFSKKERGTVYGIWSTSHNFGGILAPILAASLASYYGWRAAF 160
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1293418642 182 IFGGVLPLVVLPFMIVMLPESamnmvarrlpgeqiaralnrlggqftaetvfqlnaPPitrsskvaqlfrhgyarGTIAL 261
Cdd:cd17312   161 LVPGIVGLVVAIILFFFLRDS-----------------------------------PP-----------------YVWVL 188
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1293418642 262 WLTYFMGLFVIYLLNGWLPTILR-SGGLSLQQAAMMTGLFQLGGPLGGILVGMLMDRASAKAVIAATYFLGCLCLLSQGL 340
Cdd:cd17312   189 SLAYAFVYIVRYACLDWGPLYLYeVKGYSLIDAGWFSSLYEVGGIAGTILAGLLSDKLFGGRRAPIAVIYMLLMTLSLAL 268
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1293418642 341 MDFGSAAL---SVLIFISGMCINGAQNGLQAYSPAYYQT-EIRATGVSWMHGIGRTGAILSSTLGGmLMLAVPGHSSIFL 416
Cdd:cd17312   269 FWFFPHNKllsIVLLFLIGFFVGGPINLIGGAAAQDIGRkEAAGTATGFVGLFGYLGASLAGLPLG-YIIDHYGWSTVFY 347
                         410
                  ....*....|....*
gi 1293418642 417 VLGLPACLAGICILL 431
Cdd:cd17312   348 FLISAALLSVLLLLS 362
MFS_SLC22 cd17317
Solute carrier 22 (SLC22) family of organic cation/anion/zwitterion transporters of the Major ...
69-431 2.40e-14

Solute carrier 22 (SLC22) family of organic cation/anion/zwitterion transporters of the Major Facilitator Superfamily; The Solute carrier 22 (SLC22) family of organic cation/anion/zwitterion transporters includes organic cation transporters (OCTs), organic zwitterion/cation transporters (OCTNs), and organic anion transporters (OATs). SLC22 transporters interact with a variety of compounds that include drugs of abuse, environmental toxins, opioid analgesics, antidepressant and anxiolytic agents, and neurotransmitters and their metabolites. The SLC22 family belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340875 [Multi-domain]  Cd Length: 331  Bit Score: 73.77  E-value: 2.40e-14
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1293418642  69 MFGVAIGALVAGPLSDRYGRKRILLWSVALFALFSLAGAVAQSPSQLALMRFLTGLGLGAVMPNCVTLVAEYMPERRKGV 148
Cdd:cd17317    35 FLGVLIGSLLFGYLADRFGRRPVLLLGLVLQIVCGVLSAFSPSYELFLVLRFLVGVTSAGIFTVGFVLGMEIVGPKYRSF 114
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1293418642 149 MITLMYSGFNVGSGLGGFIAAgLLSHYSWhsaLIFGGVLPLVVLPFMIVMLPesamnmvarrlpgeqiaralnrlggqft 228
Cdd:cd17317   115 VGILFGLFWALGYMLLALLAY-LIRDWRW---LQLAISLPGLLFLLLLWWLP---------------------------- 162
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1293418642 229 aetvfqlnappitrsskvaqlfrhgyaRGTIALWLTYFMGLFVIY--LLNGwlptilRSGGLSLQQAAMMTGLFQLggpL 306
Cdd:cd17317   163 ---------------------------RRTIIVGLIWFVTSLVYYglSLNS------SNLGGNLYLNFFLSGLVEI---P 206
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1293418642 307 GGILVGMLMDRASAKAVIAATYFLGCLCLLSQGLMDFGSAALSVLIFISG-MCINGAQNGLQAYSPAYYQTEIRATGVSW 385
Cdd:cd17317   207 AYFLALLLLDRLGRRWTLSGSLLLAGLACLVTALLPDDENTLALTLALVGkFAISAAFSVIYLYTAELYPTVVRNTGVGL 286
                         330       340       350       360
                  ....*....|....*....|....*....|....*....|....*...
gi 1293418642 386 MHGIGRTGAILSS--TLGGMLMLAVPghssiFLVLGLPACLAGICILL 431
Cdd:cd17317   287 CSTVARVGAILAPfiVLLGKIGPLLP-----LIIFGVLALLGGLLTLL 329
MFS_OFA_like cd17353
Oxalate:formate antiporter (OFA) and similar proteins of the Major Facilitator Superfamily of ...
44-431 5.55e-14

Oxalate:formate antiporter (OFA) and similar proteins of the Major Facilitator Superfamily of transporters; This subfamily is composed of Oxalobacter formigenes oxalate:formate antiporter (OFA or OxlT) and similar proteins. O. formigenes, a commensal found in the gut of animals and humans, plays an important role in clearing dietary oxalate from the intestinal tract, which is carried out by OFA/OxlT, an anion transporter that facilitates the exchange of divalent oxalate with monovalent formate, the product of oxalate decarboxylation. This exchange generates an electrochemical proton gradient and is the source of energy for ATP synthesis in this cell. The OFA-like subfamily belongs to the Monocarboxylate transporter -like (MCT-like) family of the Major Facilitator Superfamily (MFS) of membrane transport proteins. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340911 [Multi-domain]  Cd Length: 389  Bit Score: 73.41  E-value: 5.55e-14
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1293418642  44 GFVAPALIEDWGISRAEMGPILGAAMFGVAIGALVAGPLSDRYGRKRILLWSVALFAL-FSLAGAVAQSPSQLALMRFLT 122
Cdd:cd17353    23 SVFNPPLSSALGWSLASVALAFTLTIVFLAISAPFAGRLVDRGGPRKAILIGGILFGLgFILSAFAISLPLLFLGYGVLG 102
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1293418642 123 GLGLGAVMPNCVTLVAEYMPERRkGVMITLMYSGFNVGSGLGGFIAAGLLSHYSWHSALIFGGVLPLVVLPFMIVMLpes 202
Cdd:cd17353   103 GIGAGIGYITPVSTAVKWFPDKR-GLATGIVIAGFGLGSLIFSPLIAYLINTVGVPTTFLILGIIFLIIIVIGAFLI--- 178
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1293418642 203 amnmvarRLPGEQIARALNRLGGQFTAETVFQLNAPPITRSSKvaqlfrhgyargTIALWLTYFMGLFVIYLLNGWLPTI 282
Cdd:cd17353   179 -------RDPPKGWVPPGVDPLANNAENSPRDYTPREMLRTPT------------FWLLWLMFFLNATAGLMLIGQAKPI 239
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1293418642 283 LRS-GGLSLQQAAMMTGLFQLGGPLGGILVGMLMDRASAKAVIAATYFLGCLCLLSQGLMDFGSAALSVLIFISGMCING 361
Cdd:cd17353   240 GQEfAGLDAGIAALAVSILSIFNGGGRPFWGWLSDKIGRKNTLSIAFLIQGVAMFLLPFIGSVAVLFVLGVALIGFCYGG 319
                         330       340       350       360       370       380       390
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1293418642 362 AQNGLQAYSPAYYQTEIRATgvswMHGIGRTGAILSSTLGGML---MLAVPGHSSIFLVLGLPACLAGICILL 431
Cdd:cd17353   320 GFALFPALTADFFGTKNAGT----NYGLLYTAKGVGGLIGPIIaayVLYTGGYNAAFIIAAALSLVALALALL 388
MFS_FsR cd17478
Fosmidomycin resistance protein of the Major Facilitator Superfamily of transporters; ...
1-194 5.55e-14

Fosmidomycin resistance protein of the Major Facilitator Superfamily of transporters; Fosmidomycin resistance protein (FsR) confers resistance against fosmidomycin. It shows sequence similarity with the bacterial drug-export proteins that mediate resistance to tetracycline and chloramphenicol. This FsR family belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 341031 [Multi-domain]  Cd Length: 365  Bit Score: 72.97  E-value: 5.55e-14
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1293418642   1 MNHMNVVDVKAWIDARPVSRFQWNVLLLCFIIIMLDGYDAAVMGFVAPALIEDWGISRAEMGPILGAAMFGVAIGALVAG 80
Cdd:cd17478   172 LKKPEAKKAAAKSSARSTLKGVWRALLLLLIIVFLRSWVLSSLTTFLPFYLVQRGYSLVFAGLLLSLFLFAGAIGTLIGG 251
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1293418642  81 PLSDRYGRKRILLWSVALFALFSLAGAVAQSPSQLALMrFLTGLGLGAVMPNCVTLVAEYMPERRkgVMITLMYSGFNVG 160
Cdd:cd17478   252 PLSDRFGRRRVIIASLLLAAPFLLLFLLTPGIWSYILL-VLAGFLLFASFPVTVVLAQELLPGNV--GLASGLMMGLSFG 328
                         170       180       190
                  ....*....|....*....|....*....|....*
gi 1293418642 161 -SGLGGFIAAGLLSHYSWHSALIFGGVLPLVVLPF 194
Cdd:cd17478   329 lGGIGAPVLGALADAFGLESVLLILALLPLLGALL 363
MFS_YfcJ_like cd17489
Escherichia coli YfcJ, YhhS, and similar transporters of the Major Facilitator Superfamily; ...
46-198 6.00e-14

Escherichia coli YfcJ, YhhS, and similar transporters of the Major Facilitator Superfamily; This subfamily is composed of Escherichia coli membrane proteins, YfcJ and YhhS, Bacillus subtilis uncharacterized MFS-type transporter YwoG, and similar proteins. YfcJ and YhhS are putative arabinose efflux transporters. YhhS has been implicated glyphosate resistance. YfcJ-like arabinose efflux transporters belong to the bacterial MdtG-like and eukaryotic solute carrier 18 (SLC18) family of the Major Facilitator Superfamily (MFS) of transporters. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 341042 [Multi-domain]  Cd Length: 367  Bit Score: 73.01  E-value: 6.00e-14
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1293418642  46 VAPALIEDWGISRAEMGPILGAAMFGVAIGALVAGPLSDRYGRKRILLWSVALFALFSLAGAVAQSPSQLALMRFLTGLG 125
Cdd:cd17489    18 VLPLYAHDLGGSEAVAGLVVGLFTLAALLARPFAGRLLDRFGRKRLLLIGLLIFALATLLYLLATSVALLLVLRLIHGIG 97
                          90       100       110       120       130       140       150
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1293418642 126 LGAVMPNCVTLVAEYMPERRKGVMITLMYSGFNVGSGLGGFIAAGLLSHYSWHSALIFGGVLPLVVLPFMIVM 198
Cdd:cd17489    98 WGAFTTAAATLVADIIPPSRRGEGIGYYGLATTLAMALGPALGLFLYQHLGFAVLFIVAAVLALLALLLVFLV 170
MFS_OAT cd17374
Organic anion transporters of the Major Facilitator Superfamily of transporters; Organic anion ...
69-431 7.35e-14

Organic anion transporters of the Major Facilitator Superfamily of transporters; Organic anion transporters (OATs) generally display broad substrate specificity and they facilitate the exchange of extracellular with intracellular organic anions (OAs). Several OATs have been characterized including OAT1-10 and urate anion exchanger 1 (URAT1, also called SLC22A12). Many OATs occur in renal proximal tubules, the site of active drug secretion. OATs mediate the absorption, distribution, and excretion of a diverse array of environmental toxins, and clinically important drugs, including anti-HIV therapeutics, anti-tumor drugs, antibiotics, anti-hypertensives, and anti-inflammatories, and therefore is critical for the survival of the mammalian species. OAT falls into the SLC22 (solute carrier 22) family of the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340932 [Multi-domain]  Cd Length: 341  Bit Score: 72.32  E-value: 7.35e-14
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1293418642  69 MFGVAIGALVAGPLSDRYGRKRILLWSVALFALFSLAGAVAQSPSQLALMRFLTGLGLGAVMPNCVTLVAEYMPERRKGV 148
Cdd:cd17374    45 MAGLLVGALIFGHLSDRFGRKFILLLSLLQLAIFGTCAAFAPTFPVYCVLRFLAGFAVSGISINTLILGTEWTTPRHRAL 124
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1293418642 149 MITLMYSGFNVGSGLGGFIAAGLlshYSWHsalifggVLPLVV-LPFMIVMLPESAMNMVarrlpgeqiaralnrlggqf 227
Cdd:cd17374   125 AITLTSCFFSIGQMLLAGLAYAI---RDWR-------LLQLVVsVPFFLFFLYSWWLPKR-------------------- 174
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1293418642 228 taetvfqlnappitrsskvaqlfrhgyargTIALWLTYFMGLFVIYLLNgwlpTILRSGGLSLQQAAMMTGLFQLGGPLG 307
Cdd:cd17374   175 ------------------------------TLILSFVWFANSFSYYGLS----LDLQHLGLNVFLLQFLFGAVEVPARCL 220
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1293418642 308 GILvgmLMDRASAKAVIAATYFLGCLCLLSQGLMDFGSAALSVLIFISG-MCINGAQNGLQAYSPAYYQTEIRATGVSWM 386
Cdd:cd17374   221 ALF---LLNHMGRRISQAVLLLLAGLCILANIFVPQEMQTLRTVLAVLGkGSSAAAFTISYVYTAELFPTVLRQTGMGLN 297
                         330       340       350       360
                  ....*....|....*....|....*....|....*....|....*
gi 1293418642 387 HGIGRTGAILSSTlggMLMLAVPGHSSIFLVLGLPACLAGICILL 431
Cdd:cd17374   298 SMFARIGGILAPL---IMLLGVYSPLLPMIIYGVLPILAGLLALL 339
MFS_GLUT_like cd17315
Glucose transporters (GLUTs) and other similar sugar transporters of the Major Facilitator ...
34-202 8.48e-14

Glucose transporters (GLUTs) and other similar sugar transporters of the Major Facilitator Superfamily; This family is composed of glucose transporters (GLUTs) and other sugar transporters including fungal hexose transporters (HXT), bacterial xylose transporter (XylE), plant sugar transport proteins (STP) and polyol transporters (PLT), H(+)-myo-inositol cotransporter (HMIT), and similar proteins. GLUTs, also called Solute carrier family 2, facilitated glucose transporters (SLC2A), are a family of proteins that facilitate the transport of hexoses such as glucose and fructose. There are fourteen GLUTs found in humans; they display different substrate specificities and tissue expression. They have been categorized into three classes based on sequence similarity: Class 1 (GLUTs 1-4, 14); Class 2 (GLUTs 5, 7, 9, and 11); and Class 3 (GLUTs 6, 8, 10, 12, and HMIT). GLUT proteins are comprised of about 500 amino acid residues, possess a single N-linked oligosaccharide, and have 12 transmembrane segments. The GLUT-like family belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340873 [Multi-domain]  Cd Length: 365  Bit Score: 72.61  E-value: 8.48e-14
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1293418642  34 MLDGYDAAVMGFVAPALIEDWGI--SRAEMGPILGAAMFGVAIGALVAGPLSDRYGRKRILLWSVALFALFSLAGAVAQS 111
Cdd:cd17315     7 LLFGYDLGVINGALLYIAKDLGFglSTSLQGLVVSSLLLGAAIGSLFGGPLADRFGRRKSLLIAAVLYVIGALLSALAPN 86
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1293418642 112 PSQLALMRFLTGLGLGAVMPNCVTLVAEYMPERRKGVMITLMYSGFNVGSgLGGFIAAGLLSHYSWHSALIFGGV--LPL 189
Cdd:cd17315    87 VWVLIVGRFLLGLGVGLASVLVPLYISEIAPAKIRGALGTLNQLMITFGI-LLAYLLGLALSLSPPGWWRLMFALaaVPA 165
                         170
                  ....*....|...
gi 1293418642 190 VVLPFMIVMLPES 202
Cdd:cd17315   166 LLQLLLMFFLPES 178
MFS_FsR cd17478
Fosmidomycin resistance protein of the Major Facilitator Superfamily of transporters; ...
48-362 2.06e-13

Fosmidomycin resistance protein of the Major Facilitator Superfamily of transporters; Fosmidomycin resistance protein (FsR) confers resistance against fosmidomycin. It shows sequence similarity with the bacterial drug-export proteins that mediate resistance to tetracycline and chloramphenicol. This FsR family belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 341031 [Multi-domain]  Cd Length: 365  Bit Score: 71.43  E-value: 2.06e-13
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1293418642  48 PALIEDWGISRAEMGPILGAAMFGVAIGALVAGPLSDRYGRKRILLWSVALFALFSLAGAVAQSPSQLALMRFLTGLGLG 127
Cdd:cd17478    20 PLLIAKLGLSYAQAGLLVSVFSITSSLLQPLFGYLADRKPRRYLLPLGPLLTGLGLSLLGFAPNYWLLLLLVALAGIGSA 99
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1293418642 128 AVMPNCVTLVAEYMPERRKGVMITLMYSGfNVGSGLGGFIAAGLLSHYSWHSALIFGGVLPLVVLPFMIVMLPESAmnmv 207
Cdd:cd17478   100 AFHPEGARLASQAAGGRRGLAMSIFSVGG-NLGFALGPLIAAALVALFGGLGLLILLIIPGLAVALLLLRLRPLKK---- 174
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1293418642 208 arrlpgeqiaralnrlggqftaetvfqlNAPPITRSSKVAQLFRHGYARGTIALWLTYFMGLFVIYLLNGWLPTILRSGG 287
Cdd:cd17478   175 ----------------------------PEAKKAAAKSSARSTLKGVWRALLLLLIIVFLRSWVLSSLTTFLPFYLVQRG 226
                         250       260       270       280       290       300       310
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1293418642 288 LSLQQAAMMTGLFQLGGPLGGILVGMLMDRASAKAVIAATYFLGCLCLLsqGLMDFGSAALSVLIFISGMCINGA 362
Cdd:cd17478   227 YSLVFAGLLLSLFLFAGAIGTLIGGPLSDRFGRRRVIIASLLLAAPFLL--LFLLTPGIWSYILLVLAGFLLFAS 299
MFS_MT3072_like cd17475
Mycobacterium tuberculosis uncharacterized MFS-type transporter MT3072 and similar ...
44-361 3.30e-13

Mycobacterium tuberculosis uncharacterized MFS-type transporter MT3072 and similar transporters of the Major Facilitator Superfamily; This family includes the Mycobacterium tuberculosis uncharacterized MFS-type transporter MT3072. It belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 341028 [Multi-domain]  Cd Length: 378  Bit Score: 70.73  E-value: 3.30e-13
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1293418642  44 GFVAPALIEDWGISRAEMGPILGAAMFGVAIGALVAGPLSDRYGRKRIL-LWSVALFALFSLAGAVAQSPSQLALMrFLT 122
Cdd:cd17475    16 PALAPFLQEDLHLSLAQVGLLLSALNLGVAVSMLPAGWLLDRFGERRVLaVGLLLMGAAALLMALVGSYPVLLVLL-FLV 94
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1293418642 123 GLGLGAVMPNCVTLVAEYMPERRKGVMITLMYSGFNVGSGLGGFIAAGLLSHYSWHSALIFGGVLPLVVLPFMIVMLPES 202
Cdd:cd17475    95 GAGYGSVQPGGGRAIMRWFPPRERGLAMGIRQTGVPLGGALAAALLPPLALHYGWRAAFVVAGLVSILAAVLFWLFYREP 174
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1293418642 203 AMNMVARRlpgeqiaralnrlggqftAETVFQLNAPPITRSSKVAQLFRHGYARGTIALWLTYFMGLFVIYLLngwlpti 282
Cdd:cd17475   175 PAASAATE------------------SASTLLRSLKEVLRNRDVWLIAIAGALLVAPQFALLTFLLLFLHDHL------- 229
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1293418642 283 lrsgGLSLQQAAMMTGLFQLGGPLGGILVGMLMDRASAKAVIAATYFLGCLCLLSQGLMDFGS----AALSVLIFI-SGM 357
Cdd:cd17475   230 ----GLSVVAAGALLAVAQLGGALGRIGLGRVSDRVFGGRRRPVLVITAAIAAAALLVLSLLSpgtpLWLLVLLLIlLGL 305

                  ....
gi 1293418642 358 CING 361
Cdd:cd17475   306 FAIG 309
2_A_01_02 TIGR00880
Multidrug resistance protein;
71-202 3.97e-13

Multidrug resistance protein;


Pssm-ID: 273318 [Multi-domain]  Cd Length: 141  Bit Score: 66.52  E-value: 3.97e-13
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1293418642  71 GVAIGALVAGPLSDRYGRKRILLWSVALFALFSLAGAVAQSPSQLALMRFLTGLGLGAVMPNCVTLVAEYMPERRKGVMI 150
Cdd:TIGR00880  10 GQLIYSPLSGLLTDRFGRKPVLLVGLFIFVLSTAMFALSSNITVLIIARFLQGFGAAFALVAGAALIADIYPPEERGVAL 89
                          90       100       110       120       130
                  ....*....|....*....|....*....|....*....|....*....|..
gi 1293418642 151 TLMYSGFNVGSGLGGFIAAGLLSHYSWHSALIFGGVLPLVVLPFMIVMLPES 202
Cdd:TIGR00880  90 GLMSAGIALGPLLGPPLGGVLAQFLGWRAPFLFLAILALAAFILLAFLLPET 141
MFS_SV2A cd17439
Synaptic vesicle glycoprotein 2A of the Major Facilitator Superfamily of transporters; ...
33-177 4.94e-13

Synaptic vesicle glycoprotein 2A of the Major Facilitator Superfamily of transporters; Synaptic vesicle glycoprotein 2 (SV2) is a transporter-like integral membrane glycoprotein, with 12 transmembrane regions, expressed in vertebrates and is localized to synaptic and endocrine secretory vesicles. Three isoforms have been identified, SV2A, SV2B, and SV2C. SV2A and SV2B are widely expressed in the brain, while SV2C is more restricted to evolutionarily older brain. SV2 isoforms have been shown to be critical for the proper function of the central nervous system. SV2 serves as the receptor for botulinum neurotoxin A (BoNT/A), one of seven neurotoxins produced by the bacterium Clostridium botulinum. BoNT/A blocks neurotransmitter release by cleaving synaptosome-associated protein of 25 kD (SNAP-25) within presynaptic nerve terminals. It is unclear how SV2A is involved in correct SV function, but it has been suggested to either act as a transporter or a regulator of exocytosis by mediating Ca2+ dynamics. SV2A has been identified as the molecular target of the antiepileptic drug levetiracetam (LEV). Its expression is decreased in patients with epilepsy and in epileptic animal models. SV2A belongs to the Metazoan Synaptic Vesicle Glycoprotein 2 (SV2) and related small molecule transporter family (SV2-like) of the Major Facilitator Superfamily (MFS) of membrane transport proteins. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340997 [Multi-domain]  Cd Length: 478  Bit Score: 70.83  E-value: 4.94e-13
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1293418642  33 IMLDGYDAAVMGFVAPALIEDWGISRAEMGPILGAAMFGVAIGALVAGPLSDRYGRKRILLWSVALFALFSLAGAVAQSP 112
Cdd:cd17439     8 LMADGVEVFVVGFVLPSAEKDMCLSDSNKGMLGLIVYLGMMVGAFLWGGLADRIGRRQCLLISLSVNSVFAFFSSFVQGY 87
                          90       100       110       120       130       140
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1293418642 113 SQLALMRFLTGLGLGAVMPNCVTLVAEYMPERRKGVMITLMYSGFNVGSGLGGFIAAGLLSHYSW 177
Cdd:cd17439    88 GTFLFCRLLSGVGIGGSIPIVFSYFSEFLAQEKRGEHLSWLCMFWMIGGIYASAMAWAIIPHYGW 152
MFS_Azr1_MDR_like cd17502
Saccharomyces cerevisiae Azole resistance protein 1 (Azr1p), and similar multidrug resistance ...
73-208 8.15e-13

Saccharomyces cerevisiae Azole resistance protein 1 (Azr1p), and similar multidrug resistance (MDR) transporters of the Major Facilitator Superfamily; This subfamily is composed of multidrug resistance (MDR) transporters including various Saccharomyces cerevisiae proteins such as azole resistance protein 1 (Azr1p), vacuolar basic amino acid transporter 1 (Vba1p), vacuolar basic amino acid transporter 5 (Vba5p), and Sge1p (also known as Nor1p, 10-N-nonyl acridine orange resistance protein, and crystal violet resistance protein). MDR transporters are drug/H+ antiporters (DHA) that mediate the efflux of a variety of drugs and toxic compounds, and confer resistance to these compounds. This subfamily belongs to the Methylenomycin A resistance protein (also called MMR peptide) and similar multidrug resistance (MDR) transporters (MMR-like MDR transporter) family of the Major Facilitator Superfamily (MFS) of transporters. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 341045 [Multi-domain]  Cd Length: 337  Bit Score: 69.13  E-value: 8.15e-13
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1293418642  73 AIGALVAGPLSDRYGRKRILLWSVALFALFSLAGAVAQSPSQLALMRFLTGLGLGAVMPNCVTLVAEYMPERRKGVMITL 152
Cdd:cd17502    44 TAFQPIYGKLSDLFGRKWVLLIAIVIFELGSLLCGLAPNMTMLIVGRAIQGIGGGGLMSLAFIIIADLVPPRERGKYQGY 123
                          90       100       110       120       130
                  ....*....|....*....|....*....|....*....|....*....|....*.
gi 1293418642 153 MYSGFNVGSGLGGFIAAGLLSHYSWHSalIFGGVLPLVVLpfMIVMLPESAMNMVA 208
Cdd:cd17502   124 IGAVFGIASVAGPLIGGAFTDHLSWRW--CFYINLPIGGL--ALALLRTILLSSIF 175
MFS_YcaD_like cd17477
YcaD and similar transporters of the Major Facilitator Superfamily; This family is composed of ...
40-361 8.89e-13

YcaD and similar transporters of the Major Facilitator Superfamily; This family is composed of Escherichia coli MFS-type transporter YcaD, Bacillus subtilis MFS-type transporter YfkF, and similar proteins. They are uncharacterized transporters belonging to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 341030 [Multi-domain]  Cd Length: 360  Bit Score: 69.12  E-value: 8.89e-13
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1293418642  40 AAVMGFVAPAL---IEDWGISRAEMGPILGAAMFGVAIGALVAGPLSDRYGRKRILLWSVALFALFSLAGAVAQSPSQLA 116
Cdd:cd17477     9 GLGSGLLLPLLslrLEREGVSTALIGLVASAYYLGILLGSPLVPRLIRRVGHIRAFAAGAAITAVSVLLLALTDSPWVWF 88
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1293418642 117 LMRFLTGLGLGAVMPNCVTLVAEYMPERRKGVMITLMYSGFNVGSGLGGFIAAgLLSHYSWHSALIFGGVLPLVVLPFMI 196
Cdd:cd17477    89 LLRFVMGIGLAGLFVVSESWLNALATNENRGRVLGLYSTVLGLGFALGPLLLA-LVGTAGALPFLIAAVLLLLALVPLLL 167
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1293418642 197 VmlpesamnmvarrlpgeqiaralnrlggqftaetvfQLNAPPITRSSKVAqlFRHGYARGTIALWLTYFMGLFVIyLLN 276
Cdd:cd17477   168 T------------------------------------RRAAPEIEEAESIS--LRRLLRIAPLALLGAFVAGFLEG-AFY 208
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1293418642 277 GWLPTILRSGGLSLQQAAMMTGLFQLGGPLGGILVGMLMDRASAKAVIAATYFLGCLCLLSQGLMDFGSAALSVLIFISG 356
Cdd:cd17477   209 SLLPLYGLRLGLSVAQAALLLAAFVLGGLLLQWPLGWLADRFDRRRVLLGCALLGALAALLLPLVPGLPLALLVLLFLWG 288

                  ....*
gi 1293418642 357 MCING 361
Cdd:cd17477   289 GAAGP 293
MFS_GLUT6_8_Class3_like cd17358
Glucose transporter (GLUT) types 6 and 8, Class 3 GLUTs, and similar transporters of the Major ...
70-354 8.95e-13

Glucose transporter (GLUT) types 6 and 8, Class 3 GLUTs, and similar transporters of the Major Facilitator Superfamily; This subfamily is composed of glucose transporter type 6 (GLUT6), GLUT8, plant early dehydration-induced gene ERD6-like proteins, and similar insect proteins including facilitated trehalose transporter Tret1-1. GLUTs, also called Solute carrier family 2, facilitated glucose transporters (SLC2A), are a family of proteins that facilitate the transport of hexoses such as glucose and fructose. There are fourteen GLUTs found in humans; they display different substrate specificities and tissue expression. They have been categorized into three classes based on sequence similarity: Class 1 (GLUTs 1-4, 14); Class 2 (GLUTs 5, 7, 9, and 11); and Class 3 (GLUTs 6, 8, 10, 12, and HMIT). Insect Tret1-1 is a low-capacity facilitative transporter for trehalose that mediates the transport of trehalose synthesized in the fat body and the incorporation of trehalose into other tissues that require a carbon source. GLUT proteins are comprised of about 500 amino acid residues, possess a single N-linked oligosaccharide, and have 12 transmembrane segments. They belong to the Glucose transporter -like (GLUT-like) family of the Major Facilitator Superfamily (MFS) of membrane transport proteins. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340916 [Multi-domain]  Cd Length: 436  Bit Score: 69.91  E-value: 8.95e-13
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1293418642  70 FGVAIGALVAGPLSDRYGRKRILLWSVALFALFSLAGAVAQSPSQLALMRFLTGLGLGAVMPNCVTLVAEYMPERRKGVM 149
Cdd:cd17358    52 LGALIGALLSGKLADRIGRKRTLLISAIPCILGWLLIAFAKDVWMLYLGRFLAGFGGGAASVVVPVYIAEIAPKNVRGAL 131
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1293418642 150 ITLMYSGFNVGSGLGGFIAagllSHYSWHSALIFGGVLPLVVLPFMIVMlPESAMNMvARRLPGEQIARALNRLGGQ--- 226
Cdd:cd17358   132 GSLNQLLVNIGILLGYVLG----SFLPWRTLALIGAIPPVVFLILLFFI-PESPRWL-AKKGREEEAEKSLQFLRGKdad 205
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1293418642 227 ------FTAETVFQLNAppITRSSKVAQLFRHGYARGTIALwltyfMGLFVIYLLNG------WLPTILRSGG--LSLQQ 292
Cdd:cd17358   206 iskeaaEIQEELAELEK--EAKESSFSDLFQRKYLKPLVIG-----LGLMLFQQLSGinavifYASSIFDEAGsgLDPNT 278
                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1293418642 293 AAMMTGLFQLggpLGGILVGMLMDRASAKAviaatyflgcLCLLSQGLMDFGSAALSVLIFI 354
Cdd:cd17358   279 ATIIIGVVQV---VGTLVATLLVDRLGRRP----------LLLVSAIGMGIGLLALGLYFYL 327
MFS_SLC22A6_OAT1_like cd17446
Solute carrier family 22 member 6 (also called Organic anion transporter 1) and similar ...
69-171 1.36e-12

Solute carrier family 22 member 6 (also called Organic anion transporter 1) and similar transporters of the Major Facilitator Superfamily; This subfamily includes solute carrier family 22 member 6 (SLC22A6, also called organic anion transporter 1 or OAT1 or para-aminohippurate (PAH) transporter), SLC22A8 (or OAT3), and SLC22A20 (or OAT6). OAT1 and OAT3 are involved in the renal elimination of endogenous and exogenous organic anions (OAs). They function as OA exchangers, coupling the uptake of OAs against an electrochemical gradient with the efflux of intracellular dicarboxylates. SLC22A20 is an OA transporter that mediates the uptake of estrone sulfate. The OAT1-like subfamily belongs to the Solute carrier 22 (SLC22) family of organic cation/anion/zwitterion transporters of the Major Facilitator Superfamily (MFS) of membrane transport proteins. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 341004 [Multi-domain]  Cd Length: 339  Bit Score: 68.60  E-value: 1.36e-12
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1293418642  69 MFGVAIGALVAGPLSDRYGRKRILLWSVALFALFSLAGAVAQSPSQLALMRFLTGLGLGAVMPNCVTLVAEYMPERRKGV 148
Cdd:cd17446    43 MAGVLVGAIVFGGLSDRFGRRPLLIWSYLQMAVSGTCAAFSPSFPIYCVFRFLTGMALSGIVLNSVSLNVEWMPTRVRAV 122
                          90       100
                  ....*....|....*....|...
gi 1293418642 149 MITLMYSGFNVGSglggFIAAGL 171
Cdd:cd17446   123 VGTLLGYCYTLGQ----LILAGV 141
MFS_SLC17 cd17318
Solute carrier 17 (SLC17) family of the Major Facilitator Superfamily of transporters; The ...
53-200 3.13e-12

Solute carrier 17 (SLC17) family of the Major Facilitator Superfamily of transporters; The Solute carrier 17 (SLC17) family is primarily involved in the transport of organic anions. There are nime human proteins belonging to this family including: the type I phosphate transporters (SLC17A1-4) that were initially identified as sodium-dependent inorganic phosphate (Pi) transporters but are now known to be involved in tha transport of organic anions; lysosomal acidic sugar transporter (SLC17A5 or sialin), vesicular glutamate transporters (VGluT1#3 or SLC17A7, SLC17A6, and SLC17A8, respectively), and a vesicular nucleotide transporter (VNUT or SLC17A9). SLC17A1 and SLC17A3 have roles in the transport of urate and para-aminohippurate, respectively. The SLC17 family belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340876 [Multi-domain]  Cd Length: 389  Bit Score: 68.03  E-value: 3.13e-12
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1293418642  53 DWgiSRAEMGPILGAAMFGVAIGALVAGPLSDRYGRKRILLWSVALFALFSLAGAVAQSPSQ--LALMRFLTGLGLGAVM 130
Cdd:cd17318    52 DW--SEKTQGIILSSFFYGYILTQIPGGYLAEKYGAKRVLGYSILITALLTLLTPLAARGGYgaLIVLRILQGLAQGVTF 129
                          90       100       110       120       130       140       150
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1293418642 131 PNCVTLVAEYMPERRKGVMITLMYSGFNVGSGLGGFIAAGLLSHYSWHSAL-IFGGVLPLVVLPFMIVMLP 200
Cdd:cd17318   130 PAMHALWAKWAPPLERSRLTSIAYSGSQFGTVIAMPLSGFLCESLGWPSIFyIFGGLGLLWCLLWFFLVLP 200
MFS_NRT2_like cd17341
Plant Nitrate transporter NRT2 family and Bacterial Nitrate/Nitrite transporters of the Major ...
21-366 9.64e-12

Plant Nitrate transporter NRT2 family and Bacterial Nitrate/Nitrite transporters of the Major Facilitator Superfamily; This family is composed of plant NRT2 family high-affinity nitrate transporters as well as nitrate and nitrite transporters from bacteria including Bacillus subtilis nitrate transporter NasA and nitrite extrusion protein NarK, Staphylococcus aureus NarT, Synechococcus sp. nitrate permease NapA, Mycobacterium tuberculosis NarK2 and nitrite extrusion protein NarU. NRT2 family proteins are involved in the uptake of nitrate by plant roots from the soil through the high-affinity transport system (HATS). There are seven Arabidopsis thaliana NRT2 proteins, called AtNRT2:1 to AtNRT2:7. The NRT2-like family belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340899 [Multi-domain]  Cd Length: 384  Bit Score: 66.12  E-value: 9.64e-12
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1293418642  21 FQWNVLLLCFIIIMLdgydaavMGFVAPALIEDWGISRAEMGPILGAAMFGVAIGALVAGPLSDRYGRKRILLWSVALFA 100
Cdd:cd17341     3 LSWLSFFLGFMVWFL-------FAPLGPVIRDDLGLSTSQIGLLVAIPVLAGALLRLPYGFLCDRFGGRRVFIASLLLLL 75
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1293418642 101 LFSLAGAVA-QSPSQLALMRFLTGLGlGAVMPNCVTLVAEYMPERRKGVMITLMYSGFNVGSGLGGFIA-------AGLL 172
Cdd:cd17341    76 IPLLALALAvSSYWGLLVLGFLLGFA-GANFASGQPWASFWFPKEKIGGAAGGIAGAGNMGVAVSQLLApliagaiVFDG 154
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1293418642 173 SHYSWHSALIFGGVLPLVVLPFMIVMlpesamnmvARRLPGEqiaralnrlggqftaetvfqlNAPPITRSSKVAQLFRH 252
Cdd:cd17341   155 GFVGWRNAFFVPGILLAIAAVLVLLF---------GDDLPTG---------------------KASALEFLKVQLAVLKN 204
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1293418642 253 gyaRGTIALWLTYFM--GLFVIYllNGWLPTILRSG-GLSLQQAAMMTGLFQLGGPLGGILVGMLMDRASAKAVIAATYF 329
Cdd:cd17341   205 ---YRTWILSLLYGVtfGSFVGF--SNVLPTYFKTRfGLPLVTAGILAALFPLAGALARPAGGWLSDRFGGRRRLWWLFI 279
                         330       340       350       360
                  ....*....|....*....|....*....|....*....|
gi 1293418642 330 LGCLCLLSQGLMDFGSAA---LSVLIFISGMCINGAQNGL 366
Cdd:cd17341   280 VMTIGAALLSLSLPTSGTnlvLFLALFVALGLGAGAGNGS 319
MFS_MdtH_MDR_like cd17329
Multidrug resistance protein MdtH and similar multidrug resistance (MDR) transporters of the ...
40-213 1.25e-11

Multidrug resistance protein MdtH and similar multidrug resistance (MDR) transporters of the Major Facilitator Superfamily; This family is composed of Escherichia coli MdtH and similar multidrug resistance (MDR) transporters from bacteria and archaea, many of which remain uncharacterized. MDR transporters are drug/H+ antiporters (DHA) that mediate the efflux of a variety of drugs and toxic compounds, and confer resistance to these compounds. MdtH confers resistance to norfloxacin and enoxacin. MdtH-like MDR transporters belong to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340887 [Multi-domain]  Cd Length: 376  Bit Score: 66.10  E-value: 1.25e-11
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1293418642  40 AAVMGFVAPALIEDWGISRAEMGPILGAAMFGVAIGALVAGPLSDRYGRKRILLWSVALFALFSLAGAVAQSPSQLALMR 119
Cdd:cd17329    16 FMVWPFMAIYLHQQLGLSASIVGLVLALSAVAGIVASLIGGRLADRFGRKPVMLAGLLLRALGFALLGFAHSPWLFAIAL 95
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1293418642 120 FLTGLGLGAVMPNCVTLVAEYMPERRKGVMITLMYSGFNVGSGLGGfIAAGLLSHYSWHSALIFGGVLPLVVLPFMIVML 199
Cdd:cd17329    96 VLTGFGGGLFEPASEAMIADVTTPENRTRAFSLLYWAINLGVAIGP-LLGGLLLLYSFRLLFLAAAVLFLLAALVLLFLL 174
                         170
                  ....*....|....
gi 1293418642 200 PESAMNMVARRLPG 213
Cdd:cd17329   175 PETRPKRRAAEKTE 188
efflux_Bcr_CflA TIGR00710
drug resistance transporter, Bcr/CflA subfamily; This subfamily of drug efflux proteins, a ...
19-202 1.61e-11

drug resistance transporter, Bcr/CflA subfamily; This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 12 membrane-spanning regions. Members with known activity include Bcr (bicyclomycin resistance protein) in E. coli, Flor (chloramphenicol and florfenicol resistance) in Salmonella typhimurium DT104, and CmlA (chloramphenicol resistance) in Pseudomonas sp. plasmid R1033.


Pssm-ID: 273229 [Multi-domain]  Cd Length: 385  Bit Score: 65.48  E-value: 1.61e-11
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1293418642  19 SRFQWNVLLLCFIIIMLDGYDAAVMGFvaPALIEDWGISRAEMGPILGAAMFGVAIGALVAGPLSDRYGRKRILLWSVAL 98
Cdd:TIGR00710   2 SAKAFALLLGCLSILGPLGIDMYLPAF--PEIAADLSTPASIVQMTLTLYLLGFAAGQLLWGPLSDRYGRRPVLLLGLFI 79
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1293418642  99 FALFSLAGAVAQSPSQLALMRFLTGLGLGAVMPNCVTLVAEYMPERRKGVMITLMYSGFNVGSGLGGFIAAGLLSHYSWH 178
Cdd:TIGR00710  80 FALSSLGLALSNNIETLLVLRFVQAFGASAGSVISQALVRDIYPGEELSRIYSILMPVLALAPAVAPLLGGYILVWLSWH 159
                         170       180
                  ....*....|....*....|....
gi 1293418642 179 SALIFGGVLPLVVLPFMIVMLPES 202
Cdd:TIGR00710 160 AIFAFLSLAGILLSALIFFILPET 183
MFS_ShiA_like cd17369
Shikimate transporter and similar proteins of the Major Facilitator Superfamily; This ...
61-430 1.76e-11

Shikimate transporter and similar proteins of the Major Facilitator Superfamily; This subfamily is composed of Escherichia coli shikimate transporter (ShiA), inner membrane metabolite transport protein YhjE, and other putative metabolite transporters. ShiA is involved in the uptake of shikimate, an aromatic compound involved in siderophore biosynthesis. It has been suggested that YhjE may mediate the uptake of osmoprotectants. The ShiA-like subfamily belongs to the Metazoan Synaptic Vesicle Glycoprotein 2 (SV2) and related small molecule transporter family (SV2-like) of the Major Facilitator Superfamily (MFS) of membrane transport proteins. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340927 [Multi-domain]  Cd Length: 408  Bit Score: 65.63  E-value: 1.76e-11
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1293418642  61 MGPILGAAMFGVA-----IGALVAGPLSDRYGRKRILLWSVALFAL----------FSLAGAVAqsPSQLALMRFLTGLG 125
Cdd:cd17369    41 AGTLAAFATFGVGflarpLGGVVFGHFGDRIGRKKTLVLTLLLMGIatfligllptYAQIGILA--PILLVLLRLLQGLA 118
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1293418642 126 LGAVMPNCVTLVAEYMPERRKGVMITLMYSGFNVGSGLGG---FIAAGLLSH-----YSWHSALIFGGVLPLVVLpFMIV 197
Cdd:cd17369   119 LGGEWGGAVLMAVEHAPPKRRGFYGSFPQLGAPVGLLLATgvfLLLSALLSDeaflsWGWRIPFLLSAVLVAVGL-YIRL 197
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1293418642 198 MLPESamnmvarrlPGEQIARALNRlggqftaetvfqlnappITRSSKVAQLFRHGYA--RGTIALWLTY-FMGLFVIYL 274
Cdd:cd17369   198 RLEET---------PVFRRAKEAGQ-----------------VVRAPLVEVLRRHWRAllLAIGLRLAENvLFYLFTTFA 251
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1293418642 275 LnGWLPTILrsgGLSLQQAAMMTGLFQLGGPLGGILVGMLMDRASAKAV-IAATYFLGCLCLLSQGLMDFGSAALSVLIF 353
Cdd:cd17369   252 L-SYATQTL---GVDRSTVLLAVLIASVVAAITIPLFGWLSDRVGRRPVyLAGALLAALFAFPFFWLLDTGSTWLIVLAA 327
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1293418642 354 ISG-MCINGAQNGLQ-AYSPAYYQTEIRATGVSwmhgIGRT-GAILSSTLGGMLMLA-VPGHSSIFLVLGLPACLAGICI 429
Cdd:cd17369   328 VVVlGVLHGMMYGPQaAFLAELFPTRVRYTGAS----LGYQlGAILGGGFAPLIATAlVAATGSWWPVALYLAALAVISL 403

                  .
gi 1293418642 430 L 430
Cdd:cd17369   404 V 404
MFS_SV2C cd17440
Synaptic vesicle glycoprotein 2C of the Major Facilitator Superfamily of transporters; ...
33-202 2.35e-11

Synaptic vesicle glycoprotein 2C of the Major Facilitator Superfamily of transporters; Synaptic vesicle glycoprotein 2 (SV2) is a transporter-like integral membrane glycoprotein, with 12 transmembrane regions, expressed in vertebrates and is localized to synaptic and endocrine secretory vesicles. Three isoforms have been identified, SV2A, SV2B, and SV2C. SV2A and SV2B are widely expressed in the brain, while SV2C is more restricted to evolutionarily older brain. SV2 isoforms have been shown to be critical for the proper function of the central nervous system. SV2 serves as the receptor for botulinum neurotoxin A (BoNT/A), one of seven neurotoxins produced by the bacterium Clostridium botulinum. BoNT/A blocks neurotransmitter release by cleaving synaptosome-associated protein of 25 kD (SNAP-25) within presynaptic nerve terminals. SV2C exhibits enriched expression in several basal ganglia nuclei, and has been found to be involved in normal operation of the basal ganglia network and could be also be involved in system adaptation in basal ganglia pathological conditions. SV2C belongs to the Metazoan Synaptic Vesicle Glycoprotein 2 (SV2) and related small molecule transporter family (SV2-like) of the Major Facilitator Superfamily (MFS) of membrane transport proteins. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340998 [Multi-domain]  Cd Length: 479  Bit Score: 65.70  E-value: 2.35e-11
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1293418642  33 IMLDGYDAAVMGFVAPALIEDWGISRAEMGPILGAAMFGVAIGALVAGPLSDRYGRKRILLWSVALFALFSLAGAVAQSP 112
Cdd:cd17440     8 LMADGVEVFVVGFVLPSAETDMCIPNSGSGWLGSIVYLGMMVGAFFWGGLADKVGRRQSLLICMSVNGFFAFLSSFVQGY 87
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1293418642 113 SQLALMRFLTGLGLGAVMPNCVTLVAEYMPERRKGVMITLMYSGFNVGSGLGGFIAAGLLSHYSW----------HSALI 182
Cdd:cd17440    88 GLFLFCRLLSGFGIGGAVPTVFSYFAEVLAREKRGEHLSWLCMFWMIGGIYASAMAWAIIPHYGWsfsmgsayqfHSWRV 167
                         170       180
                  ....*....|....*....|..
gi 1293418642 183 FGGV--LPLVVLPFMIVMLPES 202
Cdd:cd17440   168 FVIVcaLPCVSSVVALTFMPES 189
MFS_MdtG_MDR_like cd17391
Multidrug resistance protein MdtG and similar multidrug resistance (MDR) transporters of the ...
62-179 2.93e-11

Multidrug resistance protein MdtG and similar multidrug resistance (MDR) transporters of the Major Facilitator Superfamily; This subfamily is composed of Escherichia coli multidrug resistance protein MdtG, Streptococcus pneumoniae multidrug resistance efflux pump PmrA, and similar multidrug resistance (MDR) transporters from bacteria. MDR transporters are drug/H+ antiporters (DHA) that mediate the efflux of a variety of drugs and toxic compounds, and confer resistance to these compounds. MdtG confers resistance to fosfomycin and deoxycholate. PmrA serves as an efflux pump for various substrates and is associated with fluoroquinolone resistance. MdtG-like MDR transporters belong to the bacterial MdtG-like and eukaryotic solute carrier 18 (SLC18) family of the Major Facilitator Superfamily (MFS) of transporters. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340949 [Multi-domain]  Cd Length: 380  Bit Score: 64.98  E-value: 2.93e-11
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1293418642  62 GPILGAAMFGVAIGALVAGPLSDRYGRKRILLWSVALFALFSLAGAVAQSPSQLALMRFLTGLGLGAVMPNCVTLVAEYM 141
Cdd:cd17391   243 GLVFSATGVSSLLSAPRLGKLGDRIGHHRILLGALLASALLYIPQAFVQTPWQLGILRFLLGLATGGLLPAINSLLAKIT 322
                          90       100       110
                  ....*....|....*....|....*....|....*...
gi 1293418642 142 PERRKGVMITLMYSGFNVGSGLGGFIAAGLLSHYSWHS 179
Cdd:cd17391   323 PKEVAGRIFGYNQSFQYLGNVAGPLLGSAIAAHFGYRA 360
MFS_LmrB_MDR_like cd17503
Bacillus subtilis lincomycin resistance protein (LmrB) and similar multidrug resistance (MDR) ...
25-197 3.38e-11

Bacillus subtilis lincomycin resistance protein (LmrB) and similar multidrug resistance (MDR) transporters of the Major Facilitator Superfamily; This subfamily is composed of multidrug resistance (MDR) transporters including Bacillus subtilis lincomycin resistance protein LmrB, and several proteins from Escherichia coli such as the putative MDR transporters EmrB, MdtD, and YieQ. MDR transporters are drug/H+ antiporters (DHA) that mediate the efflux of a variety of drugs and toxic compounds, and confer resistance to these compounds. For example, MMR confers resistance to the epoxide antibiotic methylenomycin. This subfamily belongs to the Methylenomycin A resistance protein (also called MMR peptide) and similar multidrug resistance (MDR) transporters (MMR-like MDR transporter) family of the Major Facilitator Superfamily (MFS) of transporters. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 341046 [Multi-domain]  Cd Length: 380  Bit Score: 64.52  E-value: 3.38e-11
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1293418642  25 VLLLCFIIIMldgyDAAVMGFVAPALIEDWGISRAEMGPILGAAMFGVAIGALVAGPLSDRYGRKRILLWSVALFALFSL 104
Cdd:cd17503     1 LLLGAFMAIL----DTTIVNVALPTIMGDLGASLDTVQWVITSYLLALAIMIPLSGWLADRFGTRRLFLTALALFTLGSL 76
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1293418642 105 AGAVAQSPSQLALMRFLTGLGLGAVMPNCVTLVAEYMPERRKGVMITLMYSGFNVGSGLGGFIAAGLLSHYSWHSalIFG 184
Cdd:cd17503    77 LCGLAPNLASLIIFRILQGFGGGVLIPLAQTILLRIYPPEKRGAAMGLVGLVILLAPAIGPTLGGWLTDNLSWRW--IFY 154
                         170
                  ....*....|...
gi 1293418642 185 GVLPLVVLPFMIV 197
Cdd:cd17503   155 INLPIGILALLLA 167
MFS_PhT cd17364
Inorganic Phosphate Transporter of the Major Facilitator Superfamily of transporters; This ...
34-194 3.99e-11

Inorganic Phosphate Transporter of the Major Facilitator Superfamily of transporters; This subfamily is composed of predominantly fungal and plant high-affinity inorganic phosphate transporters (PhT or PiPT), which are involved in the uptake, translocation, and internal transport of inorganic phosphate. They also function in sensing external phosphate levels as transceptors. Phosphate is crucial for structural and metabolic needs, including nucleotide and lipid synthesis, signalling and chemical energy storage. The Pht subfamily belongs to the Metazoan Synaptic Vesicle Glycoprotein 2 (SV2) and related small molecule transporter family (SV2-like) of the Major Facilitator Superfamily (MFS) of membrane transport proteins. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340922 [Multi-domain]  Cd Length: 389  Bit Score: 64.61  E-value: 3.99e-11
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1293418642  34 MLDGYDAAVMGFVAPALIEDWGISRAEMGP-----ILGAAMFGVAIGALVAGPLSDRYGRKRILLWSVALFALFSLAGAV 108
Cdd:cd17364     9 FTDAYDLFSISLVTKILGRLYYGGKGSLPSgvsglVNAAALVGTIIGQLFFGFLGDRFGRKRVYGVELIIMIIGTILSAL 88
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1293418642 109 AQS------PSQLALMRFLTGLGLGAVMPNCVTLVAEYMPERRKGVMITLMYSGFNVGSGLGGFIAAGLLS--------- 173
Cdd:cd17364    89 SPGstplgvMGWLIFFRFLLGIGIGGDYPLSATIMSEYANKKRRGALIAAVFAMQGFGILAGAIVTLILSAifehplpag 168
                         170       180
                  ....*....|....*....|....*.
gi 1293418642 174 -----HYSWHSALIFGGVLPLVVLPF 194
Cdd:cd17364   169 tyhhaDLVWRIVLGLGAIPALSVLYF 194
MFS_MJ1317_like cd17370
MJ1317 and similar transporters of the Major Facilitator Superfamily; This family is composed ...
59-196 1.33e-10

MJ1317 and similar transporters of the Major Facilitator Superfamily; This family is composed of Methanocaldococcus jannaschii MFS-type transporter MJ1317, Mycobacterium bovis protein Mb2288, and similar proteins. They are uncharacterized transporters belonging to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340928 [Multi-domain]  Cd Length: 371  Bit Score: 62.56  E-value: 1.33e-10
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1293418642  59 AEMGPILGAAMFGV-AIGALVAGPLSDRYGRKRILLWSVALFALFSLAGAVAQSPSQLALMRFLTGLGLGAVMPNCVTLV 137
Cdd:cd17370   233 AALIPLLYALFNLVyALAAYPAGRLSDRIGRKKLLILGYLSLALAYLGFALGSSLWLLLLGFILWGLYMGAQESIERAAV 312
                          90       100       110       120       130
                  ....*....|....*....|....*....|....*....|....*....|....*....
gi 1293418642 138 AEYMPERRKGVMITLMYSGFNVGSGLGGFIAAGLLSHYSWHSALIFGGVLPLVVLPFMI 196
Cdd:cd17370   313 ADLVPAELRGTAYGLFNTVVGIGWLLASLIAGYLWDLISPSAAFLFSAVLALIALLLLL 371
MelB COG2211
Na+/melibiose symporter or related transporter [Carbohydrate transport and metabolism];
26-175 1.63e-10

Na+/melibiose symporter or related transporter [Carbohydrate transport and metabolism];


Pssm-ID: 441813 [Multi-domain]  Cd Length: 447  Bit Score: 62.61  E-value: 1.63e-10
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1293418642  26 LLLCFIIIMLDGYDAAVMGFVAPALIEDWGISRAEMGPILGAAMFGVAIGALVAGPLSDRYGRKRILLWSVALFALFSLA 105
Cdd:COG2211   231 LLLLLAYLLFFLALALVAALLLYYFKYVLGLSAALVGLLLALYFLAALLGAPLWPRLAKRFGKKKAFIIGLLLAALGLLL 310
                          90       100       110       120       130       140       150
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1293418642 106 GAVAQ--SPSQLALMRFLTGLGLGAVMPNCVTLVAEYMP-------ERRKGVMITLMYSGFNVGSGLGGFIAAGLLSHY 175
Cdd:COG2211   311 LFFLGpgNLWLLLVLAALAGIGLGAILVLPWAMLADVVDydewktgRRREGLYFGIFTFAIKLGQALAGALAGLLLALF 389
MFS_MefA_like cd06173
Macrolide efflux protein A and similar proteins of the Major Facilitator Superfamily of ...
20-191 2.12e-10

Macrolide efflux protein A and similar proteins of the Major Facilitator Superfamily of transporters; This family is composed of Streptococcus pyogenes macrolide efflux protein A (MefA) and similar transporters, many of which remain uncharacterized. Some members may be multidrug resistance (MDR) transporters, which are drug/H+ antiporters (DHAs) that mediate the efflux of a variety of drugs and toxic compounds, conferring resistance to these compounds. MefA confers resistance to 14-membered macrolides including erythromycin and to 15-membered macrolides. It functions as an efflux pump to regulate intracellular macrolide levels. The MefA-like family belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340863 [Multi-domain]  Cd Length: 383  Bit Score: 62.25  E-value: 2.12e-10
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1293418642  20 RFQWNVLLLCFIIIMLDGYDAAVMGFVAPALIEDWGISRAEMGPILGAAMFGVAIGALVAGPLSDRYGRKRILLWSVALF 99
Cdd:cd06173   205 RRSPLLRLLLLALALFALLGGALTVLLPLLAKEVLGGGAAGYGLLLAAFGVGALLGALLLGRLSKRRRRGRLLLIGALLL 284
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1293418642 100 ALFSLAGAVAQSPSQLALMRFLTGLGLGAVMPNCVTLVAEYMPERRKGVMITLMYSGFNVGSGLGGFIAAGLLSHYSWHS 179
Cdd:cd06173   285 GLALLVLGLSPSLWLLLAALFLLGLAGGLFNVPLNTLLQLRVPDELRGRVFSVYNALNSGAMPLGALLAGLLADALGLSA 364
                         170
                  ....*....|..
gi 1293418642 180 ALIFGGVLPLVV 191
Cdd:cd06173   365 VFLLAGALLLLA 376
MFS_YfcJ_like cd17489
Escherichia coli YfcJ, YhhS, and similar transporters of the Major Facilitator Superfamily; ...
72-196 2.28e-10

Escherichia coli YfcJ, YhhS, and similar transporters of the Major Facilitator Superfamily; This subfamily is composed of Escherichia coli membrane proteins, YfcJ and YhhS, Bacillus subtilis uncharacterized MFS-type transporter YwoG, and similar proteins. YfcJ and YhhS are putative arabinose efflux transporters. YhhS has been implicated glyphosate resistance. YfcJ-like arabinose efflux transporters belong to the bacterial MdtG-like and eukaryotic solute carrier 18 (SLC18) family of the Major Facilitator Superfamily (MFS) of transporters. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 341042 [Multi-domain]  Cd Length: 367  Bit Score: 61.84  E-value: 2.28e-10
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1293418642  72 VAIGALVAGPLSDRYGRKRILLWSVALFALFSLAGAVAQSPSQLALMRFLTGLGLGAVMPNCVTLVAEYMPERRKGVMIT 151
Cdd:cd17489   240 LLLSRPFSGKLSDRKGPKTVIIPGLLLLALGLLLLSFAGSPWMLLLAAVLYGLGFGLLFPALQALAVDLVPPHRRGAANG 319
                          90       100       110       120
                  ....*....|....*....|....*....|....*....|....*
gi 1293418642 152 LMYSGFNVGSGLGGFIAAGLLSHYSWHSALIFGGVLPLVVLPFMI 196
Cdd:cd17489   320 TFFIFFDLGIGLGGLLLGLVAELFGYRAMFLLAAVVVLLALVLYI 364
MFS_GLUT10_12_Class3_like cd17362
Glucose transporter (GLUT) types 10 and 12, Class 3 GLUTs, and similar transporters of the ...
53-202 2.39e-10

Glucose transporter (GLUT) types 10 and 12, Class 3 GLUTs, and similar transporters of the Major Facilitator Superfamily; This subfamily is composed of glucose transporter type 10, GLUT12, plant polyol transporters (PLTs), and similar proteins. GLUTs, also called Solute carrier family 2, facilitated glucose transporters (SLC2A), are a family of proteins that facilitate the transport of hexoses such as glucose and fructose. There are fourteen GLUTs found in humans; they display different substrate specificities and tissue expression. They have been categorized into three classes based on sequence similarity: Class 1 (GLUTs 1-4, 14); Class 2 (GLUTs 5, 7, 9, and 11); and Class 3 (GLUTs 6, 8, 10, 12, and HMIT). GLUT proteins are comprised of about 500 amino acid residues, possess a single N-linked oligosaccharide, and have 12 transmembrane segments. They belong to the Glucose transporter -like (GLUT-like) family of the Major Facilitator Superfamily (MFS) of membrane transport proteins. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340920 [Multi-domain]  Cd Length: 389  Bit Score: 61.98  E-value: 2.39e-10
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1293418642  53 DW-GISRAEMGPILGAAMFGVAIGALVAGPLSDRYGRKRILLWSVALFALFSLAGAVAQSPSQLALMRFLTGLGLGAVMP 131
Cdd:cd17362    32 DWyNLSSLQSGLVVSGSLLGALLGSLVAGALIDRLGRRKELILAALLYLVGSLVTGLAPSYPVLLVGRLIYGVGIGLAMH 111
                          90       100       110       120       130       140       150
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1293418642 132 NCVTLVAEYMPERRKGVMITLmYSGFNVGSGLGGFIAAGLLSHYSWHSALIFG-GVLPLVVLPFMIVMLPES 202
Cdd:cd17362   112 AAPVYIAETSPSHIRGLLVSL-KELFIVLGILLGYVSGYAFADVVGGWRYMYGlAAPPALLLGIGMWFLPPS 182
PRK11102 PRK11102
Bcr/CflA family multidrug efflux MFS transporter;
48-124 6.66e-10

Bcr/CflA family multidrug efflux MFS transporter;


Pssm-ID: 182964 [Multi-domain]  Cd Length: 377  Bit Score: 60.70  E-value: 6.66e-10
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1293418642  48 PALIEDWGISRAEMGPILGAAMFGVAIGALVAGPLSDRYGRKRILLWSVALFALFSLAGAVAQSPSQLALMRFLTGL 124
Cdd:PRK11102   15 PVIAADFGVSAGSVQMTLSAYILGFAIGQLFYGPMADSFGRKPVILGGTLVFALAAVACALAQTIDQLIYMRFLHGL 91
MFS_SLC22A7_OAT2 cd17447
Solute carrier family 22 member 7 (also called Organic anion transporter 2) of the Major ...
71-167 7.99e-10

Solute carrier family 22 member 7 (also called Organic anion transporter 2) of the Major Facilitator Superfamily of transporters; Solute carrier family 22 member 7 (SLC22A7), also called organic anion transporter 2 (OAT2) mediates sodium-independent transport of a variety of organic anions including prostaglandin E2, prostaglandin F2, tetracycline, bumetanide, estrone sulfate, glutarate, dehydroepiandrosterone sulfate, allopurinol, 5-fluorouracil, paclitaxel, L-ascorbic acid, salicylate, ethotrexate, and alpha-ketoglutarate. It also plays a role in renal uric acid uptake from blood as a first step of tubular secretion. OAT2 belongs to the Solute carrier 22 (SLC22) family of organic cation/anion/zwitterion transporters of the Major Facilitator Superfamily (MFS)of membrane transport proteins. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 341005 [Multi-domain]  Cd Length: 341  Bit Score: 60.13  E-value: 7.99e-10
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1293418642  71 GVAIGALVAGPLSDRYGRKRILLWSVALFALFSLAGAVAQSPSQLALMRFLTGLGLGAVMPNCVTLVAEYMP-ERRK--G 147
Cdd:cd17447    47 GVTMGAVAFGYLSDRFGRKRMLLVAYVLSLVFGLASAFSVSYVMFAITRTLTGFALTGFSIISMVLCVEWVDiEHRTvaG 126
                          90       100
                  ....*....|....*....|
gi 1293418642 148 VMITLMYSGFNVGSGLGGFI 167
Cdd:cd17447   127 VLISLFWTVGNMLLALVAYL 146
MFS_HMIT_like cd17360
H(+)-myo-inositol cotransporter and similar transporters of the Major Facilitator Superfamily; ...
64-202 1.04e-09

H(+)-myo-inositol cotransporter and similar transporters of the Major Facilitator Superfamily; This subfamily is composed of myo-inositol/inositol transporters and similar transporters from vertebrates, plant, and fungi. The human protein is called H(+)-myo-inositol cotransporter/Proton myo-inositol cotransporter (HMIT), or H(+)-myo-inositol symporter, or Solute carrier family 2 member 13 (SLC2A13). HMIT is classified as a Class 3 GLUT (glucose transporter) based on sequence similarity with GLUTs, but it does not transport glucose. It specifically transports myo-inositol and is expressed predominantly in the brain, with high expression in the hippocampus, hypothalamus, cerebellum and brainstem. HMIT may be involved in regulating processes that require high levels of myo-inositol or its phosphorylated derivatives, such as membrane recycling, growth cone dynamics, and synaptic vesicle exocytosis. Arabidopsis Inositol transporter 4 (AtINT4) mediates high-affinity H+ symport of myo-inositol across the plasma membrane. The HMIT-like subfamily belongs to the Glucose transporter -like (GLUT-like) family of the Major Facilitator Superfamily (MFS) of membrane transport proteins. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340918 [Multi-domain]  Cd Length: 362  Bit Score: 59.98  E-value: 1.04e-09
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1293418642  64 ILGAAMFGVAIGALVAGPLSDRYGRKRILLWSVALFALFSLAGAVAQSPSQLALMRFLTGLGLGAVMPNCVTLVAEYMPE 143
Cdd:cd17360    40 IVSSTVAGAAVGAAIGGWLNDRFGRRPCILLADALFTIGAIVMAAAPNKEVLIVGRVLVGLGVGIASMTVPLYIAEAAPP 119
                          90       100       110       120       130       140
                  ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1293418642 144 RRKGVMITLmYSGFNVGSGLGGFIAAGLLSHY--SWHSALIFGGVlPLVVLPFMIVMLPES 202
Cdd:cd17360   120 RIRGRLVTI-NVLFITGGQFVAYVINGAFSYLpgGWRWMLGLAAV-PAVLQFIGLLFLPES 178
MFS_PLT cd17437
Plant Polyol transporter family of the Major Facilitator Superfamily of transporters; The ...
31-202 1.15e-09

Plant Polyol transporter family of the Major Facilitator Superfamily of transporters; The plant Polyol transporter (PLT) subfamily includes PLT1-6 from Arabidopsis thaliana and similar transporters. The best characterized member of the group is Polyol transporter 5, also called Sugar-proton symporter PLT5, which mediates the H+-symport of numerous substrates including linear polyols (such as sorbitol, xylitol, erythritol or glycerol), cyclic polyol myo-inositol, and different hexoses, pentoses (including ribose), tetroses, and sugar alcohols. It functions to transport a wide range of substrates into specific sink tissues in the plant. The PLT subfamily belongs to the Glucose transporter -like (GLUT-like) family of the Major Facilitator Superfamily (MFS) of membrane transport proteins. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340995 [Multi-domain]  Cd Length: 387  Bit Score: 59.72  E-value: 1.15e-09
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1293418642  31 IIIMLDGYDAAVMGFVAPALIEDWGISRAEMGPILGAAMFGVAIGALVAGPLSDRYGRKrillWSVALFALFSLAGAV-- 108
Cdd:cd17437     4 LNSILLGYDIGVMSGAVIFIKEDLKISDVQEEVLIGSLNIISLVGSLAAGRTSDWIGRR----YTIALAALIFFVGALlm 79
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1293418642 109 AQSPSQLALM--RFLTGLGLGAVMPNCVTLVAEYMPERRKGVMITLMYSGFNVGSGLG---GFIAAGLLSHYSWHsaLIF 183
Cdd:cd17437    80 GVAPNYPVLMvgRFVAGIGVGFALMIAPVYTAEVAPASSRGFLTSFPEIFINIGILLGyvsNYAFSGLPLHVGWR--LML 157
                         170       180
                  ....*....|....*....|
gi 1293418642 184 G-GVLPLVVLPFMIVMLPES 202
Cdd:cd17437   158 GvGAVPSLFLAIGVLAMPES 177
MFS_Amf1_MDR_like cd17476
Saccharomyces cerevisiae low affinity ammonium transporter Amf1p/YOR378W, aminotriazole ...
67-177 1.88e-09

Saccharomyces cerevisiae low affinity ammonium transporter Amf1p/YOR378W, aminotriazole resistance protein Atr1p, and similar transporters of the Major Facilitator Superfamily; Saccharomyces cerevisiae Amf1p/Ammonium Facilitator 1/YOR378W functions as a low affinity NH4+ transporter. S. cerevisiae aminotriazole resistance protein (Atr1p) is required for controlling sensitivity to aminotriazole; it is a putative component of the machinery responsible for pumping aminotriazole (and possibly other toxic compounds) out of the cell. This subfamily also includes S. cerevisiae YMR279C, a putative boron transporter involved in boron efflux and resistance, and Kluyveromyces lactis Knq1p which is involved in oxidative stress response and iron homeostasis. Amf1p, Atr1p, and YMR279C have been classified as group 1 members of the DHA2 (Drug:H+ Antiporter family 2) family, K. lactis Knq1 as group 2. This subfamily also includes two Aspergillus terreus terrein biosynthesis cluster proteins, efflux pump TerG and TerJ which may be required for efficient secretion of terrein or other secondary metabolites produced by the terrein gene cluster. The Amf1p-like subfamily belongs to the Methylenomycin A resistance protein (also called MMR peptide) and similar multidrug resistance (MDR) transporters (MMR-like MDR transporter) family of the Major Facilitator Superfamily (MFS) of transporters. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 341029 [Multi-domain]  Cd Length: 362  Bit Score: 59.20  E-value: 1.88e-09
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1293418642  67 AAMFGVAIGA--LVAGPLSDRYGRKRILLWSVALFALFSLAGAVAQSPSQLALMRFLTGLGLGAVMPNCVTLVAE-YMPE 143
Cdd:cd17476    39 AASYSLTVGTfiLIFGRLGDIYGHKKMFVIGSFWFAIWSLIAGFSPNFIFFIICRALQGLGPAFLLPNAMALLGRtYPPG 118
                          90       100       110
                  ....*....|....*....|....*....|....
gi 1293418642 144 RRKGVMITLMYSGFNVGSGLGGFIAAGLLSHYSW 177
Cdd:cd17476   119 PRKNIVFSLFGATAPLGFALGGVFGGLFAQLAWW 152
MFS_YcxA_like cd17355
MFS-type transporter YcxA and similar proteins of the Major Facilitator Superfamily of ...
40-199 2.07e-09

MFS-type transporter YcxA and similar proteins of the Major Facilitator Superfamily of transporters; This group is composed of uncharacterized bacterial MFS-type transporters including Bacillus subtilis YcxA and YbfB. YcxA has been shown to facilitate the export of surfactin in B. subtilis. The YcxA-like group belongs to the Monocarboxylate transporter -like (MCT-like) family of the Major Facilitator Superfamily (MFS) of membrane transport proteins. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340913 [Multi-domain]  Cd Length: 386  Bit Score: 59.21  E-value: 2.07e-09
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1293418642  40 AAVMGFVA--PALIEDWGISRAEMGPILGAAMFGVAIGALVAGPLSDRYGRKRILLWSVALFALFSLAGAVAQSPSQLAL 117
Cdd:cd17355   224 FAVVGLIVhlVPYLADRGISPAAAAVALALIGLFNIVGRLLSGWLGDRYSPRRLLAASYALRALGLALLLLLPFPPLALL 303
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1293418642 118 M-RFLTGLGLGAVMPNCVTLVAEYMPERRKGVMITLMYSGFNVGSGLGGFIAAGLLSHYSWHSALIFGGVLPLVVLPFMI 196
Cdd:cd17355   304 LfAALFGLGWGATVPLTAALAARYFGARSYGTLFGLVFAPHQLGSALGPWLGGLLYDRTGSYTAAWALAVALGLIAALLV 383

                  ...
gi 1293418642 197 VML 199
Cdd:cd17355   384 LPI 386
MFS_NIMT_CynX_like cd17339
2-nitroimidazole and cyanate transporters and similar proteins of the Major Facilitator ...
41-336 3.63e-09

2-nitroimidazole and cyanate transporters and similar proteins of the Major Facilitator Superfamily of transporters; This family is composed of Escherichia coli 2-nitroimidazole transporter (NIMT) and cyanate transport protein CynX, and similar proteins. NIMT, also called YeaN, confers resistance to 2-nitroimidazole, the antibacterial and antifungal antibiotic, by mediating the active efflux of this compound. CynX is part of an active transport system that transports exogenous cyanate into E. coli cells. The NIMT/CynX-like family belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340897 [Multi-domain]  Cd Length: 374  Bit Score: 58.36  E-value: 3.63e-09
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1293418642  41 AVMGFVAPALIEDWGISRAEMGPI--LGAAMFGVAigALVAGPLSDRYGRKRILLWSVALFAlfslAGAVAQSPSQLALM 118
Cdd:cd17339    16 TSVGPLLPEIRDDLGLSASQAGLLttLPLLCFAVF--SPLAPRLARRFGLERTLLLALLLLA----AGILLRSLGGIALL 89
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1293418642 119 RFLTGL-GLGAVMPNCV--TLVAEYMPERRkGVMITLMYSGFNVGSGLGGFIAAGL--LSHYSWHSALIFGGVLPLVVLp 193
Cdd:cd17339    90 FLGTALaGAGIAVGNVLlpSLIKRDFPRRV-GLMTGLYTTSMNLGAALASGLSVPLaqALGGGWRGALAIWALPALLAL- 167
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1293418642 194 fmIVMLPesamnmvarrlpgeqiaralNRLGGQFTAETVFQLNAPPITRSSkvaqlfrhgyargtIALWLTYFMGL--FV 271
Cdd:cd17339   168 --LIWLP--------------------QLRRRKRAAAAAAPLTKISVWRSP--------------LAWQVTLFMGLqsLL 211
                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1293418642 272 IYLLNGWLPTILRSGGLSLQQAAMMTGLFQLGGPLGGILVGMLMDRA----SAKAVIAATYFLGCLCLL 336
Cdd:cd17339   212 FYTLMAWLPTILIDAGLSAATAGWLLSLFQLVGIPASLLVPILATRLknqrPIVVLLAVLFIIGVLGLL 280
MFS cd06174
Major Facilitator Superfamily; The Major Facilitator Superfamily (MFS) is a large and diverse ...
20-194 4.13e-09

Major Facilitator Superfamily; The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of substrates including ions, sugar phosphates, drugs, neurotransmitters, nucleosides, amino acids, and peptides. They do so using the electrochemical potential of the transported substrates. Uniporters transport a single substrate, while symporters and antiporters transport two substrates in the same or in opposite directions, respectively, across membranes. MFS proteins are typically 400 to 600 amino acids in length, and the majority contain 12 transmembrane alpha helices (TMs) connected by hydrophilic loops. The N- and C-terminal halves of these proteins display weak similarity and may be the result of a gene duplication/fusion event. Based on kinetic studies and the structures of a few bacterial superfamily members, GlpT (glycerol-3-phosphate transporter), LacY (lactose permease), and EmrD (multidrug transporter), MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement. Bacterial members function primarily for nutrient uptake, and as drug-efflux pumps to confer antibiotic resistance. Some MFS proteins have medical significance in humans such as the glucose transporter Glut4, which is impaired in type II diabetes, and glucose-6-phosphate transporter (G6PT), which causes glycogen storage disease when mutated.


Pssm-ID: 349949 [Multi-domain]  Cd Length: 378  Bit Score: 58.21  E-value: 4.13e-09
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1293418642  20 RFQWNVLLLCFIIIMLDGYDAAVMGFVAPALIEDWGISRAEMGPILGAAMFGVAIGALVAGPLSDRY-GRKRILLWSVAL 98
Cdd:cd06174   200 LKNPGLWLLLLAIFLVNLAYYSFSTLLPLFLLDLGGLSVAVAGLLLSLFGLAGALGSLLLGLLSDRLiGRKPLLLIGLLL 279
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1293418642  99 FALFSLAGAVAQSPSQLALMRFLTGLGLGAVMPNCVTLVAEYMPERRKGVMITLMYSGFNVGSGLGGFIAAGLLS-HYSW 177
Cdd:cd06174   280 MALGLALLLLAPSLLLLLLLLLLLGFGLGGLLPLSFALIAELFPPEIRGTAFGLLNTFGFLGGAIGPLLAGFLLAaTFGL 359
                         170
                  ....*....|....*..
gi 1293418642 178 HSALIFGGVLPLVVLPF 194
Cdd:cd06174   360 TGAFLVLAVLLLLAAIL 376
MFS_YjiJ cd06180
Uncharacterized protein YjiJ and similar proteins of the Major Facilitator Superfamily of ...
48-203 6.26e-09

Uncharacterized protein YjiJ and similar proteins of the Major Facilitator Superfamily of transporters; This family is composed of Escherichia coli YjiJ and other uncharacterized proteins. They belong to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340869 [Multi-domain]  Cd Length: 371  Bit Score: 57.70  E-value: 6.26e-09
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1293418642  48 PALIEDWGISRAEMGPILGAAMFGVAIGALVAGPLSDRYGRKRILLWSVALFALFSLAGAVAQSPSQLALMRFLTGLGLG 127
Cdd:cd06180    23 PLMLAELGLSYAQAGWIATANYAGYLVGALLASFLRRRGRARRLIRGGLLLTVLLLAAMALTSGFAALLALRFLAGAASA 102
                          90       100       110       120       130       140       150
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1293418642 128 AVMPNCVTLVAEYMPERRKGVMITLMYSGFNVGSGLGGFIAAGLLSH-YSWHSALIFGGVLPLVVLPFMIVMLPESA 203
Cdd:cd06180   103 FVFVFGSNLVLHHATAAGRGHLIGLLFAGVGLGIALSGLLVPAGLGGgLSWRAGWLALALLSAVLLLLSFLLLRRGP 179
MFS_GLUT_Class1_2_like cd17357
Class 1 and Class 2 Glucose transporters (GLUTs) of the Major Facilitator Superfamily; This ...
70-202 7.34e-09

Class 1 and Class 2 Glucose transporters (GLUTs) of the Major Facilitator Superfamily; This subfamily includes Class 1 and Class 2 glucose transporters (GLUTs) including Solute carrier family 2, facilitated glucose transporter member 1 (SLC2A1, also called glucose transporter type 1 or GLUT1), SLC2A2-5 (GLUT2-5), SLC2A7 (GLUT7), SLC2A9 (GLUT9), SLC2A11 (GLUT11), SLC2A14 (GLUT14), and similar proteins. GLUTs are a family of proteins that facilitate the transport of hexoses such as glucose and fructose. There are fourteen GLUTs found in humans; they display different substrate specificities and tissue expression. They have been categorized into three classes based on sequence similarity: Class 1 (GLUTs 1-4, 14); Class 2 (GLUTs 5, 7, 9, and 11); and Class 3 (GLUTs 6, 8, 10, 12, and HMIT). GLUTs 1-5 are the most thoroughly studied and are well-established as glucose and/or fructose transporters in various tissues and cell types. GLUT proteins are comprised of about 500 amino acid residues, possess a single N-linked oligosaccharide, and have 12 transmembrane segments. They belong to the Glucose transporter -like (GLUT-like) family of the Major Facilitator Superfamily (MFS) of membrane transport proteins. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340915 [Multi-domain]  Cd Length: 447  Bit Score: 57.66  E-value: 7.34e-09
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1293418642  70 FGVAIGALVAGPLSDRYGRKRILLWSVALF---ALFSLAGAVAQSPSQLALMRFLTGLGLGAVMPNCVTLVAEYMPERRK 146
Cdd:cd17357    60 IGGAIGSFISAFLANRFGRKNGLLISNALLvvsSLLMFLSKSAKSPELLIFGRFLVGIACGLSTGFVPMYLQEISPSELR 139
                          90       100       110       120       130
                  ....*....|....*....|....*....|....*....|....*....|....*...
gi 1293418642 147 GVMITLMYSGFNVGSGLGGFIAAGLL--SHYSWHSALiFGGVLPLVVLPFMIVMLPES 202
Cdd:cd17357   140 GALGSLTQIGVTLGILLGQVFGLPSVlgTETLWPYLL-FFPGIPALLQLAALPFFPES 196
MFS_KgtP cd17367
Alpha-ketoglutarate permease of the Major Facilitator Superfamily of transporters; This ...
74-202 9.46e-09

Alpha-ketoglutarate permease of the Major Facilitator Superfamily of transporters; This subfamily includes Escherichia coli alpha-ketoglutarate permease (KgtP) and similar proteins. KgtP is a constitutively expressed proton symporter that functions in the uptake of alpha-ketoglutarate across the boundary membrane. Also included is a putative transporter from Pseudomonas aeruginosa named dicarboxylic acid transporter PcaT. The KgtP subfamily belongs to the Metazoan Synaptic Vesicle Glycoprotein 2 (SV2) and related small molecule transporter family (SV2-like) of the Major Facilitator Superfamily (MFS) of membrane transport proteins. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340925 [Multi-domain]  Cd Length: 407  Bit Score: 57.30  E-value: 9.46e-09
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1293418642  74 IGALVAGPLSDRYGRKRILLWSVALFALFSLAGAVAQS--------PSQLALMRFLTGLGLGAVMPNCVTLVAEYMPERR 145
Cdd:cd17367    55 IGGWLFGRLADRIGRRAALTLSVSLMAAGSLVIAVTPTyatigiwaPIILLLARLLQGLSVGGEYGTSATYLSEVAPPGR 134
                          90       100       110       120       130       140
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1293418642 146 KGVMITLMYSGFNVGSGLGGFIAAGL--------LSHYSWHSALIFGGVLPLVVLpFMIVMLPES 202
Cdd:cd17367   135 RGFYSSFQYVTLIGGQLLALGVLLVLqhtlgedqMAAWGWRIPFLLGGVLAVVVL-WLRRGLEET 198
MFS_SLC37A4 cd17343
Solute carrier family 37 member 4 of the Major Facilitator Superfamily of transporters; Solute ...
45-321 9.58e-09

Solute carrier family 37 member 4 of the Major Facilitator Superfamily of transporters; Solute carrier family 37 member 4 (SLC37A4), one of four SLC37 family proteins in vertebrates, is better known as glucose-6-phosphate transporter (G6PT). It is also called sugar phosphate exchanger 4 (SPX4), G6P translocase, or transformation-related gene 19 protein (TRG-19). G6PT is a phosphate (Pi)-linked G6P antiporter, catalyzing G6P:Pi and Pi:Pi exchanges. Deficiencies in human G6PT lead to glycogen storage disease type Ib (GSD-Ib), which is a metabolic and immune disorder. G6PT is a member of the Organophosphate:Pi antiporter (OPA)/SLC37 family, whose members are integral membrane proteins responsible for the transport of specific organophosphates or sugar phosphates across biological membranes with the simultaneous translocation of inorganic phosphate into the opposite direction. The OPA/SLC37 family belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340901 [Multi-domain]  Cd Length: 409  Bit Score: 56.96  E-value: 9.58e-09
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1293418642  45 FVAPALIEDWGISRAEMGPILGAAMFGVAIGALVAGPLSDRYGRKRILLWSVALFALFSLAGAVAQSPSQLALMRFLTGL 124
Cdd:cd17343    24 FVLPSLMNELGLDKSDLGLITSSQSLAYAISKFIGGVLSDQISARWLFSSGLVLSGLTTVAFSGSSSVWVFSILWFLNGL 103
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1293418642 125 GLGAVMPNCVTLVAEYMPERRKGVMITLMYSGFNVGSGLGGFIAAGLLSHYSWHSALIFGGVLPLVVLPFMIVMLPESam 204
Cdd:cd17343   104 AQGLGWPPCAKILRKWFSPSQFGTWWSVLSTSMNLAGSLGPILATLLALSYGWRSTLSISGTVAVVMSVVCLLFIKNE-- 181
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1293418642 205 nmvarrlPGEqiaRALNrlggQFTAETVFQLNAPPITRSSKVAQLFRHGYargtiaLWL--TYFMGLFVI---YLLNGWL 279
Cdd:cd17343   182 -------PSD---VGLN----NIEEEESKGKKKKSPRGESTLKELLLSPF------LWLlsLGYLVVFGVktaVTDWGQL 241
                         250       260       270       280
                  ....*....|....*....|....*....|....*....|..
gi 1293418642 280 pTILRSGGLSLQQAAMMTGLFQLGGPLGGILVGMLMDRASAK 321
Cdd:cd17343   242 -FLIQDKGQSALTGSSFMSSLEVGGFVGSIAAGYLSDWAVAK 282
AraJ COG2814
Predicted arabinose efflux permease AraJ, MFS family [Carbohydrate transport and metabolism];
259-431 9.74e-09

Predicted arabinose efflux permease AraJ, MFS family [Carbohydrate transport and metabolism];


Pssm-ID: 442063 [Multi-domain]  Cd Length: 348  Bit Score: 56.91  E-value: 9.74e-09
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1293418642 259 IALWLTYFMGLFVIYLLNGWLPTILRSGGLSLQQAAMMTGLFQLGGPLGGILVGMLMDRASAKAVIAATYFLGCLCLLSQ 338
Cdd:COG2814    13 LALALGAFLSGLGIGIVLPALPLIAADLGASPAQAGLVVTAYLLGAALGAPLAGRLADRFGRRRVLLLGLLLFALGSLLC 92
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1293418642 339 GLMDfGSAALSVLIFISGMCINGAQNGLQAYSPAYYQTEIRATGVSWMHGIGRTGAILSSTLGGMLMLAVpGHSSIFLVL 418
Cdd:COG2814    93 ALAP-SLWLLLAARFLQGLGAGALFPAALALIADLVPPERRGRALGLLGAGLGLGPALGPLLGGLLADLF-GWRWVFLVN 170
                         170
                  ....*....|...
gi 1293418642 419 GLPACLAGICILL 431
Cdd:COG2814   171 AVLALLALLLLLR 183
MFS_FucP_MFSD4_like cd17333
Bacterial fucose permease, eukaryotic Major facilitator superfamily domain-containing protein ...
29-356 1.27e-08

Bacterial fucose permease, eukaryotic Major facilitator superfamily domain-containing protein 4, and similar proteins; This family is composed of bacterial L-fucose permease (FucP), eukaryotic Major facilitator superfamily domain-containing protein 4 (MFSD4) proteins, and similar proteins. L-fucose permease facilitates the uptake of L-fucose across the boundary membrane with the concomitant transport of protons into the cell; it can also transport L-galactose and D-arabinose. The MFSD4 subfamily consists of two vertebrate members: MFSD4A and MFSD4B. The function of MFSD4A is unknown. MFSD4B is more commonly know as Sodium-dependent glucose transporter 1 (NaGLT1), a primary fructose transporter in rat renal brush-border membranes that also facilitates sodium-independent urea uptake. The FucP/MFSD4 family belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340891 [Multi-domain]  Cd Length: 372  Bit Score: 56.56  E-value: 1.27e-08
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1293418642  29 CFIIIMLDGYDAAVMGFVAPALIEDWGISRAEMGPILGAAMFGVAIGALVAGPLSDRYGRKRILLWSVALFALFSLAGAV 108
Cdd:cd17333     1 LYISFFSNGLTDALLGILGPSLEEAFNLNVADVSVIFSSQNAGYLIGSLLAGFLMKRLGRRRTLILGLLLISLALALIFA 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1293418642 109 AQSPSQLALMRFLTGLGLGAVMPNCVTLVAEyMPERRKGVMITLMYSGFNVGSGLGGFIAAGLLSHYSWHSA--LIFGGV 186
Cdd:cd17333    81 TPSIYLFVVLMFLAGLGAGILDTGANTFVGA-LFEESSATRLNVLHGFFGLGALIGPLIATSLLTSELSWSWayLIIGLI 159
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1293418642 187 LPLVVLPFMIVMLPESAMNMVARRLPGEQIARALNRLGGqftaetvfqlnappitrsskvaqlfrhgyaRGTIALWLTYF 266
Cdd:cd17333   160 YLLLAILILLTLFPELPSARNPQQSVGAFSASASRLLRN------------------------------PSIILGALALF 209
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1293418642 267 MGLFVIYLLNGWLPTIL-RSGGLSLQQAAMMTGLFQLGGPLGGILVGMLMDRASAKAVIAATYFLGCLCLLSQGLMDFGs 345
Cdd:cd17333   210 LYVGAETAFSSWVPSYLvEKKHVSDGLAGYLLSGFWVGITIGRLLGGPISRRIKPHTLLVLSGSGALLGLLILLLAPTL- 288
                         330
                  ....*....|.
gi 1293418642 346 AALSVLIFISG 356
Cdd:cd17333   289 VVGLVATALLG 299
MFS_1 pfam07690
Major Facilitator Superfamily;
24-164 1.88e-08

Major Facilitator Superfamily;


Pssm-ID: 429598 [Multi-domain]  Cd Length: 344  Bit Score: 55.89  E-value: 1.88e-08
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1293418642  24 NVLLLCFIIIMLDGYDAAVMGFVAPALIEDWGISRAEMGPILGAAMFGVAIGALVAGPLSDRYGRKRILLWSVALFALFS 103
Cdd:pfam07690 200 DPVLWLLLALLLFGFAFFGLLTYLPLYQEVLGLSALLAGLLLGLGGLLGAIGRLLLGRLSDRLGRRRRLLLALLLLILAA 279
                          90       100       110       120       130       140
                  ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1293418642 104 LAGAVAQSPSQLALMR---FLTGLGLGAVMPNCVTLVAEYMPERRKGVMITLMYSGFNVGSGLG 164
Cdd:pfam07690 280 LGLLLLSLTLSSLWLLlalLLLGFGFGLVFPALNALVSDLAPKEERGTASGLYNTAGSLGGALG 343
PRK15402 PRK15402
MdfA family multidrug efflux MFS transporter;
80-127 2.16e-08

MdfA family multidrug efflux MFS transporter;


Pssm-ID: 185300 [Multi-domain]  Cd Length: 406  Bit Score: 56.10  E-value: 2.16e-08
                          10        20        30        40
                  ....*....|....*....|....*....|....*....|....*...
gi 1293418642  80 GPLSDRYGRKRILLWSVALFALFSLAGAVAQSPSQLALMRFLTGLGLG 127
Cdd:PRK15402   69 GPLSDRIGRRPVMLAGVAFFILTCLAILLAQSIEQFTLLRFLQGIGLC 116
MFS_GlpT cd17345
Glycerol-3-Phosphate Transporter of the Major Facilitator Superfamily of transporters; ...
47-317 4.34e-08

Glycerol-3-Phosphate Transporter of the Major Facilitator Superfamily of transporters; Glycerol-3-Phosphate Transporter (also called GlpT or G-3-P permease) is responsible for glycerol-3-phosphate uptake. It is part of the Organophosphate:Pi antiporter (OPA) family of integral membrane proteins responsible for the transport of specific organophosphates or sugar phosphates across biological membranes with the simultaneous translocation of inorganic phosphate into the opposite direction. The GlpT group belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340903 [Multi-domain]  Cd Length: 411  Bit Score: 54.94  E-value: 4.34e-08
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1293418642  47 APALIEDWGISRAEMGPILGAAMFGVAIGALVAGPLSDRYGRKRI----LLWSVALFALFSLAGAVAQSPSQLALMRFLT 122
Cdd:cd17345    26 QPYLIEQYGLSKTEIGLIGSALSIAYGLSKFVMGNLSDRSNPKRFlaigLILSAIINILIGFVPSATSSVGLMFILLFLN 105
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1293418642 123 GLGLGAVMPNCVTLVAEYMPERRKGVMITLMYSGFNVGSGLGGFIA---AGLLSHYSWHSALIFGGVLPLVVLPFMIVML 199
Cdd:cd17345   106 GWFQGMGWPPSGRTMVHWFSKKERGTWTSIWNISHNVGGGLVGPLAglgLAIFGDGWWRGAFIFPAIIAIIVAVIVLFLG 185
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1293418642 200 ---PESAMNMVARRLPGEQIARALNRLGGQftaetvfQLNAPPITRSskvaqlfrhgYARGTIALWLTYFMGLFVIYLLN 276
Cdd:cd17345   186 kdtPESEGLPPIEEYKGDYPEEADGEEEEQ-------ELSAWEIFVK----------YVLKNKLLWYIAIANVFVYLVRY 248
                         250       260       270       280
                  ....*....|....*....|....*....|....*....|....*
gi 1293418642 277 G---WLPTIL-RSGGLSLQQAAMMTGLFQLGGPLGGILVGMLMDR 317
Cdd:cd17345   249 GildWAPTYLsEVKGFSKAQAMWAFSLFEWAAIPGTLLAGWLSDK 293
MFS_1 pfam07690
Major Facilitator Superfamily;
261-445 7.25e-08

Major Facilitator Superfamily;


Pssm-ID: 429598 [Multi-domain]  Cd Length: 344  Bit Score: 53.96  E-value: 7.25e-08
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1293418642 261 LWLTYFMGLFVIYLLNGWLPTILRSG-GLSLQQAAMMTGLFQLGGPLGGILVGMLMDRASAKAVIAATYFLGCLCLLSqG 339
Cdd:pfam07690   1 LFLAAFLAALGRSLLGPALPLLLAEDlGISPTEIGLLLTLFSLGYALAQPLAGRLSDRFGRRRVLLIGLLLFALGLLL-L 79
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1293418642 340 LMDFGSAALSVLIFISGMCINGAQNGLQAYSPAYYQTEIRATGVSWMHGIGRTGAILSSTLGGMLmLAVPGHSSIFLVLG 419
Cdd:pfam07690  80 LFASSLWLLLVLRVLQGLGAGALFPAALALIADWFPPEERGRALGLVSAGFGLGAALGPLLGGLL-ASLFGWRAAFLILA 158
                         170       180
                  ....*....|....*....|....*.
gi 1293418642 420 LPACLAGICILLHRMNHAKPRLTEAE 445
Cdd:pfam07690 159 ILSLLAAVLLLLPRPPPESKRPKPAE 184
MFS_MefA_like cd06173
Macrolide efflux protein A and similar proteins of the Major Facilitator Superfamily of ...
57-431 7.96e-08

Macrolide efflux protein A and similar proteins of the Major Facilitator Superfamily of transporters; This family is composed of Streptococcus pyogenes macrolide efflux protein A (MefA) and similar transporters, many of which remain uncharacterized. Some members may be multidrug resistance (MDR) transporters, which are drug/H+ antiporters (DHAs) that mediate the efflux of a variety of drugs and toxic compounds, conferring resistance to these compounds. MefA confers resistance to 14-membered macrolides including erythromycin and to 15-membered macrolides. It functions as an efflux pump to regulate intracellular macrolide levels. The MefA-like family belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340863 [Multi-domain]  Cd Length: 383  Bit Score: 54.16  E-value: 7.96e-08
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1293418642  57 SRAEMGPILGAAMFGVAIGALVAGPLSDRYGRKRILLWSVALFALFSLAGAVA-----QSPSQLALMRFLTGLGLGAVMP 131
Cdd:cd06173    32 SALLVGLVLAAFFLPFLLFSPFAGVLADRFDRRRLLILADLLRALLAAVLALLallgsLSLWLLLVLAFLLGIASAFFGP 111
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1293418642 132 NCVTLVAEYMPERRKGVMITLMYSGFNVGSGLGGFIAAGLLSHYSWHSALIFGGVLPLVVLPFMIVMlpesamnmvarRL 211
Cdd:cd06173   112 ARQALLPELVPKEQLVRANALNSLATQLARIIGPALGGLLVALLGPGGAFAINALSFLLSALLLLFI-----------RR 180
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1293418642 212 PGEQIARALNRLGGQFTAETVFQLNAPPITRSSKVAQLFrhgyargtIALWLTYFMGLFVIYllngwlptILRSGGLSLQ 291
Cdd:cd06173   181 PPPAAPGESSSLLLRDLREGLRYLRRSPLLRLLLLALAL--------FALLGGALTVLLPLL--------AKEVLGGGAA 244
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1293418642 292 QAAMMTGLFQLGGPLGGILVGMLMDRASAKAVIAATYFLGCLCLLSQGL--MDFGSAALSVLIFISGMCINGAQNG-LQA 368
Cdd:cd06173   245 GYGLLLAAFGVGALLGALLLGRLSKRRRRGRLLLIGALLLGLALLVLGLspSLWLLLAALFLLGLAGGLFNVPLNTlLQL 324
                         330       340       350       360       370       380
                  ....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1293418642 369 YSPAYYQTEIRATGVSWMHGIGRTGAILSSTLGGMLmlavpGHSSIFLVLGLPACLAGICILL 431
Cdd:cd06173   325 RVPDELRGRVFSVYNALNSGAMPLGALLAGLLADAL-----GLSAVFLLAGALLLLAALLLLL 382
PRK10091 PRK10091
MFS transport protein AraJ; Provisional
42-200 7.99e-08

MFS transport protein AraJ; Provisional


Pssm-ID: 182234 [Multi-domain]  Cd Length: 382  Bit Score: 53.94  E-value: 7.99e-08
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1293418642  42 VMGfVAPALIEDWGISRAEMGPILGAAMFGVAIGALVAGPLSDRYGRKRILLWSVALFALFSLAGAVAQSPSQLALMRFL 121
Cdd:PRK10091   22 IMG-VLTELAHDVGISIPAAGHMISYYALGVVVGAPIIALFSSRYSLKHILLFLVALCVIGNAMFTLSSSYLMLAIGRLV 100
                          90       100       110       120       130       140       150
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1293418642 122 TGLGLGAVMPNCVTLVAEYMPERRKGVMITLMYSGFNVGSGLGGFIAAGLLSHYSWHSALIFGGVLPLVVLPFMIVMLP 200
Cdd:PRK10091  101 SGFPHGAFFGVGAIVLSKIIKPGKVTAAVAGMVSGMTVANLLGIPLGTYLSQEFSWRYTFLLIAVFNIAVLASIYFWVP 179
PRK11043 PRK11043
Bcr/CflA family multidrug efflux MFS transporter;
71-203 1.03e-07

Bcr/CflA family multidrug efflux MFS transporter;


Pssm-ID: 182924 [Multi-domain]  Cd Length: 401  Bit Score: 53.74  E-value: 1.03e-07
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1293418642  71 GVAIGALVAGPLSDRYGRKRILLWSVALFALFSLAGAVAQSPSQLALMRFLTGLGLGAVMPNCVTLVAEYMPERR-KGVM 149
Cdd:PRK11043   53 GFALGQLLWGPLSDRYGRKPVLLAGLSLFALGSLGMLWVESAAQLLVLRFVQAVGVCSAAVIWQALVIDRYPAQKaNRVF 132
                          90       100       110       120       130
                  ....*....|....*....|....*....|....*....|....*....|....*..
gi 1293418642 150 ITLMYSgfnVG--SGLGGFIAAGLLSHYSWHSalIFGGVLPL-VVLPFMIVMLPESA 203
Cdd:PRK11043  133 ATIMPL---VAlsPALAPLLGAWLLNHFGWQA--IFATLFAItLLLILPTLRLKPSK 184
MelB COG2211
Na+/melibiose symporter or related transporter [Carbohydrate transport and metabolism];
23-448 1.29e-07

Na+/melibiose symporter or related transporter [Carbohydrate transport and metabolism];


Pssm-ID: 441813 [Multi-domain]  Cd Length: 447  Bit Score: 53.75  E-value: 1.29e-07
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1293418642  23 WNVLLLCFIIIMLDGYDAAVMGFVAPALIEDWGISRAEMGPILGAAMFGVAIGALVAGPLSDRYG-----RKRILLWSVA 97
Cdd:COG2211    10 KEKLAYGLGDLGLNLAFGLLSAYLLYFYTDVLGLSAALVGLILLVARLWDAITDPLIGALSDRTRtrwgrRRPWILIGAI 89
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1293418642  98 LFALFSLAGAVAQSPSQ------LALMRFLTGLGLGAVMPNCVTLVAEYMPERR-KGVMITLMYSGFNVGSGLGGFIAAG 170
Cdd:COG2211    90 PLALSFVLLFTAPDLSPtgkliyALVTYLLLGLAYTLVNIPYSALGAELTPDYEeRTRLSSWRFAFAGLGGLLASVLPPP 169
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1293418642 171 LLSHYSWHSALIFGGVLPLVVLPFMIVMLpesamnmvarrlpgeqiaralnrLGGQFTAETVFQLNAPPITRSSkVAQLF 250
Cdd:COG2211   170 LVAAFGGDAALGYRLTALIFAVLGLLAFL-----------------------LTFFGTKERPVPEEEKVSLKES-LKALL 225
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1293418642 251 RHGYARgtiALWLTYFMGLFVIYLLNGWLPTILRSG-GLSLQQAAMMTGLFQLGGPLGGILVGMLMDRASAKAVIAATYF 329
Cdd:COG2211   226 KNRPFL---LLLLAYLLFFLALALVAALLLYYFKYVlGLSAALVGLLLALYFLAALLGAPLWPRLAKRFGKKKAFIIGLL 302
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1293418642 330 LGCLCLLSQGLMDFGS----AALSVLIFISGMCINGAQNGLQAYSPAY--YQTEIRATGV--SWMHGIGRTGAILSSTLG 401
Cdd:COG2211   303 LAALGLLLLFFLGPGNlwllLVLAALAGIGLGAILVLPWAMLADVVDYdeWKTGRRREGLyfGIFTFAIKLGQALAGALA 382
                         410       420       430       440       450       460
                  ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1293418642 402 GMLMLAVPGHSS--------------IFLVLGLPACLAGICILLHRMNHAKPRLTEAELNA 448
Cdd:COG2211   383 GLLLALFGYVAGaaqspsaltgirllFFLLPAVLLLLAALLLLFYPLTRERHAEIRAELAA 443
PTR2 COG3104
Dipeptide/tripeptide permease [Amino acid transport and metabolism];
45-187 1.53e-07

Dipeptide/tripeptide permease [Amino acid transport and metabolism];


Pssm-ID: 442338 [Multi-domain]  Cd Length: 479  Bit Score: 53.66  E-value: 1.53e-07
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1293418642  45 FVAPALIEDWGISRAEMGPILGAAMFGVAIGALVAGPLSDRY-GRKRILLWSVALFALFSLAGAVAQSPSQLALMRFLTG 123
Cdd:COG3104    41 LTASLADGGLGLSEADAAAIYGAYTALVYLTPLLGGWLADRLlGQRRAILLGGILMALGHFLLALPGGVTLFYLGLALIA 120
                          90       100       110       120       130       140
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1293418642 124 LGLGAVMPNCVTLVAE-YMPE--RRKGVMiTLMYSGFNVGSGLGGFIAAGLLSHYSWHSALIFGGVL 187
Cdd:COG3104   121 VGNGLFKPNISSLVGQlYDPGdpRRDAGF-TIFYMGINIGAFLAPLLCGYLGEKYGWHYGFGAAAIG 186
MFS_FEN2_like cd17327
Pantothenate transporter FEN2 and similar transporters of the Major Facilitator Superfamily; ...
23-326 1.90e-07

Pantothenate transporter FEN2 and similar transporters of the Major Facilitator Superfamily; This family is composed of Saccharomyces cerevisiae pantothenate transporter FEN2 (or fenpropimorph resistance protein 2) and similar proteins from fungi and bacteria including fungal vitamin H transporter, allantoate permease, and high-affinity nicotinic acid transporter, as well as Pseudomonas putida phthalate transporter and nicotinate degradation protein T (nicT). These proteins are involved in the uptake into the cell of specific substrates such as pathothenate, biotin, allantoate, and nicotinic acid, among others. The FEN2-like family belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340885 [Multi-domain]  Cd Length: 406  Bit Score: 53.02  E-value: 1.90e-07
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1293418642  23 WNVLLLCFIIIMLDGYD------AAVMGfvapaLIEDWGISRAEMGPILGAAMFGVAIGALVAGPLSDRYGRKRILLWSV 96
Cdd:cd17327     4 LFILPLLCILYFLQYLDksnisnAAVMG-----MKEDLKLVGNQYNWGNTVFYVGYIIFELPGNLLLQRFPPSKWLSVFI 78
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1293418642  97 ALFALFSLAGAVAQSPSQLALMRFLTGLGLGAVMPNCVTLVAEYMPERRKGVMITLMYSGFNVGSGLGGFIAAGLLSH-- 174
Cdd:cd17327    79 VLWGLLTLLTAAVKNFGGLIALRFFLGLFESGVFPGFILYLGMWYKREEQAKRIAFFYAAAGLGSIFGGLLAYGVFKIlg 158
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1293418642 175 ----YSWHSALIFGGVLPLVVLPFMIVMLPESAMNmvARRLPGEQIARALNRLggqftaetvfqlnapPITRSSKVAQLF 250
Cdd:cd17327   159 vgglAGWRWLFIIEGLITIIIGLVIFFWLPDNPSK--AWFLTEEEKELAVERL---------------RANQTGKGDQKF 221
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1293418642 251 RHGYARGTIALWLTYFMGLFVI------YLLNGWLPTILRSGGLSLQQAAMMTGLFQLGGPLGGILVGMLMDRASAKAVI 324
Cdd:cd17327   222 KWKQIKEAFKDPRTWLLFLFFFcsqitnNGISNFLPLILKSLGFYSLQTNLLSVPIGALGAVSLLIAALLSDRFKKRGLF 301

                  ..
gi 1293418642 325 AA 326
Cdd:cd17327   302 AI 303
MFS_ShiA_like cd17369
Shikimate transporter and similar proteins of the Major Facilitator Superfamily; This ...
55-192 2.87e-07

Shikimate transporter and similar proteins of the Major Facilitator Superfamily; This subfamily is composed of Escherichia coli shikimate transporter (ShiA), inner membrane metabolite transport protein YhjE, and other putative metabolite transporters. ShiA is involved in the uptake of shikimate, an aromatic compound involved in siderophore biosynthesis. It has been suggested that YhjE may mediate the uptake of osmoprotectants. The ShiA-like subfamily belongs to the Metazoan Synaptic Vesicle Glycoprotein 2 (SV2) and related small molecule transporter family (SV2-like) of the Major Facilitator Superfamily (MFS) of membrane transport proteins. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340927 [Multi-domain]  Cd Length: 408  Bit Score: 52.53  E-value: 2.87e-07
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1293418642  55 GISRAEMgpiLGAAMFGVAIGAL---VAGPLSDRYGRKRILLWSVALFALFSLA--GAVAQSPSQLALMRFLTGLGLGAV 129
Cdd:cd17369   260 GVDRSTV---LLAVLIASVVAAItipLFGWLSDRVGRRPVYLAGALLAALFAFPffWLLDTGSTWLIVLAAVVVLGVLHG 336
                          90       100       110       120       130       140       150
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1293418642 130 MPNCV--TLVAEYMPERrkgVMITLMYSGFNVGSGLGG----FIAAGLL-SHYSWHSALIFGGVLPLVVL 192
Cdd:cd17369   337 MMYGPqaAFLAELFPTR---VRYTGASLGYQLGAILGGgfapLIATALVaATGSWWPVALYLAALAVISL 403
MFS_YcaD_like cd17477
YcaD and similar transporters of the Major Facilitator Superfamily; This family is composed of ...
55-195 3.55e-07

YcaD and similar transporters of the Major Facilitator Superfamily; This family is composed of Escherichia coli MFS-type transporter YcaD, Bacillus subtilis MFS-type transporter YfkF, and similar proteins. They are uncharacterized transporters belonging to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 341030 [Multi-domain]  Cd Length: 360  Bit Score: 52.18  E-value: 3.55e-07
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1293418642  55 GISRAEMGPILGAAMFGVAIGALVAGPLSDRYGRKRILLWSVALFALFSLA-GAVAQSPSQLALMRFLTGLGLGAVMPNC 133
Cdd:cd17477   219 GLSVAQAALLLAAFVLGGLLLQWPLGWLADRFDRRRVLLGCALLGALAALLlPLVPGLPLALLVLLFLWGGAAGPLYTLA 298
                          90       100       110       120       130       140
                  ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1293418642 134 VTLVAEYMPERRKGVMITLMYSGFNVGSGLGGFIAAGLLSHYSWHSALIFGGVLPLVVLPFM 195
Cdd:cd17477   299 LALAGDRLPGDELVAANAALLLLYGLGSVIGPLLAGALMDAFGPHGLFLFLAAVALLFLLFL 360
MFS_SLC46_TetA_like cd17330
Eukaryotic Solute carrier 46 (SLC46) family, Bacterial Tetracycline resistance proteins, and ...
62-200 4.45e-07

Eukaryotic Solute carrier 46 (SLC46) family, Bacterial Tetracycline resistance proteins, and similar proteins of the Major Facilitator Superfamily of transporters; This family is composed of the eukaryotic proteins MFSD9, MFSD10, MFSD14, and SLC46 family proteins, as well as bacterial multidrug resistance (MDR) transporters such as tetracycline resistance protein TetA and multidrug resistance protein MdtG. MDR transporters are drug/H+ antiporters (DHA) that mediate the efflux of a variety of drugs and toxic compounds, and confer resistance to these compounds. TetA proteins confer resistance to tetracycline while MdtG confers resistance to fosfomycin and deoxycholate. The Solute carrier 46 (SLC46) family is composed of three vertebrate members (SLC46A1, SLC46A2, and SLC46A3), the best-studied of which is SLC46A1, which functions both as an intestinal proton-coupled high-affinity folate transporter involved in the absorption of folates and as an intestinal heme transporter which mediates heme uptake. MFSD10 facilitates the uptake of organic anions such as some non-steroidal anti-inflammatory drugs (NSAIDs) and confers resistance to such NSAIDs. The SLC46/TetA-like family belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340888 [Multi-domain]  Cd Length: 349  Bit Score: 51.81  E-value: 4.45e-07
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1293418642  62 GPILGAAMFGVAIGALVAGPLSDRYGRKRILLWSVALFALFSLAGAVAQSPSQLALMRFLTGLGLGAVmPNCVTLVAEYM 141
Cdd:cd17330    37 GLLQSSYSLGQFLASPLWGRLSDRYGRKPVLLLSLAGSAVSYVLLGLSRNLWLLFLARFLDGLTGGNV-SVAQAYIADIT 115
                          90       100       110       120       130
                  ....*....|....*....|....*....|....*....|....*....|....*....
gi 1293418642 142 PERRKGVMITLMYSGFNVGSGLGGFIAAGLLSHYSWHSALIFGGVLPLVVLPFMIVMLP 200
Cdd:cd17330   116 DEEERAKAFGIISAAFGLGFILGPALGGFLSTPYGYALPFLVAAALALLNLVLVLFFLP 174
PRK10473 PRK10473
MdtL family multidrug efflux MFS transporter;
26-202 4.55e-07

MdtL family multidrug efflux MFS transporter;


Pssm-ID: 182486 [Multi-domain]  Cd Length: 392  Bit Score: 51.95  E-value: 4.55e-07
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1293418642  26 LLLCFIIIMLdgYDAAV-MGFVA-PALIEDWGISRAEMGPILGAAMFGVAIGALVAGPLSDRYGRKRILLWSVALFALFS 103
Cdd:PRK10473    5 LLCSFALVLL--YPAGIdMYLVGlPRIAADLNASEAQLHIAFSVYLAGMAAAMLFAGKIADRSGRKPVAIPGAALFIIAS 82
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1293418642 104 LAGAVAQSPSQLALMRFLTGLGLGAVMPNCVTLVAEYMPERRKGVMITLMYSGFNVGSGLGGFIAAGLLSHYSWHSALIF 183
Cdd:PRK10473   83 LLCSLAETSSLFLAGRFLQGIGAGCCYVVAFAILRDTLDDRRRAKVLSLLNGITCIIPVLAPVLGHLIMLKFPWQSLFYT 162
                         170
                  ....*....|....*....
gi 1293418642 184 GGVLPLVVLPFMIVMLPES 202
Cdd:PRK10473  163 MAAMGILVLLLSLFILKET 181
MFS_Set cd17471
Sugar efflux transporter (Set) family of the Major Facilitator Superfamily of transporters; ...
69-196 4.92e-07

Sugar efflux transporter (Set) family of the Major Facilitator Superfamily of transporters; This family is composed of sugar transporters such as Escherichia coli Sugar efflux transporter SetA, SetB, SetC and other sugar transporters. SetA, SetB, and SetC are involved in the efflux of sugars such as lactose, glucose, IPTG, and substituted glucosides or galactosides. They may be involved in the detoxification of non-metabolizable sugar analogs. The Set family belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 341024 [Multi-domain]  Cd Length: 371  Bit Score: 51.78  E-value: 4.92e-07
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1293418642  69 MFGVAIG-----ALVAGPLSDRYGRKRILLWSVALFALFSLAGAVAQSPSQLALMRFLTGLGLGAVMPNCVTLVAEYMPE 143
Cdd:cd17471   240 LFGLAAAleipiMLLAGLLAKRFGKRRLLLAGFLAGVLFYLGLALATSLWQLIALQLLNAIFIGITAGLGISYFQDLMPG 319
                          90       100       110       120       130
                  ....*....|....*....|....*....|....*....|....*....|...
gi 1293418642 144 RRkGVMITLMYSGFNVGSGLGGFIAAGLLSHYSWHSALIFGGVLPLVVLPFMI 196
Cdd:cd17471   320 QP-GLATTLYSNASRIGSLLGGLLAGVIAQYFGYRAVFLVCAVLALLALVLLL 371
MFS_TRI12_like cd06179
Fungal trichothecene efflux pump (TRI12) of the Major Facilitator Superfamily of transporters; ...
44-177 5.51e-07

Fungal trichothecene efflux pump (TRI12) of the Major Facilitator Superfamily of transporters; This family includes Fusarium sporotrichioides trichothecene efflux pump (TRI12), which may play a role in F. sporotrichioides self-protection against trichothecenes. TRI12 belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340868 [Multi-domain]  Cd Length: 518  Bit Score: 51.86  E-value: 5.51e-07
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1293418642  44 GFVAPALIEDWGiSRAEMGPILGAAMFGVAIGALVAGPLSDRYGRKRILLWSVALFALFSLAGAVAQSPSQLALMRFLTG 123
Cdd:cd06179    18 AAVLPFIVADLG-PSSNSTWISTAWSLAQAVLGPIVGRLSDLFGRRWFFIGGNLLGVVGSIVAGTAKSVNMLIGGQALIG 96
                          90       100       110       120       130
                  ....*....|....*....|....*....|....*....|....*....|....*.
gi 1293418642 124 LGLGAVmPNCVTLVAEYMPERRKGVMITLMYSGFNVGSGLGGFIAAGLL--SHYSW 177
Cdd:cd06179    97 IGAGTQ-GLGAAVASELVPNKYRGLVQGVVNLVASPGSALGPLIAGALVeaNAAGW 151
MFS_MJ1317_like cd17370
MJ1317 and similar transporters of the Major Facilitator Superfamily; This family is composed ...
48-404 6.61e-07

MJ1317 and similar transporters of the Major Facilitator Superfamily; This family is composed of Methanocaldococcus jannaschii MFS-type transporter MJ1317, Mycobacterium bovis protein Mb2288, and similar proteins. They are uncharacterized transporters belonging to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340928 [Multi-domain]  Cd Length: 371  Bit Score: 51.39  E-value: 6.61e-07
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1293418642  48 PALIEDWGISRAEMGPILGAAMFGVAIGALVAGPLSDRYG-RKRILLWSVALFALFSLAGAVAQSPSQLALMRFLTGLGL 126
Cdd:cd17370    23 PLFLVVLGASAAAVGLIEGLAEALGSLLRLFSGYLSDRTGkRKPLVILGYGLSALAKPLLALAGSWQLVLLLRILERLGK 102
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1293418642 127 GAVMPNCVTLVAEYMPERRKGVMITLMYSGFNVGSGLGGFIAAGLLSHYSWHSALIFG-GVLPLVVLPFMIvmlpesamn 205
Cdd:cd17370   103 GIRTPPRDALLADATPPSGRGKAFGLHRALDTLGAVLGPLLAALLLYLLGGNYRTIFLlAAIPALLALLIL--------- 173
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1293418642 206 MVARRLpgeqiaralnrlggqftaetvfqlnaPPITRSSKVAQLFRHGYARGTIALWLTYFMGLFVIYLLNGWLPtILRS 285
Cdd:cd17370   174 LFVVKE--------------------------YPRPPKLRKKSKKTSLKKLPKAFWLYLLAVALFALGNFSFAFL-ILRA 226
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1293418642 286 G--GLSLQQAAMMTGLFQLGGPLGGILVGMLMDRASAKAVIAATYFLGCLCLLsqGLMDFGSAALSVLIFISGMCINGAQ 363
Cdd:cd17370   227 QelGLSAALIPLLYALFNLVYALAAYPAGRLSDRIGRKKLLILGYLSLALAYL--GFALGSSLWLLLLGFILWGLYMGAQ 304
                         330       340       350       360
                  ....*....|....*....|....*....|....*....|..
gi 1293418642 364 NGLQ-AYSPAYYQTEIRATGVSWMHGIGRTGAILSSTLGGML 404
Cdd:cd17370   305 ESIErAAVADLVPAELRGTAYGLFNTVVGIGWLLASLIAGYL 346
FucP COG0738
Fucose permease [Carbohydrate transport and metabolism];
254-440 8.00e-07

Fucose permease [Carbohydrate transport and metabolism];


Pssm-ID: 440501 [Multi-domain]  Cd Length: 391  Bit Score: 51.01  E-value: 8.00e-07
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1293418642 254 YARGTIALWLTYFMGLFVIYLLNGWLPTILRSGGLSLQQAAMMTGLFQLGGPLGGILVGMLMDRASAKAVIAATYFLGCL 333
Cdd:COG0738     6 YRRALIAIYLLFFLWGFATALWGPLIPALKDAFGLSDAQAGLLLFAFFLGYLLASLPAGRLIDRFGYKRGLLLGLLLMAL 85
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1293418642 334 CLLSQGLMDfGSAALSVLIFISGMCINGAQNGLQAYSPAYYQtEIRATGVSWMHGIGRTGAILSSTLGGMLMLAVPGHS- 412
Cdd:COG0738    86 GLLLFALAP-SYPLLLLALFLLGLGLGLLDVAANPYVAALGP-ETAASRLNLLHAFFSLGALLGPLLGGLLILLGLSLSw 163
                         170       180
                  ....*....|....*....|....*....
gi 1293418642 413 -SIFLVLGLPACLAGICILLHRMNHAKPR 440
Cdd:COG0738   164 hLPYLILAVLLLLLALLFLRSKLPEIEEE 192
PRK14995 PRK14995
SmvA family efflux MFS transporter;
22-204 8.81e-07

SmvA family efflux MFS transporter;


Pssm-ID: 184957 [Multi-domain]  Cd Length: 495  Bit Score: 51.27  E-value: 8.81e-07
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1293418642  22 QWNVLLLCFIIIMLDGYDAAVMGFVAPALIEDWGISRAEMGPILGAAMFGVAIGALVAGPLSDRYGRKRILLWSVALFAL 101
Cdd:PRK14995    4 QWLTLVIIVLVYIPVAIDATVLHVAAPTLSMTLGASGNELLWIIDIYSLVMAGMVLPMGALGDRIGFKRLLMLGGTLFGL 83
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1293418642 102 FSLAGAVAqsPSQLALMRFLTGLGLGAVMPNCVTLV---AEYMPERRKGVMITLMYSGFNVGSGLGGFIAAGLLSHYSWH 178
Cdd:PRK14995   84 ASLAAAFS--PTASWLIATRALLAIGAAMIVPATLAgirATFTEEKQRNMALGVWAAVGSGGAAFGPLVGGILLEHFYWG 161
                         170       180
                  ....*....|....*....|....*.
gi 1293418642 179 SALIFGGVLPLVVLPFMIVMLPESAM 204
Cdd:PRK14995  162 SVFLINVPIVLVVMGLTARYVPRQAG 187
MFS_MMR_MDR_like cd17504
Methylenomycin A resistance protein (also called MMR peptide)-like multidrug resistance (MDR) ...
17-186 9.11e-07

Methylenomycin A resistance protein (also called MMR peptide)-like multidrug resistance (MDR) transporters of the Major Facilitator Superfamily; This subfamily is composed of putative multidrug resistance (MDR) transporters including Chlamydia trachomatis antiseptic resistance protein QacA_2, and Serratia sp. DD3 Bmr3. MDR transporters are drug/H+ antiporters (DHA) that mediate the efflux of a variety of drugs and toxic compounds, and confer resistance to these compounds. This subfamily belongs to the Methylenomycin A resistance protein (also called MMR peptide) and similar multidrug resistance (MDR) transporters (MMR-like MDR transporter) family of the Major Facilitator Superfamily (MFS) of transporters. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 341047 [Multi-domain]  Cd Length: 371  Bit Score: 50.65  E-value: 9.11e-07
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1293418642  17 PVSRFQWNVLLLCFIIIMLDGYDAAVMGFVAPALIED-----WGISRAEMGPILGAAMFGVAIGALVAGPLSDRYGRKRI 91
Cdd:cd17504   170 DLRLLRRRNVLLANITALLAGFGMFMVFQLLPQLLQLptptgFGLGITEAGLLLLPGALVMLIAGPLAGRLIARVGPRRV 249
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1293418642  92 LLWSVALFALFSLAGAV-AQSPSQLALMRFLTGLGLGAVMPNCVTLVAEYMPERRKGVMITLMYSGFNVGSGLGGFIAAG 170
Cdd:cd17504   250 LLIGLVISAVGLLLLALlHSSLWALVVALLLIGIGLGLAFASLPNIVVESVPPDRTGIATGMNTVLRTIGSAIGPAIAGA 329
                         170
                  ....*....|....*.
gi 1293418642 171 LLShySWHSALIFGGV 186
Cdd:cd17504   330 ILT--TYTVSITSGGV 343
MFS_TetA cd17388
Tetracycline resistance protein TetA and related proteins of the Major Facilitator Superfamily ...
26-431 9.32e-07

Tetracycline resistance protein TetA and related proteins of the Major Facilitator Superfamily of transporters; This subfamily is composed of tetracycline resistance proteins similar to Escherichia coli TetA(A), TetA(B), and TetA(E), which are metal-tetracycline/H(+) antiporters that confer resistance to tetracycline by an active tetracycline efflux, which is an energy-dependent process that decreases the accumulation of the antibiotic in cells. TetA-like tetracycline resistance proteins belongs to the Eukaryotic Solute carrier 46 (SLC46)/Bacterial Tetracycline resistance (TetA) -like (SLC46/TetA-like) family of the Major Facilitator Superfamily (MFS) of transporters. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340946 [Multi-domain]  Cd Length: 385  Bit Score: 50.71  E-value: 9.32e-07
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1293418642  26 LLLCFIIIMLDGYDAAVMGFVAPALIEDWGISRAEMGPILGAAMFGVA----IGALVAGPLSDRYGRKRILLWSVALFAL 101
Cdd:cd17388     1 LIFILVTVLLDAMGIGLIMPVLPTLLREFVGDSADAATHYGVLLALYAlmqfIFAPILGALSDRFGRRPVLLLSLAGAAL 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1293418642 102 FSLAGAVAQSPSQLALMRFLTGLgLGAVMPNCVTLVAEYMPERRKGVMITLMYSGFNVGSGLGGFIaAGLLSHYSWHSAL 181
Cdd:cd17388    81 DYLLMAFAPTLWWLYLGRIIAGI-TGATGAVAAAYIADVTPPEQRARNFGLLGAAFGLGFIAGPAL-GGLLGEISPRAPF 158
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1293418642 182 IFGGVLPLVVLPFMIVMLPESamnmvarrLPGEQIARALNRLGGQFTAeTVFQLNAPPITRSSKVAQLFRHGyARGTIAL 261
Cdd:cd17388   159 LVAAGLNGLNFLLGLFVLPES--------LPPERRRAFRWRRANPFGS-LRWLTGFPGLLGLLAVFFLIQLI-GQVPATT 228
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1293418642 262 WLTYFMGLFviyllnGWLPTILrsgGLSLQQAAMMTGLFQlggplgGILVGMLMDRASAKAVIAATYFLGCLCLLSQGLM 341
Cdd:cd17388   229 WVLFTEDRF------DWSPTMV---GLSLAVFGLLHALFQ------AFVTGPIAKRLGEKRAILLGLAADALGFLLLAFA 293
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1293418642 342 DFGSAALSVLIFI--SGMCINGAQNGLQAYSPAYYQTEIRATGVSWMHgigrtgaiLSSTLGGMLMLAVPGHSSiFLVLG 419
Cdd:cd17388   294 TQGWMVFPILILLalGGIAGPALQGLLSRQVPENEQGELQGVLTSLTS--------LTSIIGPLLFTGIFAASP-ATWPG 364
                         410
                  ....*....|....*.
gi 1293418642 420 LP----ACLAGICILL 431
Cdd:cd17388   365 LAwiigAALYLICLVL 380
MFS_OFA_like cd17353
Oxalate:formate antiporter (OFA) and similar proteins of the Major Facilitator Superfamily of ...
7-190 1.81e-06

Oxalate:formate antiporter (OFA) and similar proteins of the Major Facilitator Superfamily of transporters; This subfamily is composed of Oxalobacter formigenes oxalate:formate antiporter (OFA or OxlT) and similar proteins. O. formigenes, a commensal found in the gut of animals and humans, plays an important role in clearing dietary oxalate from the intestinal tract, which is carried out by OFA/OxlT, an anion transporter that facilitates the exchange of divalent oxalate with monovalent formate, the product of oxalate decarboxylation. This exchange generates an electrochemical proton gradient and is the source of energy for ATP synthesis in this cell. The OFA-like subfamily belongs to the Monocarboxylate transporter -like (MCT-like) family of the Major Facilitator Superfamily (MFS) of membrane transport proteins. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340911 [Multi-domain]  Cd Length: 389  Bit Score: 49.92  E-value: 1.81e-06
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1293418642   7 VDVKAWIDARPVSRFQWNVLLLC--FIIIMLDGYDAAVMGFVAPALIEDWGISRAEMGPILGAAMFGV-----AIGALVA 79
Cdd:cd17353   190 VDPLANNAENSPRDYTPREMLRTptFWLLWLMFFLNATAGLMLIGQAKPIGQEFAGLDAGIAALAVSIlsifnGGGRPFW 269
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1293418642  80 GPLSDRYGRKR--ILLWSVALFALFSLAgAVAQSPSQLALMRFLTGLGLGAVMPNCVTLVAEYMPERRKGVMITLMYSGF 157
Cdd:cd17353   270 GWLSDKIGRKNtlSIAFLIQGVAMFLLP-FIGSVAVLFVLGVALIGFCYGGGFALFPALTADFFGTKNAGTNYGLLYTAK 348
                         170       180       190
                  ....*....|....*....|....*....|...
gi 1293418642 158 NVGSGLGGFIAAGLLSHYSWHSALIFGGVLPLV 190
Cdd:cd17353   349 GVGGLIGPIIAAYVLYTGGYNAAFIIAAALSLV 381
MFS_SLC22A18 cd17331
Solute carrier family 22 member 18 of the Major Facilitator Superfamily of transporters; ...
24-197 2.00e-06

Solute carrier family 22 member 18 of the Major Facilitator Superfamily of transporters; Solute carrier family 22 member 18 (SLC22A18) is also called Beckwith-Wiedemann syndrome chromosomal region 1 candidate gene A protein (BWR1A or BWSCR1A), efflux transporter-like protein, imprinted multi-membrane-spanning polyspecific transporter-related protein 1 (IMPT1), organic cation transporter-like protein 2 (ORCTL2), or tumor-suppressing subchromosomal transferable fragment candidate gene 5 protein (TSSC5). It is localized at the apical membrane surface of renal proximal tubules and may act as an organic cation/proton antiporter. It functions as a tumor suppressor in several cancer types including glioblastoma and colorectal cancer. SLC22A18 belongs to the Eukaryotic Solute carrier 46 (SLC46)/Bacterial Tetracycline resistance (TetA) -like (SLC46/TetA-like) family of the Major Facilitator Superfamily (MFS) of transporters. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340889 [Multi-domain]  Cd Length: 382  Bit Score: 49.91  E-value: 2.00e-06
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1293418642  24 NVLLLCFIIIMLDGYDAAVMGFVAPALIEDWGISRAEMGPILG-AAMFGVAIGALVAGPLSDRYGRKRILLWSVALFALF 102
Cdd:cd17331   208 GVAFLLLVKLLSGLPIGMFQSMFSLVAMDFFGLTPEENGYLMSyAGVLGMVVQGLLVGPLTKRFGERSLLKLSVALLAIG 287
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1293418642 103 SLAGAVAQSPSQLALMRFLTGLGlGAVMPNCVT-LVAEYMPERRKGVMITLMYSGFNVGSGLGGFIAAGLLSHYSWHSAL 181
Cdd:cd17331   288 YLLLAFVTTVWQLLVLLLPLVIG-GSVLYTVITsLLTKAVPPEDTGTALGLSHALFSLVRTVSPTIGGALLQAYGFPSFG 366
                         170
                  ....*....|....*.
gi 1293418642 182 IFGGVLPLVVLPFMIV 197
Cdd:cd17331   367 LLGAAINGLLTVYLLL 382
MFS_GLUT10_Class3 cd17436
Glucose transporter type 10 (GLUT10), a Class 3 GLUT, of the Major Facilitator Superfamily of ...
37-209 2.24e-06

Glucose transporter type 10 (GLUT10), a Class 3 GLUT, of the Major Facilitator Superfamily of transporters; Glucose transporter type 10 (GLUT10) is also called Solute carrier family 2, facilitated glucose transporter member 10 (SLC2A10). It is classified as a Class 3 GLUT and is a facilitative glucose transporter that exhibits a wide tissue distribution. It is expressed in pancreas, placenta, heart, lung, liver, brain, fat, muscle, and kidney. GLUT10 facilitates the transport of dehydroascorbic acid (DHA), the oxidized form of vitamin C, into mitochondria, and also increases cellular uptake of DHA, which in turn protects cells against oxidative stress. Loss-of-function mutations in SLC2A10 cause arterial tortuosity syndrome (ATS), an autosomal recessive connective tissue disorder characterized by twisting and lengthening of the major arteries, hypermobility of the joints, and laxity of skin. The GLUT10 subfamily belongs to the Glucose transporter -like (GLUT-like) family of the Major Facilitator Superfamily (MFS) of membrane transport proteins. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340994 [Multi-domain]  Cd Length: 376  Bit Score: 49.41  E-value: 2.24e-06
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1293418642  37 GYDAAVMGFVAPALIEDWGISRAEMGPILGAAMFGVAIGALVAGPLSDRYGRKRILLWSVALFALFSLAGAVAQSPSQLA 116
Cdd:cd17436    14 GYELGIISGALLQLQTDFSLSCFEQEALVSALLIGALLASLIGGFLIDRHGRRTSILGSNLVLLAGSLILTLAGSFFWLV 93
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1293418642 117 LMRFLTGLGLGAVMPNCVTLVAEYMPERRKGVMITLMYSGFNVGSgLGGFIAAGLLSHYSWHSALIFG-GVLPLVVLPFM 195
Cdd:cd17436    94 IGRAVVGFAISVSSMACCIYVSEMVTPHQRGLLVSLYEAGITVGI-LISYALNYFFSNVLTGWRYMFGlAIIPAAIQFAS 172
                         170
                  ....*....|....
gi 1293418642 196 IVMLPESAMNMVAR 209
Cdd:cd17436   173 ILLLPKKPEVLNIK 186
MFS_ProP cd17366
Proline/betaine transporter of the Major Facilitator Superfamily of transporters; This ...
74-172 4.12e-06

Proline/betaine transporter of the Major Facilitator Superfamily of transporters; This subfamily is composed of Escherichia coli proline/betaine transporter, also called proline porter II (PPII), and similar proteins. ProP is a proton symporter that senses osmotic shifts and responds by importing osmolytes such as proline, glycine betaine, stachydrine, pipecolic acid, ectoine and taurine. It is both an osmosensor and an osmoregulator which is available to participate early in the bacterial osmoregulatory response. The ProP subfamily belongs to the Metazoan Synaptic Vesicle Glycoprotein 2 (SV2) and related small molecule transporter family (SV2-like) of the Major Facilitator Superfamily (MFS) of membrane transport proteins. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340924 [Multi-domain]  Cd Length: 377  Bit Score: 48.89  E-value: 4.12e-06
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1293418642  74 IGALVAGPLSDRYGRKRILLWSVALFALFSLA----------GAVAqsPSQLALMRFLTGLGLGAVMPNCVTLVAEYMPE 143
Cdd:cd17366    55 LGGLVFGPLGDKYGRQKVLAITIILMAASTFCigllptyatiGVWA--PILLLLARMVQGFSTGGEYGGAATFVAEYAPD 132
                          90       100
                  ....*....|....*....|....*....
gi 1293418642 144 RRKGvmitLMYSGFNVGSgLGGFIAAGLL 172
Cdd:cd17366   133 RKRG----FLGSWLEFGT-LAGFILGAGL 156
MFS_YxlH_like cd17490
Bacillus subtilis YxlH and similar transporters of the Major Facilitator Superfamily; This ...
40-199 4.31e-06

Bacillus subtilis YxlH and similar transporters of the Major Facilitator Superfamily; This subfamily is composed of Bacillus subtilis YxlH uncharacterized MFS-type transporter YxlH and similar proteins. The biological function of YxlH remains unclear. The YxlH-like subfamily belongs to the bacterial MdtG-like and eukaryotic solute carrier 18 (SLC18) family of the Major Facilitator Superfamily (MFS) of transporters. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 341043 [Multi-domain]  Cd Length: 371  Bit Score: 48.76  E-value: 4.31e-06
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1293418642  40 AAVMGFVaPALIEDWGISRAEMGPILGAAMFGVAIGALVAGPL-SDRYGRKRILLWSVALFALFSLAGAVAQSPSQLALM 118
Cdd:cd17490   212 STTFGFT-PLIAKQLGASSFQLGLLSIIYLLPNALASLLSGTLfYKKLGERNTIIIGFLLLGAYCFLIPFAPNLTLLYLL 290
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1293418642 119 RFLTGLGLGAVMPNCVTLVAEYMPERRKGVMITLMYSGFNVGSGLGGFIAAGLLSHYSWHSALIFGGVLPLVVLPFMIVM 198
Cdd:cd17490   291 QALNGFGTGILFPLLMSLSIEGVPAEQRSTAMGFFQAIYALGMFLGPVLVGIISEAFGLQTGFFVIGVIALLAAILSLAY 370

                  .
gi 1293418642 199 L 199
Cdd:cd17490   371 Y 371
MFS_SLC22A15 cd17377
Solute carrier family 22 member 15 of the Major Facilitator Superfamily of transporters; ...
71-141 5.05e-06

Solute carrier family 22 member 15 of the Major Facilitator Superfamily of transporters; Solute carrier family 22 member 15 (SLC22A15) is also called fly-like putative transporter 1 (FLIPT1). It is expressed at the highest levels in the kidney and brain. It is a member of the SLC22 family of transporters, which includes organic cation transporters (OCTs), organic zwitterion/cation transporters (OCTNs), and organic anion transporters (OATs). SLC22 transporters interact with a variety of compounds that include drugs of abuse, environmental toxins, opioid analgesics, antidepressant and anxiolytic agents, and neurotransmitters and their metabolites. SLC22A15 belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340935 [Multi-domain]  Cd Length: 353  Bit Score: 48.24  E-value: 5.05e-06
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1293418642  71 GVAIGALVAGPLSDRYGRKRILLWSVALFALFSLAGAVAQSPSQLALMRFLTGLGLGAVMPNCVTLVAEYM 141
Cdd:cd17377    51 GVLIGVVSFGQLSDRFGRKPVYLTGLALDILFAYFNALAPSYEFFAVSRFLVGVMNGGMSLVAFVLLNECV 121
MFS_MucK cd17371
Cis,cis-muconate transport protein and similar proteins of the Major Facilitator Superfamily; ...
55-201 6.60e-06

Cis,cis-muconate transport protein and similar proteins of the Major Facilitator Superfamily; This subfamily is composed of Acinetobacter sp. Cis,cis-muconate transport protein (MucK), Escherichia coli putative sialic acid transporter 1, and similar proteins. MucK functions in the uptake of muconate and allows Acinetobacter calcoaceticus ADP1 (BD413) to grow on exogenous cis,cis-muconate as the sole carbon source. The MucK subfamily belongs to the Metazoan Synaptic Vesicle Glycoprotein 2 (SV2) and related small molecule transporter family (SV2-like) of the Major Facilitator Superfamily (MFS) of membrane transport proteins. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340929 [Multi-domain]  Cd Length: 389  Bit Score: 48.07  E-value: 6.60e-06
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1293418642  55 GISRAEMGPILGAAMFGVAIGALVAGPLSDRYGRKrillWSVALFALFSLAGAVA-----QSPSQLALMRFLTGLGLGAV 129
Cdd:cd17371   241 GLSFEGSAGYLVVTILGGFLGYLAGGFLADRIGRR----NNFALFALGSAISILLyfflpLSPTLILILGFPLGFFASGP 316
                          90       100       110       120       130       140       150
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1293418642 130 MPNCVTLVAEYMPERRKGVMITLMYSGFNVGSGLGGFIAAGLLSHYSWHSALIFGGVLPLVVLPFMIVMLPE 201
Cdd:cd17371   317 FSGMGAYLTELFPTAVRATAQGFCYNVGRIIGALFPFLVGFLATSGSLGTAIAVFAAVYYIAGLVLALLLPE 388
MFS_3 pfam05977
Transmembrane secretion effector; This is a family of transport proteins. Members of this ...
76-367 8.22e-06

Transmembrane secretion effector; This is a family of transport proteins. Members of this family include a protein responsible for the secretion of the ferric chelator, enterobactin, and a protein involved in antibiotic resistance.


Pssm-ID: 399164 [Multi-domain]  Cd Length: 523  Bit Score: 48.21  E-value: 8.22e-06
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1293418642  76 ALVAGPLSDRYGRKRILLWSVALFALFS-----LAGAVAQSPSQLALMRFLTGLGLGAVMPNCVTLVAEYMPERRKGVMI 150
Cdd:pfam05977  62 SIPAGALADNFDRRKIMLAGQLLLALVStlltlLAGLGLLSPWLLLGLTFLGGIGTALMDPAWQASVPELVPRRDLPAAV 141
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1293418642 151 TLMYSGFNVGSGLGGFIAAGLLSHYSwhSALIFGgvlpLVVLPFM--IVMLPESAMNMVARRLPGEQIARALnRLGGQFT 228
Cdd:pfam05977 142 ALNSVGYNIARSVGPALGGVLLAAFG--PAFTFA----LNALSYFavIAALWRWKRAAPASPLPRERIFGAV-RAGLRFT 214
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1293418642 229 AetvfqlnAPPITRSSKVaqlfrhgyaRGTIalwltYFMGLFVIYLLngwLPTILR---SGGLSLQqaAMMTGLFQLGGP 305
Cdd:pfam05977 215 A-------MSRELRSVLV---------RAFA-----FGLSASAVWAL---LPLVARdllDGDAIFY--GILLGAVGVGAI 268
                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1293418642 306 LGGILVGMLMDRASAKAVIAATYFLGCLCLLSQGLMDFGSAALSVLIFiSGMCINGAQNGLQ 367
Cdd:pfam05977 269 LGALSLPRLRERLGSDRLVLLASVVTALVLLSLALAPNLWLAIPVLLL-GGAAWITALTTLN 329
MFS_NIMT_like cd17409
2-nitroimidazole transporter and similar proteins of the Major Facilitator Superfamily of ...
256-355 8.84e-06

2-nitroimidazole transporter and similar proteins of the Major Facilitator Superfamily of transporters; This subfamily is composed of Escherichia coli 2-nitroimidazole transporter (NIMT), also called YeaN, and similar proteins. NIMT confers resistance to 2-nitroimidazole, the antibacterial and antifungal antibiotic, by mediating the active efflux of this compound. The NIMT-like subfamily belongs to the 2-nitroimidazole and cyanate transporters like (NIMT/CynX-like) family of the Major Facilitator Superfamily (MFS) of transporters. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340967 [Multi-domain]  Cd Length: 374  Bit Score: 47.64  E-value: 8.84e-06
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1293418642 256 RGTIALWLTYFMGL--FVIYLLNGWLPTILRSGGLSLQQAAMMTGLFQLGGPLGGILVGMLMDR-------ASAKAVIAA 326
Cdd:cd17409   195 RSPLAWQVTLFLGLnsFIYYVLVGWLPSILTDAGYSAAQAGSLHGLLQLATAVPGLLLIPVLARmkdqrllAVLVSLLGA 274
                          90       100       110
                  ....*....|....*....|....*....|....*..
gi 1293418642 327 TYFLGcLCLLSQ------GLMDFGSAALSV--LIFIS 355
Cdd:cd17409   275 VGLIG-LLLAPSlailwvILFGFGSGAGFIlgLAFIG 310
MFS_HXT cd17356
Fungal Hexose transporter subfamily of the Major Facilitator Superfamily of transporters and ...
55-202 9.17e-06

Fungal Hexose transporter subfamily of the Major Facilitator Superfamily of transporters and similar proteins; The fungal hexose transporter (HXT) subfamily is comprised of functionally redundant proteins that function mainly in the transport of glucose, as well as other sugars such as galactose and fructose. Saccharomyces cerevisiae has 20 genes that encode proteins in this family (HXT1 to HXT17, GAL2, SNF3, and RGT2). Seven of these (HXT1-7) encode functional glucose transporters. Gal2p is a galactose transporter, while Rgt2p and Snf3p act as cell surface glucose receptors that initiate signal transduction in response to glucose, functioning in an induction pathway responsible for glucose uptake. Rgt2p is activated by high levels of glucose and stimulates expression of low affinity glucose transporters such as Hxt1p and Hxt3p, while Snf3p generates a glucose signal in response to low levels of glucose, stimulating the expression of high affinity glucose transporters such as Hxt2p and Hxt4p. Schizosaccharomyces pombe contains eight GHT genes (GHT1-8) belonging to this family. Ght1, Ght2, and Ght5 are high-affinity glucose transporters; Ght3 is a high-affinity gluconate transporter; and Ght6 high-affinity fructose transporter. The substrate specificities for Ght4, Ght7, and Ght8 remain undetermined. The HXT subfamily belongs to the Glucose transporter -like (GLUT-like) family of the Major Facilitator Superfamily (MFS) of membrane transport proteins. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340914 [Multi-domain]  Cd Length: 403  Bit Score: 47.63  E-value: 9.17e-06
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1293418642  55 GISRAEMGPILGAAMFGVAIGALVAGPLSDRYGRKRILLWSVALFalfsLAGAVAQSPS-----QLALMRFLTGLGLGAV 129
Cdd:cd17356    41 YPSSSRQGLIVSIVNLGSFFGALISSFLSDRIGRKKSIQIGCVIY----IIGAIIQVAAigkwyQLIVGRIIAGLGVGFA 116
                          90       100       110       120       130       140       150
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1293418642 130 MPNCVTLVAEYMPERRKGVMItlmySGFNVGSGLGGFIAAGL---LSHYSWHSA---LIFGGVLPLVVLPFMIVMLPES 202
Cdd:cd17356   117 SVLVPVYQSEVAPKHIRGTLV----SLYQLAITIGILVAYCInygTHKLDGSAQwriPLGLQIVWGLLLLIGMFFLPES 191
MFS_MCT_SLC16 cd17352
Monocarboxylate transporter (MCT) family of the Major Facilitator Superfamily of transporters; ...
23-198 9.33e-06

Monocarboxylate transporter (MCT) family of the Major Facilitator Superfamily of transporters; The animal Monocarboxylate transporter (MCT) family is also called Solute carrier family 16 (SLC16 or SLC16A). It is composed of 14 members, MCT1-14. MCTs play an integral role in cellular metabolism via lactate transport and have been implicated in metabolic synergy in tumors. MCT1-4 are proton-coupled transporters that facilitate the transport across the plasma membrane of monocarboxylates such as lactate, pyruvate, branched-chain oxo acids derived from leucine, valine and isoleucine, and ketone bodies such as acetoacetate, beta-hydroxybutyrate and acetate. MCT8 and MCT10 are transporters which stimulate the cellular uptake of thyroid hormones such as thyroxine (T4), triiodothyronine (T3), reverse triiodothyronine (rT3) and diidothyronine (T2). MCT10 also functions as a sodium-independent transporter that mediates the uptake or efflux of aromatic acids. Many members are orphan transporters whose substrates are yet to be determined. The MCT family belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340910 [Multi-domain]  Cd Length: 361  Bit Score: 47.55  E-value: 9.33e-06
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1293418642  23 WNVLLLCFIIIML-DGYDAAVmGFVAPALIEDWGISRAEMGPILGAAMFGVAIGALVAGPLSDRYGRKRILLWSVALFAL 101
Cdd:cd17352     2 WVVVFASFLVNFFtDGILNSF-GVLFVELLEEFGESTSDIAWIGSLLLGVSLFSGPLSSALVNRFGCRPVAIAGGLLAAL 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1293418642 102 FSLAGAVAQSPSQLAL-MRFLTGLGLGAVMPNCVTLVAEYMPERRKgvmitlMYSGFNV-GSGLGGFIAA----GLLSHY 175
Cdd:cd17352    81 GLLLSSFATSLWQLYLtYGVLGGLGLGLIYSPAIVIVGQYFEKKRG------LATGIAVaGSGVGTFVFPpllrYLLDNY 154
                         170       180
                  ....*....|....*....|...
gi 1293418642 176 SWHSALIFGGVLPLVVLPFMIVM 198
Cdd:cd17352   155 GWRGALLILGGLCLNLCVCGLLL 177
MFS_CitA cd17368
Citrate-proton symporter of the Major Facilitator Superfamily of transporters; Citrate-proton ...
64-155 1.07e-05

Citrate-proton symporter of the Major Facilitator Superfamily of transporters; Citrate-proton symporter, also called citrate carrier protein or citrate transporter or citrate utilization protein A (CitA), is a proton symporter that functions in the uptake of citrate across the boundary membrane. It allows the utilization of citrate as a sole source of carbon and energy. In Klebsiella pneumoniae, the gene encoding this protein is called citH, instead of citA, which is the case for Escherichia coli and other organisms. CitA belongs to the Metazoan Synaptic Vesicle Glycoprotein 2 (SV2) and related small molecule transporter family (SV2-like) of the Major Facilitator Superfamily (MFS) of membrane transport proteins. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340926 [Multi-domain]  Cd Length: 407  Bit Score: 47.37  E-value: 1.07e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1293418642  64 ILGAAMFgvaIGALVAGPLSDRYGRKRILLWS--VALFALFSLAGAVAQSPS------QLALMRFLTGLGLGAVMpncvT 135
Cdd:cd17368   266 LAGVANF---IWAPLGGALSDRIGRRPVLLVItlAALVTLYPVFAWLTAAPSfgrlllVLLVLSFFFGMYGGAMV----V 338
                          90       100
                  ....*....|....*....|
gi 1293418642 136 LVAEYMPERRKGVMITLMYS 155
Cdd:cd17368   339 ALVELFPVRVRSTGFSLVYA 358
MFS_SLC22A17 cd17445
Solute carrier family 22, member 17 of the Major Facilitator Superfamily; Solute carrier ...
69-129 1.09e-05

Solute carrier family 22, member 17 of the Major Facilitator Superfamily; Solute carrier family 22, member 17 (SLC22A17) is also called 24p3 receptor (24p3R), lipocalin-2 receptor, or neutrophil gelatinase-associated lipocalin (NGAL) receptor (NGALR). It functions as a cell surface receptor for lipocalin-2 (LCN2), also called NGAL or 24p3, which plays a key role in iron homeostasis and transport. LCN2 is a secreted protein of the lipocalin family that induces apoptosis in some types of cells and inhibits bacterial growth by sequestration of the iron-laden bacterial siderophore. Over-expressions of NGAL and NGALR have been found to be correlated with unfavorable clinicopathologic features and poor prognosis of patients with hepatocellular carcinoma. SLC22A17 is a member of the SLC22 family of organic cation/anion/zwitterion transporters, which includes organic cation transporters (OCTs/OCTNs) and organic anion transporters (OATs). It belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 341003 [Multi-domain]  Cd Length: 346  Bit Score: 47.46  E-value: 1.09e-05
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1293418642  69 MFGVAIGALVAGPLSDRYGRKRILLWSVALFALFSLAGAVAQSPSQLALMRFLTGLGLGAV 129
Cdd:cd17445    46 ILGFASGYLCLGYTADRLGRRRTLLLSLTLAVPFGVLVAVAASPSLFMAMRFLLGAALAGV 106
MFS_arabinose_efflux_permease_like cd17473
Putative arabinose efflux permease family transporters of the Major Facilitator Superfamily; ...
55-197 1.22e-05

Putative arabinose efflux permease family transporters of the Major Facilitator Superfamily; This family includes a group of putative arabinose efflux permease family transporters, such as alpha proteobacterium quinolone resistance protein NorA (characterized Staphylococcus aureus Quinolone resistance protein NorA belongs to a different group), Desulfovibrio dechloracetivorans bacillibactin exporter, Vibrio aerogenes antiseptic resistance protein. The biological function of those transporters remain unclear. They belong to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 341026 [Multi-domain]  Cd Length: 374  Bit Score: 47.18  E-value: 1.22e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1293418642  55 GISRAEMGPILGAAMFGVAIGALVAGPLSDRYGRKRILLWSVALFALFSLAGAVAQSPSQLALMRFLTGLGLGAVMPNCV 134
Cdd:cd17473   229 GGSAALIGLALAIASLAGAIGALLFGRLKRRLGKRRLLAIGFALMALGFLLLALASGLWVVLLGAILAGLGFGLLLPTLN 308
                          90       100       110       120       130       140
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1293418642 135 TLVAEYMPERRKGVMITLMYSGFNVGSGLGGFIAAGLLSHYSWHSA--LIFGGVLPLVVLPFMIV 197
Cdd:cd17473   309 SWAMSLVPPELRGRAMGIVTSAFFLGQFLSPLVLGPLVNLTGGLSGafLILGVLALVLAIVLLLL 373
2A0108 TIGR00886
nitrite extrusion protein (nitrite facilitator); [Transport and binding proteins, Anions]
21-365 2.43e-05

nitrite extrusion protein (nitrite facilitator); [Transport and binding proteins, Anions]


Pssm-ID: 273322 [Multi-domain]  Cd Length: 354  Bit Score: 46.14  E-value: 2.43e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1293418642  21 FQWNVLLLCFIIIMLdgydaavMGFVAPALI-EDWGISRAEMGPILGAAMFGVAIGALVAGPLSDRYGRKRILLWSVALF 99
Cdd:TIGR00886   5 FSWFGFFLSFLVWFA-------FSPLAVFLIkDDLGLSTAQLGNLVAVPVLAGAVLRIILGFLVDIFGPRYTTALSLLLL 77
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1293418642 100 ALFSLAGAVA-QSPSQLALMRFLTGLGLGAVMPnCVTLVAEYMPERRKGVMITLMYSGFNVGSGLGGFIAAGLLshyswh 178
Cdd:TIGR00886  78 AIPCLWAGLAvQSYSVLLLIRLFIGIAGGSFAS-CMPWISFFFPKKIQGTALGLAAGWGNMGGGVAQFVMPPII------ 150
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1293418642 179 SALIFGGVLP--------LVVLPFMIVMLPESAM-NMVARRLPGEQIARALNRLGgqftaetvfqlnappitrsskVAQL 249
Cdd:TIGR00886 151 GSLIFGGGQPahlawgwaFVIVPAGILLLPALLIfFVGADTPPGKPATGKLSFKE---------------------ALKV 209
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1293418642 250 FRHgyaRGTIALWLTYFMGLFVIYLLNGWLPTILRSG-GLSLQQAAMMTGLFQLGGPLGGILVGMLMDRASAKAVIAATY 328
Cdd:TIGR00886 210 FGN---RHTWILALLYSVTFGSFLGVSSIFAMLFKDQfGLSKVQAGAYASLGGFLGSLARPAGGAISDRLGGARKLLMNF 286
                         330       340       350
                  ....*....|....*....|....*....|....*....
gi 1293418642 329 FLGCLC--LLSQGLMDFGSAALSVLIFISGMCINGAQNG 365
Cdd:TIGR00886 287 LGVAMGafLVVLGLVSDGSLAAFIVLFVALFFFAGAGNG 325
PRK09874 PRK09874
multidrug efflux MFS transporter MdtG;
73-175 3.29e-05

multidrug efflux MFS transporter MdtG;


Pssm-ID: 182127 [Multi-domain]  Cd Length: 408  Bit Score: 46.07  E-value: 3.29e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1293418642  73 AIGALVAGPLSDRYGRKRILLWSVALFALFSLAGAVAQSPSQLALMRFLTGLgLGAVMPNCVTLVAEYMPERRKGVMITL 152
Cdd:PRK09874   68 AIASPFWGGLADRKGRKIMLLRSALGMGIVMVLMGLAQNIWQFLILRALLGL-LGGFVPNANALIATQVPRNKSGWALGT 146
                          90       100
                  ....*....|....*....|....
gi 1293418642 153 MYSGfNVGSGLGGFIAAGLLS-HY 175
Cdd:PRK09874  147 LSTG-GVSGALLGPLAGGLLAdSY 169
MFS_MdtG_MDR_like cd17391
Multidrug resistance protein MdtG and similar multidrug resistance (MDR) transporters of the ...
48-168 3.48e-05

Multidrug resistance protein MdtG and similar multidrug resistance (MDR) transporters of the Major Facilitator Superfamily; This subfamily is composed of Escherichia coli multidrug resistance protein MdtG, Streptococcus pneumoniae multidrug resistance efflux pump PmrA, and similar multidrug resistance (MDR) transporters from bacteria. MDR transporters are drug/H+ antiporters (DHA) that mediate the efflux of a variety of drugs and toxic compounds, and confer resistance to these compounds. MdtG confers resistance to fosfomycin and deoxycholate. PmrA serves as an efflux pump for various substrates and is associated with fluoroquinolone resistance. MdtG-like MDR transporters belong to the bacterial MdtG-like and eukaryotic solute carrier 18 (SLC18) family of the Major Facilitator Superfamily (MFS) of transporters. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340949 [Multi-domain]  Cd Length: 380  Bit Score: 45.72  E-value: 3.48e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1293418642  48 PALIEDWGISRAEMGPILGAAMFGV-----AIGALVAGPLSDRYGRKRILLWSVALFALFSLAGAVAQSPSQLALMRFLT 122
Cdd:cd17391    20 PLYIEQLGVTSGGLVELWSGLAFSStflvsAIFSPIWGRLADRYGRKPMLLRASLGMAIVIGLMAFVTNVWQLLILRLLQ 99
                          90       100       110       120       130
                  ....*....|....*....|....*....|....*....|....*....|
gi 1293418642 123 GLGLGAVmPNCVTLVAEYMPERRKG----VMITLMYSGFNVGSGLGGFIA 168
Cdd:cd17391   100 GVFSGYV-PNATALIASQTPKEKSGwalgTLSTGVVAGTLIGPLLGGFLA 148
MFS_FucP_MFSD4_like cd17333
Bacterial fucose permease, eukaryotic Major facilitator superfamily domain-containing protein ...
14-197 3.50e-05

Bacterial fucose permease, eukaryotic Major facilitator superfamily domain-containing protein 4, and similar proteins; This family is composed of bacterial L-fucose permease (FucP), eukaryotic Major facilitator superfamily domain-containing protein 4 (MFSD4) proteins, and similar proteins. L-fucose permease facilitates the uptake of L-fucose across the boundary membrane with the concomitant transport of protons into the cell; it can also transport L-galactose and D-arabinose. The MFSD4 subfamily consists of two vertebrate members: MFSD4A and MFSD4B. The function of MFSD4A is unknown. MFSD4B is more commonly know as Sodium-dependent glucose transporter 1 (NaGLT1), a primary fructose transporter in rat renal brush-border membranes that also facilitates sodium-independent urea uptake. The FucP/MFSD4 family belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340891 [Multi-domain]  Cd Length: 372  Bit Score: 45.78  E-value: 3.50e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1293418642  14 DARPVSRFQWN--VLLLCFIIIMLDGYDAAVMGFVAPALIEDWGISRAEMGPILGAAMFGVAIGALVAGPLSDRYGRKRI 91
Cdd:cd17333   188 FSASASRLLRNpsIILGALALFLYVGAETAFSSWVPSYLVEKKHVSDGLAGYLLSGFWVGITIGRLLGGPISRRIKPHTL 267
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1293418642  92 LLWSVALFALFSLAGAVAQSPSQLALMRFLTGLGLGAVMPNCVTLVAEYMPeRRKGVMITLMYSGFNVGSGLGGFIAAGL 171
Cdd:cd17333   268 LVLSGSGALLGLLILLLAPTLVVGLVATALLGLFMAALFPTILSLGISNLP-YAKGKGTSVLLAAGSIGGAIIPFIMGFI 346
                         170       180
                  ....*....|....*....|....*.
gi 1293418642 172 LSHYSWHSALIFGGVLPLVVLPFMIV 197
Cdd:cd17333   347 AEAVGIQTAMLLITILYAIIFVLALL 372
BtlA COG2270
MFS-type transporter involved in bile tolerance, Atg22 family [General function prediction ...
40-192 5.25e-05

MFS-type transporter involved in bile tolerance, Atg22 family [General function prediction only];


Pssm-ID: 441871 [Multi-domain]  Cd Length: 424  Bit Score: 45.53  E-value: 5.25e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1293418642  40 AAVMGFVAPALIEDWGISRAEMGPILGAAMFGVAIGALVAGPLSDRYGRKRILLWSVALFALFSLAGAVAQSPSQLALMR 119
Cdd:COG2270   255 QTVIAFAGIYAAGVLGFSTTELIVFGLLVQIVAALGALLFGRLDDRIGPKRVILVSLVIWIVVCLAAYFLTTALAFWILG 334
                          90       100       110       120       130       140       150
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1293418642 120 FLTGLGLGAVMPNCVTLVAEYMPERRKGVmitlMYSGFNVGSGLGGFIAAGLLSHYSWHSALIFGGVLPLVVL 192
Cdd:COG2270   335 LLIGLVMGGIQALSRSLLARLIPPGREAE----FFGLYALSGKAASFLGPLLFGLVTQLTGSQRLGILSLIVF 403
MFS_SLC46_TetA_like cd17330
Eukaryotic Solute carrier 46 (SLC46) family, Bacterial Tetracycline resistance proteins, and ...
18-197 5.89e-05

Eukaryotic Solute carrier 46 (SLC46) family, Bacterial Tetracycline resistance proteins, and similar proteins of the Major Facilitator Superfamily of transporters; This family is composed of the eukaryotic proteins MFSD9, MFSD10, MFSD14, and SLC46 family proteins, as well as bacterial multidrug resistance (MDR) transporters such as tetracycline resistance protein TetA and multidrug resistance protein MdtG. MDR transporters are drug/H+ antiporters (DHA) that mediate the efflux of a variety of drugs and toxic compounds, and confer resistance to these compounds. TetA proteins confer resistance to tetracycline while MdtG confers resistance to fosfomycin and deoxycholate. The Solute carrier 46 (SLC46) family is composed of three vertebrate members (SLC46A1, SLC46A2, and SLC46A3), the best-studied of which is SLC46A1, which functions both as an intestinal proton-coupled high-affinity folate transporter involved in the absorption of folates and as an intestinal heme transporter which mediates heme uptake. MFSD10 facilitates the uptake of organic anions such as some non-steroidal anti-inflammatory drugs (NSAIDs) and confers resistance to such NSAIDs. The SLC46/TetA-like family belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340888 [Multi-domain]  Cd Length: 349  Bit Score: 44.88  E-value: 5.89e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1293418642  18 VSRFQWNVLLLCFIIIMLDGYDAAVMGFVAPALIEDWGISRAEMGPIL-GAAMFGVAIGALVAGPLSDRYGRKRILLWSV 96
Cdd:cd17330   169 VLFFLPPLRRLLLVYFLIALAFAGLESVFSLFLKDRFGFSPSQIGLLLaLVGIAGILAQLLLIPRLAKRLGERKLLRLGL 248
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1293418642  97 ALFALFSLAGAVAQSPSQLALMRFLTGLGLGAVMPNCVTLVAEYMPERRKGVMITLMYSGFNVGSGLGGFIAAGLLSHYS 176
Cdd:cd17330   249 LLAIIGLLLLPFASSVPLLVLAAAILAFGTGIVFPALSALLSKSVPSKEQGKAQGIIQSLQSLARIIGPLLAGPLYSFLG 328
                         170       180
                  ....*....|....*....|.
gi 1293418642 177 WHSALIFGGVLPLVVLPFMIV 197
Cdd:cd17330   329 PGVPFLLAAGLLLIALFLLSL 349
MFS_SV2_like cd17316
Metazoan Synaptic vesicle glycoprotein 2 (SV2) and related small molecule transporters of the ...
258-433 6.01e-05

Metazoan Synaptic vesicle glycoprotein 2 (SV2) and related small molecule transporters of the Major Facilitator Superfamily; This family is composed of metazoan synaptic vesicle glycoprotein 2 (SV2) and related small molecule transporters including those that transport inorganic phosphate (Pht), aromatic compounds (PcaK and related proteins), proline/betaine (ProP), alpha-ketoglutarate (KgtP), citrate (CitA), shikimate (ShiA), and cis,cis-muconate (MucK), among others. SV2 is a transporter-like protein that serves as the receptor for botulinum neurotoxin A (BoNT/A), one of seven neurotoxins produced by the bacterium Clostridium botulinum. BoNT/A blocks neurotransmitter release by cleaving synaptosome-associated protein of 25 kD (SNAP-25) within presynaptic nerve terminals. Also included in this family is synaptic vesicle 2 (SV2)-related protein (SVOP) and similar proteins. SVOP is a transporter-like nucleotide binding protein that localizes to neurotransmitter-containing vesicles. The SV2-like family belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340874 [Multi-domain]  Cd Length: 353  Bit Score: 44.90  E-value: 6.01e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1293418642 258 TIALWLTYFMGLFVIYLLNGWLPTI--LRSGGLSLQQAAMMTGLFQLGGPLGGILVGMLMDRASAKAVIAATYFLGCLCL 335
Cdd:cd17316     1 LLLAGLGWFFDAYDFFLIGFVAPVLaaEFSLGLSLLQTGLLFAAGFLGRPIGALLFGYLGDRIGRKKALILTLLLFGLAT 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1293418642 336 LSQGLMDfGSAALSVLIFISGMCINGAQNGLQAYSPAYYQTEIRATGVSWMHGIGRTGAILSSTLGGMLMLAVPGHSSIF 415
Cdd:cd17316    81 LLIGLLP-TPILLLVLRFLQGIGIGGEYPGASTYVAEFAPSKRRGFALGLLQSGWALGALLAALVASLLIPLLSGDWGWR 159
                         170
                  ....*....|....*...
gi 1293418642 416 LVLGLPACLAGICILLHR 433
Cdd:cd17316   160 ILFLIGALPALLALLLRR 177
MFS_DtpA_like cd17346
Dipeptide and tripeptide permease A (DtpA)-like subfamily of the Major Facilitator Superfamily ...
55-186 8.68e-05

Dipeptide and tripeptide permease A (DtpA)-like subfamily of the Major Facilitator Superfamily of transporters; The DtpA-like subfamily includes four Escherichia coli proteins: dipeptide and tripeptide permeases A (DtpA, TppB or YdgR), B (DtpB or YhiP), C (DtpC or YjdL), and D (DtpD or YbgH). They are proton-dependent permeases that transport di- and tripeptides. DtpA and DtpB display a preference for di- and tripeptides composed of L-amino acids. DtpC shows higher specificity for dipeptides compared to tripeptides, and prefers dipeptides containing a C-terminal lysine residue. The DtpA-like subfamily belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340904 [Multi-domain]  Cd Length: 399  Bit Score: 44.49  E-value: 8.68e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1293418642  55 GISRAEMGPILGAAMFGVAIGALVAGPLSDRY-GRKRILLWSVALFALFSLAGAVAQ-SPSQLALMRFLTGLGLGAVMPN 132
Cdd:cd17346    36 GFSEADAASIYGAYTALVYLTPIIGGWLADKVlGARRTVFIGGILMALGYLLLALSPfSVSMLYLGLALIIVGNGLFKPN 115
                          90       100       110       120       130
                  ....*....|....*....|....*....|....*....|....*....|....*..
gi 1293418642 133 CVTLVAEYMPE---RRKGVMiTLMYSGFNVGSGLGGFIAAGLLSHYSWHSALIFGGV 186
Cdd:cd17346   116 ISSLVGKLYDEndpRRDSGF-SIFYMGINLGAFLAPLLCGTLGDNYGYHYGFGLAAV 171
MFS_SLC22A1_2_3 cd17379
Solute carrier family 22 members 1, 2, and 3 (also called Organic cation transporters 1, 2, ...
70-155 8.84e-05

Solute carrier family 22 members 1, 2, and 3 (also called Organic cation transporters 1, 2, and 3) of the Major Facilitator Superfamily of transporters; This sufamily includes solute carrier family 22 member 1 (SLC22A1, also called organic cation transporter 1 or OCT1), SLC22A2 (or OCT2), SLC22A3 (or OCT3), and similar proteins. OCT1-3 have similar basic functional properties: they are able to translocate a variety of structurally different organic cations in both directions across the plasma membrane; to translocate organic cations independently from sodium, chloride or proton gradients; and to function as electrogenic uniporters for cations or as electroneutral cation exchangers. They show overlapping but distinct substrate and inhibitor specificities, and different tissue expression pattern. In humans, OCT1 is strongly expressed in the liver, OCT2 is highly expressed in the kidney where it is localized at the basolateral membrane of renal proximal tubules, and OCT3 is most strongly expressed in skeletal muscle. OCTs are broad-specificity transporters that play a critical role in the excretion and distribution of endogeneous organic cations and for the uptake, elimination and distribution of cationic drugs, toxins, and environmental waste products. The SLC22A1-3 subfamily belongs to the Solute carrier 22 (SLC22) family of organic cation/anion/zwitterion transporters of the Major Facilitator Superfamily (MFS) of membrane transport proteins. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340937 [Multi-domain]  Cd Length: 340  Bit Score: 44.26  E-value: 8.84e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1293418642  70 FGVAIGALVAGPLSDRYGRKRILLWSVALFALFSLAGAVAQSPSQLALMRFLTGLGLGAVMPNCVTLVAEYM-PERRK-- 146
Cdd:cd17379    44 LGFLIGSIVIGYLADRFGRKVCFLISILGNGVSGVLMAFSPNYPWFLIFRFLQGLFGKGGWMTGYVLVTEFVgSKYRRtv 123

                  ....*....
gi 1293418642 147 GVMITLMYS 155
Cdd:cd17379   124 GIVYQMFFT 132
MFS_MFSD10 cd17389
Major facilitator superfamily domain-containing protein 10; Major facilitator superfamily ...
69-201 1.05e-04

Major facilitator superfamily domain-containing protein 10; Major facilitator superfamily domain-containing protein 10 (MFSD10) is also called tetracycline transporter-like protein (TETRAN). It is expressed in various human tissues, including the kidney. In cultured cells, its overexpression facilitated the uptake of organic anions such as some non-steroidal anti-inflammatory drugs (NSAIDs). MFSD10/TETRAN overexpression cause resistance to some NSAIDs, suggesting that it may be an organic anion transporter that serves as an efflux pump for some NSAIDs and various other organic anions at the final excretion step. MFSD10 belongs to the Eukaryotic Solute carrier 46 (SLC46)/Bacterial Tetracycline resistance (TetA) -like (SLC46/TetA-like) family of the Major Facilitator Superfamily (MFS) of transporters. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340947 [Multi-domain]  Cd Length: 391  Bit Score: 44.19  E-value: 1.05e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1293418642  69 MFGVAIGAL----------VAGPLSDRYGRKRILLWSVALFALFSLAGAVAQSPSQLALMRFLTGLGLGAVMPnCVTLVA 138
Cdd:cd17389    64 LFGGLIGSLfsllqflsspITGAASDVYGRKPVLLLTMIGLAISYALWAVSRSFTIFLLSRIVGGISKGNVSL-STAIVA 142
                          90       100       110       120       130       140
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1293418642 139 EYMP--ERRKG-VMITLMYS-GFNVGSGLGGFIAAGLLSH--YSWHSALIFGGVLPLVVLPFMIVMLPE 201
Cdd:cd17389   143 DVTSpkKRSKGmALIGVAFSlGFIIGPMIGAYFASFTRSLgeVFFSMPALFALVLALADLLFIFFFLPE 211
MFS_GLUT12_Class3 cd17435
Glucose transporter type 12 (GLUT12), a Class 3 GLUT, of the Major Facilitator Superfamily of ...
64-209 1.60e-04

Glucose transporter type 12 (GLUT12), a Class 3 GLUT, of the Major Facilitator Superfamily of transporters; Glucose transporter type 12 (GLUT12) is also called Solute carrier family 2, facilitated glucose transporter member 12 (SLC2A12). It is a facilitative glucose transporter, classified as a Class 3 GLUT, and is expressed in the heart, skeletal muscle, prostate, and small intestine, and is highly upregulated in breast ductal cell carcinoma. It plays a role as a secondary insulin-sensitive glucose transporter in insulin-dependent tissues. The GLUT12 subfamily belongs to the Glucose transporter -like (GLUT-like) family of the Major Facilitator Superfamily (MFS) of membrane transport proteins. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340993 [Multi-domain]  Cd Length: 376  Bit Score: 43.63  E-value: 1.60e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1293418642  64 ILGAAMFGVAIGALVAGPLSDRYGRKRILLWSVALFALFSLAGAVAQSPSQLALMRFLTGLGLGAVMPNCVTLVAEYMPE 143
Cdd:cd17435    41 VVSSLLIGALLASLTGGVLIDRYGRRTAIILTSCLLVLGSLLLVCSVSYTVLIVGRIAIGVSISLSSIATCVYIAEIAPQ 120
                          90       100       110       120       130       140
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1293418642 144 RRKGVMITLmYSGFNVGSGLGGFIAAGLLSHYSWHSALIFGGVLPLVVLPfMIVM--LPESAMNMVAR 209
Cdd:cd17435   121 HRRGLLVSL-NELMIVIGILLAYISNYAFANVSNGWKYMFGLVIPLAALQ-AIAMyfLPPSPRFLVMK 186
emrD PRK11652
multidrug transporter EmrD;
48-202 1.65e-04

multidrug transporter EmrD;


Pssm-ID: 183259 [Multi-domain]  Cd Length: 394  Bit Score: 43.74  E-value: 1.65e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1293418642  48 PALIEDWGISRAEMGPILGAAMFGVAIGALVAGPLSDRYGRKRILLWSVALFALFSLAGAVAQSPSQLALMRFLTGLGLG 127
Cdd:PRK11652   32 ADMARDLNVREGAVQAVMAAYLLTYGLSQLFYGPLSDRVGRRPVILVGMSIFILGTLVALFAHSLTVLIAASAIQGLGTG 111
                          90       100       110       120       130       140       150
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1293418642 128 AVMPNCVTLvaeyMPERRKGVMITLMYSGFNVG---SGLGGFIAAGLLSHY-SWHSALIFGGVLPLVVLPFMIVMLPES 202
Cdd:PRK11652  112 VGGVMARTL----PRDLYEGTQLRHANSLLNMGilvSPLLAPLIGGLLTTLfGWRACYLFLLLLGAGVTFSMARWMPET 186
PRK09874 PRK09874
multidrug efflux MFS transporter MdtG;
74-182 1.65e-04

multidrug efflux MFS transporter MdtG;


Pssm-ID: 182127 [Multi-domain]  Cd Length: 408  Bit Score: 43.76  E-value: 1.65e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1293418642  74 IGALVAGP----LSDRYGRKRILLWSVALFALFSLAGAVAQSPSQLALMRFLTGLGLGAVMPNCVTLVAEYMPERRKGVM 149
Cdd:PRK09874  269 VAALLSAPrlgkLGDRIGPEKILITALIFSVLLLIPMSFVQTPLQLGILRFLLGAADGALLPAVQTLLVYNSSNQIAGRI 348
                          90       100       110
                  ....*....|....*....|....*....|...
gi 1293418642 150 ITLMYSGFNVGSGLGGFIAAGLLSHYSWHSALI 182
Cdd:PRK09874  349 FSYNQSFRDIGNVTGPLMGAAISANYGFRAVFL 381
MFS_MelB_like cd17332
Salmonella enterica Na+/melibiose symporter MelB and similar transporters of the Major ...
22-175 1.75e-04

Salmonella enterica Na+/melibiose symporter MelB and similar transporters of the Major Facilitator Superfamily; This family is composed of Salmonella enterica Na+/melibiose symporter MelB, Major Facilitator Superfamily domain-containing proteins, MFSD2 and MFSD12, and other sugar transporters. MelB catalyzes the electrogenic symport of galactosides with Na+, Li+ or H+. The MFSD2 subfamily is composed of two vertebrate members, MFSD2A and MFSD2B. MFSD2A is more commonly called sodium-dependent lysophosphatidylcholine symporter 1 (NLS1). It is an LPC symporter that plays an essential role for blood-brain barrier formation and function. Inactivating mutations in MFSD2A cause a lethal microcephaly syndrome. MFSD2B is a potential risk or protect factor in the prognosis of lung adenocarcinoma. MelB-like family belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340890 [Multi-domain]  Cd Length: 424  Bit Score: 43.75  E-value: 1.75e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1293418642  22 QWNVLLLCFIIIMLDGydaAVMGFVAPALIEDWGISRAEMGPILGAAMFGVAIGALVAGPLSDRYGRKRILLWSVALFAL 101
Cdd:cd17332   222 PFLILLLAYLLYFLAF---NIVNTVLVYYFKYVLGGRAELVLLLLLILSGALLALLPWPPLKKRFGKKKAFFIGLLLAIL 298
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1293418642 102 FSLAGAVAQSPSQLALMRFLTGLGLG---------AVMPNCVTLVAEYMPERRKGVMITLMYSGFNVGSGLGGFIAAGLL 172
Cdd:cd17332   299 GLLLLFFLPPGNLVLILVLAVLAGIGygganllpwAMLADVIDYGELKTGKRREGIFYSVMTFFRKLGLALAGALVGLIL 378

                  ...
gi 1293418642 173 SHY 175
Cdd:cd17332   379 SLA 381
MFS_MosC_like cd17393
Membrane protein MosC and similar proteins of the Major Facilitator Superfamily of ...
48-128 1.80e-04

Membrane protein MosC and similar proteins of the Major Facilitator Superfamily of transporters; The gene encoding Sinorhizobium meliloti membrane protein MosC is part of the mos locus, which encodes the biosynthesis of the rhizopine 3-O-methyl-scyllo-inosamine. MosC belongs to the bacterial fucose permease, eukaryotic Major facilitator superfamily domain-containing protein 4 (FucP/MFSD4) family of the Major Facilitator Superfamily (MFS) of transporters. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340951 [Multi-domain]  Cd Length: 373  Bit Score: 43.40  E-value: 1.80e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1293418642  48 PALIEDWGISRAEMGPILGAAMFGVAIGALVAGPLSDRYGRKRILLWSVALFALFSLAGAVAQSPSQLALMRFLTGLGLG 127
Cdd:cd17393    23 PAIKDRLGLSDAALGLLLLALGVGALVAMPLAGRLVARFGSRRVTRLGALLLLLALLLLGLAPSVPALALALFLFGAANG 102

                  .
gi 1293418642 128 A 128
Cdd:cd17393   103 A 103
MFS_CitA cd17368
Citrate-proton symporter of the Major Facilitator Superfamily of transporters; Citrate-proton ...
34-324 1.81e-04

Citrate-proton symporter of the Major Facilitator Superfamily of transporters; Citrate-proton symporter, also called citrate carrier protein or citrate transporter or citrate utilization protein A (CitA), is a proton symporter that functions in the uptake of citrate across the boundary membrane. It allows the utilization of citrate as a sole source of carbon and energy. In Klebsiella pneumoniae, the gene encoding this protein is called citH, instead of citA, which is the case for Escherichia coli and other organisms. CitA belongs to the Metazoan Synaptic Vesicle Glycoprotein 2 (SV2) and related small molecule transporter family (SV2-like) of the Major Facilitator Superfamily (MFS) of membrane transport proteins. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340926 [Multi-domain]  Cd Length: 407  Bit Score: 43.52  E-value: 1.81e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1293418642  34 MLDGYDAAVMGFVAPALIEDWGISRAEMGPILGA-AMFGVA-----IGALVAGPLSDRYGRKRILLWSVALFALFSLAGA 107
Cdd:cd17368     9 ALEFFDFGVYGFFAVYIGRLFFPSGSEFASLLLTfATFGVGffmrpIGAIVLGAYADRIGRKPAMTLTLAIMALGTLLIA 88
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1293418642 108 VAQS--------PSQLALMRFLTGLGLGAVMPNCVTLVAEYMPERRKGVMITLMYSGFNVGSGLGGFIAAGL-------- 171
Cdd:cd17368    89 LAPTyatigiaaPLLVLLARLLQGFAAGGEVGGVTAYLVEAAPPGRRGFYTSWQSASQQVAIVAGALVGYLLsltltaea 168
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1293418642 172 LSHYSWHSALIFGgvlpLVVLPFMIVMlpesamnmvaRRLPGEQIARalnrlggqftaetvFQLNAPPiTRSSKVAQLFR 251
Cdd:cd17368   169 LAEWGWRIPFFIG----LLIIPLGLWL----------RRSLEETEAF--------------LERKARP-TRRELFALLAN 219
                         250       260       270       280       290       300       310
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1293418642 252 HGyaRGTIALWLTYFMGLFVIYLLNGWLPTILRSG-GLSLQQAAMMTGLFQLGGPLGGILVGMLMDRASAKAVI 324
Cdd:cd17368   220 NR--RIILLGMLLVAGSTVTFYFTTVYTPTYAKTVlGLSARDSFLVTLLAGVANFIWAPLGGALSDRIGRRPVL 291
MFS_MT3072_like cd17475
Mycobacterium tuberculosis uncharacterized MFS-type transporter MT3072 and similar ...
15-195 3.18e-04

Mycobacterium tuberculosis uncharacterized MFS-type transporter MT3072 and similar transporters of the Major Facilitator Superfamily; This family includes the Mycobacterium tuberculosis uncharacterized MFS-type transporter MT3072. It belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 341028 [Multi-domain]  Cd Length: 378  Bit Score: 42.61  E-value: 3.18e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1293418642  15 ARPVSRFQWNVLLLCFIIIMLDGYDAAVMGFVAPALIEDWGISRAEMGPILGAAMFGVAIGALVAGPLSDRYG---RKRI 91
Cdd:cd17475   190 SLKEVLRNRDVWLIAIAGALLVAPQFALLTFLLLFLHDHLGLSVVAAGALLAVAQLGGALGRIGLGRVSDRVFggrRRPV 269
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1293418642  92 LLWSVALFALFSLAGAV-AQSPSQLALMRFLTGLGLGAVMPNCV--TLVAEYMPERRKGVMITLMYSGFNVGSGLGGFIA 168
Cdd:cd17475   270 LVITAAIAAAALLVLSLlSPGTPLWLLVLLLILLGLFAIGWNGLylTLVAESAGPEQAGTALGLANTINFIGIAIGPPLF 349
                         170       180
                  ....*....|....*....|....*...
gi 1293418642 169 AGLLSH-YSWHSALIFGGVLPLVVLPFM 195
Cdd:cd17475   350 GLLVDAtHSYAPAWLALALLLVLAALLL 377
2A0114euk TIGR00894
Na(+)-dependent inorganic phosphate cotransporter; [Transport and binding proteins, Anions]
57-201 3.24e-04

Na(+)-dependent inorganic phosphate cotransporter; [Transport and binding proteins, Anions]


Pssm-ID: 129972 [Multi-domain]  Cd Length: 465  Bit Score: 42.81  E-value: 3.24e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1293418642  57 SRAEMGPILGAAMFGVAIGALVAGPLSDRYGRKRILLWSVALFALFSLAGAVAQSPSQ--LALMRFLTGLGLGAVMPNCV 134
Cdd:TIGR00894  74 SGALQGLILSSHFYGQIIIQIPVGYLAGKYVFKWSIGIGMFLSSVISIVIPWAAGGGIalVVFCRVIQGLAQGSVSPATH 153
                          90       100       110       120       130       140
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1293418642 135 TLVAEYMPERRKGVMITLMYSGFNVGSGLGGFIaAGLLSHYS--WHSALIFGGVLPLVVLPFMIVMLPE 201
Cdd:TIGR00894 154 KIIVKWAPPKERSRLLGMSTSGFQLGTFIFLPI-SGWLCESWggWPMIFYVFGIVGCAWSLLWFVFPAD 221
ProP COG0477
MFS family permease, includes anhydromuropeptide permease AmpG [Carbohydrate transport and ...
256-431 3.58e-04

MFS family permease, includes anhydromuropeptide permease AmpG [Carbohydrate transport and metabolism, Amino acid transport and metabolism, Inorganic ion transport and metabolism, General function prediction only];


Pssm-ID: 440245 [Multi-domain]  Cd Length: 295  Bit Score: 42.49  E-value: 3.58e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1293418642 256 RGTIALWLTYFMGLFVIYLLNGWLPTILRSGGLSLQQAAMMTGLFQLGGPLGGILVGMLMDRASAKAVIAATYFLGCLCL 335
Cdd:COG0477    14 RALLALALGTFLEGLDFTIVNVALPSIAADLGASSAQLGWIVSAYLLGRAIGLLLFGRLGDRYGRKRVLLIGLLLFGLAS 93
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1293418642 336 LSQGLMdFGSAALSVLIFISGMCINGAQNGLQAYSPAYYQTEIRATGVSWMHGIGRTGAILSSTLGGMLmLAVPGHSSIF 415
Cdd:COG0477    94 LLCGLA-PSPELLIAARALQGIGAGGLMPGALALIAELFPARERGRALGLWGAAIGLGLALGPLLGGLL-VAALGWRWIF 171
                         170
                  ....*....|....*.
gi 1293418642 416 LVLGLPACLAGICILL 431
Cdd:COG0477   172 LINAPLGLLALVLRLR 187
MFS_SLC37A1_2 cd17344
Solute carrier family 37 members 1 and 2 of the Major Facilitator Superfamily of transporters; ...
257-361 4.64e-04

Solute carrier family 37 members 1 and 2 of the Major Facilitator Superfamily of transporters; Solute carrier family 37 members 1 (SLC37A1) and 2 (SLC37A2) are also called sugar phosphate exchangers 1 (SPX1) and 2 (SPX2). SLC37A1 and SLC37A2 are ER-associated, Pi-linked antiporters that can transport glucose-6-phosphate (G6P) but are insensitive to chlorogenic acid, a competitive inhibitor of physiological ER G6P transport, unlike SLC37A4, the best characterized SLC37 family member and is the physiological G6P transporter (G6PT). SLC37A1 and SLC37A2 belong to the Organophosphate:Pi antiporter (OPA)/SLC37 family, whose members are integral membrane proteins responsible for the transport of specific organophosphates or sugar phosphates across biological membranes with the simultaneous translocation of inorganic phosphate into the opposite direction. The OPA/SLC37 family belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340902 [Multi-domain]  Cd Length: 400  Bit Score: 42.30  E-value: 4.64e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1293418642 257 GTIALWLTYFMGLFVIYLLNGWLPT-ILRSGGLSLQQAAMMTGLFQLGGPLGGILVGMLMDRASAKAVIAATYFLGC--L 333
Cdd:cd17344   212 GVIEFSLCLFFAKLVSYTFLYWLPLyISNTAILSAKKAGDLSTLFDVGGIVGGILAGYISDYTGGRATTCAAMLILAapM 291
                          90       100
                  ....*....|....*....|....*...
gi 1293418642 334 CLLSQGLMDFGSAALSVLIFISGMCING 361
Cdd:cd17344   292 LFIYNYFGQVSMTTNIVLLIVCGLLVNG 319
MFS_YajR_like cd17472
Escherichia coli inner membrane transport protein YajR and similar multidrug-efflux ...
80-202 4.65e-04

Escherichia coli inner membrane transport protein YajR and similar multidrug-efflux transporters of the Major Facilitator Superfamily; This family is composed of Escherichia coli inner membrane transport protein YajR and some uncharacterized multidrug-efflux transporters. YajR is a putative proton-driven major facilitator superfamily (MFS) transporter found in many gram-negative bacteria. Unlike most MFS transporters, YajR contains a C-terminal, cytosolic YAM domain, which may play an essential role for the proper functioning of the transporter. YajR-like transporters belong to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 341025 [Multi-domain]  Cd Length: 371  Bit Score: 42.20  E-value: 4.65e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1293418642  80 GPLSDRYGRKRILLWSVALFALFSLAGAVAQSPSQLALMRFLTglGLGAVMPNCVTLVAEYMPERRKGVMITLM----YS 155
Cdd:cd17472    53 GLLSDRIGRKPVILFGLLLFIAGSLLAAYATSIYGLILGRALQ--GSGAISSVVMALLADLTREENRTKAMALIgasiGI 130
                          90       100       110       120
                  ....*....|....*....|....*....|....*....|....*..
gi 1293418642 156 GFNVGSGLGGFIAAgllsHYSWHSALIFGGVLPLVVLPFMIVMLPES 202
Cdd:cd17472   131 AFAISMVLGPLLAA----HLGVSGLFLITAILSLVSLLILLFFVPDP 173
MFS_4 pfam06779
Uncharacterized MFS-type transporter YbfB; This family represents putative bacterial membrane ...
48-203 6.19e-04

Uncharacterized MFS-type transporter YbfB; This family represents putative bacterial membrane proteins which may be sugar transporters. Members carry twelve transmembrane regions which are characteriztic of members of the major facilitator sugar-transporter superfamily.


Pssm-ID: 399632 [Multi-domain]  Cd Length: 365  Bit Score: 41.97  E-value: 6.19e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1293418642  48 PALIEDWGISRAEMGPILGAAMFGVAIGALVA--GPLSDRYGRKRILLWSVALFALFSLAGAVAQSPSQLALMRFLTGLG 125
Cdd:pfam06779  17 PVMIAEGQFSLSQAGLLAAANYAGYLAGALLAsfAWRHGASRLRPALLAGLLATVLLLLAMAATSSFWAVLLIRFLAGVA 96
                          90       100       110       120       130       140       150
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1293418642 126 LGAVMPNCVTLVAEYMPERRKGVMITLMYSGFNVGSGLGGFIAAGLLSHY-SWHSALIFGGVLPLVVLPFMIVMLPESA 203
Cdd:pfam06779  97 SAAVMIFGSSLILGHATAARRAFVGALLFAGVGIGIALSGLLVPLGLQLGlGGSSLWYGAGVLSAVLTLAVFPLLPRRA 175
MFS_SLC17A5 cd17381
Solute carrier family 17 member 5 (also called sialin) of the Major Facilitator Superfamily of ...
62-200 7.19e-04

Solute carrier family 17 member 5 (also called sialin) of the Major Facilitator Superfamily of transporters; Solute carrier family 17 member 5 (SLC17A5) is also called sialin, H(+)/nitrate cotransporter, H(+)/sialic acid cotransporter (AST), membrane glycoprotein HP59, or vesicular H(+)/aspartate-glutamate cotransporter. It transports glucuronic acid and free sialic acid out of the lysosome after its cleavage from sialoglycoconjugates, which is required for normal CNS myelination. It also mediates the membrane potential-dependent uptake of aspartate and glutamate into synaptic vesicles and synaptic-like microvesicles. In the plasma membrane, it functions as a nitrate transporter. Recessive mutations in the SLC17A5 gene cause the allelic disorders, Infantile sialic acid storage disease (ISSD) and Salla disease (a predominantly neurological disorder). SLC17A5 belongs to the Solute carrier 17 (SLC17) family of the Major Facilitator Superfamily (MFS) of membrane transport proteins. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340939 [Multi-domain]  Cd Length: 397  Bit Score: 41.69  E-value: 7.19e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1293418642  62 GPILGAAMFGVAIGALVAGPLSDRYGRKRILLWSVALFALFSLAGAVAQS--PSQLALMRFLTGLGLGAVMPNCVTLVAE 139
Cdd:cd17381    68 GWILGSFFYGYIITQIPGGYLASKIGGKLLLGFGILGTAVFTLLTPLAADlgAGYLIAVRALEGLGEGVTFPAMHAMWAS 147
                          90       100       110       120       130       140
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1293418642 140 YMPERRKGVMITLMYSgfnvGSGLGGFIA---AGLLSHY-SWHSAL-IFGGVLPLVVLPFMIVMLP 200
Cdd:cd17381   148 WAPPLERSRLLTISYA----GAQLGTVVSlplSGLICYYlDWTYVFyIFGAVGLLWFFLWIWLVMP 209
MFS_GLUT_Class2 cd17432
Class 2 Glucose transporters (GLUTs) of the Major Facilitator Superfamily; GLUTs, also called ...
70-226 9.28e-04

Class 2 Glucose transporters (GLUTs) of the Major Facilitator Superfamily; GLUTs, also called Solute carrier family 2, facilitated glucose transporters (SLC2A), are a family of proteins that facilitate the transport of hexoses such as glucose and fructose. There are fourteen GLUTs found in humans; they display different substrate specificities and tissue expression. They have been categorized into three classes based on sequence similarity: Class 1 (GLUTs 1-4, 14); Class 2 (GLUTs 5, 7, 9, and 11); and Class 3 (GLUTs 6, 8, 10, 12, and HMIT). GLUT5, also called Solute carrier family 2, facilitated glucose transporter member 5 (SLC2A5), is a well-established fructose transporter found in the small intestine. GLUT7 (or SLC2A7) is a high-affinity glucose and fructose transporter expressed in the small intestine and colon. GLUT9 (or SLC2A9) transports urate and fructose, and is most strongly expressed in the basolateral membranes of proximal renal tubular cells, liver and placenta. It may play a role in urate reabsorption by proximal tubules. GLUT11 (or SLC2A11) is a facilitative glucose transporter expressed in heart and skeletal muscle. GLUT proteins are comprised of about 500 amino acid residues, possess a single N-linked oligosaccharide, and have 12 transmembrane segments. They belong to the Glucose transporter -like (GLUT-like) family of the Major Facilitator Superfamily (MFS) of membrane transport proteins. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340990 [Multi-domain]  Cd Length: 452  Bit Score: 41.45  E-value: 9.28e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1293418642  70 FGVAIGALVAGPLSDRYGRKRILLWS---VALFALFSLAGAVAQSPSQLALMRFLTGLGLGAVMpNCVTL-VAEYMPERR 145
Cdd:cd17432    61 LGGLFGSLLVGPLVIRLGRKGTLLLNnifAIVAAILMGLSKIAKSFEMIIVGRFLVGINAGISL-NVVPMyLGESAPKNL 139
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1293418642 146 KGVmitlmysgfnVGSGLGGFIAAGLLshyswhSALIFG---------------------GVLPLVVLPFmivmLPESAM 204
Cdd:cd17432   140 RGA----------VGLVPAIFITLGIL------LGQVLGlrellgneegwplllaltgvpALLQLLTLPF----FPESPR 199
                         170       180
                  ....*....|....*....|..
gi 1293418642 205 NMVARRLPGEQIARALNRLGGQ 226
Cdd:cd17432   200 YLLIEKGDEEAARKALQRLRGK 221
MFS_MCT_like cd17314
Monocarboxylate transporter (MCT) family and similar transporters of the Major Facilitator ...
23-431 9.49e-04

Monocarboxylate transporter (MCT) family and similar transporters of the Major Facilitator Superfamily; The group is composed of the Monocarboxylate transporter (MCT) family in animals and similar transporters from fungi, plants, archaea, and bacteria. MCT is also called Solute carrier family 16 (SLC16 or SLC16A). It is composed of 14 members, MCT1-14. MCTs play an integral role in cellular metabolism via lactate transport and have been implicated in metabolic synergy in tumors. MCTs have been found to facilitate the transport across the plasma membrane not only of monocarboxylates (MCT1-4), but also thyroid hormones (MCT8/10), and aromatic acids (MCT10). Yeast MCT homologous (Mch) proteins are not involved in the uptake of monocarboxylates; their substrates are not known. The MCT-like family belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340872 [Multi-domain]  Cd Length: 385  Bit Score: 41.24  E-value: 9.49e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1293418642  23 WNVLLLCFII-IMLDGYDAAVmGFVAPALIEDWGISRAEMGPILGAAMFGVAIGALVAGPLSDRYGRKRILLWSVALF-A 100
Cdd:cd17314     2 WFVLYVSFLLsAMSTGFILSW-SLFYQPWQDAFGYSSSQIATAASLSNLGMLLTQPILGFIADSFGPRPLMALAGIMVlA 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1293418642 101 LFSLAGAVAQSPSQLALMRFLTGLGLGAVMPNCVTLVAEYMPERRkGVMITLMYSGFNVGSGLGGFIAAGLLSHYSWHSA 180
Cdd:cd17314    81 GYTYLSYVFNSFPLSYACFVFIGAGTGILYGSAVLVTTQYFPDTK-GLALGLPTTGYSLGLVLGSPLLRILWVFYGLALV 159
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1293418642 181 LIFGGVLPLVVLPFMIVMLPESamnmvarrlpgEQIARALNRLGGQFTAETVFQLNAPPitrsskvaqlfrhgyargTIA 260
Cdd:cd17314   160 YTILGILAAIVLSVVSLLGFKE-----------PPDNQARLHVQKKKTQTMGEIFRDKV------------------FWI 210
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1293418642 261 LWLTYFMGLFVIYLLNGWLPTILRSGGLSLQQAAM-MTGLFQLGGPLGGILVGMLMDRASAKAVI-AATYFLG----CLC 334
Cdd:cd17314   211 LFIAIFLVLIGGFLFIANMASLVRSLQLDAPSFVTkLMSIYGLFNAFGRLLWGIVADFFGGRLSTlSILLTILglglCAF 290
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1293418642 335 LLSQGLMDFGSAALSVLIFISgmcINGAQNGLQAYSPAYYQTEIRATGVSWMHGIGRTGAILSSTLGGMLMLAVPGHSSI 414
Cdd:cd17314   291 LFLLKMTPVGLVLTGSLLGFS---YGGLFTVYPATVSTVFGTESFATLYGILLFAPAIGSILGPMLGAKFYDRTPSYISA 367
                         410
                  ....*....|....*..
gi 1293418642 415 FLVLGLPACLAGICILL 431
Cdd:cd17314   368 VYIYAVIVFLASAILLA 384
MFS_SLC22A4_5_OCTN1_2 cd17376
Solute carrier family 22 members 4 and 5 (also called Organic cation/carnitine transporters 1 ...
62-125 1.15e-03

Solute carrier family 22 members 4 and 5 (also called Organic cation/carnitine transporters 1 and 2) of the Major Facilitator Superfamily of transporters; This subfamily is composed of solute carrier family 22 members 4 (SLC22A4) and 5 (SLC22A5), and similar proteins. SLC22A4 is also called ergothioneine transporter (ETT) or organic cation/carnitine transporter 1 (OCTN1). It is a sodium-ion dependent, low affinity carnitine transporter, and a highly specific transporter for the uptake of ergothioneine (ET), a thiolated derivative of histidine with antioxidant properties. ET is a natural compound produced only by certain fungi and bacteria and must be absorbed from the diet by humans and other vetebrates. SLC22A5, also called organic cation/carnitine transporter 2 (OCTN2), is a sodium-ion dependent, high affinity carnitine transporter involved in the active cellular uptake of carnitine. SLC22A4/5 belongs to the Solute carrier 22 (SLC22) family of organic cation/anion/zwitterion transporters of the Major Facilitator Superfamily (MFS) of membrane transport proteins. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340934 [Multi-domain]  Cd Length: 342  Bit Score: 40.91  E-value: 1.15e-03
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1293418642  62 GPILGAAMF-GVAIGALVAGPLSDRYGRKRILLWSVALFALFSLAGAVAQSPSQLALMRFLTGLG 125
Cdd:cd17376    37 VPLTTSLFFvGVLLGSFISGQLSDRFGRKKVLFATMAVQTGFSFLQIFSPSWEMFTVLFVIVGMG 101
COG4262 COG4262
Predicted spermidine synthase with an N-terminal membrane domain [General function prediction ...
64-192 1.70e-03

Predicted spermidine synthase with an N-terminal membrane domain [General function prediction only];


Pssm-ID: 443404 [Multi-domain]  Cd Length: 426  Bit Score: 40.62  E-value: 1.70e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1293418642  64 ILGAAMFGVAIGALVAGPLSDRYGRKRILL-WSVALFALFS---LAGAVAQSPSQLALMR-----FLTGLGLGAVMPNCV 134
Cdd:COG4262    48 VIGVFLFAMGLGSYLSRRVADRLLRAFIRLeLLLALLGGLSallLFALFAFLLGALFLLAlyllvLLIGLLIGAEIPLLM 127
                          90       100       110       120       130       140
                  ....*....|....*....|....*....|....*....|....*....|....*....|
gi 1293418642 135 TLVAEYMPERRKGVmiTLMYSGFNVGSGLGGFIAAGLLSHY--SWHSALIFGGVLPLVVL 192
Cdd:COG4262   128 RLLERRREELGSAV--GRVYAADYLGALVGSLLFPFLLLPAlgLVRTALLFGLLNAAVAL 185
PRK11663 PRK11663
glucose-6-phosphate receptor/MFS transporter UhpC;
236-360 1.71e-03

glucose-6-phosphate receptor/MFS transporter UhpC;


Pssm-ID: 183266 [Multi-domain]  Cd Length: 434  Bit Score: 40.46  E-value: 1.71e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1293418642 236 NAPPITRSSKVAQLFRHGYARGTIALWLTYFMGLFVIYLLNGWLPTILRSGGLSLQQAAMMTGLFQLGGPLGGILVGMLM 315
Cdd:PRK11663    3 DAPLITDKHEIDARYRYWRRHILITMYLGYALFYFTRKSFNAAMPEMLADLGLSRSDIGLLATLFYITYGVSKFVSGIVS 82
                          90       100       110       120
                  ....*....|....*....|....*....|....*....|....*..
gi 1293418642 316 DRASAKaviaatYFLGcLCLLSQGLMD--FGSAAlSVLIFISGMCIN 360
Cdd:PRK11663   83 DRSNAR------YFMG-IGLIATGIINilFGFSS-SLWAFALLWVLN 121
2A0109 TIGR00887
phosphate:H+ symporter; This model represents the phosphate uptake symporter subfamily of the ...
20-175 1.93e-03

phosphate:H+ symporter; This model represents the phosphate uptake symporter subfamily of the major facilitator superfamily (pfam00083). [Transport and binding proteins, Anions]


Pssm-ID: 129965 [Multi-domain]  Cd Length: 502  Bit Score: 40.48  E-value: 1.93e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1293418642  20 RFQWNVLLLCFIIIM---LDGYDAAVMGFVAPALIEDWGISRAEMGPILGAAMFGVA-----IGALVAGPLSDRYGRKRI 91
Cdd:TIGR00887   9 PFGWQHFRAIVIAGVgffTDSYDLFCISLVTKMLGYVYYHGKGPLPSSVSAAVNGSAsigtlAGQLFFGWLADKLGRKRV 88
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1293418642  92 LLWSVALFALFSLA-GAVAQSPSQLALM-----RFLTGLGLGAVMPNCVTLVAEYMPERRKGVMITLMYSGFNVGSGLGG 165
Cdd:TIGR00887  89 YGMELIIMIIATVAsGLSPGSSPKSVMAtlcfwRFWLGVGIGGDYPLSAIITSEFATKKWRGAMMAAVFAMQGFGILAGA 168
                         170
                  ....*....|
gi 1293418642 166 FIAAGLLSHY 175
Cdd:TIGR00887 169 IVALIVLAGF 178
MFS_SVOPL cd17442
Synaptic vesicle 2 (SV2)-related protein-like (SVOPL) of the Major Facilitator Superfamily; ...
46-204 2.02e-03

Synaptic vesicle 2 (SV2)-related protein-like (SVOPL) of the Major Facilitator Superfamily; Synaptic vesicle 2 (SV2)-related protein-like (SVOPL) or SVOP-like protein is a transporter-like protein that shares structural similarity to the solute carrier family 22 (SLC22), a large family of organic cation and anion transporters. It belongs to the Metazoan Synaptic Vesicle Glycoprotein 2 (SV2) and related small molecule transporter family (SV2-like) of the Major Facilitator Superfamily (MFS) of membrane transport proteins. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 341000 [Multi-domain]  Cd Length: 375  Bit Score: 40.18  E-value: 2.02e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1293418642  46 VAPALIEDWGISRAEMGPILGAAMFGVAIGALVAGPLSDRYGRKRILLWSVALFALFSLAGAVAQSPSQLALMRFLTGLG 125
Cdd:cd17442    23 VSPEIRCEWHLEDWQVALVTTMVFFGYMVFSILLGLLADRYGRWKILLLSFVWGAYFSLLTSFAPSYIWFVFLRCMVGCG 102
                          90       100       110       120       130       140       150
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1293418642 126 LGAVMPNCVtLVAEYMPERRKGVMITLMYSGFNVGSGLGGFIAAGLLSHYSWHsALIFGGVLPLVVLPFMIVMLPESAM 204
Cdd:cd17442   103 VSGHSQGLI-IKTEFLPTKYRGYMLPLSQIFWLAGSLLIIGLASVVIPTLGWR-WLIRFASIPGIILIVVFKFIPRTTL 179
MFS_OCT_plant cd17378
Plant organic cation/carnitine transporters of the Major Facilitator Superfamily of ...
71-198 2.23e-03

Plant organic cation/carnitine transporters of the Major Facilitator Superfamily of transporters; Plant organic cation/carnitine transporters (OCTs) are sequence-similar to their animal counterparts, which are broad-specificity transporters that play a critical role in the excretion and distribution of endogeneous organic cations and for the uptake, elimination and distribution of cationic drugs, toxins, and environmental waste products. Little is know about plant OCTs. In Arabidopsis, there are six genes belonging to this family that show distinct, organ-specific expression pattern of the individual genes. AtOCT1 has been found to affect root development and carnitine-related responses in Arabidopsis. AtOCT4, 5 and 6 are up-regulated during drought stress, AtOCT3 and 5 during cold stress and AtOCT5 and 6 during salt stress treatments. Plant OCTs belongs to the Solute carrier 22 (SLC22) family of organic cation/anion/zwitterion transporters of the Major Facilitator Superfamily (MFS) of membrane transport proteins. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340936 [Multi-domain]  Cd Length: 342  Bit Score: 40.03  E-value: 2.23e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1293418642  71 GVAIGALVAGPLSD-RYGRKRILLWSVALFALFSLAGAVAQSPSQLALMRFLTGLGLGAVMPNCVTLVAEYMPERRKGVM 149
Cdd:cd17378    45 GCLIGSGVLGHLADsSLGRKNLLFLSCLLMALSGIATAFSPNYWVYAFLRFLTGFGRSGIGTCALVLATEPVGPKWRGQV 124
                          90       100       110       120       130
                  ....*....|....*....|....*....|....*....|....*....|....*
gi 1293418642 150 ITLMYSGFNVG----SGLGGFIAAGLLSHYSWHS--ALIFGGVLPLVVLPFMIVM 198
Cdd:cd17378   125 GMSTFFFFVLGfmslPGIAYLNGSSWRVLYFWTSipALIYCILVYLFARRLLAVM 179
MFS_SLC45_SUC cd17313
Solute carrier family 45 and similar sugar transporters of the Major Facilitator Superfamily ...
73-186 2.36e-03

Solute carrier family 45 and similar sugar transporters of the Major Facilitator Superfamily of transporters; This group includes the solute carrier 45 (SLC45) family as well as plant sucrose transporters (SUCs or SUTs) and similar proteins such as Schizosaccharomyces pombe general alpha-glucoside permease. the SLC45 family is composed of four (A1-A4) vertebrate proteins as well as related insect proteins such as Drosophila sucrose transporter SCRT or Slc45-1. Members of this group transport sucrose and other sugars like maltose into the cell, with the concomitant uptake of protons (symport system). Plant sucrose transporters are crucial to carbon partitioning, playing a key role in phloem loading/unloading. They play a key role in loading and unloading of sucrose into the phloem and as a result, they control sucrose distribution throughout the whole plant and drive the osmotic flow system in the phloem. They also play a role in the exchange of sucrose between beneficial symbionts (mycorrhiza and Rhizobium) as well as pathogens such as nematodes and parasitic fungi. There are nine sucrose transporter genes in Arabidopsis and five in rice. Vertebrate SLC45 family proteins have been implicated in the regulation of glucose homoeostasis in the brain (SLC45A1), with skin and hair pigmentation (SLC45A2), and with prostate cancer and myelination (SLC45A3). Mutations in SLC45A2, also called MATP (membrane-associated transporter protein) or melanoma antigen AIM1, cause oculocutaneous albinism type 4 (OCA4), an autosomal recessive disorder of melanin biosynthesis that results in congenital hypopigmentation of ocular and cutaneous tissues. The SLC45 family and related sugar transporters belong to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340871 [Multi-domain]  Cd Length: 421  Bit Score: 40.30  E-value: 2.36e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1293418642  73 AIGALVAGPLSDRYGRKRILLWSVALFALFSLAGAVAQSPSQLALMRFLTGLGLGAVMPNCVTLVAEYMPE--RRKGVMI 150
Cdd:cd17313   295 LIFSLPIGKLGKKIGRKKVYLIGLVLFAVGMALMALVHNVTVALVLFALGGIGWATININPYPLVSDYHSEsgRGQGTDT 374
                          90       100       110       120
                  ....*....|....*....|....*....|....*....|
gi 1293418642 151 TLMYSGFN----VGSGLGGFIAAGLLSHYSWHSALIFGGV 186
Cdd:cd17313   375 GLLNLAISlaqiLVSLLAGPIIDVKGYGTVFPVAAVASFL 414
MFS_MFSD6 cd17335
Major facilitator superfamily domain-containing protein 6; Human Major facilitator superfamily ...
22-197 2.38e-03

Major facilitator superfamily domain-containing protein 6; Human Major facilitator superfamily domain-containing protein 6 (MFSD6) is also called macrophage MHC class I receptor 2 homolog (MMR2). It has been postulated as a possible receptor for human leukocyte antigen (HLA)-B62. MFSD6 is conserved through evolution and appeared before bilateral animals. It belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340893 [Multi-domain]  Cd Length: 375  Bit Score: 39.87  E-value: 2.38e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1293418642  22 QWNVLLLCFIIIMLDGYDAAVMGFVAPALiEDWGISRAEMGPILGAAMFGVAIGALVAGPLSDRYGRKRILLWSVALFAL 101
Cdd:cd17335   197 NPRVLAFLLVAFLMGFGHGLIYSFLFWHL-QDLGGSKTLIGLLWTVGVVSEIPFFFFSSRLIQRFGHVGLLYLGLLAYVV 275
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1293418642 102 FSLAGAVAQSPSQLALMRFLTGLGLGAVMPNCVTLVAEYMPERRKGVMITLMYSGFN-VGSGLGGFIAAGLLSHYSWHSA 180
Cdd:cd17335   276 RWLLYSFLENPWLVLPIELLHGLTFALVWAAAVSYASAAAPPGLRATAQGLLQGLYFgLGGGLGSLIGGYLYEAFGARTT 355
                         170
                  ....*....|....*..
gi 1293418642 181 LIFGGVLPLVVLPFMIV 197
Cdd:cd17335   356 FRFFAIAALAGLLAFFL 372
MFS cd06174
Major Facilitator Superfamily; The Major Facilitator Superfamily (MFS) is a large and diverse ...
261-431 3.91e-03

Major Facilitator Superfamily; The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of substrates including ions, sugar phosphates, drugs, neurotransmitters, nucleosides, amino acids, and peptides. They do so using the electrochemical potential of the transported substrates. Uniporters transport a single substrate, while symporters and antiporters transport two substrates in the same or in opposite directions, respectively, across membranes. MFS proteins are typically 400 to 600 amino acids in length, and the majority contain 12 transmembrane alpha helices (TMs) connected by hydrophilic loops. The N- and C-terminal halves of these proteins display weak similarity and may be the result of a gene duplication/fusion event. Based on kinetic studies and the structures of a few bacterial superfamily members, GlpT (glycerol-3-phosphate transporter), LacY (lactose permease), and EmrD (multidrug transporter), MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement. Bacterial members function primarily for nutrient uptake, and as drug-efflux pumps to confer antibiotic resistance. Some MFS proteins have medical significance in humans such as the glucose transporter Glut4, which is impaired in type II diabetes, and glucose-6-phosphate transporter (G6PT), which causes glycogen storage disease when mutated.


Pssm-ID: 349949 [Multi-domain]  Cd Length: 378  Bit Score: 39.33  E-value: 3.91e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1293418642 261 LWLTYFMGLFVIYLLNGWLPTILRSGGLSLQQAAMMTGLFQLGGPLGGILVGMLMDRASAKAVIAATYFLGCLCLLSQGL 340
Cdd:cd06174     1 LLLGFFLTGLARGLISPLLPALLQSFGLSASQLGLLFALFSLGYALLQPLAGLLADRFGRRPVLLLGLLLFALGALLFAF 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1293418642 341 MdFGSAALSVLIFISGMCINGAQNGLQAYSPAYYQTEIRATGVSWMHGIGRTGAILSSTLGGMLMLAVPGHSsiFLVLGL 420
Cdd:cd06174    81 A-PSFWLLLLGRFLLGLGSGLIDPAVLALIADLFPERERGRALGLLQAFGSVGGILGPLLGGILASSLGFGW--RAVFLI 157
                         170
                  ....*....|.
gi 1293418642 421 PACLAGICILL 431
Cdd:cd06174   158 AAALALLAAIL 168
PRK15403 PRK15403
multidrug efflux MFS transporter MdtM;
80-202 5.70e-03

multidrug efflux MFS transporter MdtM;


Pssm-ID: 237958 [Multi-domain]  Cd Length: 413  Bit Score: 39.04  E-value: 5.70e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1293418642  80 GPLSDRYGRKRILLWSVALFALFSLAGAVAQSPSQLALMRFLTGLGLGAVMPNCVTLVAEYMPERRKGVMITLMYSGFNV 159
Cdd:PRK15403   72 GPLSDRIGRRPVLITGALIFTLACAATLFTTSMTQFLIARFIQGTSICFIATVGYVTVQEAFGQTKGIKLMAIITSIVLV 151
                          90       100       110       120
                  ....*....|....*....|....*....|....*....|...
gi 1293418642 160 GSGLGGFIAAGLLSHYSWHSALIFGGVLPLVVLPFMIVMLPES 202
Cdd:PRK15403  152 APIIGPLSGAALMHFVHWKVLFAIIAVMGLIAFVGLLLAMPET 194
xylE PRK10077
D-xylose transporter XylE; Provisional
34-151 6.67e-03

D-xylose transporter XylE; Provisional


Pssm-ID: 182225 [Multi-domain]  Cd Length: 479  Bit Score: 38.91  E-value: 6.67e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1293418642  34 MLDGYDAAVMG---------FVAPaLIEDWGISRAEMGPILGAAMFGVAIGALVAGPLSDRYGRKRILLWSVALFALFSL 104
Cdd:PRK10077   22 LLFGYDTAVISgtveslntvFVAP-QNLSESAANSLLGFCVASALIGCIIGGALGGYCSNRFGRRDSLKIAAVLFFISAL 100
                          90       100       110       120       130
                  ....*....|....*....|....*....|....*....|....*....|....*....
gi 1293418642 105 AGAVAQ------SPSQLALM------RFLTGLGLGAVMPNCVTLVAEYMPERRKGVMIT 151
Cdd:PRK10077  101 GSAWPEfgftsiGPDNTGYVpefviyRIIGGIGVGLASMLSPMYIAEIAPAHIRGKLVS 159
MFS_3 pfam05977
Transmembrane secretion effector; This is a family of transport proteins. Members of this ...
62-221 7.62e-03

Transmembrane secretion effector; This is a family of transport proteins. Members of this family include a protein responsible for the secretion of the ferric chelator, enterobactin, and a protein involved in antibiotic resistance.


Pssm-ID: 399164 [Multi-domain]  Cd Length: 523  Bit Score: 38.58  E-value: 7.62e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1293418642  62 GPILGAAMFGVAIGALVAGPLSDRYGRKRILLWSVALFALFSLAGAVAQSPSQLALMRFLTGLGLGAVMPNCVTLVAEYM 141
Cdd:pfam05977 257 GILLGAVGVGAILGALSLPRLRERLGSDRLVLLASVVTALVLLSLALAPNLWLAIPVLLLGGAAWITALTTLNVAVQLSV 336
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1293418642 142 PERRKGVMITLMYSGFNVGSGLGGFIAAGLLSHYSWHSALIFGGV-LPLVVLPFMIVMLPE-SAMNMVAR-RLPGEQIAR 218
Cdd:pfam05977 337 PRWVRGRALAVYQTVFFGGMAAGSWLWGAVAEALSVTGALLGAAAaLLAGAAAGLRFRLPEgEAADLIPSnHWPEPLVAL 416

                  ...
gi 1293418642 219 ALN 221
Cdd:pfam05977 417 AVK 419
MFS_SLC22A31 cd17443
Solute carrier family 22, member 31 of the Major Facilitator Superfamily; Solute carrier ...
69-130 9.08e-03

Solute carrier family 22, member 31 of the Major Facilitator Superfamily; Solute carrier family 22, member 31 (SLC22A31) is an uncharacterized member of the SLC22 family of transporters, which includes organic cation transporters (OCTs), organic zwitterion/cation transporters (OCTNs), and organic anion transporters (OATs). SLC22 transporters interact with a variety of compounds that include drugs of abuse, environmental toxins, opioid analgesics, antidepressant and anxiolytic agents, and neurotransmitters and their metabolites. SLC22A31 belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 341001 [Multi-domain]  Cd Length: 343  Bit Score: 38.22  E-value: 9.08e-03
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1293418642  69 MFGVAIGALVAGPLSDRYGRKRILLWSVALFALFSLAGAVAQSPSQLALMRFLTGLGLGAVM 130
Cdd:cd17443    46 LLGWLLGYIILGAGCDRLGRRAAFVLSLVLATLLGVSVALSASPPTFLVLRLLQGGTLAGVF 107
MFS_SLCO_OATP cd17336
Solute carrier organic anion transporters of the Major Facilitator Superfamily of transporters; ...
25-195 9.12e-03

Solute carrier organic anion transporters of the Major Facilitator Superfamily of transporters; Solute carrier organic anion transporters (SLCOs) are also called organic anion transporting polypeptides (OATPs) or SLC21 (Solute carrier family 21) proteins. They are sodium-independent transporters that mediate the transport of a broad range of endo- as well as xenobiotics. Their substrates are mainly amphipathic organic anions with a molecular weight of more than 300Da, although there are a few known neutral or positively charged substrates. These include drugs including statins, angiotensin-converting enzyme inhibitors, angiotensin receptor blockers, antibiotics, antihistaminics, antihypertensives, and anticancer drugs. SLCOs/OATPs can be classified into 6 families (SLCO1-6 or OATP1-6) and each family may have subfamilies (e.g. OATP1A, OATP1B, OATP1C). Within the subfamilies, individual members are numbered according to the chronology of their identification and if there is already an ortholog known, they are given the same number. For example, the first SLCO identified, is rat OATP1A1 (encoded by the Slco1a1 gene). The second SLCO identified is the first human SLCO from the same subfamily and is called OATP1A2 (encoded by the SLCO1A2 gene). There are 11 human SLCOs/OATPs. SLCOs belong to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340894 [Multi-domain]  Cd Length: 411  Bit Score: 38.37  E-value: 9.12e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1293418642  25 VLLLCFIIIMldgYDAAVMGFVA--PALIEDWGISRAEMGPILGAAMFGVAIGALVAGPLSDRYGRKRILLWSVALFALF 102
Cdd:cd17336     5 VVLLCLLGLL---QGAVVSYFVStiTTIEKRFGLSSSQSGLILSANDIGQLLAVLLVSYFGGRGHRPRWIGIGSILMGLG 81
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1293418642 103 SLAGAVaqsPSQLALMRFLTGLGLGAVMPNCVTLVAEYMPERRKGVMITLMYSGFNVGSGLGGFIAAGLLSHY------- 175
Cdd:cd17336    82 CFLLAL---PHFLFVGQFLLGIGSSPLYTLGITYIDDNVSKKNSPLYIGILYAMRVLGPALGFLLGSFLLRIYvdfsrvp 158
                         170       180       190
                  ....*....|....*....|....*....|...
gi 1293418642 176 --------SWHSA-----LIFGGVLPLVVLPFM 195
Cdd:cd17336   159 lgitpddpRWIGAwwlgfLILGILLLIVSIPLF 191
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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