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Conserved domains on  [gi|1332876554|ref|WP_102838831|]
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phytoene desaturase [Stutzerimonas frequens]

Protein Classification

phytoene desaturase( domain architecture ID 11494953)

phytoene desaturase catalyzes the desaturation of phytoene to form zeta-carotene, all-trans-neurosporene, or lycopene, by the introduction of two, three, or four double bonds, respectively, during carotenoid biosynthesis

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
crtI_fam TIGR02734
phytoene desaturase; Phytoene is converted to lycopene by desaturation at four (two ...
 11-497 0e+00

phytoene desaturase; Phytoene is converted to lycopene by desaturation at four (two symmetrical pairs of) sites. This is achieved by two enzymes (crtP and crtQ) in cyanobacteria (Gloeobacter being an exception) and plants, but by a single enzyme in most other bacteria and in fungi. This single enzyme is called the bacterial-type phytoene desaturase, or CrtI. Most members of this family, part of the larger pfam01593, which also contains amino oxidases, are CrtI itself; it is likely that all members act on either phytoene or on related compounds such as dehydrosqualene, for carotenoid biosynthesis. [Biosynthesis of cofactors, prosthetic groups, and carriers, Other]


:

Pssm-ID: 274273 [Multi-domain]  Cd Length: 495  Bit Score: 823.06  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1332876554  11 AVVIGAGFGGLALAIRLQRAGIQTTLLEKRDKPGGRAYVYHDQGFTFDAGPTVITDPPALEELFSGAGKRMADYVELLPV 90
Cdd:TIGR02734   1 AVVIGAGFGGLALAIRLAAAGIPVTVVEQRDKPGGRAGVLEDDGFRFDTGPTVITMPEALEELFALAGRDLADYVELVPL 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1332876554  91 SPFYRLCWEDGYSFDYVNDQAQLDRQIHALNPRDVAGYQRFLAYSRAVYEEGYVKLGTVPFLSFRSMIGV-APQLAKLQA 169
Cdd:TIGR02734  81 DPFYRLCWEDGSQLDVDNDQEELEAQIARFNPGDVAGYRRFLDYAERVYREGYRKLGYVPFLSPRDLLRAdAPQLLALLA 160

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1332876554 170 WRNVYSMVANFVENDRLRQALSFHSLLVGGNPFETSSIYALIHALERQGGVWFPRGGTGALVQGMVRLFEDLGGRLELNA 249
Cdd:TIGR02734 161 WRSLYSKVARFFSDERLRQAFSFHALFLGGNPFRTPSIYALISALEREWGVWFPRGGTGALVAAMAKLAEDLGGELRLNA 240

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1332876554 250 EVARIELEAGRAKAVITGDGRRFDTDAVASNADVVNTYKQLLGHEERGRDEAKRLSGKRFSMSLFVIHFGLK---RRHEH 326
Cdd:TIGR02734 241 EVIRIETEGGRATAVHLADGERLDADAVVSNADLHHTYRRLLPNHPRRRYPAARLSRKRPSPSLFVLYFGLLgvdGHWPQ 320

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1332876554 327 LQHHTVCFGPRYRELIDEIFKRETLADDFSLYLHAPCVTDPSLAPEGCASHYVLAPVPHLGTADIDWAEEGPKYRDRIFE 406
Cdd:TIGR02734 321 LAHHTLCFGPRYKELFDEIFRKGRLAEDPSLYLHRPTVTDPSLAPPGCESLYVLAPVPHLGTADVDWSVEGPRYRDRILA 400

                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1332876554 407 YLDRHYMPGLRGDLVTHRIFTPQDFRDELNAHLGSAFSLEPILTQSAWFRPHNRDDVIPNLYIVGAGTHPGAGVPGVVGS 486
Cdd:TIGR02734 401 YLEERAIPGLRDRIVVERTFTPADFRDRYNAWLGSAFSLEHTLTQSAWFRPHNRDRKIDNLYLVGAGTHPGAGVPGVLGS 480

                         490
                  ....*....|.
gi 1332876554 487 AKATAGLMLED 497
Cdd:TIGR02734 481 AKATAKLMLGD 491
 
Name Accession Description Interval E-value
crtI_fam TIGR02734
phytoene desaturase; Phytoene is converted to lycopene by desaturation at four (two ...
 11-497 0e+00

phytoene desaturase; Phytoene is converted to lycopene by desaturation at four (two symmetrical pairs of) sites. This is achieved by two enzymes (crtP and crtQ) in cyanobacteria (Gloeobacter being an exception) and plants, but by a single enzyme in most other bacteria and in fungi. This single enzyme is called the bacterial-type phytoene desaturase, or CrtI. Most members of this family, part of the larger pfam01593, which also contains amino oxidases, are CrtI itself; it is likely that all members act on either phytoene or on related compounds such as dehydrosqualene, for carotenoid biosynthesis. [Biosynthesis of cofactors, prosthetic groups, and carriers, Other]


Pssm-ID: 274273 [Multi-domain]  Cd Length: 495  Bit Score: 823.06  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1332876554  11 AVVIGAGFGGLALAIRLQRAGIQTTLLEKRDKPGGRAYVYHDQGFTFDAGPTVITDPPALEELFSGAGKRMADYVELLPV 90
Cdd:TIGR02734   1 AVVIGAGFGGLALAIRLAAAGIPVTVVEQRDKPGGRAGVLEDDGFRFDTGPTVITMPEALEELFALAGRDLADYVELVPL 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1332876554  91 SPFYRLCWEDGYSFDYVNDQAQLDRQIHALNPRDVAGYQRFLAYSRAVYEEGYVKLGTVPFLSFRSMIGV-APQLAKLQA 169
Cdd:TIGR02734  81 DPFYRLCWEDGSQLDVDNDQEELEAQIARFNPGDVAGYRRFLDYAERVYREGYRKLGYVPFLSPRDLLRAdAPQLLALLA 160

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1332876554 170 WRNVYSMVANFVENDRLRQALSFHSLLVGGNPFETSSIYALIHALERQGGVWFPRGGTGALVQGMVRLFEDLGGRLELNA 249
Cdd:TIGR02734 161 WRSLYSKVARFFSDERLRQAFSFHALFLGGNPFRTPSIYALISALEREWGVWFPRGGTGALVAAMAKLAEDLGGELRLNA 240

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1332876554 250 EVARIELEAGRAKAVITGDGRRFDTDAVASNADVVNTYKQLLGHEERGRDEAKRLSGKRFSMSLFVIHFGLK---RRHEH 326
Cdd:TIGR02734 241 EVIRIETEGGRATAVHLADGERLDADAVVSNADLHHTYRRLLPNHPRRRYPAARLSRKRPSPSLFVLYFGLLgvdGHWPQ 320

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1332876554 327 LQHHTVCFGPRYRELIDEIFKRETLADDFSLYLHAPCVTDPSLAPEGCASHYVLAPVPHLGTADIDWAEEGPKYRDRIFE 406
Cdd:TIGR02734 321 LAHHTLCFGPRYKELFDEIFRKGRLAEDPSLYLHRPTVTDPSLAPPGCESLYVLAPVPHLGTADVDWSVEGPRYRDRILA 400

                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1332876554 407 YLDRHYMPGLRGDLVTHRIFTPQDFRDELNAHLGSAFSLEPILTQSAWFRPHNRDDVIPNLYIVGAGTHPGAGVPGVVGS 486
Cdd:TIGR02734 401 YLEERAIPGLRDRIVVERTFTPADFRDRYNAWLGSAFSLEHTLTQSAWFRPHNRDRKIDNLYLVGAGTHPGAGVPGVLGS 480

                         490
                  ....*....|.
gi 1332876554 487 AKATAGLMLED 497
Cdd:TIGR02734 481 AKATAKLMLGD 491
COG1233 COG1233
Phytoene dehydrogenase-related protein [Secondary metabolites biosynthesis, transport and ...
 9-498 0e+00

Phytoene dehydrogenase-related protein [Secondary metabolites biosynthesis, transport and catabolism];


Pssm-ID: 440846 [Multi-domain]  Cd Length: 491  Bit Score: 542.90  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1332876554   9 RRAVVIGAGFGGLALAIRLQRAGIQTTLLEKRDKPGGRAYVYHDQGFTFDAGPTVITDPPALEELFSGAGKrmADYVELL 88
Cdd:COG1233     4 YDVVVIGAGIGGLAAAALLARAGYRVTVLEKNDTPGGRARTFERPGFRFDVGPSVLTMPGVLERLFRELGL--EDYLELV 81

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1332876554  89 PVSPFYRLCWEDGYSFDYVNDQAQLDRQIHALNPRDVAGYQRFLAYSRAVYEEGYVKLGTVPFLSFRSMIG--VAPQLAK 166
Cdd:COG1233    82 PLDPAYRVPFPDGRALDLPRDLERTAAELERLFPGDAEAYRRFLAELRRLYDALLEDLLYRPLLSLRDLLRplALARLLR 161

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1332876554 167 LqAWRNVYSMVANFVENDRLRQALSFHSLLVGGNPFETSSIYALIHALERQGGVWFPRGGTGALVQGMVRLFEDLGGRLE 246
Cdd:COG1233   162 L-LLRSLRDLLRRYFKDPRLRALLAGQALYLGLSPDRTPALYALIAYLEYAGGVWYPKGGMGALADALARLAEELGGEIR 240

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1332876554 247 LNAEVARIELEAGRAKAVITGDGRRFDTDAVASNADVVNTYKQLLGHEERGRDEAKRLSGKRFSMSLFVIHFGLKRRHEH 326
Cdd:COG1233   241 TGAEVERILVEGGRATGVRLADGEEIRADAVVSNADPAHTYLRLLGEEALPARYRRRLERFRYSPSAFKLYLGLDGPLPG 320

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1332876554 327 LQHHTVCFGPRYRELIDEIFKREtLADDFSLYLHAPCVTDPSLAPEGCASHYVLAPVPHlGTADiDWAEEGPKYRDRIFE 406
Cdd:COG1233   321 LAHHTIHLSEDYEAAFDDIFRGR-LPEDPSLYVSIPSLTDPSLAPEGKHTLWVLVPVPY-GLED-AWDELKEEYAERILA 397

                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1332876554 407 YLDRHYmPGLRGDLVTHRIFTPQDFRDELNAHLGSAFSLEPILTQSAWFRPHNRDDVIPNLYIVGAGTHPGAGVPGVVGS 486
Cdd:COG1233   398 RLERYA-PGLRDRIVAREVLTPLDFERYLNLVGGAIYGGAHTLDQSAFFRPSNYRTPIPGLYLVGASTHPGGGVPGVLIS 476

                         490
                  ....*....|..
gi 1332876554 487 AKATAGLMLEDF 498
Cdd:COG1233   477 GRLAARRILKDL 488
Amino_oxidase pfam01593
Flavin containing amine oxidoreductase; This family consists of various amine oxidases, ...
 18-495 3.56e-46

Flavin containing amine oxidoreductase; This family consists of various amine oxidases, including maze polyamine oxidase (PAO)and various flavin containing monoamine oxidases (MAO). The aligned region includes the flavin binding site of these enzymes. The family also contains phytoene dehydrogenases and related enzymes. In vertebrates MAO plays an important role regulating the intracellular levels of amines via there oxidation; these include various neurotransmitters, neurotoxins and trace amines. In lower eukaryotes such as aspergillus and in bacteria the main role of amine oxidases is to provide a source of ammonium. PAOs in plants, bacteria and protozoa oxidase spermidine and spermine to an aminobutyral, diaminopropane and hydrogen peroxide and are involved in the catabolism of polyamines. Other members of this family include tryptophan 2-monooxygenase, putrescine oxidase, corticosteroid binding proteins and antibacterial glycoproteins.


Pssm-ID: 396255 [Multi-domain]  Cd Length: 446  Bit Score: 166.90  E-value: 3.56e-46
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1332876554  18 FGGLALAIRLQRAGIQTTLLEKRDKPGGRAYVYHDQGFTFDAGPTVIT-DPPALEELFSGAGkrMADYVELLPVSPFYRL 96
Cdd:pfam01593   1 LAGLAAARELLRAGHDVTVLEARDRVGGRIRTVRDDGFLIELGAMWFHgAQPPLLALLKELG--LEDRLVLPDPAPFYTV 78

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1332876554  97 CWEDGysfdyvndqaqldRQIHALNPRDVAGYQRFLAYSRAVYEEGYVKLGTVPFLS------FRSMIGVAPQLAKLQAW 170
Cdd:pfam01593  79 LFAGG-------------RRYPGDFRRVPAGWEGLLEFGRLLSIPEKLRLGLAALASdaldefDLDDFSLAESLLFLGRR 145

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1332876554 171 RNVYSMVANFVENDRLRQALSFHSLLVGGNPFE---TSSIYALIHALERQGGVWFPRGGTGALVQGMVRLFedLGGRLEL 247
Cdd:pfam01593 146 GPGDVEVWDRLIDPELFAALPFASGAFAGDPSElsaGLALPLLWALLGEGGSLLLPRGGLGALPDALAAQL--LGGDVRL 223

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1332876554 248 NAEVARIELEAGRAKaVITGDGRRFDTDAV--ASNADVVNTYKQLLGHEergrDEAKRLSGKRFSMSLFVIHFGLKRR-- 323
Cdd:pfam01593 224 NTRVRSIDREGDGVT-VTLTDGEVIEADAVivTVPLGVLKRILFTPPLP----PEKARAIRNLGYGPVNKVHLEFDRKfw 298

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1332876554 324 HEHLQHHTVCFGPryrelideifkrETLADDFSlylhapCVTDPSLAPEGcashYVLAPVPHLGTADIDWAEEGPKyRDR 403
Cdd:pfam01593 299 PDLGLLGLLSELL------------TGLGTAFS------WLTFPNRAPPG----KGLLLLVYVGPGDRARELEGLS-DEE 355

                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1332876554 404 IFEYLDRHyMPGLRGDLVTH-RIFTPQDFRdeLNAHLGSAFSLEPILTQSAWFRPHNRdDVIPNLYIVGAGTHPG--AGV 480
Cdd:pfam01593 356 LLQAVLRD-LRKLFGEEAPEpLRVLVSDWH--TDPWPRGSYSLPQYGPGHDDYRPLAR-TPDPGLFFAGEHTSTGypGTV 431

                         490
                  ....*....|....*
gi 1332876554 481 PGVVGSAKATAGLML 495
Cdd:pfam01593 432 EGAIESGRRAARAVL 446
PRK11883 PRK11883
protoporphyrinogen oxidase; Reviewed
 9-61 1.88e-09

protoporphyrinogen oxidase; Reviewed


Pssm-ID: 237009 [Multi-domain]  Cd Length: 451  Bit Score: 59.86  E-value: 1.88e-09
                          10        20        30        40        50
                  ....*....|....*....|....*....|....*....|....*....|....*
gi 1332876554   9 RRAVVIGAGFGGLALAIRLQRAG--IQTTLLEKRDKPGGRAYVYHDQGFTFDAGP 61
Cdd:PRK11883    1 KKVAIIGGGITGLSAAYRLHKKGpdADITLLEASDRLGGKIQTVRKDGFPIELGP 55
 
Name Accession Description Interval E-value
crtI_fam TIGR02734
phytoene desaturase; Phytoene is converted to lycopene by desaturation at four (two ...
 11-497 0e+00

phytoene desaturase; Phytoene is converted to lycopene by desaturation at four (two symmetrical pairs of) sites. This is achieved by two enzymes (crtP and crtQ) in cyanobacteria (Gloeobacter being an exception) and plants, but by a single enzyme in most other bacteria and in fungi. This single enzyme is called the bacterial-type phytoene desaturase, or CrtI. Most members of this family, part of the larger pfam01593, which also contains amino oxidases, are CrtI itself; it is likely that all members act on either phytoene or on related compounds such as dehydrosqualene, for carotenoid biosynthesis. [Biosynthesis of cofactors, prosthetic groups, and carriers, Other]


Pssm-ID: 274273 [Multi-domain]  Cd Length: 495  Bit Score: 823.06  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1332876554  11 AVVIGAGFGGLALAIRLQRAGIQTTLLEKRDKPGGRAYVYHDQGFTFDAGPTVITDPPALEELFSGAGKRMADYVELLPV 90
Cdd:TIGR02734   1 AVVIGAGFGGLALAIRLAAAGIPVTVVEQRDKPGGRAGVLEDDGFRFDTGPTVITMPEALEELFALAGRDLADYVELVPL 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1332876554  91 SPFYRLCWEDGYSFDYVNDQAQLDRQIHALNPRDVAGYQRFLAYSRAVYEEGYVKLGTVPFLSFRSMIGV-APQLAKLQA 169
Cdd:TIGR02734  81 DPFYRLCWEDGSQLDVDNDQEELEAQIARFNPGDVAGYRRFLDYAERVYREGYRKLGYVPFLSPRDLLRAdAPQLLALLA 160

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1332876554 170 WRNVYSMVANFVENDRLRQALSFHSLLVGGNPFETSSIYALIHALERQGGVWFPRGGTGALVQGMVRLFEDLGGRLELNA 249
Cdd:TIGR02734 161 WRSLYSKVARFFSDERLRQAFSFHALFLGGNPFRTPSIYALISALEREWGVWFPRGGTGALVAAMAKLAEDLGGELRLNA 240

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1332876554 250 EVARIELEAGRAKAVITGDGRRFDTDAVASNADVVNTYKQLLGHEERGRDEAKRLSGKRFSMSLFVIHFGLK---RRHEH 326
Cdd:TIGR02734 241 EVIRIETEGGRATAVHLADGERLDADAVVSNADLHHTYRRLLPNHPRRRYPAARLSRKRPSPSLFVLYFGLLgvdGHWPQ 320

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1332876554 327 LQHHTVCFGPRYRELIDEIFKRETLADDFSLYLHAPCVTDPSLAPEGCASHYVLAPVPHLGTADIDWAEEGPKYRDRIFE 406
Cdd:TIGR02734 321 LAHHTLCFGPRYKELFDEIFRKGRLAEDPSLYLHRPTVTDPSLAPPGCESLYVLAPVPHLGTADVDWSVEGPRYRDRILA 400

                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1332876554 407 YLDRHYMPGLRGDLVTHRIFTPQDFRDELNAHLGSAFSLEPILTQSAWFRPHNRDDVIPNLYIVGAGTHPGAGVPGVVGS 486
Cdd:TIGR02734 401 YLEERAIPGLRDRIVVERTFTPADFRDRYNAWLGSAFSLEHTLTQSAWFRPHNRDRKIDNLYLVGAGTHPGAGVPGVLGS 480

                         490
                  ....*....|.
gi 1332876554 487 AKATAGLMLED 497
Cdd:TIGR02734 481 AKATAKLMLGD 491
COG1233 COG1233
Phytoene dehydrogenase-related protein [Secondary metabolites biosynthesis, transport and ...
 9-498 0e+00

Phytoene dehydrogenase-related protein [Secondary metabolites biosynthesis, transport and catabolism];


Pssm-ID: 440846 [Multi-domain]  Cd Length: 491  Bit Score: 542.90  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1332876554   9 RRAVVIGAGFGGLALAIRLQRAGIQTTLLEKRDKPGGRAYVYHDQGFTFDAGPTVITDPPALEELFSGAGKrmADYVELL 88
Cdd:COG1233     4 YDVVVIGAGIGGLAAAALLARAGYRVTVLEKNDTPGGRARTFERPGFRFDVGPSVLTMPGVLERLFRELGL--EDYLELV 81

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1332876554  89 PVSPFYRLCWEDGYSFDYVNDQAQLDRQIHALNPRDVAGYQRFLAYSRAVYEEGYVKLGTVPFLSFRSMIG--VAPQLAK 166
Cdd:COG1233    82 PLDPAYRVPFPDGRALDLPRDLERTAAELERLFPGDAEAYRRFLAELRRLYDALLEDLLYRPLLSLRDLLRplALARLLR 161

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1332876554 167 LqAWRNVYSMVANFVENDRLRQALSFHSLLVGGNPFETSSIYALIHALERQGGVWFPRGGTGALVQGMVRLFEDLGGRLE 246
Cdd:COG1233   162 L-LLRSLRDLLRRYFKDPRLRALLAGQALYLGLSPDRTPALYALIAYLEYAGGVWYPKGGMGALADALARLAEELGGEIR 240

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1332876554 247 LNAEVARIELEAGRAKAVITGDGRRFDTDAVASNADVVNTYKQLLGHEERGRDEAKRLSGKRFSMSLFVIHFGLKRRHEH 326
Cdd:COG1233   241 TGAEVERILVEGGRATGVRLADGEEIRADAVVSNADPAHTYLRLLGEEALPARYRRRLERFRYSPSAFKLYLGLDGPLPG 320

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1332876554 327 LQHHTVCFGPRYRELIDEIFKREtLADDFSLYLHAPCVTDPSLAPEGCASHYVLAPVPHlGTADiDWAEEGPKYRDRIFE 406
Cdd:COG1233   321 LAHHTIHLSEDYEAAFDDIFRGR-LPEDPSLYVSIPSLTDPSLAPEGKHTLWVLVPVPY-GLED-AWDELKEEYAERILA 397

                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1332876554 407 YLDRHYmPGLRGDLVTHRIFTPQDFRDELNAHLGSAFSLEPILTQSAWFRPHNRDDVIPNLYIVGAGTHPGAGVPGVVGS 486
Cdd:COG1233   398 RLERYA-PGLRDRIVAREVLTPLDFERYLNLVGGAIYGGAHTLDQSAFFRPSNYRTPIPGLYLVGASTHPGGGVPGVLIS 476

                         490
                  ....*....|..
gi 1332876554 487 AKATAGLMLEDF 498
Cdd:COG1233   477 GRLAARRILKDL 488
Amino_oxidase pfam01593
Flavin containing amine oxidoreductase; This family consists of various amine oxidases, ...
 18-495 3.56e-46

Flavin containing amine oxidoreductase; This family consists of various amine oxidases, including maze polyamine oxidase (PAO)and various flavin containing monoamine oxidases (MAO). The aligned region includes the flavin binding site of these enzymes. The family also contains phytoene dehydrogenases and related enzymes. In vertebrates MAO plays an important role regulating the intracellular levels of amines via there oxidation; these include various neurotransmitters, neurotoxins and trace amines. In lower eukaryotes such as aspergillus and in bacteria the main role of amine oxidases is to provide a source of ammonium. PAOs in plants, bacteria and protozoa oxidase spermidine and spermine to an aminobutyral, diaminopropane and hydrogen peroxide and are involved in the catabolism of polyamines. Other members of this family include tryptophan 2-monooxygenase, putrescine oxidase, corticosteroid binding proteins and antibacterial glycoproteins.


Pssm-ID: 396255 [Multi-domain]  Cd Length: 446  Bit Score: 166.90  E-value: 3.56e-46
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1332876554  18 FGGLALAIRLQRAGIQTTLLEKRDKPGGRAYVYHDQGFTFDAGPTVIT-DPPALEELFSGAGkrMADYVELLPVSPFYRL 96
Cdd:pfam01593   1 LAGLAAARELLRAGHDVTVLEARDRVGGRIRTVRDDGFLIELGAMWFHgAQPPLLALLKELG--LEDRLVLPDPAPFYTV 78

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1332876554  97 CWEDGysfdyvndqaqldRQIHALNPRDVAGYQRFLAYSRAVYEEGYVKLGTVPFLS------FRSMIGVAPQLAKLQAW 170
Cdd:pfam01593  79 LFAGG-------------RRYPGDFRRVPAGWEGLLEFGRLLSIPEKLRLGLAALASdaldefDLDDFSLAESLLFLGRR 145

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1332876554 171 RNVYSMVANFVENDRLRQALSFHSLLVGGNPFE---TSSIYALIHALERQGGVWFPRGGTGALVQGMVRLFedLGGRLEL 247
Cdd:pfam01593 146 GPGDVEVWDRLIDPELFAALPFASGAFAGDPSElsaGLALPLLWALLGEGGSLLLPRGGLGALPDALAAQL--LGGDVRL 223

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1332876554 248 NAEVARIELEAGRAKaVITGDGRRFDTDAV--ASNADVVNTYKQLLGHEergrDEAKRLSGKRFSMSLFVIHFGLKRR-- 323
Cdd:pfam01593 224 NTRVRSIDREGDGVT-VTLTDGEVIEADAVivTVPLGVLKRILFTPPLP----PEKARAIRNLGYGPVNKVHLEFDRKfw 298

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1332876554 324 HEHLQHHTVCFGPryrelideifkrETLADDFSlylhapCVTDPSLAPEGcashYVLAPVPHLGTADIDWAEEGPKyRDR 403
Cdd:pfam01593 299 PDLGLLGLLSELL------------TGLGTAFS------WLTFPNRAPPG----KGLLLLVYVGPGDRARELEGLS-DEE 355

                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1332876554 404 IFEYLDRHyMPGLRGDLVTH-RIFTPQDFRdeLNAHLGSAFSLEPILTQSAWFRPHNRdDVIPNLYIVGAGTHPG--AGV 480
Cdd:pfam01593 356 LLQAVLRD-LRKLFGEEAPEpLRVLVSDWH--TDPWPRGSYSLPQYGPGHDDYRPLAR-TPDPGLFFAGEHTSTGypGTV 431

                         490
                  ....*....|....*
gi 1332876554 481 PGVVGSAKATAGLML 495
Cdd:pfam01593 432 EGAIESGRRAARAVL 446
HemY COG1232
Protoporphyrinogen oxidase HemY/PPOX [Coenzyme transport and metabolism]; Protoporphyrinogen ...
 9-491 2.96e-21

Protoporphyrinogen oxidase HemY/PPOX [Coenzyme transport and metabolism]; Protoporphyrinogen oxidase HemY/PPOX is part of the Pathway/BioSystem: Heme biosynthesis


Pssm-ID: 440845 [Multi-domain]  Cd Length: 443  Bit Score: 96.05  E-value: 2.96e-21
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1332876554   9 RRAVVIGAGFGGLALAIRLQRAGIQTTLLEKRDKPGGRAYVYHDQGFTFDAGP-TVITDPPALEELFSGAGkrMADyvEL 87
Cdd:COG1232     2 KRVAVIGGGIAGLTAAYRLAKAGHEVTVLEASDRVGGLIRTVEVDGFRIDRGPhSFLTRDPEVLELLRELG--LGD--EL 77

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1332876554  88 LPVSPFYRLCWEDGYSFDYVNDQAQLDRQIHaLNPRDVAGYQR-FLAYSRAVYEEgyvklgtVPFLSF-RSMIG------ 159
Cdd:COG1232    78 VWPNTRKSYIYYGGKLHPLPQGPLALLRSPL-LSLAGKLRALLeLLAPRRPPGED-------ESLAEFvRRRFGrevyer 149

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1332876554 160 -VAPQLAKlqawrnVYS-----MVANFVENdRLRQALSFHSLLVGGnpfetssIYALIHALERQGGVWFPRGGTGALVQG 233
Cdd:COG1232   150 lVEPLLEG------VYAgdpdeLSADWAFP-RLKRLELEHGSLIKG-------ALALRKGAKAGEVFGYLRGGLGTLVEA 215

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1332876554 234 MVRLFEDlgGRLELNAEVARIELEAGRaKAVITGDGRRFDTDAVASNADvVNTYKQLLGHEErgRDEAKRLSGKRFSmSL 313
Cdd:COG1232   216 LAEALEA--GEIRLGTRVTAIEREGGG-WRVTTSDGETIEADAVVSATP-APALARLLAPLP--PEVAAALAGIPYA-SV 288

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1332876554 314 FVIHFGLKRrhEHLQHHtVCFG------PRYRelideiFKRETLADDFSlylhapcvtdPSLAPEGCasHYVLAPVPHLG 387
Cdd:COG1232   289 AVVALGFDR--PDLPPP-DGFGwlvprdEGVP------ILAVTFSSNKW----------PHRAPDGK--VLLRLEVGGAG 347

                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1332876554 388 TADIdWAEEGPKYRDRIFEYLDRHYmpGLRGDLVTHRIFT-----PQdfrdelnAHLGSAFSLEPILTQSAwfrphnrdd 462
Cdd:COG1232   348 DPEL-WQLSDEELVALALADLRKLL--GIDAEPVDTRVVRwpkayPQ-------YTVGHLERVAAIREALA--------- 408

                         490       500
                  ....*....|....*....|....*....
gi 1332876554 463 VIPNLYIVGAGtHPGAGVPGVVGSAKATA 491
Cdd:COG1232   409 ALPGLYLAGRA-YDGVGLPDCIRSGREAA 436
YobN COG1231
Monoamine oxidase [Amino acid transport and metabolism];
9-277 2.02e-19

Monoamine oxidase [Amino acid transport and metabolism];


Pssm-ID: 440844 [Multi-domain]  Cd Length: 440  Bit Score: 90.75  E-value: 2.02e-19
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1332876554   9 RRAVVIGAGFGGLALAIRLQRAGIQTTLLEKRDKPGGRAY--VYHDQGFTFDAGPtvitdppaleELFSGAGKRMADYVE 86
Cdd:COG1231     8 KDVVIVGAGLAGLAAARELRKAGLDVTVLEARDRVGGRVWtlRFGDDGLYAELGA----------MRIPPSHTNLLALAR 77

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1332876554  87 L--LPVSPFYRLCWEDGYSFD---YVNDQAQLDRQIHAlnpRDVAGYQRFLAYSRAVYEEGYVKLGTVPFLSFrsmigVA 161
Cdd:COG1231    78 ElgLPLEPFPNENGNALLYLGgkrVRAGEIAADLRGVA---ELLAKLLRALAAALDPWAHPAAELDRESLAEW-----LR 149

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1332876554 162 PQLAKLQAWRNVYSMVANFvendrlrqalsfhsllVGGNPFETSSIYAL--IHALERQGGVWFPRGGTGALVQgmvRLFE 239
Cdd:COG1231   150 RNGASPSARRLLGLLGAGE----------------YGADPDELSLLDLLryAASAGGGAQQFRIVGGMDQLPR---ALAA 210

                         250       260       270
                  ....*....|....*....|....*....|....*...
gi 1332876554 240 DLGGRLELNAEVARIELEAGRAKaVITGDGRRFDTDAV 277
Cdd:COG1231   211 ELGDRIRLGAPVTRIRQDGDGVT-VTTDDGGTVRADAV 247
COG3349 COG3349
Uncharacterized protein, contains NAD-binding domain and a Fe-S cluster [General function ...
 9-277 3.77e-19

Uncharacterized protein, contains NAD-binding domain and a Fe-S cluster [General function prediction only];


Pssm-ID: 442577 [Multi-domain]  Cd Length: 445  Bit Score: 89.91  E-value: 3.77e-19
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1332876554   9 RRAVVIGAGFGGLALAIRLQRAGIQTTLLEKRDKPGGRAYVYHDQ--GFTFDAGPtvitdppaleELFSGAGKRMADYVE 86
Cdd:COG3349     4 PRVVVVGGGLAGLAAAVELAEAGFRVTLLEARPRLGGRARSFPDPdtGLPIDNGQ----------HVLLGCYRNTLDLLR 73

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1332876554  87 LLPVSPfyRLCWEDGYSFDYVndqaqlDRQIHALNPRDVAGYQRFLAYSRavyeegyvklgTVPFLSFRSMIGVAPQLAK 166
Cdd:COG3349    74 RIGAAD--NLVGPEPLQFPLP------GGRRWTLRAPRLPAPLHLLRALL-----------RAPGLSLADRLALLRLLTA 134

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1332876554 167 LQAWR-------NVYSMVANFVENDRLRQALsFHSLLVGG-N-PFETSS------IYALIHALERQGG-VWFPRGGTGAL 230
Cdd:COG3349   135 CRERRwrelddiSVADWLRRHGQSPRLIRRL-WEPLLLAAlNtPPEQASarlaltVLRETLLAGPAASdLLVPRGPLSEL 213

                         250       260       270       280
                  ....*....|....*....|....*....|....*....|....*...
gi 1332876554 231 -VQGMVRLFEDLGGRLELNAEVARIELEAGRAKAVITGDGRRFDTDAV 277
Cdd:COG3349   214 fVDPALAYLEARGGEVRLGTRVRALEFDGGRVTGLVLADGETVPADAV 261
NAD_binding_8 pfam13450
NAD(P)-binding Rossmann-like domain;
13-74 5.26e-14

NAD(P)-binding Rossmann-like domain;


Pssm-ID: 433218 [Multi-domain]  Cd Length: 67  Bit Score: 66.79  E-value: 5.26e-14
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1332876554  13 VIGAGFGGLALAIRLQRAGIQTTLLEKRDKPGGRAYVYHDQGFTFDAGPTVI--TDPPALEELF 74
Cdd:pfam13450   1 IVGAGLAGLVAAALLAKRGFRVLVLEKRDRLGGNAYSYRVPGYVFDYGAHIFhgSDEPNVRDLL 64
DadA COG0665
Glycine/D-amino acid oxidase (deaminating) [Amino acid transport and metabolism];
9-281 9.04e-11

Glycine/D-amino acid oxidase (deaminating) [Amino acid transport and metabolism];


Pssm-ID: 440429 [Multi-domain]  Cd Length: 364  Bit Score: 63.39  E-value: 9.04e-11
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1332876554   9 RRAVVIGAGFGGLALAIRLQRAGIQTTLLEkRDKPGGRAyvyhdqgftfdagptvitdppaleelfSGAGkrmadyvell 88
Cdd:COG0665     3 ADVVVIGGGIAGLSTAYHLARRGLDVTVLE-RGRPGSGA---------------------------SGRN---------- 44

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1332876554  89 pvspfyrlcwedgysfdyvndQAQLdrqIHALNPRDVAGYQRFLAYSRAVYEEGYVKLGTVPFLSFRSMIGVAP---QLA 165
Cdd:COG0665    45 ---------------------AGQL---RPGLAALADRALVRLAREALDLWRELAAELGIDCDFRRTGVLYLARteaELA 100

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1332876554 166 KLQAWRnvysmvanfvendRLRQALSFHSLLVGGNpfETSSIYALIHALERQGGVWFPRGGT---GALVQGMVRLFEDLG 242
Cdd:COG0665   101 ALRAEA-------------EALRALGLPVELLDAA--ELREREPGLGSPDYAGGLYDPDDGHvdpAKLVRALARAARAAG 165

                         250       260       270       280
                  ....*....|....*....|....*....|....*....|.
gi 1332876554 243 GRLELNAEVARIELEAGRAKAVITGDGrRFDTDAV--ASNA 281
Cdd:COG0665   166 VRIREGTPVTGLEREGGRVTGVRTERG-TVRADAVvlAAGA 205
PRK11883 PRK11883
protoporphyrinogen oxidase; Reviewed
 9-61 1.88e-09

protoporphyrinogen oxidase; Reviewed


Pssm-ID: 237009 [Multi-domain]  Cd Length: 451  Bit Score: 59.86  E-value: 1.88e-09
                          10        20        30        40        50
                  ....*....|....*....|....*....|....*....|....*....|....*
gi 1332876554   9 RRAVVIGAGFGGLALAIRLQRAG--IQTTLLEKRDKPGGRAYVYHDQGFTFDAGP 61
Cdd:PRK11883    1 KKVAIIGGGITGLSAAYRLHKKGpdADITLLEASDRLGGKIQTVRKDGFPIELGP 55
CzcO COG2072
Predicted flavoprotein CzcO associated with the cation diffusion facilitator CzcD [Inorganic ...
 10-45 3.79e-08

Predicted flavoprotein CzcO associated with the cation diffusion facilitator CzcD [Inorganic ion transport and metabolism];


Pssm-ID: 441675 [Multi-domain]  Cd Length: 414  Bit Score: 55.64  E-value: 3.79e-08
                          10        20        30
                  ....*....|....*....|....*....|....*.
gi 1332876554  10 RAVVIGAGFGGLALAIRLQRAGIQTTLLEKRDKPGG 45
Cdd:COG2072     8 DVVVIGAGQAGLAAAYHLRRAGIDFVVLEKADDVGG 43
PLN02268 PLN02268
probable polyamine oxidase
 11-60 5.06e-08

probable polyamine oxidase


Pssm-ID: 177909 [Multi-domain]  Cd Length: 435  Bit Score: 55.08  E-value: 5.06e-08
                          10        20        30        40        50
                  ....*....|....*....|....*....|....*....|....*....|
gi 1332876554  11 AVVIGAGFGGLALAIRLQRAGIQTTLLEKRDKPGGRAYVYHDQGFTFDAG 60
Cdd:PLN02268    3 VIVIGGGIAGIAAARALHDASFKVTLLESRDRIGGRVHTDYSFGFPVDMG 52
DAO pfam01266
FAD dependent oxidoreductase; This family includes various FAD dependent oxidoreductases: ...
 10-267 1.59e-07

FAD dependent oxidoreductase; This family includes various FAD dependent oxidoreductases: Glycerol-3-phosphate dehydrogenase EC:1.1.99.5, Sarcosine oxidase beta subunit EC:1.5.3.1, D-alanine oxidase EC:1.4.99.1, D-aspartate oxidase EC:1.4.3.1.


Pssm-ID: 426168 [Multi-domain]  Cd Length: 339  Bit Score: 53.17  E-value: 1.59e-07
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1332876554  10 RAVVIGAGFGGLALAIRLQRAGIQTTLLEKRDKPGGRAyvyhdqgftfdagptvitdppaleelfSGA-GKRMADYVELL 88
Cdd:pfam01266   1 DVVVIGGGIVGLSTAYELARRGLSVTLLERGDDPGSGA---------------------------SGRnAGLIHPGLRYL 53

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1332876554  89 PVSPFYRLCWEdgySFDYVNDQAQlDRQIHAlnprdvagyqrflaysravyeeGYVKLGTVPflsfrsmIGVAPQLAKLQ 168
Cdd:pfam01266  54 EPSELARLALE---ALDLWEELEE-ELGIDC----------------------GFRRCGVLV-------LARDEEEEALE 100

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1332876554 169 AWrnVYSMVANFVENDRLRQAlsfhsllvggnpfETSSIYALIHALerQGGVWFPRGGT---GALVQGMVRLFEDLGGRL 245
Cdd:pfam01266 101 KL--LAALRRLGVPAELLDAE-------------ELRELEPLLPGL--RGGLFYPDGGHvdpARLLRALARAAEALGVRI 163

                         250       260
                  ....*....|....*....|..
gi 1332876554 246 ELNAEVARIELEAGRAKAVITG 267
Cdd:pfam01266 164 IEGTEVTGIEEEGGVWGVVTTG 185
COG3380 COG3380
Predicted NAD/FAD-dependent oxidoreductase [General function prediction only];
9-60 1.89e-07

Predicted NAD/FAD-dependent oxidoreductase [General function prediction only];


Pssm-ID: 442607 [Multi-domain]  Cd Length: 331  Bit Score: 52.96  E-value: 1.89e-07
                          10        20        30        40        50
                  ....*....|....*....|....*....|....*....|....*....|..
gi 1332876554   9 RRAVVIGAGFGGLALAIRLQRAGIQTTLLEKRDKPGGRAYVYHDQGFTFDAG 60
Cdd:COG3380     4 PDIAIIGAGIAGLAAARALQDAGHEVTVFEKSRGVGGRMATRRLDGGRFDHG 55
PRK07233 PRK07233
hypothetical protein; Provisional
 10-279 2.12e-07

hypothetical protein; Provisional


Pssm-ID: 235977 [Multi-domain]  Cd Length: 434  Bit Score: 53.35  E-value: 2.12e-07
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1332876554  10 RAVVIGAGFGGLALAIRLQRAGIQTTLLEKRDKPGGRAYVYHDQGFTFDAGPTVI--TD---PPALEELfsgagkRMADY 84
Cdd:PRK07233    1 KIAIVGGGIAGLAAAYRLAKRGHEVTVFEADDQLGGLAASFEFGGLPIERFYHHIfkSDealLELLDEL------GLEDK 74

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1332876554  85 VELLPVSpfyrlcweDGYsfdYVndqaqlDRQIHAL-NPRDVAGYQRFLAYSRavyeegyVKLGTVPFLSFRSMIGVApq 163
Cdd:PRK07233   75 LRWRETK--------TGY---YV------DGKLYPLgTPLELLRFPHLSLIDK-------FRLGLLTLLARRIKDWRA-- 128

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1332876554 164 LAKLQA--W------RNVYSMVanfvendrlrqalsFHSLLV---GGNPFETSS--IYALIHALERQGGVWF------PR 224
Cdd:PRK07233  129 LDKVPAeeWlrrwsgEGVYEVF--------------WEPLLEskfGDYADDVSAawLWSRIKRRGNRRYSLFgeklgyLE 194

                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|....*
gi 1332876554 225 GGTGALVQGMVRLFEDLGGRLELNAEVARIELEAGRAKAVITGDGRRfDTDAVAS 279
Cdd:PRK07233  195 GGFATLIDALAEAIEARGGEIRLGTPVTSVVIDGGGVTGVEVDGEEE-DFDAVIS 248
UbiH COG0654
2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases [Coenzyme ...
 9-54 5.18e-07

2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases [Coenzyme transport and metabolism, Energy production and conversion]; 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases is part of the Pathway/BioSystem: Ubiquinone biosynthesis


Pssm-ID: 440419 [Multi-domain]  Cd Length: 326  Bit Score: 51.48  E-value: 5.18e-07
                          10        20        30        40
                  ....*....|....*....|....*....|....*....|....*...
gi 1332876554   9 RRAVVIGAGFGGLALAIRLQRAGIQTTLLEKRD--KPGGRAYVYHDQG 54
Cdd:COG0654     4 TDVLIVGGGPAGLALALALARAGIRVTVVERAPppRPDGRGIALSPRS 51
PLN03000 PLN03000
amine oxidase
 12-65 1.84e-06

amine oxidase


Pssm-ID: 178578 [Multi-domain]  Cd Length: 881  Bit Score: 50.79  E-value: 1.84e-06
                          10        20        30        40        50
                  ....*....|....*....|....*....|....*....|....*....|....*...
gi 1332876554  12 VVIGAGFGGLALAIRLQRAGIQTTLLEKRDKPGGRAYVY----HDQGFTFDAGPTVIT 65
Cdd:PLN03000  188 VIVGAGLSGLAAARQLMRFGFKVTVLEGRKRPGGRVYTKkmeaNRVGAAADLGGSVLT 245
PRK06847 PRK06847
hypothetical protein; Provisional
 5-48 2.59e-06

hypothetical protein; Provisional


Pssm-ID: 235874 [Multi-domain]  Cd Length: 375  Bit Score: 49.49  E-value: 2.59e-06
                          10        20        30        40
                  ....*....|....*....|....*....|....*....|....
gi 1332876554   5 TGGVRRAVVIGAGFGGLALAIRLQRAGIQTTLLEKrdKPGGRAY 48
Cdd:PRK06847    1 MAAVKKVLIVGGGIGGLSAAIALRRAGIAVDLVEI--DPEWRVY 42
mnmC PRK01747
bifunctional tRNA (5-methylaminomethyl-2-thiouridine)(34)-methyltransferase MnmD/FAD-dependent ...
 9-47 5.56e-06

bifunctional tRNA (5-methylaminomethyl-2-thiouridine)(34)-methyltransferase MnmD/FAD-dependent 5-carboxymethylaminomethyl-2-thiouridine(34) oxidoreductase MnmC;


Pssm-ID: 234978 [Multi-domain]  Cd Length: 662  Bit Score: 49.07  E-value: 5.56e-06
                          10        20        30
                  ....*....|....*....|....*....|....*....
gi 1332876554   9 RRAVVIGAGFGGLALAIRLQRAGIQTTLLEKRDKPGGRA 47
Cdd:PRK01747  261 RDAAIIGGGIAGAALALALARRGWQVTLYEADEAPAQGA 299
PRK11749 PRK11749
dihydropyrimidine dehydrogenase subunit A; Provisional
 9-45 7.20e-06

dihydropyrimidine dehydrogenase subunit A; Provisional


Pssm-ID: 236967 [Multi-domain]  Cd Length: 457  Bit Score: 48.25  E-value: 7.20e-06
                          10        20        30
                  ....*....|....*....|....*....|....*..
gi 1332876554   9 RRAVVIGAGFGGLALAIRLQRAGIQTTLLEKRDKPGG 45
Cdd:PRK11749  141 KKVAVIGAGPAGLTAAHRLARKGYDVTIFEARDKAGG 177
HdrA COG1148
Heterodisulfide reductase, subunit A (polyferredoxin) [Energy production and conversion];
8-47 8.72e-06

Heterodisulfide reductase, subunit A (polyferredoxin) [Energy production and conversion];


Pssm-ID: 440762 [Multi-domain]  Cd Length: 563  Bit Score: 48.32  E-value: 8.72e-06
                          10        20        30        40
                  ....*....|....*....|....*....|....*....|
gi 1332876554   8 VRRAVVIGAGFGGLALAIRLQRAGIQTTLLEKRDKPGGRA 47
Cdd:COG1148   140 NKRALVIGGGIAGMTAALELAEQGYEVYLVEKEPELGGRA 179
PLN02976 PLN02976
amine oxidase
 9-65 1.49e-05

amine oxidase


Pssm-ID: 215527 [Multi-domain]  Cd Length: 1713  Bit Score: 47.94  E-value: 1.49e-05
                           10        20        30        40        50
                   ....*....|....*....|....*....|....*....|....*....|....*...
gi 1332876554    9 RRAVVIGAGFGGLALAIRLQRAGIQTTLLEKRDKPGGRAYVYHDQ-GFTFDAGPTVIT 65
Cdd:PLN02976   694 KKIIVVGAGPAGLTAARHLQRQGFSVTVLEARSRIGGRVYTDRSSlSVPVDLGASIIT 751
gltD PRK12810
glutamate synthase subunit beta; Reviewed
 3-45 3.46e-05

glutamate synthase subunit beta; Reviewed


Pssm-ID: 237213 [Multi-domain]  Cd Length: 471  Bit Score: 46.31  E-value: 3.46e-05
                          10        20        30        40
                  ....*....|....*....|....*....|....*....|...
gi 1332876554   3 QATGgvRRAVVIGAGFGGLALAIRLQRAGIQTTLLEKRDKPGG 45
Cdd:PRK12810  140 KRTG--KKVAVVGSGPAGLAAADQLARAGHKVTVFERADRIGG 180
GltD COG0493
NADPH-dependent glutamate synthase beta chain or related oxidoreductase [Amino acid transport ...
 3-45 5.78e-05

NADPH-dependent glutamate synthase beta chain or related oxidoreductase [Amino acid transport and metabolism, General function prediction only]; NADPH-dependent glutamate synthase beta chain or related oxidoreductase is part of the Pathway/BioSystem: Glutamine biosynthesis


Pssm-ID: 440259 [Multi-domain]  Cd Length: 434  Bit Score: 45.51  E-value: 5.78e-05
                          10        20        30        40
                  ....*....|....*....|....*....|....*....|...
gi 1332876554   3 QATGgvRRAVVIGAGFGGLALAIRLQRAGIQTTLLEKRDKPGG 45
Cdd:COG0493   118 PRTG--KKVAVVGSGPAGLAAAYQLARAGHEVTVFEALDKPGG 158
proto_IX_ox TIGR00562
protoporphyrinogen oxidase; This enzyme oxidizes protoporphyrinogen IX to protoporphyrin IX, a ...
 7-79 6.08e-05

protoporphyrinogen oxidase; This enzyme oxidizes protoporphyrinogen IX to protoporphyrin IX, a precursor of heme and chlorophyll. Bacillus subtilis HemY also has coproporphyrinogen III to coproporphyrin III oxidase activity in a heterologous expression system, although the role for this activity in vivo is unclear. This protein is a flavoprotein and has a beta-alpha-beta dinucleotide binding motif near the amino end. [Biosynthesis of cofactors, prosthetic groups, and carriers, Heme, porphyrin, and cobalamin]


Pssm-ID: 213540 [Multi-domain]  Cd Length: 462  Bit Score: 45.60  E-value: 6.08e-05
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1332876554   7 GVRRAVVIGAGFGGLALAIRLQR----AGIQTTLLEKRDKPGGRAYVYHDQGFTFDAGP-TVITDPPALEELFSGAGK 79
Cdd:TIGR00562   1 GKKHVVIIGGGISGLCAAYYLEKeipeLPVELTLVEASDRVGGKIQTVKEDGYLIERGPdSFLERKKSAPDLVKDLGL 78
PLN02576 PLN02576
protoporphyrinogen oxidase
 4-61 8.45e-05

protoporphyrinogen oxidase


Pssm-ID: 215314 [Multi-domain]  Cd Length: 496  Bit Score: 45.00  E-value: 8.45e-05
                          10        20        30        40        50
                  ....*....|....*....|....*....|....*....|....*....|....*....
gi 1332876554   4 ATGGVRRAVVIGAGFGGLALAIRLQRA-GIQTTLLEKRDKPGGRAYVYHDQGFTFDAGP 61
Cdd:PLN02576    8 AAASSKDVAVVGAGVSGLAAAYALASKhGVNVLVTEARDRVGGNITSVSEDGFIWEEGP 66
PRK12844 PRK12844
3-ketosteroid-delta-1-dehydrogenase; Reviewed
 12-109 1.09e-04

3-ketosteroid-delta-1-dehydrogenase; Reviewed


Pssm-ID: 183787 [Multi-domain]  Cd Length: 557  Bit Score: 44.75  E-value: 1.09e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1332876554  12 VVIGAGFGGLALAIRLQRAGIQTTLLEKRDKPGG---------------------RAYVYHDQGFTFDA--GPTVITDPP 68
Cdd:PRK12844   10 VVVGSGGGGMCAALAAADSGLEPLIVEKQDKVGGstamsggvlwlpnnplmkaagVPDSHEDALAYLDAvvGDQGPASSP 89

                          90       100       110       120
                  ....*....|....*....|....*....|....*....|.
gi 1332876554  69 ALEELFSGAGKRMADYVELLPVspfyRLCWEDGYSfDYVND 109
Cdd:PRK12844   90 ERREAYLRAGPAMVSFLEHQGM----RFARCEGWS-DYYPD 125
Pyr_redox_2 pfam07992
Pyridine nucleotide-disulphide oxidoreductase; This family includes both class I and class II ...
 12-277 1.82e-04

Pyridine nucleotide-disulphide oxidoreductase; This family includes both class I and class II oxidoreductases and also NADH oxidases and peroxidases. This domain is actually a small NADH binding domain within a larger FAD binding domain.


Pssm-ID: 400379 [Multi-domain]  Cd Length: 301  Bit Score: 43.46  E-value: 1.82e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1332876554  12 VVIGAGFGGLALAIRLQRAGIQTTLLE-KRDKPGGRAYVYHdqgfTFDAGPTVITDPPALEELFsgagKRMADYVELLPV 90
Cdd:pfam07992   4 VVIGGGPAGLAAALTLAQLGGKVTLIEdEGTCPYGGCVLSK----ALLGAAEAPEIASLWADLY----KRKEEVVKKLNN 75

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1332876554  91 SPFYRLcweDGYSFDYVNDQAQLdrqihaLNPRDVAGYQRFLAYSRAVyeegyVKLGTVPFLSfrSMIGVApqlaklqaw 170
Cdd:pfam07992  76 GIEVLL---GTEVVSIDPGAKKV------VLEELVDGDGETITYDRLV-----IATGARPRLP--PIPGVE--------- 130

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1332876554 171 RNVYSMVANFVENDRLRQALSFHSLLVGGNPF---ETSSIYA-------LIHALERqggvwFPRGGTGALVQGMVRLFED 240
Cdd:pfam07992 131 LNVGFLVRTLDSAEALRLKLLPKRVVVVGGGYigvELAAALAklgkevtLIEALDR-----LLRAFDEEISAALEKALEK 205

                         250       260       270
                  ....*....|....*....|....*....|....*..
gi 1332876554 241 LGGRLELNAEVARIELEAGRAKaVITGDGRRFDTDAV 277
Cdd:pfam07992 206 NGVEVRLGTSVKEIIGDGDGVE-VILKDGTEIDADLV 241
PLN02529 PLN02529
lysine-specific histone demethylase 1
 12-65 2.74e-04

lysine-specific histone demethylase 1


Pssm-ID: 178144 [Multi-domain]  Cd Length: 738  Bit Score: 43.73  E-value: 2.74e-04
                          10        20        30        40        50
                  ....*....|....*....|....*....|....*....|....*....|....*...
gi 1332876554  12 VVIGAGFGGLALAIRLQRAGIQTTLLEKRDKPGGRAYVY----HDQGFTFDAGPTVIT 65
Cdd:PLN02529  164 IIVGAGLAGLAAARQLLSFGFKVVVLEGRNRPGGRVYTQkmgrKGQFAAVDLGGSVIT 221
PLN02328 PLN02328
lysine-specific histone demethylase 1 homolog
 7-46 3.03e-04

lysine-specific histone demethylase 1 homolog


Pssm-ID: 215187 [Multi-domain]  Cd Length: 808  Bit Score: 43.44  E-value: 3.03e-04
                          10        20        30        40
                  ....*....|....*....|....*....|....*....|..
gi 1332876554   7 GVRRA--VVIGAGFGGLALAIRLQRAGIQTTLLEKRDKPGGR 46
Cdd:PLN02328  235 GVEPAnvVVVGAGLAGLVAARQLLSMGFKVVVLEGRARPGGR 276
FAD_binding_3 pfam01494
FAD binding domain; This domain is involved in FAD binding in a number of enzymes.
 12-89 5.83e-04

FAD binding domain; This domain is involved in FAD binding in a number of enzymes.


Pssm-ID: 396193 [Multi-domain]  Cd Length: 348  Bit Score: 41.93  E-value: 5.83e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1332876554  12 VVIGAGFGGLALAIRLQRAGIQTTLLEKRDK--PGGRAYVYHDQGF-TFDAGPTV-----ITDPPALEELFSGAGKRMAD 83
Cdd:pfam01494   5 LIVGGGPAGLMLALLLARAGVRVVLVERHATtsVLPRAHGLNQRTMeLLRQAGLEdrilaEGVPHEGMGLAFYNTRRRAD 84


                  ....*.
gi 1332876554  84 YVELLP 89
Cdd:pfam01494  85 LDFLTS 90
PRK07208 PRK07208
hypothetical protein; Provisional
 9-60 7.21e-04

hypothetical protein; Provisional


Pssm-ID: 235967 [Multi-domain]  Cd Length: 479  Bit Score: 42.18  E-value: 7.21e-04
                          10        20        30        40        50
                  ....*....|....*....|....*....|....*....|....*....|..
gi 1332876554   9 RRAVVIGAGFGGLALAIRLQRAGIQTTLLEKRDKPGGRAYVYHDQGFTFDAG 60
Cdd:PRK07208    5 KSVVIIGAGPAGLTAAYELLKRGYPVTVLEADPVVGGISRTVTYKGNRFDIG 56
FAD_binding_2 pfam00890
FAD binding domain; This family includes members that bind FAD. This family includes the ...
 11-45 9.73e-04

FAD binding domain; This family includes members that bind FAD. This family includes the flavoprotein subunits from succinate and fumarate dehydrogenase, aspartate oxidase and the alpha subunit of adenylylsulphate reductase.


Pssm-ID: 395718 [Multi-domain]  Cd Length: 398  Bit Score: 41.50  E-value: 9.73e-04
                          10        20        30
                  ....*....|....*....|....*....|....*
gi 1332876554  11 AVVIGAGFGGLALAIRLQRAGIQTTLLEKRDKPGG 45
Cdd:pfam00890   2 VLVIGGGLAGLAAALAAAEAGLKVAVVEKGQPFGG 36
SdhA COG1053
Succinate dehydrogenase/fumarate reductase, flavoprotein subunit [Energy production and ...
 12-45 1.35e-03

Succinate dehydrogenase/fumarate reductase, flavoprotein subunit [Energy production and conversion]; Succinate dehydrogenase/fumarate reductase, flavoprotein subunit is part of the Pathway/BioSystem: TCA cycle


Pssm-ID: 440673 [Multi-domain]  Cd Length: 443  Bit Score: 40.97  E-value: 1.35e-03
                          10        20        30
                  ....*....|....*....|....*....|....
gi 1332876554  12 VVIGAGFGGLALAIRLQRAGIQTTLLEKRDKPGG 45
Cdd:COG1053     7 VVVGSGGAGLRAALEAAEAGLKVLVLEKVPPRGG 40
FixC COG0644
Dehydrogenase (flavoprotein) [Energy production and conversion];
16-47 1.40e-03

Dehydrogenase (flavoprotein) [Energy production and conversion];


Pssm-ID: 440409 [Multi-domain]  Cd Length: 281  Bit Score: 40.72  E-value: 1.40e-03
                          10        20        30
                  ....*....|....*....|....*....|..
gi 1332876554  16 AGFGGLALAIRLQRAGIQTTLLEKRDKPGGRA 47
Cdd:COG0644     1 AGPAGSAAARRLARAGLSVLLLEKGSFPGDKI 32
Pyr_redox pfam00070
Pyridine nucleotide-disulphide oxidoreductase; This family includes both class I and class II ...
 10-43 2.44e-03

Pyridine nucleotide-disulphide oxidoreductase; This family includes both class I and class II oxidoreductases and also NADH oxidases and peroxidases. This domain is actually a small NADH binding domain within a larger FAD binding domain.


Pssm-ID: 425450 [Multi-domain]  Cd Length: 80  Bit Score: 36.80  E-value: 2.44e-03
                          10        20        30
                  ....*....|....*....|....*....|....
gi 1332876554  10 RAVVIGAGFGGLALAIRLQRAGIQTTLLEKRDKP 43
Cdd:pfam00070   1 RVVVVGGGYIGLELAGALARLGSKVTVVERRDRL 34
PRK12771 PRK12771
putative glutamate synthase (NADPH) small subunit; Provisional
 4-45 4.55e-03

putative glutamate synthase (NADPH) small subunit; Provisional


Pssm-ID: 237198 [Multi-domain]  Cd Length: 564  Bit Score: 39.47  E-value: 4.55e-03
                          10        20        30        40
                  ....*....|....*....|....*....|....*....|..
gi 1332876554   4 ATGgvRRAVVIGAGFGGLALAIRLQRAGIQTTLLEKRDKPGG 45
Cdd:PRK12771  135 DTG--KRVAVIGGGPAGLSAAYHLRRMGHAVTIFEAGPKLGG 174
TrxB COG0492
Thioredoxin reductase [Posttranslational modification, protein turnover, chaperones];
12-52 4.59e-03

Thioredoxin reductase [Posttranslational modification, protein turnover, chaperones];


Pssm-ID: 440258 [Multi-domain]  Cd Length: 305  Bit Score: 38.95  E-value: 4.59e-03
                          10        20        30        40
                  ....*....|....*....|....*....|....*....|.
gi 1332876554  12 VVIGAGFGGLALAIRLQRAGIQTTLLEkRDKPGGRAYVYHD 52
Cdd:COG0492     4 VIIGAGPAGLTAAIYAARAGLKTLVIE-GGEPGGQLATTKE 43
FadH2 COG0446
NADPH-dependent 2,4-dienoyl-CoA reductase, sulfur reductase, or a related oxidoreductase ...
 4-47 4.84e-03

NADPH-dependent 2,4-dienoyl-CoA reductase, sulfur reductase, or a related oxidoreductase [Lipid transport and metabolism];


Pssm-ID: 440215 [Multi-domain]  Cd Length: 322  Bit Score: 39.02  E-value: 4.84e-03
                          10        20        30        40
                  ....*....|....*....|....*....|....*....|....
gi 1332876554   4 ATGGVRRAVVIGAGFGGLALAIRLQRAGIQTTLLEKRDKPGGRA 47
Cdd:COG0446   120 KEFKGKRAVVIGGGPIGLELAEALRKRGLKVTLVERAPRLLGVL 163
YdhS COG4529
Uncharacterized NAD(P)/FAD-binding protein YdhS [General function prediction only];
5-48 5.01e-03

Uncharacterized NAD(P)/FAD-binding protein YdhS [General function prediction only];


Pssm-ID: 443597 [Multi-domain]  Cd Length: 466  Bit Score: 39.17  E-value: 5.01e-03
                          10        20        30        40
                  ....*....|....*....|....*....|....*....|....*...
gi 1332876554   5 TGGVRRAVVIGAGFGGLALAIRL---QRAGIQTTLLEKRDKPG-GRAY 48
Cdd:COG4529     2 TGARKRIAIIGGGASGTALAIHLlrrAPEPLRITLFEPRPELGrGVAY 49
PRK06753 PRK06753
hypothetical protein; Provisional
 13-43 5.31e-03

hypothetical protein; Provisional


Pssm-ID: 168661 [Multi-domain]  Cd Length: 373  Bit Score: 39.29  E-value: 5.31e-03
                          10        20        30
                  ....*....|....*....|....*....|.
gi 1332876554  13 VIGAGFGGLALAIRLQRAGIQTTLLEKRDKP 43
Cdd:PRK06753    5 IIGAGIGGLTAAALLQEQGHEVKVFEKNESV 35
NirB COG1251
NAD(P)H-nitrite reductase, large subunit [Energy production and conversion];
210-277 5.59e-03

NAD(P)H-nitrite reductase, large subunit [Energy production and conversion];


Pssm-ID: 440863 [Multi-domain]  Cd Length: 402  Bit Score: 38.97  E-value: 5.59e-03
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1332876554 210 LIHALERQGGVWFPRGGtGALVQgmvRLFEDLGGRLELNAEVARIElEAGRAKAVITGDGRRFDTDAV 277
Cdd:COG1251   170 VVERAPRLLPRQLDEEA-GALLQ---RLLEALGVEVRLGTGVTEIE-GDDRVTGVRLADGEELPADLV 232
PRK08274 PRK08274
FAD-dependent tricarballylate dehydrogenase TcuA;
222-277 5.73e-03

FAD-dependent tricarballylate dehydrogenase TcuA;


Pssm-ID: 236214 [Multi-domain]  Cd Length: 466  Bit Score: 39.09  E-value: 5.73e-03
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|
gi 1332876554 222 FPRGGTGALVQGMVRLFEDLGGRLELNAEVARIELEAGRAKAVIT----GDGRRFDTDAV 277
Cdd:PRK08274  125 FFWGGGKALVNALYRSAERLGVEIRYDAPVTALELDDGRFVGARAgsaaGGAERIRAKAV 184
Lpd COG1249
Dihydrolipoamide dehydrogenase (E3) component of pyruvate/2-oxoglutarate dehydrogenase complex ...
 12-45 5.76e-03

Dihydrolipoamide dehydrogenase (E3) component of pyruvate/2-oxoglutarate dehydrogenase complex or glutathione oxidoreductase [Energy production and conversion]; Dihydrolipoamide dehydrogenase (E3) component of pyruvate/2-oxoglutarate dehydrogenase complex or glutathione oxidoreductase is part of the Pathway/BioSystem: Glycine cleavagePyruvate oxidation


Pssm-ID: 440861 [Multi-domain]  Cd Length: 456  Bit Score: 39.30  E-value: 5.76e-03
                          10        20        30
                  ....*....|....*....|....*....|....
gi 1332876554  12 VVIGAGFGGLALAIRLQRAGIQTTLLEKrDKPGG 45
Cdd:COG1249     7 VVIGAGPGGYVAAIRAAQLGLKVALVEK-GRLGG 39
PLN02676 PLN02676
polyamine oxidase
 8-46 6.20e-03

polyamine oxidase


Pssm-ID: 215362 [Multi-domain]  Cd Length: 487  Bit Score: 38.93  E-value: 6.20e-03
                          10        20        30        40
                  ....*....|....*....|....*....|....*....|
gi 1332876554   8 VRRAVVIGAGFGGLALAIRLQRAGIQTTL-LEKRDKPGGR 46
Cdd:PLN02676   26 SPSVIIVGAGMSGISAAKTLSEAGIEDILiLEATDRIGGR 65
NirB COG1251
NAD(P)H-nitrite reductase, large subunit [Energy production and conversion];
1-47 6.72e-03

NAD(P)H-nitrite reductase, large subunit [Energy production and conversion];


Pssm-ID: 440863 [Multi-domain]  Cd Length: 402  Bit Score: 38.97  E-value: 6.72e-03
                          10        20        30        40
                  ....*....|....*....|....*....|....*....|....*..
gi 1332876554   1 MNQATGGVRRAVVIGAGFGGLALAIRLQRAGIQTTLLEKRDKPGGRA 47
Cdd:COG1251   135 LRAALAPGKRVVVIGGGLIGLEAAAALRKRGLEVTVVERAPRLLPRQ 181
PRK06370 PRK06370
FAD-containing oxidoreductase;
11-41 6.77e-03

FAD-containing oxidoreductase;


Pssm-ID: 235787 [Multi-domain]  Cd Length: 463  Bit Score: 39.03  E-value: 6.77e-03
                          10        20        30
                  ....*....|....*....|....*....|.
gi 1332876554  11 AVVIGAGFGGLALAIRLQRAGIQTTLLEKRD 41
Cdd:PRK06370    8 AIVIGAGQAGPPLAARAAGLGMKVALIERGL 38
PRK08163 PRK08163
3-hydroxybenzoate 6-monooxygenase;
8-44 9.26e-03

3-hydroxybenzoate 6-monooxygenase;


Pssm-ID: 181262 [Multi-domain]  Cd Length: 396  Bit Score: 38.48  E-value: 9.26e-03
                          10        20        30
                  ....*....|....*....|....*....|....*..
gi 1332876554   8 VRRAVVIGAGFGGLALAIRLQRAGIQTTLLEKRDKPG 44
Cdd:PRK08163    4 VTPVLIVGGGIGGLAAALALARQGIKVKLLEQAAEIG 40
FAD_oxidored pfam12831
FAD dependent oxidoreductase; This family of proteins contains FAD dependent oxidoreductases ...
 12-45 9.92e-03

FAD dependent oxidoreductase; This family of proteins contains FAD dependent oxidoreductases and related proteins.


Pssm-ID: 432816 [Multi-domain]  Cd Length: 420  Bit Score: 38.36  E-value: 9.92e-03
                          10        20        30
                  ....*....|....*....|....*....|....
gi 1332876554  12 VVIGAGFGGLALAIRLQRAGIQTTLLEKRDKPGG 45
Cdd:pfam12831   3 VVVGGGPAGVAAAIAAARAGAKVLLVERRGFLGG 36
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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