stage V sporulation protein AD essential for the uptake of the 1:1 chelate of pyridine-2,6-dicarboxylic acid (DPA(2,6)) and Ca(2+) into developing spores of the bacterium Bacillus subtilis
Stage V sporulation protein SpoVAD, subunit of dipicolinate uptake complex [Cell cycle control, ...
1-335
0e+00
Stage V sporulation protein SpoVAD, subunit of dipicolinate uptake complex [Cell cycle control, cell division, chromosome partitioning, Amino acid transport and metabolism];
:
Pssm-ID: 444539 Cd Length: 336 Bit Score: 664.92 E-value: 0e+00
Stage V sporulation protein SpoVAD, subunit of dipicolinate uptake complex [Cell cycle control, ...
1-335
0e+00
Stage V sporulation protein SpoVAD, subunit of dipicolinate uptake complex [Cell cycle control, cell division, chromosome partitioning, Amino acid transport and metabolism];
Pssm-ID: 444539 Cd Length: 336 Bit Score: 664.92 E-value: 0e+00
Stage V sporulation protein AD (SpoVAD); This family contains the bacterial stage V ...
4-333
0e+00
Stage V sporulation protein AD (SpoVAD); This family contains the bacterial stage V sporulation protein AD (SpoVAD), which is approximately 340 residues long. This is one of six proteins encoded by the spoVA operon, which is transcribed exclusively in the forespore at about the time of dipicolinic acid (DPA) synthesis in the mother cell. The functions of the proteins encoded by the spoVA operon are unknown, but it has been suggested they are involved in DPA transport during sporulation.
Pssm-ID: 400020 Cd Length: 329 Bit Score: 607.65 E-value: 0e+00
stage V sporulation protein AD; Bacillus and Clostridium species contain about 10 % ...
5-333
0e+00
stage V sporulation protein AD; Bacillus and Clostridium species contain about 10 % dipicolinic acid (pyridine-2,6-dicarboxylic acid) by weight. This protein family, SpoVAD, belongs to the spoVA operon that is suggested to act in the transport of dipicolinic acid (DPA) from the mother cell, where DPA is synthesized, to the forespore, a process essential to sporulation. Members of this protein family are found, so far, in exactly those species believed capable of endospore formation. [Cellular processes, Sporulation and germination]
Pssm-ID: 188254 Cd Length: 327 Bit Score: 548.91 E-value: 0e+00
Thiolase domain associated with sterol carrier protein (SCP)-x isoform and related proteins; ...
57-133
4.35e-05
Thiolase domain associated with sterol carrier protein (SCP)-x isoform and related proteins; SCP-2 has multiple roles in intracellular lipid circulation and metabolism. The N-terminal presequence in the SCP-x isoform represents a peroxisomal 3-ketacyl-Coa thiolase specific for branched-chain acyl CoAs, which is proteolytically cleaved from the sterol carrier protein.
Pssm-ID: 238425 [Multi-domain] Cd Length: 375 Bit Score: 44.95 E-value: 4.35e-05
Stage V sporulation protein SpoVAD, subunit of dipicolinate uptake complex [Cell cycle control, ...
1-335
0e+00
Stage V sporulation protein SpoVAD, subunit of dipicolinate uptake complex [Cell cycle control, cell division, chromosome partitioning, Amino acid transport and metabolism];
Pssm-ID: 444539 Cd Length: 336 Bit Score: 664.92 E-value: 0e+00
Stage V sporulation protein AD (SpoVAD); This family contains the bacterial stage V ...
4-333
0e+00
Stage V sporulation protein AD (SpoVAD); This family contains the bacterial stage V sporulation protein AD (SpoVAD), which is approximately 340 residues long. This is one of six proteins encoded by the spoVA operon, which is transcribed exclusively in the forespore at about the time of dipicolinic acid (DPA) synthesis in the mother cell. The functions of the proteins encoded by the spoVA operon are unknown, but it has been suggested they are involved in DPA transport during sporulation.
Pssm-ID: 400020 Cd Length: 329 Bit Score: 607.65 E-value: 0e+00
stage V sporulation protein AD; Bacillus and Clostridium species contain about 10 % ...
5-333
0e+00
stage V sporulation protein AD; Bacillus and Clostridium species contain about 10 % dipicolinic acid (pyridine-2,6-dicarboxylic acid) by weight. This protein family, SpoVAD, belongs to the spoVA operon that is suggested to act in the transport of dipicolinic acid (DPA) from the mother cell, where DPA is synthesized, to the forespore, a process essential to sporulation. Members of this protein family are found, so far, in exactly those species believed capable of endospore formation. [Cellular processes, Sporulation and germination]
Pssm-ID: 188254 Cd Length: 327 Bit Score: 548.91 E-value: 0e+00
Thiolase domain associated with sterol carrier protein (SCP)-x isoform and related proteins; ...
57-133
4.35e-05
Thiolase domain associated with sterol carrier protein (SCP)-x isoform and related proteins; SCP-2 has multiple roles in intracellular lipid circulation and metabolism. The N-terminal presequence in the SCP-x isoform represents a peroxisomal 3-ketacyl-Coa thiolase specific for branched-chain acyl CoAs, which is proteolytically cleaved from the sterol carrier protein.
Pssm-ID: 238425 [Multi-domain] Cd Length: 375 Bit Score: 44.95 E-value: 4.35e-05
Condensing enzymes; Family of enzymes that catalyze a (decarboxylating or non-decarboxylating) ...
55-230
4.34e-04
Condensing enzymes; Family of enzymes that catalyze a (decarboxylating or non-decarboxylating) Claisen-like condensation reaction. Members are share strong structural similarity, and are involved in the synthesis and degradation of fatty acids, and the production of polyketides, a diverse group of natural products.
Pssm-ID: 238201 [Multi-domain] Cd Length: 254 Bit Score: 41.28 E-value: 4.34e-04
3-oxoacyl-[acyl-carrier-protein] synthase III [Lipid transport and metabolism]; 3-oxoacyl- ...
60-187
2.55e-03
3-oxoacyl-[acyl-carrier-protein] synthase III [Lipid transport and metabolism]; 3-oxoacyl-[acyl-carrier-protein] synthase III is part of the Pathway/BioSystem: Fatty acid biosynthesis
Pssm-ID: 440101 [Multi-domain] Cd Length: 323 Bit Score: 39.32 E-value: 2.55e-03
"initiating" condensing enzymes are a subclass of decarboxylating condensing enzymes, ...
59-253
4.28e-03
"initiating" condensing enzymes are a subclass of decarboxylating condensing enzymes, including beta-ketoacyl [ACP] synthase, type III and polyketide synthases, type III, which include chalcone synthase and related enzymes. They are characterized by the utlization of CoA substrate primers, as well as the nature of their active site residues.
Pssm-ID: 238423 [Multi-domain] Cd Length: 324 Bit Score: 38.57 E-value: 4.28e-03
Database: CDSEARCH/cdd Low complexity filter: no Composition Based Adjustment: yes E-value threshold: 0.01
References:
Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
of the residues that compose this conserved feature have been mapped to the query sequence.
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